View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19563_low_43 (Length: 263)

Name: NF19563_low_43
Description: NF19563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19563_low_43
NF19563_low_43
[»] chr4 (58 HSPs)
chr4 (136-246)||(30249580-30249690)
chr4 (1-82)||(293198-293280)
chr4 (1-74)||(28196754-28196828)
chr4 (1-73)||(4239347-4239420)
chr4 (1-77)||(9380722-9380799)
chr4 (1-73)||(32703631-32703704)
chr4 (1-74)||(48405961-48406034)
chr4 (1-72)||(25161879-25161951)
chr4 (1-81)||(169005-169087)
chr4 (5-75)||(9023242-9023313)
chr4 (1-75)||(28196344-28196419)
chr4 (1-75)||(39744446-39744521)
chr4 (1-73)||(9380307-9380380)
chr4 (1-74)||(26207360-26207433)
chr4 (13-76)||(23539838-23539900)
chr4 (1-74)||(9023661-9023735)
chr4 (1-73)||(169420-169493)
chr4 (1-73)||(23540233-23540306)
chr4 (1-84)||(39744019-39744103)
chr4 (1-72)||(43292038-43292110)
chr4 (1-75)||(292780-292855)
chr4 (1-74)||(26207727-26207801)
chr4 (1-74)||(32703224-32703298)
chr4 (1-59)||(44468904-44468962)
chr4 (1-73)||(39086604-39086677)
chr4 (1-73)||(43292338-43292411)
chr4 (1-70)||(48406366-48406435)
chr4 (1-76)||(50678776-50678852)
chr4 (11-76)||(56505690-56505756)
chr4 (20-75)||(3930480-3930535)
chr4 (1-74)||(36095816-36095890)
chr4 (1-70)||(36096456-36096526)
chr4 (18-75)||(11241659-11241716)
chr4 (1-70)||(12757770-12757839)
chr4 (1-73)||(50679405-50679478)
chr4 (18-93)||(24775781-24775857)
chr4 (5-73)||(39912472-39912540)
chr4 (1-59)||(25162294-25162352)
chr4 (1-74)||(43051233-43051307)
chr4 (18-73)||(16555815-16555871)
chr4 (20-72)||(22681576-22681628)
chr4 (4-75)||(12758188-12758259)
chr4 (20-74)||(18077202-18077257)
chr4 (20-72)||(8181992-8182046)
chr4 (20-74)||(35393776-35393830)
chr4 (20-69)||(49178816-49178866)
chr4 (20-75)||(16555513-16555569)
chr4 (18-72)||(11529169-11529224)
chr4 (20-74)||(13198906-13198961)
chr4 (1-75)||(45830177-45830252)
chr4 (23-73)||(7603422-7603472)
chr4 (1-74)||(39912053-39912126)
chr4 (5-70)||(43050610-43050676)
chr4 (20-74)||(8182172-8182228)
chr4 (20-72)||(8488482-8488534)
chr4 (84-125)||(18053290-18053333)
chr4 (84-125)||(21689940-21689983)
chr4 (22-77)||(22681881-22681937)
[»] chr1 (71 HSPs)
chr1 (1-73)||(27172116-27172188)
chr1 (1-74)||(20480167-20480240)
chr1 (1-77)||(999506-999582)
chr1 (1-73)||(20480593-20480665)
chr1 (1-76)||(9347532-9347607)
chr1 (1-75)||(32163024-32163099)
chr1 (1-73)||(9347126-9347199)
chr1 (1-73)||(48105097-48105170)
chr1 (1-76)||(28633717-28633793)
chr1 (1-73)||(49317752-49317824)
chr1 (1-73)||(50615602-50615674)
chr1 (1-73)||(50623430-50623502)
chr1 (1-71)||(50526453-50526524)
chr1 (1-74)||(4692414-4692488)
chr1 (1-86)||(6703875-6703961)
chr1 (4-73)||(20371336-20371406)
chr1 (1-70)||(50430062-50430132)
chr1 (1-70)||(999115-999184)
chr1 (1-73)||(13918446-13918519)
chr1 (1-73)||(26814694-26814767)
chr1 (1-73)||(49318147-49318219)
chr1 (1-75)||(26815100-26815175)
chr1 (1-70)||(42611188-42611258)
chr1 (1-70)||(46823846-46823916)
chr1 (1-74)||(46824259-46824333)
chr1 (1-70)||(48104681-48104751)
chr1 (1-74)||(20371039-20371111)
chr1 (1-72)||(13918848-13918920)
chr1 (1-73)||(21687448-21687520)
chr1 (1-76)||(28634138-28634214)
chr1 (1-73)||(49318424-49318496)
chr1 (1-75)||(6703458-6703533)
chr1 (12-74)||(19007734-19007796)
chr1 (1-73)||(21687025-21687098)
chr1 (1-73)||(47498301-47498372)
chr1 (13-75)||(19008743-19008806)
chr1 (1-75)||(44911023-44911098)
chr1 (1-74)||(27172522-27172596)
chr1 (1-70)||(42611595-42611665)
chr1 (18-72)||(47498493-47498547)
chr1 (1-74)||(49284408-49284482)
chr1 (20-71)||(17518602-17518653)
chr1 (1-60)||(44911418-44911477)
chr1 (1-79)||(50429650-50429729)
chr1 (20-74)||(13589659-13589713)
chr1 (18-74)||(8108991-8109048)
chr1 (4-53)||(32162750-32162799)
chr1 (18-74)||(39691998-39692055)
chr1 (1-70)||(44224100-44224169)
chr1 (18-73)||(48190771-48190827)
chr1 (18-77)||(48191353-48191413)
chr1 (20-74)||(47955305-47955360)
chr1 (25-74)||(50615239-50615289)
chr1 (25-74)||(50623067-50623117)
chr1 (1-70)||(50949164-50949234)
chr1 (24-73)||(1176717-1176766)
chr1 (1-73)||(6002237-6002310)
chr1 (1-77)||(50949546-50949623)
chr1 (20-76)||(41083211-41083267)
chr1 (21-75)||(39690792-39690847)
chr1 (20-74)||(22149402-22149455)
chr1 (4-73)||(4692022-4692091)
chr1 (1-71)||(6002875-6002946)
chr1 (20-78)||(8108716-8108775)
chr1 (20-75)||(17518301-17518356)
chr1 (24-73)||(41082909-41082959)
chr1 (22-70)||(22149701-22149750)
chr1 (20-76)||(31848192-31848249)
chr1 (18-74)||(33085670-33085727)
chr1 (1-46)||(49285036-49285081)
chr1 (20-75)||(47955608-47955664)
[»] chr7 (53 HSPs)
chr7 (1-74)||(13744214-13744287)
chr7 (1-76)||(37889240-37889316)
chr7 (1-73)||(48359320-48359392)
chr7 (1-75)||(10533032-10533107)
chr7 (1-74)||(37972377-37972451)
chr7 (1-73)||(9035274-9035347)
chr7 (1-70)||(22740572-22740641)
chr7 (1-73)||(37888833-37888906)
chr7 (1-84)||(20419305-20419389)
chr7 (1-75)||(20418886-20418961)
chr7 (1-75)||(37971958-37972033)
chr7 (1-75)||(18864383-18864457)
chr7 (1-74)||(22740155-22740229)
chr7 (4-73)||(3204669-3204737)
chr7 (1-77)||(42419009-42419086)
chr7 (1-74)||(3205074-3205148)
chr7 (1-74)||(17156966-17157040)
chr7 (1-70)||(18863970-18864040)
chr7 (1-73)||(13741557-13741630)
chr7 (6-79)||(36527378-36527451)
chr7 (1-74)||(29292921-29292995)
chr7 (1-75)||(48359639-48359713)
chr7 (1-75)||(9034865-9034941)
chr7 (11-74)||(16198968-16199032)
chr7 (1-74)||(44600116-44600190)
chr7 (1-73)||(29293327-29293400)
chr7 (1-73)||(36527779-36527852)
chr7 (6-74)||(38826899-38826968)
chr7 (1-73)||(44599489-44599562)
chr7 (1-75)||(13863311-13863386)
chr7 (1-74)||(13863938-13864011)
chr7 (1-74)||(42418590-42418664)
chr7 (20-75)||(9412325-9412381)
chr7 (1-75)||(46816292-46816367)
chr7 (20-73)||(3687656-3687710)
chr7 (1-75)||(8643747-8643822)
chr7 (26-73)||(27096047-27096094)
chr7 (26-73)||(27182209-27182256)
chr7 (21-75)||(6908211-6908265)
chr7 (18-75)||(13772639-13772697)
chr7 (20-73)||(13772901-13772955)
chr7 (18-72)||(18925320-18925373)
chr7 (21-70)||(6908485-6908534)
chr7 (20-72)||(8953889-8953941)
chr7 (20-83)||(9412013-9412077)
chr7 (21-73)||(23686421-23686473)
chr7 (21-73)||(35079960-35080012)
chr7 (26-75)||(23686723-23686773)
chr7 (24-70)||(27096346-27096392)
chr7 (24-70)||(27181911-27181957)
chr7 (20-73)||(3687353-3687408)
chr7 (18-73)||(5349731-5349784)
chr7 (22-69)||(38191387-38191435)
[»] chr5 (53 HSPs)
chr5 (1-74)||(37610201-37610274)
chr5 (1-74)||(37780319-37780392)
chr5 (1-75)||(12498565-12498640)
chr5 (1-72)||(22729421-22729492)
chr5 (1-75)||(26571145-26571220)
chr5 (1-79)||(10098922-10099000)
chr5 (1-75)||(43464173-43464247)
chr5 (1-70)||(43463759-43463828)
chr5 (1-75)||(12498909-12498984)
chr5 (1-70)||(21207229-21207299)
chr5 (1-73)||(19514525-19514599)
chr5 (1-75)||(26570727-26570802)
chr5 (5-74)||(19514948-19515018)
chr5 (1-73)||(3888239-3888312)
chr5 (1-73)||(22729008-22729080)
chr5 (1-79)||(34147491-34147570)
chr5 (1-70)||(2817152-2817222)
chr5 (1-71)||(2817556-2817626)
chr5 (1-73)||(37610599-37610671)
chr5 (1-70)||(3888643-3888713)
chr5 (1-74)||(25940520-25940594)
chr5 (1-75)||(41072195-41072269)
chr5 (1-73)||(10098519-10098592)
chr5 (1-73)||(18817592-18817665)
chr5 (1-74)||(34147140-34147212)
chr5 (1-73)||(37780723-37780796)
chr5 (1-72)||(25940995-25941067)
chr5 (1-75)||(11351408-11351483)
chr5 (1-75)||(18816950-18817025)
chr5 (18-75)||(22428932-22428989)
chr5 (18-75)||(22429194-22429251)
chr5 (5-76)||(31569904-31569975)
chr5 (1-74)||(11350807-11350880)
chr5 (1-70)||(30401885-30401955)
chr5 (20-74)||(41383167-41383221)
chr5 (18-74)||(26020449-26020506)
chr5 (1-74)||(42919304-42919377)
chr5 (24-75)||(16466746-16466798)
chr5 (18-73)||(18433015-18433071)
chr5 (20-75)||(25115755-25115811)
chr5 (20-75)||(25174847-25174903)
chr5 (4-70)||(11316717-11316784)
chr5 (18-73)||(34577162-34577217)
chr5 (1-70)||(11316955-11317025)
chr5 (21-73)||(23011079-23011131)
chr5 (20-75)||(25116061-25116117)
chr5 (20-75)||(25175151-25175207)
chr5 (18-70)||(34576870-34576922)
chr5 (20-74)||(18433316-18433371)
chr5 (20-86)||(33324838-33324905)
chr5 (22-67)||(16726084-16726130)
chr5 (18-70)||(9665560-9665611)
chr5 (21-73)||(9665828-9665879)
[»] chr3 (52 HSPs)
chr3 (1-74)||(40848520-40848593)
chr3 (1-77)||(48159893-48159970)
