View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19568_high_1 (Length: 533)

Name: NF19568_high_1
Description: NF19568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19568_high_1
NF19568_high_1
[»] chr5 (52 HSPs)
chr5 (248-510)||(27844749-27845011)
chr5 (12-153)||(42491598-42491739)
chr5 (151-251)||(39030582-39030682)
chr5 (151-251)||(33669918-33670018)
chr5 (157-245)||(39030560-39030648)
chr5 (150-251)||(34252736-34252837)
chr5 (150-214)||(34252707-34252771)
chr5 (150-251)||(33669946-33670047)
chr5 (151-239)||(2424429-2424517)
chr5 (151-246)||(38958052-38958147)
chr5 (150-251)||(42324870-42324971)
chr5 (153-207)||(9956561-9956615)
chr5 (150-251)||(26730044-26730145)
chr5 (166-234)||(2884064-2884132)
chr5 (151-251)||(9956489-9956589)
chr5 (194-242)||(38958089-38958137)
chr5 (148-231)||(2424477-2424560)
chr5 (160-239)||(17555944-17556023)
chr5 (203-246)||(26835273-26835316)
chr5 (193-244)||(28023956-28024007)
chr5 (151-245)||(968273-968367)
chr5 (144-182)||(29960425-29960463)
chr5 (151-237)||(37040136-37040221)
chr5 (165-231)||(42324919-42324985)
chr5 (226-274)||(2629620-2629668)
chr5 (148-246)||(504112-504208)
chr5 (177-251)||(504143-504215)
chr5 (24-67)||(8435101-8435144)
chr5 (166-245)||(15119322-15119401)
chr5 (165-244)||(30293402-30293481)
chr5 (166-251)||(8802791-8802877)
chr5 (222-288)||(9395342-9395408)
chr5 (159-209)||(29960471-29960521)
chr5 (156-242)||(33498357-33498443)
chr5 (151-209)||(36858023-36858081)
chr5 (147-181)||(37522827-37522861)
chr5 (185-242)||(3549585-3549642)
chr5 (218-251)||(11500505-11500538)
chr5 (218-251)||(11537472-11537505)
chr5 (218-251)||(11560956-11560989)
chr5 (228-265)||(14611031-14611068)
chr5 (148-181)||(20644192-20644225)
chr5 (148-181)||(42273822-42273855)
chr5 (160-228)||(12619661-12619729)
chr5 (149-181)||(13146608-13146640)
chr5 (145-181)||(20038959-20038995)
chr5 (199-251)||(20185352-20185403)
chr5 (151-239)||(25467097-25467185)
chr5 (151-207)||(33456768-33456824)
chr5 (222-286)||(37149027-37149091)
chr5 (158-206)||(42708580-42708628)
chr5 (204-244)||(42708608-42708648)
[»] chr1 (38 HSPs)
chr1 (151-251)||(3739805-3739905)
chr1 (159-244)||(29855084-29855169)
chr1 (157-251)||(3739833-3739927)
chr1 (151-251)||(19758261-19758362)
chr1 (150-251)||(47543618-47543719)
chr1 (151-245)||(37918905-37918999)
chr1 (185-270)||(48050938-48051023)
chr1 (149-244)||(29855047-29855142)
chr1 (151-232)||(31784773-31784854)
chr1 (147-231)||(30693322-30693406)
chr1 (179-270)||(48050913-48051004)
chr1 (155-245)||(5056319-5056409)
chr1 (84-145)||(5069669-5069731)
chr1 (151-237)||(47543590-47543676)
chr1 (193-246)||(6061493-6061546)
chr1 (157-206)||(19758335-19758384)
chr1 (150-235)||(24023959-24024044)
chr1 (199-244)||(30693361-30693406)
chr1 (163-207)||(35310315-35310359)
chr1 (148-231)||(30295910-30295993)
chr1 (150-189)||(38067215-38067254)
chr1 (222-280)||(14984837-14984895)
chr1 (222-284)||(39402038-39402100)
chr1 (222-280)||(44955278-44955336)
chr1 (24-69)||(602756-602801)
chr1 (148-181)||(6787259-6787292)
chr1 (195-244)||(24023959-24024008)
chr1 (148-181)||(25990625-25990658)
chr1 (32-69)||(31262804-31262841)
chr1 (199-251)||(3694026-3694078)
chr1 (151-207)||(3694050-3694106)
chr1 (221-265)||(3761535-3761579)
chr1 (149-181)||(15959908-15959940)
chr1 (193-265)||(19610795-19610867)
chr1 (199-251)||(30295941-30295993)
chr1 (353-397)||(42062116-42062160)
chr1 (184-248)||(44955238-44955302)
chr1 (149-181)||(46949198-46949230)
[»] chr2 (65 HSPs)
chr2 (158-251)||(31469090-31469183)
chr2 (151-251)||(10459285-10459385)
chr2 (157-251)||(31469068-31469162)
chr2 (150-244)||(944797-944891)
chr2 (145-214)||(10459251-10459320)
chr2 (150-244)||(38935353-38935447)
chr2 (154-242)||(41374557-41374645)
chr2 (157-246)||(16180432-16180521)
chr2 (153-242)||(43398831-43398920)
chr2 (150-230)||(17437166-17437246)
chr2 (151-245)||(19924329-19924420)
chr2 (183-274)||(13724108-13724199)
chr2 (151-214)||(29291120-29291183)
chr2 (149-214)||(33829378-33829443)
chr2 (151-244)||(43042192-43042285)
chr2 (151-251)||(24037575-24037675)
chr2 (165-245)||(35311190-35311269)
chr2 (158-218)||(41099030-41099090)
chr2 (222-265)||(13062177-13062220)
chr2 (167-246)||(18007506-18007585)
chr2 (152-226)||(16564420-16564494)
chr2 (161-251)||(43398857-43398947)
chr2 (165-245)||(944776-944856)
chr2 (150-214)||(2884246-2884310)
chr2 (148-244)||(11386335-11386431)
chr2 (162-214)||(16180491-16180543)
chr2 (166-245)||(7932749-7932828)
chr2 (150-245)||(38935388-38935483)
chr2 (150-245)||(41374519-41374614)
chr2 (158-261)||(41912075-41912178)
chr2 (152-206)||(2949034-2949088)
chr2 (222-280)||(16243855-16243913)
chr2 (182-287)||(11714802-11714907)
chr2 (200-245)||(17437166-17437211)
chr2 (84-143)||(9021441-9021501)
chr2 (182-274)||(11686169-11686261)
chr2 (185-265)||(14740502-14740582)
chr2 (150-206)||(14781910-14781966)
chr2 (158-245)||(16564376-16564461)
chr2 (166-245)||(4224983-4225062)
chr2 (142-181)||(8701778-8701817)
chr2 (165-251)||(30517875-30517959)
chr2 (196-251)||(35693937-35693992)
chr2 (192-243)||(37104880-37104931)
chr2 (192-246)||(12170433-12170487)
chr2 (147-181)||(21539632-21539666)
chr2 (186-248)||(45294360-45294421)
chr2 (196-245)||(2884281-2884330)
chr2 (184-245)||(10069242-10069303)
chr2 (148-181)||(11617204-11617237)
chr2 (220-269)||(14166749-14166798)
chr2 (150-207)||(15660714-15660771)
chr2 (182-263)||(23227289-23227370)
chr2 (150-214)||(35311240-35311305)
chr2 (199-248)||(40713991-40714040)
chr2 (85-138)||(42251581-42251634)
chr2 (141-181)||(3201504-3201544)
chr2 (149-181)||(6110437-6110469)
chr2 (193-245)||(7932768-7932820)
chr2 (151-231)||(10814852-10814932)
chr2 (192-248)||(12320214-12320270)
chr2 (182-242)||(16734815-16734875)
chr2 (150-246)||(19924295-19924390)
chr2 (192-280)||(23986820-23986908)
chr2 (216-248)||(27280020-27280052)
[»] chr7 (41 HSPs)
chr7 (150-251)||(16866391-16866492)
chr7 (149-244)||(3719866-3719961)
chr7 (160-251)||(18731990-18732081)
chr7 (153-228)||(27147590-27147665)
chr7 (170-244)||(16866427-16866501)
chr7 (84-145)||(36894927-36894989)
chr7 (161-237)||(5026141-5026217)
chr7 (150-206)||(6803297-6803353)
chr7 (199-243)||(44816494-44816538)
chr7 (151-246)||(6803331-6803426)
chr7 (24-142)||(27235222-27235340)
chr7 (149-241)||(3769742-3769834)
chr7 (224-268)||(24097963-24098007)
chr7 (160-239)||(14773502-14773581)
chr7 (160-239)||(15223954-15224033)
chr7 (165-251)||(3719896-3719982)
chr7 (156-246)||(30794465-30794555)
chr7 (165-231)||(44816472-44816538)
chr7 (166-251)||(23971191-23971276)
chr7 (185-274)||(24710704-24710793)
chr7 (193-246)||(47967937-47967990)
chr7 (145-251)||(5026159-5026262)
chr7 (150-182)||(13591028-13591060)
chr7 (13-69)||(41434743-41434799)
chr7 (151-206)||(1554899-1554954)
chr7 (158-241)||(30483889-30483972)
chr7 (222-280)||(94390-94448)
chr7 (158-244)||(18732016-18732101)
chr7 (158-244)||(47967911-47967997)
chr7 (32-69)||(18037884-18037921)
chr7 (220-265)||(18096940-18096985)
chr7 (148-181)||(20123947-20123980)
chr7 (148-181)||(25737577-25737610)
chr7 (148-181)||(25944436-25944469)
chr7 (148-181)||(34515822-34515855)
chr7 (169-218)||(40376785-40376834)
chr7 (222-282)||(23314211-23314271)
chr7 (200-244)||(32652446-32652490)
chr7 (149-181)||(35181068-35181100)
chr7 (82-138)||(37928274-37928330)
chr7 (150-182)||(45485846-45485878)
[»] chr6 (37 HSPs)
chr6 (413-510)||(20139936-20140033)
chr6 (413-510)||(22192836-22192933)
chr6 (408-510)||(31471754-31471856)
chr6 (151-251)||(31323833-31323933)
chr6 (151-245)||(28004614-28004708)
chr6 (150-251)||(31323804-31323905)
chr6 (148-251)||(2282417-2282520)
chr6 (151-246)||(30531202-30531297)
chr6 (148-246)||(14446720-14446818)
chr6 (150-243)||(28004650-28004743)
chr6 (151-237)||(9675753-9675839)
chr6 (166-209)||(28756663-28756706)
chr6 (148-204)||(14446684-14446740)
chr6 (199-245)||(8437813-8437859)
chr6 (199-245)||(9829916-9829962)
chr6 (148-244)||(30531169-30531262)
chr6 (150-231)||(13320849-13320930)
chr6 (199-251)||(31522647-31522699)
chr6 (151-207)||(31522671-31522726)
chr6 (147-239)||(35003790-35003882)
chr6 (194-244)||(8215231-8215281)
chr6 (184-258)||(14936479-14936553)
chr6 (148-242)||(33822316-33822410)
chr6 (222-280)||(35031073-35031131)
chr6 (213-274)||(3788100-3788161)
chr6 (82-119)||(5611212-5611249)
chr6 (184-261)||(6068959-6069036)
chr6 (222-283)||(6330112-6330173)
chr6 (166-207)||(7549781-7549822)
chr6 (150-207)||(7549847-7549904)
chr6 (158-231)||(8437813-8437886)
chr6 (160-245)||(9829891-9829976)
chr6 (148-181)||(21542595-21542628)
chr6 (84-117)||(31223190-31223223)
chr6 (148-181)||(31887370-31887403)
chr6 (149-181)||(11082197-11082229)
chr6 (150-214)||(28596065-28596129)
[»] scaffold2113 (2 HSPs)
scaffold2113 (151-245)||(568-661)
scaffold2113 (162-242)||(604-684)
[»] chr3 (33 HSPs)
chr3 (179-274)||(30443734-30443829)
chr3 (158-245)||(32221468-32221555)
chr3 (149-251)||(46829068-46829163)
chr3 (179-274)||(30443757-30443852)
chr3 (152-231)||(32221509-32221588)
chr3 (158-251)||(46829047-46829133)
chr3 (156-251)||(47783097-47783192)
chr3 (148-239)||(15282627-15282718)
chr3 (150-244)||(26914440-26914533)
chr3 (162-244)||(31280181-31280263)
chr3 (170-248)||(23314684-23314762)
chr3 (166-244)||(31280161-31280239)
chr3 (143-181)||(52251955-52251993)
chr3 (166-231)||(40905808-40905873)
chr3 (222-286)||(2787904-2787968)
chr3 (199-251)||(40905821-40905873)
chr3 (166-242)||(46733045-46733121)
chr3 (151-214)||(47783069-47783132)
chr3 (184-246)||(33942966-33943028)
chr3 (184-246)||(42170380-42170442)
chr3 (222-280)||(42170418-42170476)
chr3 (170-231)||(43323079-43323141)
chr3 (222-280)||(51406673-51406731)
chr3 (84-117)||(11676821-11676854)
chr3 (199-244)||(22756913-22756958)
chr3 (164-237)||(26914482-26914555)
chr3 (186-263)||(43753754-43753831)
chr3 (158-251)||(45610453-45610546)
chr3 (222-286)||(4238588-4238652)
chr3 (155-235)||(18364203-18364282)
chr3 (145-181)||(26207695-26207731)
chr3 (149-181)||(37042328-37042360)
chr3 (199-263)||(43323077-43323141)
[»] chr4 (53 HSPs)
chr4 (150-246)||(12276844-12276940)
chr4 (151-207)||(55762927-55762983)
chr4 (156-251)||(12276816-12276911)
chr4 (151-218)||(55827293-55827360)
chr4 (151-209)||(2734170-2734228)
chr4 (162-239)||(2871529-2871606)
chr4 (221-274)||(42286423-42286476)
chr4 (165-244)||(54235227-54235306)
chr4 (160-242)||(54009984-54010065)
chr4 (151-244)||(4423175-4423268)
chr4 (229-274)||(30315982-30316027)
chr4 (151-246)||(44124222-44124317)
chr4 (201-251)||(55762905-55762955)
chr4 (201-251)||(55827282-55827332)
chr4 (180-265)||(10048533-10048618)
chr4 (82-123)||(18744885-18744926)
chr4 (149-202)||(21606057-21606110)
chr4 (184-273)||(41615683-41615772)
chr4 (150-231)||(54235261-54235342)
chr4 (199-251)||(3249704-3249756)
chr4 (154-206)||(18508881-18508933)
chr4 (149-245)||(24980614-24980710)
chr4 (162-251)||(30848592-30848683)
chr4 (150-206)||(30848656-30848712)
chr4 (158-214)||(48514591-48514647)
chr4 (164-239)||(18995137-18995210)
chr4 (151-214)||(24980681-24980744)
chr4 (164-234)||(55617013-55617084)
chr4 (164-234)||(55624317-55624388)
chr4 (184-246)||(5986910-5986972)
chr4 (184-246)||(24704404-24704466)
chr4 (148-182)||(38940742-38940776)
chr4 (151-209)||(40391247-40391305)
chr4 (150-240)||(44124261-44124351)
chr4 (148-181)||(2229135-2229168)
chr4 (148-181)||(3043381-3043414)
chr4 (170-231)||(3249695-3249756)
chr4 (193-234)||(5496884-5496925)
chr4 (90-145)||(5534383-5534440)
chr4 (148-181)||(12002896-12002929)
chr4 (165-238)||(25048109-25048182)
chr4 (185-246)||(25855118-25855179)
chr4 (222-263)||(41615748-41615789)
chr4 (222-287)||(47833604-47833669)
chr4 (148-181)||(52712936-52712969)
chr4 (144-180)||(7695244-7695280)
chr4 (150-182)||(8258027-8258059)
chr4 (150-182)||(8271445-8271477)
chr4 (186-270)||(10048514-10048597)
chr4 (21-69)||(19147171-19147219)
chr4 (149-181)||(39078016-39078048)
chr4 (184-248)||(42797766-42797830)
chr4 (148-180)||(51545501-51545533)
[»] chr8 (30 HSPs)
chr8 (157-244)||(11114262-11114349)
chr8 (164-251)||(35901039-35901126)
chr8 (160-250)||(29110979-29111069)
chr8 (166-244)||(33557781-33557859)
chr8 (179-281)||(39753279-39753381)
chr8 (184-244)||(13209990-13210050)
chr8 (151-242)||(8777760-8777851)
chr8 (158-205)||(35901100-35901147)
chr8 (150-244)||(29110949-29111043)
chr8 (158-251)||(29797938-29798034)
chr8 (173-246)||(13209977-13210050)
chr8 (162-206)||(7974850-7974894)
chr8 (152-251)||(7974778-7974877)
chr8 (193-244)||(8777795-8777846)
chr8 (154-209)||(29818282-29818337)
chr8 (150-244)||(9548040-9548133)
chr8 (222-280)||(12763726-12763784)
chr8 (184-246)||(25601034-25601096)
chr8 (147-181)||(41086624-41086658)
chr8 (151-251)||(15114636-15114737)
chr8 (26-67)||(15583430-15583471)
chr8 (220-265)||(21485005-21485050)
chr8 (84-137)||(23725710-23725763)
chr8 (192-265)||(39753265-39753338)
chr8 (222-286)||(54684-54748)
chr8 (184-284)||(3304274-3304374)
chr8 (165-245)||(8637254-8637334)
chr8 (167-227)||(10076460-10076520)
chr8 (149-181)||(11992607-11992639)
chr8 (148-244)||(33557801-33557897)
[»] scaffold0650 (1 HSPs)
scaffold0650 (181-245)||(20-84)
[»] scaffold0097 (2 HSPs)
scaffold0097 (199-245)||(37936-37982)
scaffold0097 (151-231)||(37901-37982)
[»] scaffold0034 (1 HSPs)
scaffold0034 (177-244)||(94972-95039)
[»] scaffold0027 (2 HSPs)
scaffold0027 (193-244)||(13200-13251)
scaffold0027 (151-209)||(13165-13223)
[»] scaffold0126 (2 HSPs)
scaffold0126 (203-242)||(28195-28234)
scaffold0126 (148-214)||(28156-28221)
[»] scaffold0009 (2 HSPs)
scaffold0009 (164-239)||(51225-51300)
scaffold0009 (184-246)||(49539-49601)
[»] scaffold1005 (1 HSPs)
scaffold1005 (218-251)||(1181-1214)


Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-122; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 248 - 510
Target Start/End: Original strand, 27844749 - 27845011
Alignment:
Q  248 atttgtttcttataaaaaagaccggagatagtagtatttttgcagaagaatgtgatgacctttgtggtgttagggaggagagagcgaagagtgttgagat 347  Q
    |||||||||||||||||| ||||| |   ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27844749 atttgtttcttataaaaaggaccgaaatgagtagtatttttgcaaaagaatgtgatgaccttagtggtgttagggaggagagagcgaagagtgttgagat 27844848  T
Q  348 gagcgttgattctttgtctgcgtctcctttcagcttctctatgactcttgcatgcttcttttgattttctctccgatttggatttgtcacagttgatttc 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27844849 gagcgttgattctttgtctgcgtctcctttcagcttctctatgactcttgcatgcttcttttgattttctctccgattttgatttgtcacagttgatttc 27844948  T
Q  448 ttctaactctttattatccatccaactctcaaacccgtggaatcttcttaaaggaggaagcat 510  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27844949 ctctaactctttattatccatccaactctcaaacccgtagaatcttcttaaaggaggaagcat 27845011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 42491739 - 42491598
Alignment:
Q  12 gaatataagttctgtcttggaaatataaagtgttacttttgagcaaataataattacaacannnnnnnngtaaaaactttcttgttttggatgtttaacc 111  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||| ||||||    
T  42491739 gaatagaagttttgtcttcgaaatataaagtgttacttttgagcaaataataattacatcattttttttgtaaaaactttcttgttttggatgcttaacc 42491640  T
Q  112 aatgccttggagacactgtttagcattccccaaaacatatac 153  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  42491639 aatgcctttgagacactgtttagcattccccaaaatatatac 42491598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 39030682 - 39030582
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatt 250  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39030682 tactccctccatcccaaaatataagcaaaaattagtcaacaaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 39030583  T
Q  251 t 251  Q
    |    
T  39030582 t 39030582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 33669918 - 33670018
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatt 250  Q
    |||||| ||| ||||||||| ||||||||||| |||||||  |||||| ||||| ||||||||||||| |||||||||||||||||||| |||||| |||    
T  33669918 tactccatccatcccaaaatgtaagcaaaaatgggtcaacataagttagtgtatctggtacaaattttaaaccaaatacattaactttttttgaccaatt 33670017  T
Q  251 t 251  Q
    |    
T  33670018 t 33670018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 39030560 - 39030648
Alignment:
Q  157 ctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||| | ||||||||||||||||||||||||| ||||||||||||||||||  ||| |||  |||||||||||||||||||||||||    
T  39030560 ctccgttctaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgac 39030648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 34252837 - 34252736
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    ||||||||||||||||||||| ||||||||||| ||| |||  ||||| ||| || ||| | ||||||| ||||||||||||||||||||||||||| ||    
T  34252837 atactccctccgtcccaaaatgtaagcaaaaatgggttaacataagttgatgaatgtggcataaattttgaaccaaatacattaacttttgttgaccaat 34252738  T
Q  250 tt 251  Q
    ||    
T  34252737 tt 34252736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 34252707 - 34252771
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  34252707 atactccctccgtcccaaaatgtaagcaaaaattggtcaacaaaagttaatgtatttggttcaaa 34252771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 33670047 - 33669946
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    ||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||||  ||| |||  |||| ||||| |||||| |||||||| ||    
T  33670047 atactccatccgtcccaaaatgtaagcaaaaattggtcaaaaaaagttaatgtatttggtttaaaatttgtaccagatacactaacttatgttgacccat 33669948  T
Q  250 tt 251  Q
    ||    
T  33669947 tt 33669946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 2424429 - 2424517
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    |||||||||||| | |||||||||||||||||| || |||  ||| | |||||| ||||||||||||| ||||||||||||||||||||    
T  2424429 tactccctccgtgctaaaatataagcaaaaatttgttaacataagctgatgtatatggtacaaattttgaaccaaatacattaactttt 2424517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 246
Target Start/End: Original strand, 38958052 - 38958147
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||| ||||||| |||||||||||| |||||||| | ||| |||||||||||||||||| ||||||||  ||||||||||| ||||  ||||||||    
T  38958052 tacttcctccgttccaaaatataagtaaaaattgattaacaaaagttaatgtatttggttcaaattttgtaccaaatacatcaactcatgttgacc 38958147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 42324870 - 42324971
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    |||||||||| || | |||||||||   ||||||||||||   || || |||||||||||| ||||||| || |||||||||||||||||||||||| ||    
T  42324870 atactccctcagtgctaaaatataaattaaaattggtcaatataaattgatgtatttggtataaattttaaaacaaatacattaacttttgttgaccaat 42324969  T
Q  250 tt 251  Q
    ||    
T  42324970 tt 42324971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 9956615 - 9956561
Alignment:
Q  153 ctccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    |||||||||||||||||| |||| |||||||||| ||| ||||||||||||||||    
T  9956615 ctccctccgtcccaaaatgtaagtaaaaattggttaacaaaagttaatgtatttg 9956561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 26730044 - 26730145
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    ||||||||| ||||| || ||||||||||||||  | |||   ||| | ||| ||||| ||||||||||||| |||||||||||||||||||| ||| ||    
T  26730044 atactcccttcgtcctaagatataagcaaaaatatgacaatataagctgatggatttgatacaaatttttaatcaaatacattaacttttgttaaccaat 26730143  T
Q  250 tt 251  Q
    ||    
T  26730144 tt 26730145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 2884132 - 2884064
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaa 234  Q
    |||||||||| |||||||||||||  ||| |||||||||||  |||||||||| || ||||||||||||    
T  2884132 aaaatataagtaaaaattggtcaataaaatttaatgtatttaatacaaattttaaatcaaatacattaa 2884064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 9956489 - 9956589
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatt 250  Q
    |||||| ||| ||||||||| |||| |||||| |||||||  | ||| |||||| || || ||||||| || |||||||||||||||||||| ||| |||    
T  9956489 tactccatccatcccaaaatgtaagtaaaaatgggtcaacatatgttgatgtatctgttataaattttgaatcaaatacattaacttttgttaaccaatt 9956588  T
Q  251 t 251  Q
    |    
T  9956589 t 9956589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 38958137 - 38958089
Alignment:
Q  194 agttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  38958137 agttgatgtatttggtacaaaatttgaaccaaatacattaacttttgtt 38958089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 2424560 - 2424477
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    |||||||| |||| ||||||| ||||| |||||||||||| |  |||||||||||||||||| |||| |||  |||| ||||||    
T  2424560 atatactctctccatcccaaattataaacaaaaattggtcgataaaagttaatgtatttggttcaaaatttgtaccatatacat 2424477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 17555944 - 17556023
Alignment:
Q  160 cgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    |||| ||||||||||| ||||||  ||||||| ||||| || |||||| || ||||||| ||||| ||||||||||||||    
T  17555944 cgtctcaaaatataagtaaaaatgagtcaacgtaagttgatatatttgatataaattttgaaccacatacattaactttt 17556023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 246
Target Start/End: Original strand, 26835273 - 26835316
Alignment:
Q  203 atttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  26835273 atttgatacaaatttttaaccaaatatattaacttttgttgacc 26835316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 28023956 - 28024007
Alignment:
Q  193 aagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||| ||||    
T  28023956 aagttaatgtattttgtacaaattttgaatcaaatacattaacttttattga 28024007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 968273 - 968367
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||| ||||||  |||||| |||| |||| | ||||||   ||||| |||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  968273 tactctctccgtttcaaaatgtaagtaaaagtgggtcaatttaagttgatgtatttggtacaaattttgaactaaatatattaatttttgttgac 968367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 29960425 - 29960463
Alignment:
Q  144 aaacatatactccctccgtcccaaaatataagcaaaaat 182  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  29960425 aaacatatactctctccgtcccaaaatataagcaaaaat 29960463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 37040221 - 37040136
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactt 237  Q
    |||||||||| ||| |||||||||| |||||| ||| |||  ||||| ||||||  |||||||||||| || |||||||||||||||    
T  37040221 tactccctccatcctaaaatataagtaaaaatgggt-aacataagttgatgtatgaggtacaaattttaaatcaaatacattaactt 37040136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 42324985 - 42324919
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |  ||| |||  |||||||||||    
T  42324985 caaaatataagtaaaaattggtcaacaaaagttaatgtatttgttttaaaatttataccaaatacat 42324919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 2629620 - 2629668
Alignment:
Q  226 atacattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    |||||||||||||||||||||||  | ||||||||||| ||||||||||    
T  2629620 atacattaacttttgttgacctaaatatttcttataaacaagaccggag 2629668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 504112 - 504208
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||||| |||||   ||||||||||||||||| ||||||| ||| ||||  |||||||| || | |||  | |||||||||||| |||||||||||    
T  504112 atatactccttccgttttaaaatataagcaaaaatcggtcaacaaaaattaa--tatttggttcagaatttgtatcaaatacattaatttttgttgacc 504208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 504215 - 504143
Alignment:
Q  177 aaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||| ||||||||| ||| |||||||||||| |||||||| | ||||||||  ||||| ||||||||||| ||||    
T  504215 aaaagttggtcaacaaaaattaatgtatttgatacaaattctgaaccaaat--attaatttttgttgaccgattt 504143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 8435144 - 8435101
Alignment:
Q  24 tgtcttggaaatataaagtgttacttttgagcaaataataatta 67  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||    
T  8435144 tgtcttggaaatataaagtgtaacttttgaccaactaataatta 8435101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 15119401 - 15119322
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||||||| ||||||||||| ||   |||||||| |||||  |||||||||| || |||||||||||| |||| |||||    
T  15119401 aaaatataaacaaaaattggttaatataagttaatatatttaatacaaattttgaatcaaatacattaagttttattgac 15119322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 30293481 - 30293402
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||||| ||||||  ||||||  | ||| ||||||||| || ||||||| || |||||||||| |||||||||||    
T  30293481 caaaatataagtaaaaatgagtcaacatatgttgatgtatttgatataaattttgaatcaaatacattgacttttgttga 30293402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 8802877 - 8802791
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaa-ccaaatacattaacttttgttgacctattt 251  Q
    |||||||||| ||||||| ||||| ||||||| || |||||| | |||| |||||  |||||||||||||||||  |||||| ||||    
T  8802877 aaaatataagaaaaaatttgtcaaagaaagttgatatatttgatccaaaattttaggccaaatacattaactttctttgacccattt 8802791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 9395408 - 9395342
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagtattttt 288  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||| ||||| |||||||    
T  9395408 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatattttt 9395342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 29960521 - 29960471
Alignment:
Q  159 ccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggt 209  Q
    |||||||||||| ||| |||||||| | |||| ||||||||||||||||||    
T  29960521 ccgtcccaaaatgtaaacaaaaattagacaacaaaagttaatgtatttggt 29960471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 33498357 - 33498443
Alignment:
Q  156 cctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    ||||||||| ||||||||||||||| |||| |||| ||| | ||| |||||||| |||| |||  || |||||||| ||||| ||||    
T  33498357 cctccgtcctaaaatataagcaaaagttggccaacaaaaatcaatatatttggttcaaaatttgtacaaaatacatcaacttatgtt 33498443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 36858081 - 36858023
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggt 209  Q
    |||||| ||||||||||||| ||||||||||||||| |   ||||||||| ||||||||    
T  36858081 tactccatccgtcccaaaatgtaagcaaaaattggttagtaaaagttaatatatttggt 36858023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 37522861 - 37522827
Alignment:
Q  147 catatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||||| ||||||||||||||    
T  37522861 catatactccctccgtcccataatataagcaaaaa 37522827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 3549642 - 3549585
Alignment:
Q  185 gtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    |||||| ||| ||||||||| ||||  |||||||||||| ||||||| ||||||||||    
T  3549642 gtcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatcaacttttgtt 3549585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 11500538 - 11500505
Alignment:
Q  218 ttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||| ||||||||||||||||||||||||||    
T  11500538 ttaaccagatacattaacttttgttgacctattt 11500505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 11537505 - 11537472
Alignment:
Q  218 ttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||| ||||||||||||||||||||||||||    
T  11537505 ttaaccagatacattaacttttgttgacctattt 11537472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 11560989 - 11560956
Alignment:
Q  218 ttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||| ||||||||||||||||||||||||||    
T  11560989 ttaaccagatacattaacttttgttgacctattt 11560956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 14611068 - 14611031
Alignment:
Q  228 acattaacttttgttgacctatttgtttcttataaaaa 265  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  14611068 acattaacttttgttgacccatttctttcttataaaaa 14611031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 20644225 - 20644192
