View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19563_low_56 (Length: 237)
Name: NF19563_low_56
Description: NF19563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19563_low_56 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 28090376 - 28090599
Alignment:
| Q |
1 |
cagtcttactcttcaaagagtcgataaaggatagtatattgctattgcaaaacagtgattttgtcagcaacctagctgtctttgtgttgattaaacttcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28090376 |
cagtcttactcttcaaagagtcgataaaggatagtatattgctattgcaaaacagtgattttgtcagcaacctagctgtctttgtgttgattaaacttcc |
28090475 |
T |
|
| Q |
101 |
tctccaaactactgagtcattgagcatgagtcttcggttcaacaaaaccagctctcagctcctcaaatgaatactcaaatgattgagcaatctttgcagc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28090476 |
tctccaaactactgagtcattgagcatgagtcttcggttcaacaaaaccagctctcagctcctcaaatgaatactcaaatgattgagcaatctttgcagc |
28090575 |
T |
|
| Q |
201 |
agccctagaagtgtctggtgtagc |
224 |
Q |
| |
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|||| ||||||||||||||||||| |
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| T |
28090576 |
agccttagaagtgtctggtgtagc |
28090599 |
T |
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