chr3 (1-73)||(3353128-3353200)
chr3 (1-73)||(42672978-42673050)
chr3 (1-73)||(42673277-42673349)
chr3 (1-77)||(40848942-40849019)
chr3 (1-77)||(3353532-3353608)
chr3 (1-73)||(24485441-24485513)
chr3 (1-70)||(27238881-27238951)
chr3 (1-74)||(53687887-53687961)
chr3 (1-74)||(26007181-26007254)
chr3 (1-73)||(48160314-48160387)
chr3 (1-85)||(36180544-36180627)
chr3 (1-75)||(27238463-27238538)
chr3 (1-71)||(22429577-22429647)
chr3 (1-73)||(10348780-10348853)
chr3 (1-70)||(24485025-24485094)
chr3 (1-73)||(53688284-53688356)
chr3 (1-75)||(36180971-36181046)
chr3 (1-70)||(53766166-53766236)
chr3 (4-73)||(44008385-44008454)
chr3 (1-73)||(47666316-47666389)
chr3 (1-73)||(21896492-21896564)
chr3 (1-72)||(22429159-22429231)
chr3 (1-73)||(42456176-42456247)
chr3 (11-75)||(42455788-42455853)
chr3 (11-74)||(53766570-53766634)
chr3 (1-75)||(26007600-26007675)
chr3 (21-75)||(8315083-8315137)
chr3 (20-74)||(47871122-47871176)
chr3 (13-75)||(47665909-47665972)
chr3 (5-75)||(1928419-1928489)
chr3 (21-78)||(8314008-8314066)
chr3 (20-73)||(20969019-20969073)
chr3 (1-72)||(10348480-10348552)
chr3 (18-84)||(14015962-14016028)
chr3 (20-73)||(17372298-17372352)
chr3 (21-77)||(18874878-18874935)
chr3 (1-73)||(44007967-44008040)
chr3 (20-72)||(17372594-17372645)
chr3 (18-75)||(21895655-21895714)
chr3 (21-76)||(45060872-45060928)
chr3 (20-73)||(10293909-10293963)
chr3 (20-73)||(13657445-13657499)
chr3 (20-73)||(18875191-18875245)
chr3 (20-70)||(26540694-26540744)
chr3 (20-77)||(47870819-47870877)
chr3 (21-73)||(1927772-1927825)
chr3 (20-73)||(9027033-9027086)
chr3 (57-86)||(28964451-28964480)
chr3 (24-73)||(42627550-42627599)
chr3 (18-73)||(3644781-3644837)
[»] chr2 (53 HSPs)
chr2 (1-74)||(37720203-37720277)
chr2 (1-72)||(16911250-16911321)
chr2 (1-72)||(18750107-18750178)
chr2 (1-70)||(8851151-8851221)
chr2 (1-74)||(8851563-8851637)
chr2 (1-70)||(26692801-26692871)
chr2 (1-77)||(7664244-7664321)
chr2 (1-73)||(7664654-7664727)
chr2 (1-74)||(7979984-7980057)
chr2 (1-73)||(16910827-16910900)
chr2 (1-73)||(17850978-17851050)
chr2 (1-81)||(6325328-6325409)
chr2 (13-84)||(5379952-5380024)
chr2 (13-75)||(5378659-5378722)
chr2 (1-66)||(6324924-6324990)
chr2 (1-75)||(7979565-7979638)
chr2 (2-71)||(19141446-19141515)
chr2 (1-70)||(26692399-26692469)
chr2 (1-70)||(19141830-19141898)
chr2 (1-70)||(41790494-41790563)
chr2 (1-76)||(2639463-2639539)
chr2 (1-75)||(26841585-26841660)
chr2 (1-75)||(41790893-41790968)
chr2 (1-74)||(2638819-2638893)
chr2 (1-70)||(5793450-5793520)
chr2 (1-73)||(38490822-38490894)
chr2 (1-51)||(17851383-17851433)
chr2 (20-77)||(30190919-30190977)
chr2 (18-74)||(18296691-18296748)
chr2 (1-73)||(26842219-26842292)
chr2 (1-72)||(18296077-18296149)
chr2 (6-82)||(18749717-18749793)
chr2 (20-74)||(20347464-20347519)
chr2 (1-70)||(7591204-7591274)
chr2 (20-81)||(11883615-11883677)
chr2 (20-70)||(32673143-32673193)
chr2 (18-74)||(24832330-24832387)
chr2 (22-73)||(6171156-6171207)
chr2 (20-74)||(6171456-6171511)
chr2 (20-73)||(11883926-11883980)
chr2 (24-73)||(43495609-43495658)
chr2 (27-74)||(43495308-43495356)
chr2 (20-71)||(18055050-18055100)
chr2 (22-73)||(40221313-40221364)
chr2 (20-70)||(40469729-40469780)
chr2 (20-70)||(43495484-43495535)
chr2 (20-74)||(26737481-26737534)
chr2 (20-73)||(26737781-26737835)
chr2 (22-74)||(6495723-6495776)
chr2 (1-46)||(7591831-7591876)
chr2 (22-75)||(17346037-17346090)
chr2 (20-76)||(20347160-20347217)
chr2 (20-70)||(18055169-18055221)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-74)||(19620-19693)
scaffold0176 (11-76)||(20034-20100)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-73)||(185255-185328)
scaffold0017 (1-72)||(184840-184912)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-73)||(744-816)
scaffold0460 (1-74)||(329-403)
[»] chr8 (56 HSPs)
chr8 (1-75)||(37396706-37396781)
chr8 (1-74)||(24473749-24473823)
chr8 (1-82)||(34498113-34498195)
chr8 (1-74)||(41662520-41662594)
chr8 (1-70)||(25439107-25439176)
chr8 (2-73)||(37397127-37397199)
chr8 (1-75)||(6199077-6199152)
chr8 (1-74)||(20861619-20861693)
chr8 (1-74)||(13936722-13936795)
chr8 (11-71)||(25438794-25438855)
chr8 (11-75)||(34498546-34498611)
chr8 (1-75)||(15444628-15444703)
chr8 (4-73)||(9623502-9623572)
chr8 (1-74)||(17431286-17431360)
chr8 (4-73)||(16169174-16169243)
chr8 (1-73)||(24473343-24473416)
chr8 (13-75)||(2856524-2856587)
chr8 (1-74)||(9823342-9823416)
chr8 (1-73)||(39724029-39724102)
chr8 (1-75)||(6198656-6198731)
chr8 (1-75)||(13026633-13026708)
chr8 (1-70)||(13027262-13027332)
chr8 (17-73)||(9623879-9623935)
chr8 (20-82)||(16929242-16929305)
chr8 (22-73)||(43162234-43162285)
chr8 (20-73)||(41662403-41662457)
chr8 (1-73)||(9822748-9822821)
chr8 (22-74)||(12281123-12281176)
chr8 (1-73)||(22851390-22851463)
chr8 (20-71)||(765736-765788)
chr8 (5-76)||(13937374-13937446)
chr8 (12-71)||(33726696-33726756)
chr8 (18-73)||(37752084-37752140)
chr8 (11-74)||(6092776-6092838)
chr8 (1-71)||(15444213-15444284)
chr8 (20-73)||(15156185-15156239)
chr8 (1-51)||(33727086-33727136)
chr8 (20-81)||(74678-74739)
chr8 (1-73)||(3307338-3307411)
chr8 (21-73)||(3463946-3463999)
chr8 (1-73)||(16169588-16169661)
chr8 (20-69)||(43162539-43162588)
chr8 (20-75)||(15155881-15155937)
chr8 (20-75)||(16928940-16928996)
chr8 (18-73)||(23123338-23123394)
chr8 (1-75)||(15042143-15042218)
chr8 (1-84)||(15043764-15043847)
chr8 (1-71)||(15442765-15442836)
chr8 (20-74)||(43246176-43246231)
chr8 (24-66)||(7127660-7127702)
chr8 (20-73)||(12281426-12281480)
chr8 (20-73)||(37752416-37752470)
chr8 (20-73)||(43245871-43245925)
chr8 (20-73)||(34313765-34313817)
chr8 (1-46)||(39723430-39723475)
chr8 (84-125)||(17652005-17652048)
[»] scaffold0069 (2 HSPs)
scaffold0069 (4-73)||(50490-50560)
scaffold0069 (1-74)||(50074-50146)
[»] chr6 (32 HSPs)
chr6 (1-73)||(10087839-10087912)
chr6 (1-74)||(29074353-29074426)
chr6 (1-74)||(29079117-29079190)
chr6 (1-74)||(29106926-29106999)
chr6 (1-73)||(33974280-33974353)
chr6 (5-74)||(7654533-7654603)
chr6 (11-73)||(22684349-22684411)
chr6 (11-73)||(22754657-22754719)
chr6 (1-70)||(32733977-32734047)
chr6 (1-76)||(33829617-33829693)
chr6 (1-74)||(13177037-13177110)
chr6 (1-73)||(33828990-33829063)
chr6 (1-72)||(22755070-22755142)
chr6 (20-75)||(10039674-10039729)
chr6 (20-75)||(13579651-13579706)
chr6 (20-70)||(3825530-3825580)
chr6 (1-73)||(2354409-2354481)
chr6 (4-74)||(2354794-2354865)
chr6 (20-77)||(3403989-3404047)
chr6 (20-74)||(21031978-21032032)
chr6 (18-73)||(3403717-3403773)
chr6 (24-84)||(30388051-30388111)
chr6 (4-60)||(32733571-32733627)
chr6 (11-71)||(403651-403711)
chr6 (18-70)||(31598726-31598778)
chr6 (20-74)||(18241853-18241908)
chr6 (20-83)||(23250582-23250645)
chr6 (20-73)||(11656782-11656836)
chr6 (20-74)||(33655115-33655169)
chr6 (21-74)||(31598274-31598327)
chr6 (1-69)||(13176624-13176692)
chr6 (20-60)||(30388362-30388402)
[»] scaffold0041 (2 HSPs)
scaffold0041 (1-74)||(38676-38750)
scaffold0041 (1-41)||(38284-38324)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-74)||(9904-9979)
scaffold0029 (12-80)||(10311-10378)
[»] scaffold0110 (2 HSPs)
scaffold0110 (20-75)||(45807-45862)
scaffold0110 (23-74)||(45536-45587)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-73)||(6776-6849)
scaffold0328 (1-73)||(6152-6225)
[»] scaffold0319 (2 HSPs)
scaffold0319 (20-73)||(6697-6750)
scaffold0319 (20-74)||(6393-6448)
[»] scaffold0802 (2 HSPs)
scaffold0802 (20-73)||(1420-1474)
scaffold0802 (20-73)||(1118-1172)
[»] scaffold0376 (2 HSPs)
scaffold0376 (13-74)||(7454-7515)
scaffold0376 (20-73)||(7600-7653)
[»] scaffold0002 (1 HSPs)
scaffold0002 (20-73)||(411923-411976)
[»] scaffold1221 (2 HSPs)
scaffold1221 (18-73)||(1511-1566)
scaffold1221 (22-70)||(1786-1834)
[»] scaffold0192 (1 HSPs)
scaffold0192 (20-74)||(25369-25424)
[»] scaffold0015 (1 HSPs)
scaffold0015 (22-73)||(17158-17209)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-74)||(205686-205740)
[»] scaffold0001 (4 HSPs)
scaffold0001 (20-73)||(438930-438984)
scaffold0001 (21-70)||(183367-183416)
scaffold0001 (28-74)||(183670-183717)
scaffold0001 (24-81)||(439203-439261)
[»] scaffold0598 (1 HSPs)
scaffold0598 (21-72)||(6877-6927)
[»] scaffold0535 (1 HSPs)
scaffold0535 (24-74)||(10011-10062)