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||||| ||||||||||||    
T  20644225 atatactccctccgtcccaaattataagcaaaaa 20644192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 42273855 - 42273822
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||||| ||||||||||||    
T  42273855 atatactccctccgtcccaaattataagcaaaaa 42273822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 12619729 - 12619661
Alignment:
Q  160 cgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaata 228  Q
    |||| |||||||||||||||||| | |||||  ||||| ||||||||| || ||||||| || ||||||    
T  12619729 cgtctcaaaatataagcaaaaatggatcaacataagttgatgtatttgatataaattttgaatcaaata 12619661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 13146608 - 13146640
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||| ||||||||||||||||    
T  13146608 tatactccctccgtcctaaaatataagcaaaaa 13146640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 20038959 - 20038995
Alignment:
Q  145 aacatatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  20038959 aacagatactccctccgtcccataatataagcaaaaa 20038995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 20185352 - 20185403
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||| ||| ||||    
T  20185352 atgtattttgtacaaattttgaaccaaatacattaa-ttttgttaaccaattt 20185403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 25467097 - 25467185
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    ||||| ||||||| |||||| ||||||||||| | | |||  ||||| ||||||  | || ||||||| ||||| ||||||||||||||    
T  25467097 tactctctccgtctcaaaatgtaagcaaaaatggattaacataagttgatgtatccgatataaattttgaaccacatacattaactttt 25467185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 33456768 - 33456824
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    ||||||||||||  |||||||| ||||||| || ||||| ||||||| |||||||||    
T  33456768 tactccctccgtaacaaaatatgagcaaaagttagtcaaagaaagttgatgtatttg 33456824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 37149027 - 37149091
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagtattt 286  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||| ||||| |||||    
T  37149027 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 37149091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 42708580 - 42708628
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    ||||||| |||||||| |||||||||  ||||| |||||||||||||||    
T  42708580 tccgtcctaaaatatacgcaaaaattaatcaacaaaagttaatgtattt 42708628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 42708648 - 42708608
Alignment:
Q  204 tttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||| ||||||| ||| |||||||||||||||||||||    
T  42708648 tttggtataaattttcaactaaatacattaacttttgttga 42708608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 3739805 - 3739905
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatt 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3739805 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccaatt 3739904  T
Q  251 t 251  Q
    |    
T  3739905 t 3739905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 29855169 - 29855084
Alignment:
Q  159 ccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  29855169 ccgtcctaaaatataagcaaaaattgatcaacaaaagttaatgtatttcgtacaaatttttaaccaaatacatcaacttttgttga 29855084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 3739927 - 3739833
Alignment:
Q  157 ctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||  ||| |||  |||||||||||||||||| ||||||| ||||    
T  3739927 ctccgtcctaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaactttcgttgaccaattt 3739833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 19758261 - 19758362
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtc-aacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    |||||| ||||||||||||| |||||||||||  ||  |||| ||||| |||||||||||||||||| | ||| ||||||||||||||||||||||| ||    
T  19758261 tactccttccgtcccaaaatgtaagcaaaaatgagtataacgtaagttgatgtatttggtacaaattataaactaaatacattaacttttgttgaccaat 19758360  T
Q  250 tt 251  Q
    ||    
T  19758361 tt 19758362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 47543719 - 47543618
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    ||||||||||||||||||||| ||||| |||||     | || ||||| |||||||||||||||||||| |||||||| |||||| ||||||||||| ||    
T  47543719 atactccctccgtcccaaaatgtaagccaaaatgaaatagcgtaagttgatgtatttggtacaaattttgaaccaaattcattaatttttgttgaccaat 47543620  T
Q  250 tt 251  Q
    ||    
T  47543619 tt 47543618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 37918905 - 37918999
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||  ||||||||||| |||||||||||   |||||  ||||| ||||||||| || ||||||| ||||||||||||| ||||||||||||    
T  37918905 tactcccatcgtcccaaaatgtaagcaaaaatgaatcaacataagttgatgtatttgatataaattttaaaccaaatacattcacttttgttgac 37918999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 48050938 - 48051023
Alignment:
Q  185 gtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagacc 270  Q
    |||||| ||||| |||||||||||| || ||| | |||||||||||| |||||| ||||||| |||||| ||||||||||| ||||    
T  48050938 gtcaacaaaagtaaatgtatttggtccacattatgaaccaaatacatcaactttagttgaccaatttgtctcttataaaaaggacc 48051023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 29855047 - 29855142
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||| |  ||||||||||||||| ||||||  ||||| |||||| |||||||||||  ||| |||  || |||||||||||||||||||||    
T  29855047 tatactcccacaatcccaaaatataagcgaaaattaatcaacaaaagttgatgtatttggttaaaaatttgtacgaaatacattaacttttgttga 29855142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 31784854 - 31784773
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacatt 232  Q
    ||||||||| |||||||||| |||||||||||| ||||||  ||||| |||||| |  |||||||||| ||| |||||||||    
T  31784854 tactccctctgtcccaaaatgtaagcaaaaatttgtcaacataagttgatgtatctaatacaaattttgaacaaaatacatt 31784773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 30693322 - 30693406
Alignment:
Q  147 catatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    ||||||| |||||||||| |||||||||  |||||||| ||||| ||| |||||||||||| | |||| |||  |||||||||||    
T  30693322 catatacaccctccgtccgaaaatataaataaaaattgatcaacaaaaattaatgtatttgattcaaaatttgtaccaaatacat 30693406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 48051004 - 48050913
Alignment:
Q  179 aaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagacc 270  Q
    |||||||||||| |||||| ||||||||||| || | | |  |||||||||||| ||||||||||||   ||||| ||||||||||| ||||    
T  48051004 aaattggtcaactaaagttgatgtatttggttcataatgtggaccaaatacatttacttttgttgacaagtttgtgtcttataaaaaggacc 48050913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 5056409 - 5056319
Alignment:
Q  155 ccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||| |||||||||||||| ||||||||||||||  ||| |||| ||||||| | |||| |||  | ||||||||| ||||| |||||||    
T  5056409 ccctctgtcccaaaatataaacaaaaattggtcaataaaaattaacgtatttgattcaaaatttgtatcaaatacatcaacttatgttgac 5056319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 5069731 - 5069669
Alignment:
Q  84 aaaactttcttgttttggatgtttaaccaatg-ccttggagacactgtttagcattccccaaa 145  Q
    ||||||| |||||||||||||||||||||||| || | | ||||||||||| |||||||||||    
T  5069731 aaaacttacttgttttggatgtttaaccaatgcccctagggacactgtttaacattccccaaa 5069669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 47543590 - 47543676
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactt 237  Q
    ||||||||| |||  |||||||||  |||||||||||||| ||| |||||| ||||||| |||| |||  ||||||||||| |||||    
T  47543590 tactccctctgtcttaaaatataataaaaaattggtcaacaaaaattaatgaatttggttcaaaatttgtaccaaatacatcaactt 47543676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 6061493 - 6061546
Alignment:
Q  193 aagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||||||| | ||||||||||| || |||||||||||| |||||||||||    
T  6061493 aagttaatgtatctagtacaaattttaaaacaaatacattaatttttgttgacc 6061546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 19758384 - 19758335
Alignment:
Q  157 ctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    |||||||  |||||||||| |||||||||||||| |||||||||||||||    
T  19758384 ctccgtcataaaatataagtaaaaattggtcaacaaaagttaatgtattt 19758335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 24024044 - 24023959
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaac 235  Q
    ||||||| ||||||| |||||||||  |||||||| ||||| ||||||||||||| |||| |||| |||  | || ||||||||||    
T  24024044 atactccatccgtcctaaaatataacaaaaaattgatcaacaaaagttaatgtatgtggttcaaaatttgcatcagatacattaac 24023959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 30693406 - 30693361
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||||||||||||| || |||||||||||| |||||||||    
T  30693406 atgtatttggtacaaattttgaatcaaatacattaatttttgttga 30693361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 35310359 - 35310315
Alignment:
Q  163 cccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||    
T  35310359 cccaaaatataagtaaaaattggtcaacaaaaattaatgtatttg 35310315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 30295910 - 30295993
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    ||||||||| |||||| ||||||| |||  ||||||||||||| ||||||| |||||||| | ||||  ||  |||||||||||    
T  30295910 atatactccttccgtctcaaaatacaagttaaaattggtcaacaaaagttattgtatttgattcaaaaattataccaaatacat 30295993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 38067254 - 38067215
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaa 189  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  38067254 atactccctccctcccaaaatataaggaaaaattggtcaa 38067215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 14984895 - 14984837
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | ||||||||||||||    
T  14984895 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 14984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 39402038 - 39402100
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagtat 284  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||| |||||||||    
T  39402038 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 39402100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 44955278 - 44955336
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| |||||||||||||||  | ||||||||||| | |||||||| |||||    
T  44955278 ccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 602756 - 602801
Alignment:
Q  24 tgtcttggaaatataaagtgttacttttgagcaaataataattaca 69  Q
    |||||| ||||||||||||||||||||||| |||| ||| ||||||    
T  602756 tgtcttagaaatataaagtgttacttttgatcaaaaaatgattaca 602801  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 6787292 - 6787259
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  6787292 atatactccctccgtcccataatataagcaaaaa 6787259  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 24023959 - 24024008
Alignment:
Q  195 gttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||| || | |||||||| ||||| |||||||||||||||||||    
T  24023959 gttaatgtatctgatgcaaattttgaaccacatacattaacttttgttga 24024008  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 25990625 - 25990658
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  25990625 atatactccctccgtcctaaaatataagcaaaaa 25990658  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 31262804 - 31262841
Alignment:
Q  32 aaatataaagtgttacttttgagcaaataataattaca 69  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  31262804 aaatataaagtgttatttttgaccaaataataattaca 31262841  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 3694026 - 3694078
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||||  |||||||||| || |||||||||||| ||||||||||| ||||    
T  3694026 atgtatttaatacaaattttgaatcaaatacattaatttttgttgaccaattt 3694078  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 3694106 - 3694050
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    |||| ||||||  |||||||||||| | |||||||||||| ||| ||||||||||||    
T  3694106 tacttcctccgctccaaaatataagtagaaattggtcaacaaaaattaatgtatttg 3694050  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 3761535 - 3761579
Alignment:
Q  221 accaaatacattaacttttgttgacctatttgtttcttataaaaa 265  Q
    ||||||||||| |||||||||||||  |||| |||||||||||||    
T  3761535 accaaatacatcaacttttgttgacaaatttatttcttataaaaa 3761579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 15959940 - 15959908
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||| ||||||||||||||    
T  15959940 tatactccctccgtcccataatataagcaaaaa 15959908  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 19610867 - 19610795
Alignment:
Q  193 aagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaa 265  Q
    ||||| |||||||| || || ||| | ||| |||||||| || ||||||||||| |||||| |||||||||||    
T  19610867 aagttgatgtatttagtccatattatgaactaaatacatcaatttttgttgacccatttgtatcttataaaaa 19610795  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 30295993 - 30295941
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||||||| || |||| || |||||||| ||||||||||||||| ||||    
T  30295993 atgtatttggtataatttttgaatcaaatacaataacttttgttgaccaattt 30295941  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 397
Target Start/End: Original strand, 42062116 - 42062160
Alignment:
Q  353 ttgattctttgtctgcgtctcctttcagcttctctatgactcttg 397  Q
    |||||||| | ||||||||| ||||||||||| ||||||||||||    
T  42062116 ttgattctctctctgcgtcttctttcagcttcactatgactcttg 42062160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 44955302 - 44955238
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccta 248  Q
    ||||||| ||||| |||||||||||    |||||||||| | |||||| ||||||||||||||||    
T  44955302 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccta 44955238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 46949198 - 46949230
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||| ||||||||||||||||    
T  46949198 tatactccctccgtcctaaaatataagcaaaaa 46949230  T

