View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19565_low_9 (Length: 224)
Name: NF19565_low_9
Description: NF19565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19565_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 40729284 - 40729501
Alignment:
| Q |
1 |
aggtgagagggtggagcgaatgtgagatcgaatacgagcttggtagagttgtttctcttgttcgagaaggttacgctgtttctctttggcgcgtttttcg |
100 |
Q |
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| T |
40729284 |
aggtgagagagtggagcgaatgtgagatcgaatacgagcttggtagagttgtttctcttgttcgagaaggttacgctgtttctctttggcgcgtttttcg |
40729383 |
T |
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| Q |
101 |
tgcatacgtttccatttccatttgcttacgccgccggggaaggtgcgaggaccgccacccatgttacggaggagacggaggttccaggctgttagtgacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40729384 |
tgcatacgtttccatttccatttgcttacgccgccggggaaggtgcgaggaccgccacccatgttacggaggagacggaggttccaggctgttagtgacc |
40729483 |
T |
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| Q |
201 |
atgatgctgatgatgatg |
218 |
Q |
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||||||||| |||||||| |
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| T |
40729484 |
atgatgctgctgatgatg |
40729501 |
T |
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