Alignment Details
Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 30249690 - 30249580
Alignment:
Q  136 aattttaagaatttgcactcgaacggaaaaacaagttctctatgaagatccagccaccaatgttcttctcaaatctttttatgcacatcaccattttcga 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  30249690 aattttaagaatttgcactcgaacggaaaaacaagttctctatgaagatccagccaccaatgttcttctcaaatcttttcatgcacatctccattttaga 30249591  T
Q  236 tcgtgtcattt 246  Q
    |||||||||||    
T  30249590 tcgtgtcattt 30249580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 293198 - 293280
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcctattattta 82  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  293198 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagccttttattta 293280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28196754 - 28196828
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28196754 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 28196828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4239347 - 4239420
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4239347 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9380722 - 9380799
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctatt 77  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9380722 atcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctatt 9380799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32703631 - 32703704
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32703631 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48406034 - 48405961
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  48406034 atcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactatagggggaaaagtgcaattaagcct 48405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25161951 - 25161879
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagc 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25161951 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 169087 - 169005
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg--gaaaagtgcaattaagcctattattt 81  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  169087 atcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagccttttattt 169005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 9023313 - 9023242
Alignment:
Q  5 ctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9023313 ctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagccta 9023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28196419 - 28196344
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  28196419 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 28196344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39744446 - 39744521
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  39744446 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 39744521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9380380 - 9380307
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9380380 atcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26207433 - 26207360
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26207433 atcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcct 26207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 23539900 - 23539838
Alignment:
Q  13 aaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctat 76  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23539900 aaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaagcctat 23539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9023661 - 9023735
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  9023661 atcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 9023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 169420 - 169493
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  169420 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23540233 - 23540306
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  23540233 atcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 39744103 - 39744019
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcctattatttatt 84  Q
    ||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| | ||||||    
T  39744103 atcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagcctaatttttatt 39744019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43292110 - 43292038
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagc 72  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  43292110 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 292855 - 292780
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||| | |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  292855 atcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagccta 292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26207727 - 26207801
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  26207727 atcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcct 26207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32703298 - 32703224
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  32703298 atcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 32703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44468904 - 44468962
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaa 59  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44468904 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaa 44468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39086604 - 39086677
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  39086604 atcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaagcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43292338 - 43292411
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  43292338 atcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagcc 43292411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48406366 - 48406435
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  48406366 atcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattataggggggaaagtacaattaa 48406435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 50678852 - 50678776
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctat 76  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  50678852 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctat 50678776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 56505756 - 56505690
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctat 76  Q
    ||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  56505756 taaaaatatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctat 56505690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 3930480 - 3930535
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  3930480 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36095890 - 36095816
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||    
T  36095890 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 36095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36096456 - 36096526
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 70  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  36096456 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 11241659 - 11241716
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  11241659 atggggtgcaaaatcccacaattggcaaaagatagggggaaaagtacaattaagccta 11241716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12757839 - 12757770
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||| | |||||||||||||||||| ||||||||||  |||||||| |||||||    
T  12757839 atcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaactatagaaggaaaagtacaattaa 12757770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50679405 - 50679478
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  |||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||    
T  50679405 atcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 24775781 - 24775857
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcctattatttattattacaaat 93  Q
    |||||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||| || ||| ||| |||||||    
T  24775781 atggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcctttttttttttaatacaaat 24775857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 39912472 - 39912540
Alignment:
Q  5 ctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||| |||||||||||| ||||||||||||||||||  |||||||||  ||||||||| |||||||||    
T  39912472 ctcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagaaggaaaagtgtaattaagcc 39912540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25162294 - 25162352
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaa 59  Q
    ||||||||| ||||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  25162294 atcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatatagggggaaa 25162352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43051233 - 43051307
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| |||||  ||||||||||||||| |||||||||||||  ||||||| ||||| |||||||||||||    
T  43051233 atcgctcgtttaaaaacatggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcct 43051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 16555815 - 16555871
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||||| |||||  || |||||||||||||||||||||||    
T  16555815 atggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 22681628 - 22681576
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    |||||||||||||||||||||| ||||  |||||||| |||||||||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagataggggggaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 12758188 - 12758259
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    |||||| ||||||||||| |||||||| | || |||||||||||||||||   |||||||||||||| ||||    
T  12758188 gctcgtttaaaactatggcgtgcaaaaacacataattggcaaactataggaaaaaaagtgcaattaaaccta 12758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 18077202 - 18077257
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||||||||||    
T  18077202 ggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcct 18077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 8182046 - 8181992
Alignment:
Q  20 ggggtgcaaaatcgcacaattggc-aaactataggggg-aaaagtgcaattaagc 72  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 35393776 - 35393830
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    |||||||||| |||||||||| |||||  |||||| |||||||||||||||||||    
T  35393776 ggggtgcaaattcgcacaattagcaaaagatagggtgaaaagtgcaattaagcct 35393830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 49178816 - 49178866
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaatta 69  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  49178816 ggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 16555569 - 16555513
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||  ||||  ||| ||||||||||||||||||||||||    
T  16555569 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccta 16555513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 11529224 - 11529169
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagc 72  Q
    ||||||||||||||| |||||||||||||   ||||| ||||||||||||||||||    
T  11529224 atggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 13198906 - 13198961
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  13198906 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 13198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 45830177 - 45830252
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    ||||||| | |||||  |||||||| ||||||||||||||| ||||  ||||||| ||||||||| ||||||||||    
T  45830177 atcgctcttttaaaaacatggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagccta 45830252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 7603422 - 7603472
Alignment:
Q  23 gtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||  |||  ||||||| |||||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagataggggaaaaagtgcaattaagcc 7603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39912126 - 39912053
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcct 74  Q
    |||| |||| |||||||||||  || ||||||||||||||   ||||||||||| ||||||||||||||||||||    
T  39912126 atcgttcgtttaaaactatgga-tgtaaaatcgcacaattaataaactatagggaggaaaagtgcaattaagcct 39912053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 43050676 - 43050610
Alignment:
Q  5 ctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaa 70  Q
    ||||| |||||  ||||||||||||||||||||||||| |||  ||||||  |||||||||||||||    
T  43050676 ctcgtttaaaaacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaa 43050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 8182172 - 8182228
Alignment:
Q  20 ggggtgcaaaatcgcacaattggc-aaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| || |||  ||||||| |||||||||||||||||||    
T  8182172 ggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaagcct 8182228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 8488482 - 8488534
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    ||||||||||||||||||||| | |||  ||| || |||||||||||||||||    
T  8488482 ggggtgcaaaatcgcacaattagaaaaagataaggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 18053333 - 18053290
Alignment:
Q  84 tattacaaattacaagaaaaaa--ctaaggaggatttgaaatgc 125  Q
    ||||||||||||||||||||||  | ||||||||||||||||||    
T  18053333 tattacaaattacaagaaaaaaaacgaaggaggatttgaaatgc 18053290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 21689983 - 21689940
Alignment:
Q  84 tattacaaattacaagaaaaaa--ctaaggaggatttgaaatgc 125  Q
    ||||||||||||||||||||||  | ||||||||||||||||||    
T  21689983 tattacaaattacaagaaaaaaaacaaaggaggatttgaaatgc 21689940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 22681881 - 22681937
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcctatt 77  Q
    |||||||||| ||||||||  ||||  ||||| ||||||||||||||||||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcctatt 22681937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27172188 - 27172116
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172188 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20480240 - 20480167
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20480240 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 20480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 999506 - 999582
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctatt 77  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  999506 atcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctatagggggaaaagtgcaattaagcctatt 999582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20480593 - 20480665
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20480593 atcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9347532 - 9347607
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctat 76  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  9347532 atcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggggaaagtgcaattaagcctat 9347607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32163024 - 32163099
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32163024 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9347199 - 9347126
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9347199 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 48105097 - 48105170
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48105097 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28633793 - 28633717
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcctat 76  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  28633793 atcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagcctat 28633717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 49317824 - 49317752
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49317824 atcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50615602 - 50615674
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50615602 atcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50623430 - 50623502
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50623430 atcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50623502  T