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Target: chr2 (Bit Score: 86; Significance: 7e-41; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 31469183 - 31469090
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  31469183 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttgatacaaatttttaaccaaatacattaacttttgttgaccaattt 31469090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 10459385 - 10459285
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatt 250  Q
    |||||||||||||||||||| |||||||| ||||||||||  ||||| ||| || || |||||||||| ||||||||||||||||||||||||||| |||    
T  10459385 tactccctccgtcccaaaatgtaagcaaagattggtcaacataagttgatgcatctgatacaaattttgaaccaaatacattaacttttgttgaccaatt 10459286  T
Q  251 t 251  Q
    |    
T  10459285 t 10459285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 31469068 - 31469162
Alignment:
Q  157 ctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||| |||  | |||||||||||||||| ||||||| ||||    
T  31469068 ctccgtcccaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtatcaaatacattaactttcgttgaccaattt 31469162  T

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Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 944891 - 944797
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||||||| |||||| |||| ||||||| ||||||  ||||| |||||||||||||||||||| ||| |||||||||||||||| ||||    
T  944891 atactccctccgtctcaaaatgtaagtaaaaattagtcaacataagttgatgtatttggtacaaattttgaactaaatacattaacttttattga 944797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 10459251 - 10459320
Alignment:
Q  145 aacatatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  10459251 aacaaatactccctccttcccaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttcaaa 10459320  T

