View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19566_high_7 (Length: 234)
Name: NF19566_high_7
Description: NF19566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19566_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 12236309 - 12236345
Alignment:
| Q |
17 |
tcctactaaaaagtaattaacacaaataagctagttt |
53 |
Q |
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| T |
12236309 |
tcctactaaaaagtaattaacacaaataagctagttt |
12236345 |
T |
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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 13117189 - 13117153
Alignment:
| Q |
17 |
tcctactaaaaagtaattaacacaaataagctagttt |
53 |
Q |
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|||||||||||||||||||||||||||||||| |||| |
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| T |
13117189 |
tcctactaaaaagtaattaacacaaataagcttgttt |
13117153 |
T |
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