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Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 50526453 - 50526524
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaag 71  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50526453 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

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Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4692414 - 4692488
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  4692414 atcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcct 4692488  T

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Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6703875 - 6703961
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctattatttattat 86  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||    
T  6703875 atcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagccaatattttattat 6703961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 20371336 - 20371406
Alignment:
Q  4 gctcgtctaaaactatgggg-tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20371336 gctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20371406  T

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Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50430062 - 50430132
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50430062 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 999184 - 999115
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  999184 atcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13918519 - 13918446
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  13918519 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaagcc 13918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26814767 - 26814694
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  26814767 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 26814694  T

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Target: chr1; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 49318147 - 49318219
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49318147 atcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 49318219  T

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Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26815100 - 26815175
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  26815100 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 26815175  T

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Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42611258 - 42611188
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42611258 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46823916 - 46823846
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46823916 atcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46824259 - 46824333
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  46824259 atcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcct 46824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48104751 - 48104681
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  48104751 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20371111 - 20371039
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  20371111 atcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggggg-aaagtgcaattaagcct 20371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13918848 - 13918920
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagc 72  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13918848 atcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21687448 - 21687520
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  21687448 atcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaattatagggggaaaagtgctattaagcc 21687520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28634138 - 28634214
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctat 76  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  28634138 atcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctat 28634214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 49318424 - 49318496
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  49318424 atcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagggggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6703533 - 6703458
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||||||| || |||||||||||||||||||    
T  6703533 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagccta 6703458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 19007796 - 19007734
Alignment:
Q  12 aaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19007796 aaaactatagggggcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcct 19007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21687098 - 21687025
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||  |||||||| |||||||||| |||||||||||||||||||||    
T  21687098 atcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47498372 - 47498301
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||| || |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  47498372 atcgcttgtttaaaactatgggatgcaaaattgcacaattggcaaactataggggg-aaagtgcaattaagcc 47498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 19008743 - 19008806
Alignment:
Q  13 aaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  19008743 aaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagccta 19008806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44911098 - 44911023
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  44911098 atcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagccta 44911023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27172522 - 27172596
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||    
T  27172522 atcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcct 27172596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42611595 - 42611665
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 70  Q
    |||||| || |||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  42611595 atcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 47498493 - 47498547
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  47498493 atggggtgcaaaaccgcacaattgacaaactatagggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49284482 - 49284408
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  49284482 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 49284408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 17518602 - 17518653
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 71  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  17518602 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44911418 - 44911477
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaa 60  Q
    ||||||||| | |||| || ||||||||||||||||||||||||||||||||||||||||    
T  44911418 atcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaa 44911477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50429729 - 50429650
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcctattat 79  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||| ||| | |||||||||| ||||||||||| ||||    
T  50429729 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagccttttat 50429650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 13589659 - 13589713
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 13589713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 8108991 - 8109048
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  8108991 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 32162799 - 32162750
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg 53  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  32162799 gctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagg 32162750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 39691998 - 39692055
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  39691998 atggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcct 39692055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44224100 - 44224169
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||||| ||||||||| ||||||||| |||||| | |||| |||||||||||||    
T  44224100 atcgctcgtttaaaactatgggatgcaaaatcacacaattggtaaactacatggggcaaagtgcaattaa 44224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 48190827 - 48190771
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  48190827 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 48191353 - 48191413
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctatt 77  Q
    ||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||    
T  48191353 atggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcctatt 48191413  T

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Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 47955360 - 47955305
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  47955360 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 47955305  T

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Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 50615289 - 50615239
Alignment:
Q  25 gcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50615239  T

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Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 50623117 - 50623067
Alignment:
Q  25 gcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50623067  T

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Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50949234 - 50949164
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaa 70  Q
    ||||||||| | |||| ||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  50949234 atcgctcgttttaaacaatgaggtgcaaaatcgcacaattggcagactataggagggaaaagtacaattaa 50949164  T

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Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 1176766 - 1176717
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 1176717  T

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Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6002310 - 6002237
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  ||||||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||    
T  6002310 atcgctcgtttaaaaacatggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

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Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 50949546 - 50949623
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctatt 77  Q
    ||||||||| | |||| ||| | |||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||    
T  50949546 atcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggggggaaagtgcaattatgcctatt 50949623  T

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Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 41083211 - 41083267
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctat 76  Q
    ||||||||||||||||||| |  ||||  ||||||||||||||||||||||||||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagatagggggaaaagtgcaattaagcctat 41083267  T

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Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 39690847 - 39690792
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||| ||||||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagccta 39690792  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 22149455 - 22149402
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||||||||||||    
T  22149455 ggggtgcaaaatcgcacaattaccaaag-atagggggaaaagtgcaattaagcct 22149402  T

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Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 4692091 - 4692022
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||| | ||||||| || |||||||||| |||||| ||||||||||| ||  ||||||||||||||||    
T  4692091 gctcgttttaaactataggatgcaaaatcgtacaattagcaaactatagaggagaaagtgcaattaagcc 4692022  T

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Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6002875 - 6002946
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaag 71  Q
    ||||||||| |||||  ||||||||||||||||||||||||  |||  ||||||  ||||||||||||||||    
T  6002875 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaag 6002946  T

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Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 8108775 - 8108716
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcctatta 78  Q
    |||||||||||||||||||||  ||||  |||||| |||||||||||||||| |||||||    
T  8108775 ggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaacctatta 8108716  T

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Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 17518356 - 17518301
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||  ||||  ||| ||||||| |||||||||||||||    
T  17518356 ggggtgcaaaatcgcacaattaacaaaagataaggggaaaggtgcaattaagccta 17518301  T

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Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 41082959 - 41082909
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||  |||||||| |||||| ||||||||||    
T  41082959 tgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaagcc 41082909  T

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Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 22149701 - 22149750
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 70  Q
    ||||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

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Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 31848192 - 31848249
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctat 76  Q
    |||||||||||||| ||||||  ||||  ||||||| |||||||||||||||||||||    
T  31848192 ggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagcctat 31848249  T

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Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 33085727 - 33085670
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcct 74  Q
    |||||||||||||||  ||||||| |||| ||||||| |||||||| |||||||||||    
T  33085727 atggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaattaagcct 33085670  T

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Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49285036 - 49285081
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaa 46  Q
    |||||| || |||||  |||||||||||||||||||||||||||||    
T  49285036 atcgcttgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 49285081  T