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Target: chr2; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 38935353 - 38935447
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||| ||| ||||||||||||||||||||||  ||||||  ||||| ||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  38935353 atactcactctgtcccaaaatataagcaaaaatgagtcaacataagttgatgtatttgatacagattttgaacaaaatacattaacttttgttga 38935447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 41374645 - 41374557
Alignment:
Q  154 tccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| | |||| |||  ||||||||||| ||||| ||||    
T  41374645 tccctccgtctcaaaatataagtaaaaattagtcaacgaaagttaatgtatttgattcaaagtttataccaaatacatcaacttgtgtt 41374557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 16180432 - 16180521
Alignment:
Q  157 ctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||||||||| |||||||||||| ||||||  || || |||||||   || ||||||| |||||||||||||||||||||||||||    
T  16180432 ctccgtcccaaaatgtaagcaaaaattagtcaacataaattgatgtattaaatataaattttgaaccaaatacattaacttttgttgacc 16180521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 43398831 - 43398920
Alignment:
Q  153 ctccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    ||||||| || | ||||| |||| |||||| ||||||   ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  43398831 ctccctctgttctaaaatgtaagtaaaaatgggtcaatataagttgatgtatttggtacaaattttgaaccaaatacattaacttttgtt 43398920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 17437246 - 17437166
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaataca 230  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||| || |||| |||  ||||||||||    
T  17437246 atactccctccgtcccaaaatataaacaaaaatttgtcaacaaaaattaatgtatttagttcaaaatttgtaccaaataca 17437166  T