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Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 47955608 - 47955664
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||   |||  ||| ||||||||||||||||||||||||    
T  47955608 ggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

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Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13744214 - 13744287
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13744214 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 13744287  T

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Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37889240 - 37889316
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctat 76  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37889240 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctat 37889316  T

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Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 48359392 - 48359320
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48359392 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 48359320  T

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Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10533107 - 10533032
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10533107 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 10533032  T

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Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37972377 - 37972451
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37972377 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37972451  T

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Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9035274 - 9035347
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9035274 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

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Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22740572 - 22740641
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22740572 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

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Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37888906 - 37888833
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37888906 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37888833  T

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Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20419305 - 20419389
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctattatttatt 84  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||    
T  20419305 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccttttttttatt 20419389  T

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Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20418961 - 20418886
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  20418961 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccta 20418886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37972033 - 37971958
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  37972033 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagccta 37971958  T

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Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18864383 - 18864457
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18864383 atcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22740229 - 22740155
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  22740229 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 22740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 3204737 - 3204669
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3204737 gctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaagcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42419009 - 42419086
Alignment:
Q  1 atcgctcgtctaaaactatgggg-tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctatt 77  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  42419009 atcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactatagggggaaaagtgcaattaaacctatt 42419086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3205074 - 3205148
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  3205074 atcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 3205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17157040 - 17156966
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  17157040 atcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 17156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18864040 - 18863970
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  18864040 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13741630 - 13741557
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  13741630 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaagcc 13741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 36527451 - 36527378
Alignment:
Q  6 tcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattat 79  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  36527451 tcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaaaccttttat 36527378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29292995 - 29292921
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29292995 atcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 29292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 48359639 - 48359713
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||| | |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  48359639 atcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactataggggaaaaagtgcaattatgccta 48359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9034941 - 9034865
Alignment:
Q  1 atcgctcgtctaaaactatgggg-tgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9034941 atcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 9034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 16198968 - 16199032
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  16198968 taaaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcct 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44600116 - 44600190
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  44600116 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29293327 - 29293400
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| | |||| |||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  29293327 atcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 29293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36527779 - 36527852
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||| | ||||||| ||||||||||||    
T  36527779 atcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaagcc 36527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 38826899 - 38826968
Alignment:
Q  6 tcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  38826899 tcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcct 38826968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44599562 - 44599489
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  44599562 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13863386 - 13863311
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||    
T  13863386 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 13863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13863938 - 13864011
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||    
T  13863938 atcgctcgtttaaaaatatggggtgc-aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42418664 - 42418590
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||| || | ||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  42418664 atcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaagcct 42418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 9412325 - 9412381
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  9412325 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 9412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 46816292 - 46816367
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||| ||||||||||||||||||| |||||| |||  |||| ||| |||||||||||||||||||    
T  46816292 atcgctcgtttaaaaatatggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagccta 46816367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 3687656 - 3687710
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  3687656 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8643747 - 8643822
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagccta 75  Q
    ||||||||| ||| |  ||||||||||||||||||||||||| |||  ||||||  ||||||||||||||||||||    
T  8643747 atcgctcgtttaataacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagccta 8643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 27096094 - 27096047
Alignment:
Q  26 caaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  27096094 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 27096047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 27182209 - 27182256
Alignment:
Q  26 caaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  27182209 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 27182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 6908265 - 6908211
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||  |||   |||||||||||||||||||||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggggaaaagtgcaattaagccta 6908211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 13772697 - 13772639
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagccta 75  Q
    ||||||||||||||| ||||||| |||||  |||||| |||||||||||||||||||||    
T  13772697 atggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagccta 13772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 13772901 - 13772955
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||    
T  13772901 ggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 18925320 - 18925373
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||||||||||||    
T  18925320 atggggtgcaaaatcgcacaattagcaaaatata-gaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 8953889 - 8953941
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    |||||||||||| ||||||||  ||||  ||||||||||||||||||||||||    
T  8953889 ggggtgcaaaattgcacaattaacaaaagatagggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 9412077 - 9412013
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctattatttat 83  Q
    |||||||||||||||||||||  ||||  ||| ||||||||||||||||||||||| || |||||    
T  9412077 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccttttctttat 9412013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 23686473 - 23686421
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||| | |||||| |||||  |||||||||||||||||||||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagatagggggaaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 35080012 - 35079960
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||| | ||||||| |||||  |||||||||||||||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagatagggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 23686723 - 23686773
Alignment:
Q  26 caaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccta 75  Q
    ||||||||||||||| |||||  |||||||| |||||||||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccta 23686773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 27096346 - 27096392
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||| ||||  ||||||||||||||||||||||    
T  27096346 tgcaaaatcacacaattgacaaaagatagggggaaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 27181957 - 27181911
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||| ||||  ||||||||||||||||||||||    
T  27181957 tgcaaaatcacacaattgacaaaagatagggggaaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 3687408 - 3687353
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg--aaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||  ||||  ||||||||  |||||||||||||||||    
T  3687408 ggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 5349731 - 5349784
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||  ||||  |||||||  ||||||||||||||||    
T  5349731 atggggtgcaaaatcgcacaattaacaaaagatagggg--aaagtgcaattaagcc 5349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 38191435 - 38191387
Alignment:
Q  22 ggtgcaaaatcgcacaattggc-aaactatagggggaaaagtgcaatta 69  Q
    |||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagataggggaaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37610274 - 37610201
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37610274 atcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcct 37610201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37780392 - 37780319
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37780392 atcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcct 37780319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12498640 - 12498565
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12498640 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22729421 - 22729492
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22729421 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26571145 - 26571220
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26571145 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 26571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10098922 - 10099000
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattat 79  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  10098922 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaagtgcaattaaacctattat 10099000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 43464173 - 43464247
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43464173 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccta 43464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43463828 - 43463759
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43463828 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12498909 - 12498984
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12498909 atcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21207299 - 21207229
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21207299 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19514599 - 19514525
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag--ggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  19514599 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaagcc 19514525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26570802 - 26570727
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  26570802 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagccta 26570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 19514948 - 19515018
Alignment:
Q  5 ctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19514948 ctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 19515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3888312 - 3888239
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  3888312 atcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaagcc 3888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22729080 - 22729008
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  22729080 atcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34147491 - 34147570
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcctattat 79  Q
    ||||||||| |||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  34147491 atcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagccttttat 34147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2817222 - 2817152
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaa 70  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2817222 atcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2817556 - 2817626
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 71  Q
    ||||||||| ||||||||| || || |||||||||||||| ||||||||||||||||||||||||||||||    
T  2817556 atcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactatagggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37610599 - 37610671
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  37610599 atcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaagcc 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3888643 - 3888713
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||| || |||||||||||||||||    
T  3888643 atcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25940594 - 25940520
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  25940594 atcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagcct 25940520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41072195 - 41072269
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||| |||||| ||||    
T  41072195 atcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactataggaggaaaagtgtaattaaaccta 41072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10098592 - 10098519
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||| || |||||||||||||||||| ||||||||||| || |||||||||||||||||    
T  10098592 atcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagcc 10098519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18817592 - 18817665
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  18817592 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34147212 - 34147140
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||| ||||||||||||||||||||||  ||||||||  |||||||||||||||||||||    
T  34147212 atcgctcgtttaaaactacggggtgcaaaatcgcacaattgataaactata-agggaaaagtgcaattaagcct 34147140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37780723 - 37780796
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  37780723 atcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25940995 - 25941067
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagc 72  Q
    ||||||||| |||||||||||| |||||||||||| ||||  ||||||||||| |||||||||||||||||||    
T  25940995 atcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11351408 - 11351483
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  ||||| | ||||||||||||||| ||||    
T  11351408 atcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18817025 - 18816950
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||    
T  18817025 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 18816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 22428989 - 22428932
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||    
T  22428989 atggggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagccta 22428932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 22429194 - 22429251
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||||| |||||  |||||||||||| ||||||||||||||    
T  22429194 atggggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagccta 22429251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 31569975 - 31569904
Alignment:
Q  5 ctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctat 76  Q
    ||||| |||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||| |||||    
T  31569975 ctcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaaacctat 31569904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11350880 - 11350807
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||  ||||||| ||||| |||||||||||||    
T  11350880 atcgctcgtttaaaaatatggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagcct 11350807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30401955 - 30401885
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    |||||| || |||||||||||| |||||||| | |||||||||||||||||| | ||||||||||||||||    
T  30401955 atcgctagtttaaaactatgggatgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaa 30401885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 41383167 - 41383221
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||  |||||||||||||| |||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaatagggggaaaagttcaattaagcct 41383221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 26020506 - 26020449
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||||| |||||  |||||| ||||||||||||||||||||    
T  26020506 atggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcct 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42919377 - 42919304
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||  ||| |||| |||||||||||||||| ||| |||||||| ||||| ||||||||||||    
T  42919377 atcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatataggggaaaaagagcaattaagcct 42919304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 16466746 - 16466798
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagccta 16466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 18433071 - 18433015
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||    
T  18433071 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 25115811 - 25115755
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||||    
T  25115811 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 25174903 - 25174847
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||||    
T  25174903 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 11316784 - 11316717
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaa 70  Q
    |||||| ||||| ||| || |||||||| | ||||||||||||||||||| |||||||||||||||||    
T  11316784 gctcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaa 11316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 34577162 - 34577217
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| ||||||| |||||  ||||||| |||||||||||||||||    
T  34577162 atggggtgcaaaatcacacaattagcaaaagataggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11316955 - 11317025
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||| | |||||| ||||||||||||||||||||||||||||| || || ||  ||||||||||||||    
T  11316955 atcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaagtacagaggaaaaaagtgcaattaa 11317025  T