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Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 19924420 - 19924329
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||||||||| | |||| ||   | |||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||| |||||    
T  19924420 tactccctccgtcccaaattgtaagtaa---tgggtcaacgtaagttgatgtatttggtacaaattttgaaccatatacattaacttttattgac 19924329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 13724199 - 13724108
Alignment:
Q  183 tggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    |||||||| |||||| |||||| |||| ||| ||||||||||||||||| ||||||||||||||||  ||| |||| |||| | ||||||||    
T  13724199 tggtcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggag 13724108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 29291183 - 29291120
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||| ||||    
T  29291183 tactccctccgtcccaaaatgtaagcaaaaattggtcaataaaagttaatatatttggttcaaa 29291120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 33829378 - 33829443
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    |||| ||||| ||||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||    
T  33829378 tatattccctacgtcccaaaatataaacaaaaattggtcaacaaaaattaatatatttggtacaaa 33829443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 43042285 - 43042192
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||| ||||||||| |||||||||||  || ||| |||||| |||||| || || ||||||| |||| |||||||||| |||||||||    
T  43042285 tactccctccatcccaaaatgtaagcaaaaatgagtaaacaaaagttgatgtatctgatataaattttgaaccgaatacattaaattttgttga 43042192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 24037575 - 24037675
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatt 250  Q
    |||||| ||||||| ||||| |||||||||||  ||||||  ||||| || ||||||||||||||||| ||| |||||||| ||||| ||| |||| |||    
T  24037575 tactccatccgtcctaaaatgtaagcaaaaatgagtcaacataagttgatatatttggtacaaattttgaacaaaatacatcaacttatgtcgacccatt 24037674  T
Q  251 t 251  Q
    |    
T  24037675 t 24037675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 35311190 - 35311269
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||| ||||||||||| |||||||  |||||| | ||| | ||||||||||| ||||||||||||||||||||||||||    
T  35311190 caaaatgtaagcaaaaatgggtcaacataagtta-tatatcttgtacaaattttgaaccaaatacattaacttttgttgac 35311269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 41099090 - 41099030
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttt 218  Q
    ||||| ||||||| ||||||||||| |||||||  ||||||||||||||||||||||||||    
T  41099090 tccgttccaaaatgtaagcaaaaatgggtcaacataagttaatgtatttggtacaaatttt 41099030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 13062220 - 13062177
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaa 265  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  13062220 ccaaatacattaacttttgttgacccatttgtttcttataaaaa 13062177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 18007506 - 18007585
Alignment:
Q  167 aaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||| ||||||||| |||| ||||||| || |||||||||||||||||  ||||||||| |||| |||| ||||||    
T  18007506 aaatataaacaaaaattgatcaaagaaagttgatatatttggtacaaattttggaccaaatacgttaattttttttgacc 18007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 16564494 - 16564420
Alignment:
Q  152 actccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaa 226  Q
    ||||| ||||||||||||| |||| ||||||  ||||||  ||||| |||||||||||||||||||| |||||||    
T  16564494 actccttccgtcccaaaatgtaagtaaaaatgagtcaacataagttgatgtatttggtacaaattttgaaccaaa 16564420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 43398947 - 43398857
Alignment:
Q  161 gtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||||| ||| |||||||| || ||| |||||||||||||||||| |||| |||  ||||||||||| ||||| | |||||| ||||    
T  43398947 gtcccaaaatctaaacaaaaatttgttaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcaacttatattgacccattt 43398857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 944776 - 944856
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||||||||| | ||||  ||||||||||||||| || |||| |||  ||||||||||| ||||| |||||||    
T  944776 caaaatataagcaaaaatcgatcaataaaagttaatgtatttagttcaaaatttgtaccaaatacatcaacttatgttgac 944856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 2884246 - 2884310
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    ||||||| ||||||| |||||||||| ||||||| |||||| ||| |||||||||||||| ||||    
T  2884246 atactccatccgtcctaaaatataagtaaaaatttgtcaacaaaaattaatgtatttggttcaaa 2884310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 11386431 - 11386335
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||| || |||  |||||||||||||||| ||| |||||  ||||| ||||||||| |||||||||| ||  ||||| ||||| |||||||||    
T  11386431 atatactctcttcgtttcaaaatataagcaaaatttgatcaacataagttgatgtatttgatacaaattttgaattaaatatattaatttttgttga 11386335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 16180543 - 16180491
Alignment:
Q  162 tcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||||| ||||    
T  16180543 tcccaaaatataagtaaaatttggtcaacaaaagttaatgtatttggttcaaa 16180491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 7932749 - 7932828
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||||||||| |||||| |||||||| ||||||||| |||| |||  | || |||||| ||||| |||||||    
T  7932749 aaaatataagcaaaaattagtcaacaaaagttaacgtatttggttcaaaatttatatcagatacatcaacttatgttgac 7932828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 38935483 - 38935388
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||||| ||||||| ||||||||| ||||||||  ||||| ||||||||||||||| || |||| | |  | ||||||||| ||||| |||||||    
T  38935483 atactccatccgtccaaaaatataaacaaaaattactcaacaaaagttaatgtattttgttcaaaatctgtatcaaatacatcaacttatgttgac 38935388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 41374519 - 41374614
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||||| | ||| ||||||| |||||||||||  || |||  ||||| |||||||||||| ||| ||| || |||||||||||||||| ||||||    
T  41374519 atactccttacgttccaaaatgtaagcaaaaatgagtgaacacaagttgatgtatttggtataaactttgaatcaaatacattaactttcgttgac 41374614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 41912075 - 41912178
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttct 257  Q
    ||||||| |||||| ||| ||||||  ||||||  |||||||| ||  ||||||||||||| ||||| ||||||||| ||||||||| | |||| || ||    
T  41912075 tccgtcctaaaatacaagtaaaaataagtcaacataagttaatctagctggtacaaattttgaaccagatacattaatttttgttgaacaattttttgct 41912174  T
Q  258 tata 261  Q
    ||||    
T  41912175 tata 41912178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 2949034 - 2949088
Alignment:
Q  152 actccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    |||||||||||| |||||| ||||||||||||||| ||| |||| ||||||||||    
T  2949034 actccctccgtctcaaaatgtaagcaaaaattggttaacaaaagctaatgtattt 2949088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 16243855 - 16243913
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| |||||||||||||||  | ||||||||||| | ||||||||||||||    
T  16243855 ccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagta 16243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 11714907 - 11714802
Alignment:
Q  182 ttggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtag 281  Q
    ||||||||| |||||| || |||||||| || | | |  |||||| ||||||| |||||||||||  ||||||| |||||||||| |||||||  ||||     
T  11714907 ttggtcaactaaagttgatatatttggttcataatgtggaccaaaaacattaaattttgttgaccactttgttttttataaaaaataccggagggagtat 11714808  T
Q  282 tatttt 287  Q
    ||||||    
T  11714807 tatttt 11714802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 17437166 - 17437211
Alignment:
Q  200 tgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  17437166 tgtatttggtacaaattttgaactaaatacattaatttttgttgac 17437211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 9021501 - 9021441
Alignment:
Q  84 aaaactttcttgttttggatgtttaaccaatgc-cttggagacactgtttagcattcccca 143  Q
    ||||||||||| ||||||||  ||||||||||| ||||||| ||||||||| |||||||||    
T  9021501 aaaactttcttattttggatacttaaccaatgctcttggaggcactgtttaacattcccca 9021441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 11686169 - 11686261
Alignment:
Q  182 ttggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    ||||||||| |||||| || |||||||| || | | |  |||||| ||||||| |||||||||||  ||||||| |||||||||| |||||||    
T  11686169 ttggtcaactaaagttgatatatttggttcataatgtggaccaaaaacattaaattttgttgaccactttgttttttataaaaaataccggag 11686261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 14740502 - 14740582
Alignment:
Q  185 gtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaa 265  Q
    |||||| |||| |||||||||| || |||||||||||||| |||||| |  ||| |||||| ||  |||||||||||||||    
T  14740502 gtcaacaaaaggtaatgtatttcgtccaaatttttaaccagatacatcacatttagttgacttaaatgtttcttataaaaa 14740582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 14781910 - 14781966
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    |||||| | |||||| |||||||||| |||||||| | |||||||||||||||||||    
T  14781910 atactctcaccgtcctaaaatataagtaaaaattgattaacgaaagttaatgtattt 14781966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 16564376 - 16564461
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||||| |||||||||||||||||||||| || || ||||  || |||||| |||| |||  ||||||||||| ||||| |||||||    
T  16564376 tccgtcctaaaatataagcaaaaattggtctacaaacgtta--gtgtttggttcaaaatttgtaccaaatacatcaacttatgttgac 16564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 4224983 - 4225062
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||| |||| |||||||||  || || |||||| ||||| ||||||| || |||||||  ||||||||||||||    
T  4224983 aaaatataagtaaaagttggtcaacataaattgatgtatctggtataaattttgaatcaaatacgataacttttgttgac 4225062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 8701817 - 8701778
Alignment:
Q  142 caaaacatatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  8701817 caaaacatctactccctccgtcccaaattataagcaaaaa 8701778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 30517959 - 30517875
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||||||| ||||||| |||||| ||| |||||||||||| | ||||  || |||||||| ||| |||||||||| ||| ||||    
T  30517959 caaaatataagtaaaaatttgtcaacaaaaattaatgtatttgatccaaa--ttgaaccaaatgcatcaacttttgtttaccgattt 30517875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 35693992 - 35693937
Alignment:
Q  196 ttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||||||| ||| |||||| ||||||||||||||| |||| |||||| ||||    
T  35693992 ttaatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattt 35693937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 37104931 - 37104880
Alignment:
Q  192 aaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttg 243  Q
    |||||||||||||||||| |||||| |||| ||||||||| || ||||||||    
T  37104931 aaagttaatgtatttggttcaaattcttaatcaaatacatcaatttttgttg 37104880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 12170487 - 12170433
Alignment:
Q  192 aaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||||||||||||    |||||||||| |||||||| ||||||||||||||    
T  12170487 aaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 12170433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 21539632 - 21539666
Alignment:
Q  147 catatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||| ||||||||||||||||    
T  21539632 catatactccctccgtcctaaaatataagcaaaaa 21539666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 45294360 - 45294421
Alignment:
Q  186 tcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccta 248  Q
    ||||| |||||||||||||| ||   || ||||||||||||||| ||||||||||||||||||    
T  45294360 tcaacaaaagttaatgtatt-ggactaattttttaaccaaatactttaacttttgttgaccta 45294421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 2884330 - 2884281
Alignment:
Q  196 ttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||| |||||| || ||||||| ||||||||||||||| ||||||||||    
T  2884330 ttaatatatttgatataaattttgaaccaaatacattaatttttgttgac 2884281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 10069303 - 10069242
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||||| ||||||||||||| | || ||| |||||||||| |||||| ||||||| |||||    
T  10069303 ggtcaacaaaagttaatgtatctagtccaattttttaaccagatacataaacttttattgac 10069242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 11617237 - 11617204
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||||| ||||||||||||    
T  11617237 atatactccctccgtcccaaattataagcaaaaa 11617204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 14166749 - 14166798
Alignment:
Q  220 aaccaaatacattaacttttgttgacctatttgtttcttataaaaaagac 269  Q
    |||||||||||| |||||||||||||  |||||| |||||| ||||||||    
T  14166749 aaccaaatacataaacttttgttgactcatttgtctcttattaaaaagac 14166798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 15660771 - 15660714
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    ||||||| || |||| ||||||||||||||||||| |||||  || ||||||||||||    
T  15660771 atactccatcagtcctaaaatataagcaaaaattgatcaacacaaattaatgtatttg 15660714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 23227370 - 23227289
Alignment:
Q  182 ttggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaa 263  Q
    ||||||||| |||||| ||||||||||| |||||| |||  || |||||| |  |||||||||||||  | |||||||||||    
T  23227370 ttggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttcttataaa 23227289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 35311305 - 35311240
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattg-gtcaacgaaagttaatgtatttggtacaaa 214  Q
    ||||||||||| || |||||| |||| |||||||  |||||| |||||||||||||||||| ||||    
T  35311305 atactccctccttcacaaaatgtaagaaaaaatttagtcaacaaaagttaatgtatttggttcaaa 35311240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 40713991 - 40714040
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgaccta 248  Q
    ||||||||||| || ||| | |||||||||||| ||||||||||||||||    
T  40713991 atgtatttggtccatattatgaaccaaatacatcaacttttgttgaccta 40714040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 42251634 - 42251581
Alignment:
Q  85 aaactttcttgttttggatgtttaaccaatgccttggagacactgtttagcatt 138  Q
    |||||| ||||||||||||| |||||||||||| | ||||||||  ||||||||    
T  42251634 aaacttacttgttttggatgcttaaccaatgcccttgagacactagttagcatt 42251581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 3201544 - 3201504
Alignment:
Q  141 ccaaaacatatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||| ||||| ||||||||||||| ||||||||||||    
T  3201544 ccaaaacaaatacttcctccgtcccaaattataagcaaaaa 3201504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 6110469 - 6110437
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||| ||||||||||||||    
T  6110469 tatactccctccgtcccataatataagcaaaaa 6110437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 7932820 - 7932768
Alignment:
Q  193 aagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||| |||||| || || ||||||| |||||||||| |||||||||||||||    
T  7932820 aagttgatgtatctgatataaattttgaaccaaatacgttaacttttgttgac 7932768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 10814852 - 10814932
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    |||||||||||  |  |||||||| ||||||||||||||  |||||  ||||||||| | ||||||||  |||||||||||    
T  10814852 tactccctccggtctcaaatataaacaaaaattggtcaaacaaagtggatgtatttgattcaaattttagaccaaatacat 10814932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 12320214 - 12320270
Alignment:
Q  192 aaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccta 248  Q
    |||||| |||||||||||  ||| | ||||||||||||||||  |||||||||||||    
T  12320214 aaagttgatgtatttggtctaaactcttaaccaaatacattacattttgttgaccta 12320270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 16734815 - 16734875
Alignment:
Q  182 ttggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    ||||||||| |||||| |||||| |||    ||||||||||||||||||| ||||||||||    
T  16734815 ttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtt 16734875  T