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Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 23011131 - 23011079
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||| |||||  ||| |||||||| ||||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 25116061 - 25116117
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||||||||||||    
T  25116061 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25116117  T

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Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 25175151 - 25175207
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||||||||||||    
T  25175151 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25175207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 34576922 - 34576870
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    |||||||| |||||||||||||| |||||  |||||||| |||||||||||||    
T  34576922 atggggtgtaaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 34576870  T

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Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 18433316 - 18433371
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  18433316 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 33324838 - 33324905
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaa-gtgcaattaagcctattatttattat 86  Q
    ||||||||||||| |||||||| ||||  ||||||| |||| ||||||||||||||| ||| ||||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagcctagtatatattat 33324905  T

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Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaat 67  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

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Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 9665611 - 9665560
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    |||||||||||||| |||||||| |||||  ||| ||||||||||||||||||    
T  9665611 atggggtgcaaaattgcacaattagcaaaagata-ggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 9665828 - 9665879
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||| |||||||| |||||  ||||||||||||||| |||||||||    
T  9665828 gggtgcaaaat-gcacaattagcaaaagatagggggaaaagtggaattaagcc 9665879  T

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Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40848593 - 40848520
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40848593 atcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 40848520  T

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Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 48159970 - 48159893
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcctatt 77  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48159970 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctatt 48159893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3353200 - 3353128
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3353200 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 3353128  T

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Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42673050 - 42672978
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42673050 atcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 42672978  T

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Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42673277 - 42673349
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42673277 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 42673349  T

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Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40848942 - 40849019
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcctatt 77  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40848942 atcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcctatt 40849019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3353532 - 3353608
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctatt 77  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  3353532 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaactaaacctatt 3353608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24485441 - 24485513
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24485441 atcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaagcc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27238881 - 27238951
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27238881 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 53687961 - 53687887
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  53687961 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 53687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26007254 - 26007181
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  26007254 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaatgcaattaagcct 26007181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 48160314 - 48160387
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  48160314 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36180627 - 36180544
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattatttatta 85  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||||||||    
T  36180627 atcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactata-ggggaaatgtgcaattaagccttttatttatta 36180544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27238538 - 27238463
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  27238538 atcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagccta 27238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22429577 - 22429647
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 71  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  22429577 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggagggaaagtgcaattaag 22429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10348780 - 10348853
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||    
T  10348780 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagcc 10348853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24485094 - 24485025
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  24485094 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaatgtaattaa 24485025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 53688284 - 53688356
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  53688284 atcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactataggggagaaagtgcaattaagcc 53688356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36180971 - 36181046
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  36180971 atcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagccta 36181046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 53766236 - 53766166
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  53766236 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 53766166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 44008385 - 44008454
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||| |||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  44008385 gctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaagcc 44008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47666316 - 47666389
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| | |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  47666316 atcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21896492 - 21896564
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||| |||||||||||||||||||||||| |||| |||||||| |||| ||||||||||||    
T  21896492 atcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatataggggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22429231 - 22429159
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagc 72  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  22429231 atcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42456176 - 42456247
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||| ||||||||||||||||    
T  42456176 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggggaactttaggggg-aaagtgcaattaagcc 42456247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 42455853 - 42455788
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  42455853 taaaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 42455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 53766570 - 53766634
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  53766570 taaaactatagggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcct 53766634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26007600 - 26007675
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccta 75  Q
    ||||||||| ||||| ||||  ||||||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  26007600 atcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaaaccta 26007675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 8315083 - 8315137
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatataggggggaaagtgcaattaagccta 8315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 47871122 - 47871176
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  47871122 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 47871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 47665972 - 47665909
Alignment:
Q  13 aaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagccta 75  Q
    |||| ||| |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  47665972 aaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagccta 47665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 1928419 - 1928489
Alignment:
Q  5 ctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||| ||||| ||||||||||||||||||||||||||||||  |||||| | ||| ||||||||| ||||    
T  1928419 ctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggaggaaaatgcaattaaaccta 1928489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 8314066 - 8314008
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctatta 78  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagccaatta 8314008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 20969019 - 20969073
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10348552 - 10348480
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagc 72  Q
    ||||||||| ||||| |||||| |||||||| | ||||||| ||||||||| ||| |||||||||||||||||    
T  10348552 atcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaagc 10348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 14015962 - 14016028
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattatttatt 84  Q
    ||||||||||||||||||||||| |||||  |||||  ||||||||||||||| ||||  |||||||    
T  14015962 atggggtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaaacctaaaatttatt 14016028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 17372352 - 17372298
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaa-gtgcaattaagcc 73  Q
    ||||||||||||||||||||| |||||  |||||||||||| |||||||||||||    
T  17372352 ggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 18874935 - 18874878
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcctatt 77  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||| ||||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcctatt 18874878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44008040 - 44007967
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||  | |||||| | |||||||||  ||||||||||| |||||||||||||||||||    
T  44008040 atcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagcc 44007967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 17372594 - 17372645
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    ||||||||||||||||||||| | ||| |||| ||||||||||||||||||||    
T  17372594 ggggtgcaaaatcgcacaattagtaaaatata-ggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 21895714 - 21895655
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactata--gggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||| |||||||||||||  |||  |||| |||||||||||||||||||    
T  21895714 atggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagccta 21895655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 45060872 - 45060928
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctat 76  Q
    ||||| |||||||||||||| |||||  ||||||| |||||||||||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcctat 45060928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 10293909 - 10293963
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||||||||||    
T  10293909 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 13657499 - 13657445
Alignment:
Q  20 ggggtgcaaaatcgcacaattggc-aaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||| |||  |||||| |||||||| |||||||||    
T  13657499 ggggtgcaaaatcgcacaattggcaaaaaaatagggagaaaagtgtaattaagcc 13657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 18875191 - 18875245
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 73  Q
    |||||||||||||| |||||| |||||  |||||||| |||||||||||||||||    
T  18875191 ggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 26540744 - 26540694
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    |||||||||||| ||||||||| ||||  ||||||| ||||||||||||||    
T  26540744 ggggtgcaaaattgcacaattgacaaaaaataggggcaaaagtgcaattaa 26540694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 47870877 - 47870819
Alignment:
Q  20 ggggtgcaaaat-cgcacaattggcaaactatagggggaaaagtgcaattaagcctatt 77  Q
    |||||||||||| |||| |||| |||||  ||||||| |||||||||||||||||||||    
T  47870877 ggggtgcaaaattcgcataattagcaaaagataggggaaaaagtgcaattaagcctatt 47870819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 1927825 - 1927772
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| ||||||||||  ||| |||||||| |||||||||||||    
T  1927825 gggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 9027033 - 9027086
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||| ||||| |||||||| |||||  ||||||||||||||| |||||||||    
T  9027033 ggggtgtaaaattgcacaattagcaaaagatagggggaaaagtgaaattaagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 86
Target Start/End: Original strand, 28964451 - 28964480
Alignment:
Q  57 aaaagtgcaattaagcctattatttattat 86  Q
    ||||||||||||||||||||||||||||||    
T  28964451 aaaagtgcaattaagcctattatttattat 28964480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 42627550 - 42627599
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||| |||||  |||| ||||||||||||||||||||    
T  42627550 tgcaaaatcacacaattagcaaaagatagagggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 3644781 - 3644837
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||  ||||  || |||||||||| ||||||||||||    
T  3644781 atggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37720277 - 37720203
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37720277 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 16911250 - 16911321
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  16911250 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggcgaaagtgcaattaagc 16911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18750107 - 18750178
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18750107 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8851221 - 8851151
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8851221 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8851563 - 8851637
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8851563 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 8851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26692801 - 26692871
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26692801 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7664321 - 7664244
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcctatt 77  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  7664321 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcctatt 7664244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7664654 - 7664727
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  7664654 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7979984 - 7980057
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  7979984 atcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaagcct 7980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16910900 - 16910827
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  16910900 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcc 16910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17851050 - 17850978
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17851050 atcgctcgt-taaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6325328 - 6325409
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctattattt 81  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  6325328 atcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagtcttttattt 6325409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 5379952 - 5380024
Alignment:
Q  13 aaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctattatttatt 84  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  5379952 aaactacggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagcctattttttatt 5380024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 5378722 - 5378659
Alignment:
Q  13 aaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5378722 aaactacggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 5378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6324990 - 6324924
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaa 66  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  6324990 atcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7979638 - 7979565
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||    
T  7979638 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaactata-agggaaaagtgcaataaagccta 7979565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 19141515 - 19141446
Alignment:
Q  2 tcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaag 71  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  19141515 tcgctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