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Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 19924295 - 19924390
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||| |||| ||||||| |||| |||| || |||||  ||||||||||||| |||| |||| |||  ||||||||||| |||||  |||||||    
T  19924295 atactccc-ccgttccaaaatgtaagtaaaagttagtcaataaaagttaatgtatatggttcaaaatttgtaccaaatacatcaacttacgttgacc 19924390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 280
Target Start/End: Original strand, 23986820 - 23986908
Alignment:
Q  192 aaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| | || | |||||||| ||| |||||||| || ||||||||||  |  ||||||||||||| |||||| || ||||||    
T  23986820 aaagttaatgtttctgatccaaattttgaactaaatacataaagttttgttgactcaaatgtttcttataaataagaccagatatagta 23986908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 27280020 - 27280052
Alignment:
Q  216 ttttaaccaaatacattaacttttgttgaccta 248  Q
    ||||||||| |||||||||||||||||||||||    
T  27280020 ttttaaccagatacattaacttttgttgaccta 27280052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 16866391 - 16866492
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    ||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  16866391 atactccctccatcccaaaatataagcaaaaattgatcaataaaagttaatgtattaggtacaaatttttaaccaaatacattaacttttgttgaccaat 16866490  T
Q  250 tt 251  Q
    ||    
T  16866491 tt 16866492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 3719866 - 3719961
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||| |||| |||||||||||| | |||||||||||||| ||||||| |||||||||| ||||||||| || | |||||| ||||| ||||||    
T  3719866 tatactcactccatcccaaaatatatgtaaaaattggtcaactaaagttagtgtatttggttcaaattttttacgagatacatcaacttatgttga 3719961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 18731990 - 18732081
Alignment:
Q  160 cgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||||||||||||||||||| | |||||  || || |||||| ||||| ||||||| |||||||||||||||||||| |||||| ||||    
T  18731990 cgtcccaaaatataagcaaaaatggatcaacataaattgatgtatctggtataaattttgaaccaaatacattaacttttattgaccaattt 18732081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 27147590 - 27147665
Alignment:
Q  153 ctccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaata 228  Q
    |||||||||| | |||||||||| ||||||| |||||| |||||||||||||||| |||||||||| ||| |||||    
T  27147590 ctccctccgttctaaaatataagtaaaaattagtcaacaaaagttaatgtatttgatacaaattttaaactaaata 27147665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 16866501 - 16866427
Alignment:
Q  170 tataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||| |||  ||| ||||||||||||||| ||||    
T  16866501 tataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtacctaatacattaacttttattga 16866427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 36894989 - 36894927
Alignment:
Q  84 aaaactttcttgttttggatgtttaaccaatg-ccttggagacactgtttagcattccccaaa 145  Q
    |||||||||||||||||||||||||||||||| || ||| | |||||||||||||||||||||    
T  36894989 aaaactttcttgttttggatgtttaaccaatgcccctgggggcactgtttagcattccccaaa 36894927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 5026141 - 5026217
Alignment:
Q  161 gtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactt 237  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||| || |||| |||  ||||||||||| |||||    
T  5026141 gtcccaaaatataagcaaaaattggttaacaaaagttaatatatttagtccaaaatttgtaccaaatacatcaactt 5026217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 6803297 - 6803353
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    |||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||    
T  6803297 atactcactctgtcccaaaatataagcaaaatttggtcaacaaaagttaatgtattt 6803353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 44816538 - 44816494
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttg 243  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  44816538 atgtatttggtacaaattttgaaccaaatacattaacttttgttg 44816494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 246
Target Start/End: Complemental strand, 6803426 - 6803331
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||| ||||||| |||||  |||||||||   ||||||  |||||   |||||||||||||||||| ||| |||||||||||||||||||||||    
T  6803426 tactccttccgtcctaaaatgcaagcaaaaacgagtcaacacaagttggcgtatttggtacaaattttaaactaaatacattaacttttgttgacc 6803331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 27235340 - 27235222
Alignment:
Q  24 tgtcttggaaatataaagtgttacttttgagcaaataataattacaacannnnnnnngtaaaaactttcttgttttggatgtttaaccaatgcct-tgga 122  Q
    ||||||||||||||||||||||| |||| |  ||||||| |||||| ||        || ||||||||||||||||||||||||||| ||| ||| | ||    
T  27235340 tgtcttggaaatataaagtgttattttttactaaataatgattacatcatttttgt-gtgaaaactttcttgttttggatgtttaactaatacctctaga 27235242  T
Q  123 gacactgtttagcattcccc 142  Q
    | ||||||||||||||||||    
T  27235241 ggcactgtttagcattcccc 27235222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 3769742 - 3769834
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgt 241  Q
    |||||||| ||||| |||||||  ||| ||||||  ||||||  ||||| ||||||||  |||||||||| ||| ||||||||||||||||||    
T  3769742 tatactccatccgttccaaaatgcaagtaaaaatgagtcaacacaagttgatgtatttaatacaaattttaaactaaatacattaacttttgt 3769834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 24098007 - 24097963
Alignment:
Q  224 aaatacattaacttttgttgacctatttgtttcttataaaaaaga 268  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  24098007 aaatacattaaattttgttgacctaattgtttcttataaaaaaga 24097963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 14773581 - 14773502
Alignment:
Q  160 cgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    |||| ||||||||||| ||||||  ||||||| ||||| |||||| || || ||||||| ||||| ||||||||||||||    
T  14773581 cgtctcaaaatataagtaaaaatgagtcaacgtaagttgatgtatctgatataaattttgaaccacatacattaactttt 14773502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 15224033 - 15223954
Alignment:
Q  160 cgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    |||| ||||||||||| ||||||  ||||||| ||||| |||||| || || ||||||| ||||| ||||||||||||||    
T  15224033 cgtctcaaaatataagtaaaaatgagtcaacgtaagttgatgtatctgatataaattttgaaccacatacattaactttt 15223954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 3719982 - 3719896
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||| ||||||||||||| |||||  ||||| |||||| | ||| ||| ||| ||||||||||| ||||||| ||||||| ||||    
T  3719982 caaaatgtaagcaaaaattgatcaacataagttgatgtatctcgtaaaaaatttgaaccaaatacactaactttagttgaccaattt 3719896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 30794555 - 30794465
Alignment:
Q  156 cctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||| |||||| |||| |||| | | |||||  || | ||||||||||||||||||||| || |||||| ||||| |||||||||||    
T  30794555 cctccgtctcaaaatgtaagtaaaattggatcaacataaatgaatgtatttggtacaaattttgaatcaaatatattaaattttgttgacc 30794465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 44816472 - 44816538
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    |||||| ||| |||||||||| |||| |||||||||||||||||| |||| |||  |||||||||||    
T  44816472 caaaatgtaaacaaaaattggccaacaaaagttaatgtatttggttcaaaatttgtaccaaatacat 44816538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 23971191 - 23971276
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||||||||||||   ||||   ||||| |||||||||||||||||||| ||| ||||| ||| | ||||||||||| ||||    
T  23971191 aaaatataagcaaaaataaatcaatataagttgatgtatttggtacaaattttgaactaaatatatttatttttgttgaccaattt 23971276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 24710704 - 24710793
Alignment:
Q  185 gtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    |||||| ||| |||||||||||||| || ||| |  | ||||||||| |||||||||||||| | |||| | ||||||||| ||||||||    
T  24710704 gtcaactaaatttaatgtatttggttcatattgtagatcaaatacatcaacttttgttgacccagttgtcttttataaaaaggaccggag 24710793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 47967990 - 47967937
Alignment:
Q  193 aagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||||||||| ||||||||||| ||| |||||||| || |||||||||||    
T  47967990 aagttaatgtatttagtacaaattttaaactaaatacataaatttttgttgacc 47967937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 251
Target Start/End: Complemental strand, 5026262 - 5026159
Alignment:
Q  145 aacatatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||| |||||||||| || ||||||||||| |||||   ||||    ||||| ||||||||||||||||||||  || ||||| ||||||||||||| |    
T  5026262 aacatctactccctccatctcaaaatataagtaaaaacgagtcat---aagttgatgtatttggtacaaattttggactaaatatattaacttttgttaa 5026166  T
Q  245 cctattt 251  Q
    || ||||    
T  5026165 ccaattt 5026159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 13591028 - 13591060
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaat 182  Q
    |||||||||||||||||||||||||||||||||    
T  13591028 atactccctccgtcccaaaatataagcaaaaat 13591060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 41434799 - 41434743
Alignment:
Q  13 aatataagttctgtcttggaaatataaagtgttacttttgagcaaataataattaca 69  Q
    ||||||| ||||||||| |||||||||| ||| |||||| | |||||||||||||||    
T  41434799 aatataatttctgtcttagaaatataaactgtcactttttatcaaataataattaca 41434743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 1554954 - 1554899
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    |||||||||||||| ||||||||| ||||||||||||||  |||||| | ||||||    
T  1554954 tactccctccgtcctaaaatataaacaaaaattggtcaataaaagttcacgtattt 1554899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 30483972 - 30483889
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgt 241  Q
    ||||||| |||||||||  |||||| ||||||   ||||| |||| |||||| |||||||| ||| |||||| |||||||||||    
T  30483972 tccgtcctaaaatataaagaaaaatcggtcaatataagttgatgtgtttggtccaaattttgaactaaatacgttaacttttgt 30483889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 94390 - 94448
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | ||||||||||||||    
T  94390 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 18732101 - 18732016
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||| ||||| |||| |||||||||||||  |||||||||||||||||| |||| |||  |||| |||||| || || ||||||    
T  18732101 tccgtcctaaaatgtaag-aaaaattggtcaataaaagttaatgtatttggttcaaaatttataccagatacatcaatttatgttga 18732016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 47967911 - 47967997
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||||||||||| ||||| | ||||||| ||| || |||||||| ||  ||| |||  || |||||||||||||| ||||||    
T  47967911 tccgtcccaaaatataaacaaaattcggtcaacaaaaatttatgtatttagtttaaaatttgtactaaatacattaacttatgttga 47967997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 18037884 - 18037921
Alignment:
Q  32 aaatataaagtgttacttttgagcaaataataattaca 69  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  18037884 aaatataaattgttacttttgatcaaataataattaca 18037921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 18096985 - 18096940
Alignment:
Q  220 aaccaaatacattaacttttgttgacctatttgtttcttataaaaa 265  Q
    ||||||||| || |||||||||||||| |||||| |||||||||||    
T  18096985 aaccaaataaatcaacttttgttgacccatttgtctcttataaaaa 18096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 20123980 - 20123947
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  20123980 atatactccctccgtcccataatataagcaaaaa 20123947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 25737577 - 25737610
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||||| ||||||||||||    
T  25737577 atatactccctccgtcccaaattataagcaaaaa 25737610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 25944436 - 25944469
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  25944436 atatactccctccgtcccataatataagcaaaaa 25944469  T