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Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26692469 - 26692399
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  26692469 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19141830 - 19141898
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  19141830 atcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaa 19141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41790563 - 41790494
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  41790563 atcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2639463 - 2639539
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctat 76  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  2639463 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctat 2639539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26841660 - 26841585
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  26841660 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 26841585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41790893 - 41790968
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| | |||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  41790893 atcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagccta 41790968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2638893 - 2638819
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||    
T  2638893 atcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 2638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5793520 - 5793450
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaacta-tagggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  5793520 atcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38490822 - 38490894
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||| ||| | ||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  38490822 atcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactatagggaggaaagtgcaattaagcc 38490894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17851383 - 17851433
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata 51  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  17851383 atcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactata 17851433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 30190977 - 30190919
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcctatt 77  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  30190977 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctatt 30190919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 18296691 - 18296748
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  18296691 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26842219 - 26842292
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||| |||||||    
T  26842219 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18296149 - 18296077
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagc 72  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||||| |||||||||    
T  18296149 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 18749793 - 18749717
Alignment:
Q  6 tcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattattta 82  Q
    |||| |||||||||||||||||||||| || ||||| ||||||| ||| | |||||||||||||| || ||||||||    
T  18749793 tcgtttaaaactatggggtgcaaaatcacataattgacaaactagaggagtaaaagtgcaattaaaccaattattta 18749717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 20347464 - 20347519
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  20347464 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 20347519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7591274 - 7591204
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 70  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||||| |||||||    
T  7591274 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 11883677 - 11883615
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcctattattt 81  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||| ||||||    
T  11883677 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccttttattt 11883615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 32673143 - 32673193
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  32673143 ggggtgcaaaatcgcacaattggcaaaagataggggaaaaagtgcaattaa 32673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 24832387 - 24832330
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||    
T  24832387 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 24832330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 6171207 - 6171156
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||  ||||  |||||||||||||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 6171456 - 6171511
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||||||| |||||||||||||  ||| |||||||||||||||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcct 6171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 11883926 - 11883980
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||    
T  11883926 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 43495609 - 43495658
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||| ||||| |||||| || ||||||||||||||||    
T  43495609 tgcaaaatcgcacaattagcaaaatataggtgggaaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 43495356 - 43495308
Alignment:
Q  27 aaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcct 74  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaagcct 43495308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 18055100 - 18055050
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 71  Q
    ||||||||||||||||||||| |||||   ||||||||||||||||||||||    
T  18055100 ggggtgcaaaatcgcacaattagcaaa-agtagggggaaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 40221364 - 40221313
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||| |||||| |||||  ||||||||||| |||||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagatagggggaaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 40469729 - 40469780
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaa 70  Q
    ||||||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  40469729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 43495484 - 43495535
Alignment:
Q  20 ggggtgcaaaatcgcacaattggc-aaactatagggggaaaagtgcaattaa 70  Q
    |||||||||||||||||||||| | |||  ||||||||||||||||||||||    
T  43495484 ggggtgcaaaatcgcacaattgacaaaaagatagggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 26737534 - 26737481
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||  ||| || |||||||||||||||||||    
T  26737534 ggggtgcaaaatcgcacaattagcaaaagata-ggagaaaagtgcaattaagcct 26737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 26737781 - 26737835
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    |||||||||||||||||| || |||||  ||||||| ||||||||||||||||||    
T  26737781 ggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 6495723 - 6495776
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||  ||||  |||||| ||||||||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcct 6495776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7591831 - 7591876
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaa 46  Q
    ||||||||| |||||  |||||||||||||||||||||||| ||||    
T  7591831 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattgacaaa 7591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 17346037 - 17346090
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||| |||||  |||  || |||||||||||||||||||    
T  17346037 ggtgcaaaatcgcacaattagcaaaagataaaggaaaaagtgcaattaagccta 17346090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 20347217 - 20347160
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcctat 76  Q
    |||||||||||||||||||||  ||||  |||| ||||||||||| ||||||||||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcctat 20347160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 18055221 - 18055169
Alignment:
Q  20 ggggtgcaaaatcgcacaattggc-aaactataggg-ggaaaagtgcaattaa 70  Q
    |||||||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  18055221 ggggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaa 18055169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19693 - 19620
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  19693 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaagcct 19620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 20034 - 20100
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcctat 76  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  20034 taaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcctat 20100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 185255 - 185328
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  185255 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 184912 - 184840
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagc 72  Q
    ||||||||| ||||||||||||||||||||| ||||| ||| |||||||||| || |||||||||||||||||    
T  184912 atcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaagc 184840  T

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Target: scaffold0460 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 744 - 816
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  744 atcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaagcc 816  T

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Target: scaffold0460; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 403 - 329
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  403 atcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 329  T

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Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 37396781 - 37396706
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  37396781 atcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagccta 37396706  T

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Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24473749 - 24473823
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  24473749 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagcct 24473823  T

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Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34498195 - 34498113
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcctattattta 82  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||    
T  34498195 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaaaccaattattta 34498113  T

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Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41662594 - 41662520
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41662594 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcct 41662520  T

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Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25439107 - 25439176
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  25439107 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaa 25439176  T

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Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 37397127 - 37397199
Alignment:
Q  2 tcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37397127 tcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37397199  T

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Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6199077 - 6199152
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  6199077 atcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaagccta 6199152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20861619 - 20861693
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  20861619 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcct 20861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13936795 - 13936722
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||| |||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  13936795 atcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcct 13936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 25438855 - 25438794
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaag 71  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25438855 taaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 34498546 - 34498611
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  34498546 taaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagccta 34498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15444628 - 15444703
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccta 75  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||    
T  15444628 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaaccta 15444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 9623572 - 9623502
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||    
T  9623572 gctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagcc 9623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17431360 - 17431286
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  17431360 atcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaagcct 17431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 16169243 - 16169174
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||| |||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  16169243 gctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaagcc 16169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24473416 - 24473343
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 73  Q
    ||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  24473416 atcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagcc 24473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 2856587 - 2856524
Alignment:
Q  13 aaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||    
T  2856587 aaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagccta 2856524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9823342 - 9823416
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  9823342 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39724029 - 39724102
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  39724029 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6198731 - 6198656
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||| ||||||||| |||||||||||||||||||||| | || ||| ||| ||||||||||||||||||||    
T  6198731 atcgctcgtttaaaactatagggtgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaattaagccta 6198656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13026708 - 13026633
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagccta 75  Q
    ||||||||| |||||  ||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  13026708 atcgctcgtttaaaaacatgaggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 13026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13027262 - 13027332
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 70  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  13027262 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 9623879 - 9623935
Alignment:
Q  17 tatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||    
T  9623879 tatggggtgcaaaatcacacgattggcaaactataggatgaaaagtgcaattaagcc 9623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 16929242 - 16929305
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctattattta 82  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||||||||| ||||||||    
T  16929242 ggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagccaattattta 16929305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 43162285 - 43162234
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  43162285 ggtgcaaaatcgcacaattaacaaaatatagggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 41662403 - 41662457
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  41662403 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9822821 - 9822748
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  ||||||||||||||||||||||||  |||  ||||||| ||||||||||||||||||    
T  9822821 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 12281176 - 12281123
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  12281176 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22851463 - 22851390
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    |||||| || |||||  |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  22851463 atcgcttgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 765788 - 765736
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaag 71  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  765788 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 13937374 - 13937446
Alignment:
Q  5 ctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctat 76  Q
    ||||| |||||  |||||||||||| ||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  13937374 ctcgtttaaaaacatggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcctat 13937446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 33726756 - 33726696
Alignment:
Q  12 aaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaag 71  Q
    |||||||| ||  |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  33726756 aaaactataggaggcaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaag 33726696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 37752140 - 37752084
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||    
T  37752140 atggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 6092838 - 6092776
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||| |||||| |||||||||||||||||| ||||  |||||||||||| |||||||||||||    
T  6092838 taaaaatatgggatgcaaaatcgcacaattgacaaaagatagggggaaaa-tgcaattaagcct 6092776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15444284 - 15444213
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaag 71  Q
    ||||||||| |||||||||||  || ||||| | |||||||||||||||||| |||||||| ||||||||||    
T  15444284 atcgctcgtttaaaactatggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaattaag 15444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 15156185 - 15156239
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||    
T  15156185 ggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33727086 - 33727136
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata 51  Q
    ||||||||| ||||||||||  |||||||||||||||||| ||||||||||    
T  33727086 atcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactata 33727136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 74739 - 74678
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattattt 81  Q
    ||||||||||||||||||||| |||||  || | |||||||||||||||||| | |||||||    
T  74739 ggggtgcaaaatcgcacaattagcaaaagatggagggaaaagtgcaattaagtcaattattt 74678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3307411 - 3307338
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    |||||| || ||||| |||||| |||||||||||||||||| ||||  ||||||| ||||| ||||||||||||    
T  3307411 atcgcttgtttaaaaatatgggatgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 3463946 - 3463999
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    |||||||| ||||||||||| ||||| |||| ||||||||||||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16169588 - 16169661
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 73  Q
    ||||||||| |||||||||  | |||||| | |||||||||  ||||||||||| |||||||||||||||||||    
T  16169588 atcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagcc 16169661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 43162539 - 43162588
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaatta 69  Q
    ||||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  43162539 ggggtgcaaaatcgcacgattgacaaaagatagggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 15155937 - 15155881
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||||    
T  15155937 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 15155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 16928996 - 16928940
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||| |||||  ||| ||||| ||||||||||||||||||    
T  16928996 ggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagccta 16928940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 23123394 - 23123338
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 73  Q
    |||||||| ||||||||||||||| ||||  ||||| ||||||||||||||||||||    
T  23123394 atggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15042218 - 15042143
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagccta 75  Q
    ||||||| | |||||| || |||||||||||| |||||||||||||  || |||||| ||||||||||||| ||||    
T  15042218 atcgctcatttaaaacaatagggtgcaaaatcacacaattggcaaaagataaggggggaaagtgcaattaaaccta 15042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 15043764 - 15043847
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattatttatt 84  Q
    ||||||||| ||||||||||| |  ||||||||| |||||| ||||  ||||||| || ||| ||||||| |||||| ||||||    
T  15043764 atcgctcgtttaaaactatggagcacaaaatcgcgcaattgtcaaaagataggggaaagagtccaattaaacctattttttatt 15043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15442836 - 15442765
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaag 71  Q
    ||||| ||| |||||  ||||||||||||||| |||||||||| || |||| ||||||||| ||||||||||    
T  15442836 atcgcacgtttaaaaacatggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaag 15442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 43246176 - 43246231
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||||||| ||||||| |||||  ||||||| |||||||||||||||||||    
T  43246176 ggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcct 43246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 7127702 - 7127660
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaa 66  Q
    ||||||||||||||||| |||||  ||||||||||||||||||    
T  7127702 tgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 12281426 - 12281480
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||  ||||  ||| ||||||||||||||||||||||    
T  12281426 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 37752416 - 37752470
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||||||||||    
T  37752416 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 43245925 - 43245871
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  43245925 ggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 34313817 - 34313765
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||  ||||  ||||||| |||||||||||||||||    
T  34313817 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaagtgcaattaagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39723475 - 39723430
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaa 46  Q
    ||||||||| |||||  ||||| |||||||||||||||||||||||    
T  39723475 atcgctcgtttaaaaacatgggatgcaaaatcgcacaattggcaaa 39723430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 17652048 - 17652005
Alignment:
Q  84 tattacaaattacaagaaaaaa--ctaaggaggatttgaaatgc 125  Q
    ||||||||||||||||||||||  | ||||||||||||||||||    
T  17652048 tattacaaattacaagaaaaaaaacaaaggaggatttgaaatgc 17652005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 50490 - 50560
Alignment:
Q  4 gctcgtctaaaactatgggg-tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50490 gctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 50560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50146 - 50074
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  50146 atcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggggg-aaagtgcaattaagcct 50074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10087839 - 10087912
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  10087839 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29074353 - 29074426
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  29074353 atcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29079117 - 29079190
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  29079117 atcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29106926 - 29106999
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  29106926 atcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29106999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33974280 - 33974353
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  33974280 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 7654533 - 7654603
Alignment:
Q  5 ctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  7654533 ctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 7654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 22684349 - 22684411
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  22684349 taaaactatggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagcc 22684411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 22754719 - 22754657
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  22754719 taaaactatggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagcc 22754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32733977 - 32734047
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggg-ggaaaagtgcaattaa 70  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32733977 atcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 32734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33829617 - 33829693
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctat 76  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  33829617 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctat 33829693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13177037 - 13177110
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||| |||||||||| |||| |||||| |||||||| || ||||||||||||||||||||| |||||||    
T  13177037 atcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatactatagggggaaaagtgcaactaagcct 13177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33829063 - 33828990
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  33829063 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22755070 - 22755142
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagc 72  Q
    ||||||||| |||||||||| |||||||||||||| ||||| |||||||| | ||||||||||||||||||||    
T  22755070 atcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 10039729 - 10039674
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 13579651 - 13579706
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  13579651 ggggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagccta 13579706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2354481 - 2354409
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||| | |||| ||||| |||||||||| |||||||  ||||||||||||||||| ||||||||||||    
T  2354481 atcgctcgttttaaacaatgggatgcaaaatcgtacaattgaaaaactatagggggaaaaatgcaattaagcc 2354409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 2354794 - 2354865
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcct 74  Q
    |||||| | |||| |||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||    
T  2354794 gctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcct 2354865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 3403989 - 3404047
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcctatt 77  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||||    
T  3403989 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctatt 3404047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 21032032 - 21031978
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||   |||||||||||||||||||||||||    
T  21032032 ggggtgcaaaatcgcacaattagcaaaagttagggggaaaagtgcaattaagcct 21031978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 3403773 - 3403717
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||    
T  3403773 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 30388111 - 30388051
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattatttatt 84  Q
    ||||||||||||||||| |||||  |||||||| |||||||||||||||| | ||||||||    
T  30388111 tgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagccaaatatttatt 30388051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 32733627 - 32733571
Alignment:
Q  4 gctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaa 60  Q
    |||||| |||||||||||| |||||||||| | |||||||||||||||| |||||||    
T  32733627 gctcgtttaaaactatgggatgcaaaatcgtataattggcaaactatagagggaaaa 32733571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 403711 - 403651
Alignment:
Q  11 taaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaag 71  Q
    |||||||||| |||||||||| ||| |||||||||||||||||    ||||||||||||||    
T  403711 taaaactatgaggtgcaaaattgcaaaattggcaaactataggaaagaaagtgcaattaag 403651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 31598726 - 31598778
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||| |||||||||||||||||  ||||  ||||||||||||||||||||||    
T  31598726 atgggatgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 31598778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 18241908 - 18241853
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  18241908 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18241853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 23250645 - 23250582
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattatttat 83  Q
    ||||||||| ||| |||||||| ||||  ||||||| |||||||||||||||||| ||| ||||    
T  23250645 ggggtgcaagatctcacaattgacaaaagataggggaaaaagtgcaattaagccttttaattat 23250582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 11656782 - 11656836
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||| |||||  ||||| | ||||||||||||||||||    
T  11656782 ggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 33655115 - 33655169
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    |||||||||||| |||||||| |||||  ||| ||||| ||||||||||||||||    
T  33655115 ggggtgcaaaattgcacaattagcaaaagataaggggacaagtgcaattaagcct 33655169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 31598274 - 31598327
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||| |||||  |||| ||||||| | |||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagatagagggaaaaatacaattaagcct 31598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13176692 - 13176624
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaatta 69  Q
    ||||||| | |||||  ||||| | |||||||| ||||||||||||||||||||  ||||| |||||||    
T  13176692 atcgctcatttaaaatcatgggatacaaaatcgtacaattggcaaactatagggaaaaaagggcaatta 13176624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 30388362 - 30388402
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaa 60  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  30388362 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaa 30388402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38676 - 38750
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcct 74  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38676 atcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 38750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38324 - 38284
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattg 41  Q
    ||||||| | |||||||||||| ||||||||||||||||||    
T  38324 atcgctcatttaaaactatgggatgcaaaatcgcacaattg 38284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9979 - 9904
Alignment:
Q  1 atcgctcgtctaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcct 74  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9979 atcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 9904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 10311 - 10378
Alignment:
Q  12 aaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcctattatt 80  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| ||||    
T  10311 aaaactatagggtgcaaaatcggacaattggcaaactata-ggggaaaagtgctattaagcctaatatt 10378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 45807 - 45862
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  45807 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaagccta 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 45587 - 45536
Alignment:
Q  23 gtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||  ||||  ||||||||||||||||||||||||||    
T  45587 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcct 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6776 - 6849
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 73  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  6776 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6225 - 6152
Alignment:
Q  1 atcgctcgtctaaaactatggggtgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 73  Q
    ||||||| | ||||| ||||||||| |||||||||||||| |||||  |||| || ||||||||||||||||||    
T  6225 atcgctcatttaaaaatatggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 6697 - 6750
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  6697 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 6448 - 6393
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||    
T  6448 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 1420 - 1474
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  1420 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 1172 - 1118
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||  ||||  |||||||| |||||||||||||||||    
T  1172 ggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 7515 - 7454
Alignment:
Q  13 aaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    |||| |||||||||||||||||| |||| |||||  ||||||| ||||||||||||||||||    
T  7515 aaacgatggggtgcaaaatcgcataattagcaaaagataggggaaaaagtgcaattaagcct 7454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 7600 - 7653
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||| ||||||||||||||| |||||  ||||||| |||||||||||||||||    
T  7600 ggggtacaaaatcgcacaattagcaaaagataggggaaaaagtgcaattaagcc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 411976 - 411923
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||||| ||||  |||||||| ||||||||||||||||    
T  411976 ggggtgcaaaatcgcacaattgacaaaagatagggggtaaagtgcaattaagcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 1566 - 1511
Alignment:
Q  18 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| |||||||||||||  |||| || |||||||||||||||||    
T  1566 atggggtgcaaaatcacacaattggcaaaagatagaggaaaaagtgcaattaagcc 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 1786 - 1834
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||||||||||||   ||||  ||||||||||||||||||||||    
T  1786 ggtgcaaaatcgcacaataaacaaaagatagggggaaaagtgcaattaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 25369 - 25424
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||    
T  25369 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 25424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 17158 - 17209
Alignment:
Q  22 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 73  Q
    |||||||||| |||||||| |||||  |||||||||||||||||||||||||    
T  17158 ggtgcaaaattgcacaattagcaaaagatagggggaaaagtgcaattaagcc 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 205740 - 205686
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||||| |||||  |||||| ||||| |||||||||||||    
T  205740 ggggtgcaaaatcgcacaattagcaaaagatagggagaaaaatgcaattaagcct 205686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 438984 - 438930
Alignment:
Q  20 ggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||    
T  438984 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 183416 - 183367
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 70  Q
    ||||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagatagggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 183670 - 183717
Alignment:
Q  28 aaatcgcacaattggcaaactatagggg-gaaaagtgcaattaagcct 74  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  183670 aaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcct 183717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 439203 - 439261
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactatagggggaaaa-gtgcaattaagcctattattt 81  Q
    ||||||||||||||||| |||||  ||| |||||||| ||||||||||||||| |||||    
T  439203 tgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagcctagtattt 439261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 6877 - 6927
Alignment:
Q  21 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagc 72  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||    
T  6877 gggtgcaaaat-gcacaattggcaaaagataggggggaaagtgcaattaagc 6927  T

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Target: scaffold0535 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 10062 - 10011
Alignment:
Q  24 tgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcct 74  Q
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T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagcct 10011  T

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