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Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 34515822 - 34515855
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  34515822 atatactccctccgtcctaaaatataagcaaaaa 34515855  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 40376834 - 40376785
Alignment:
Q  169 atataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttt 218  Q
    ||||||||||||||||||||| | ||||| ||| ||||||| ||||||||    
T  40376834 atataagcaaaaattggtcaaaggaagtttatgaatttggtccaaatttt 40376785  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 23314211 - 23314271
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagt 282  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||| |||||||    
T  23314211 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 23314271  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 32652446 - 32652490
Alignment:
Q  200 tgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||||||||| ||| ||||||||||||||| |||| ||||    
T  32652446 tgtatttggtacaaactttgaaccaaatacattaatttttattga 32652490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 35181068 - 35181100
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||| ||||||||||||||||    
T  35181068 tatactccctccgtcctaaaatataagcaaaaa 35181100  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 37928330 - 37928274
Alignment:
Q  82 taaaaactttcttgttttggatgtttaaccaatgccttggagacactgtttagcatt 138  Q
    ||||||||| ||| |||||||||||||||||||| | | ||||||||  ||||||||    
T  37928330 taaaaacttacttattttggatgtttaaccaatgtccttgagacactagttagcatt 37928274  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 45485846 - 45485878
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaat 182  Q
    ||||||||||||||||| |||||||||||||||    
T  45485846 atactccctccgtcccataatataagcaaaaat 45485878  T

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Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 413 - 510
Target Start/End: Original strand, 20139936 - 20140033
Alignment:
Q  413 tttctctccgatttggatttgtcacagttgatttcttctaactctttattatccatccaactctcaaacccgtggaatcttcttaaaggaggaagcat 510  Q
    |||||||| ||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20139936 tttctctctgattttgatttgtcacagttgatttcctctaactatttattatccatccaactctcaaacccgtagaatcttcttaaaggaggaagcat 20140033  T

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Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 22192933 - 22192836
Alignment:
Q  413 tttctctccgatttggatttgtcacagttgatttcttctaactctttattatccatccaactctcaaacccgtggaatcttcttaaaggaggaagcat 510  Q
    |||||||| ||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22192933 tttctctctgattttgatttgtcacagttgatttcctctaactatttattatccatccaactctcaaacccgtagaatcttcttaaaggaggaagcat 22192836  T

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Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 408 - 510
Target Start/End: Complemental strand, 31471856 - 31471754
Alignment:
Q  408 ttgattttctctccgatttggatttgtcacagttgatttcttctaactctttattatccatccaactctcaaacccgtggaatcttcttaaaggaggaag 507  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  || ||||||||| || || ||||||||||||||||||    
T  31471856 ttgattttctctccgattttgatttgtcacagttgatttcctctaactctttattatccatttaattctcaaacctgtagattcttcttaaaggaggaag 31471757  T
Q  508 cat 510  Q
    |||    
T  31471756 cat 31471754  T

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Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 31323933 - 31323833
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatt 250  Q
    ||||||||| |||||||||| ||||||||||| |||||||  ||||| |||||| ||||||||||||| ||| ||||||||||||||||||||||| |||    
T  31323933 tactccctctgtcccaaaatgtaagcaaaaataggtcaacataagttgatgtatctggtacaaattttgaacaaaatacattaacttttgttgaccaatt 31323834  T
Q  251 t 251  Q
    |    
T  31323833 t 31323833  T

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Target: chr6; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 28004614 - 28004708
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||| ||||| |||||||| || |||| |||| ||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  28004614 tactccctccgttccaaagtataagcataatttggccaacaaaaattaatgtatttggtacaaattttgagccaaatacattaacttttgttgac 28004708  T

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Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 31323804 - 31323905
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    |||||||||| | |||||||| ||||||||||||||||||| ||||||||||||||| || |||| |||  |||| |||||| ||||| |||||||||||    
T  31323804 atactccctctgacccaaaatgtaagcaaaaattggtcaacaaaagttaatgtattttgttcaaaatttgtaccagatacatcaacttatgttgacctat 31323903  T
Q  250 tt 251  Q
    ||    
T  31323904 tt 31323905  T

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Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 2282520 - 2282417
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacct 247  Q
    ||||||| |||||||||||| ||||||||||||||| || |||  || || ||||||||| ||||| |||| ||| |||||||||||||||||||||||     
T  2282520 atatacttcctccgtcccaatatataagcaaaaattagttaacataaattgatgtatttgatacaatttttgaactaaatacattaacttttgttgacca 2282421  T
Q  248 attt 251  Q
    ||||    
T  2282420 attt 2282417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 151 - 246
Target Start/End: Complemental strand, 30531297 - 30531202
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||||||||||||||| |||||||||||   |||||  ||||| |||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  30531297 tactccctccgtcccaaaatgtaagcaaaaatgactcaacataagttgatgtatttggtacaaactttgaaccaaatacatcaacttatgttgacc 30531202  T

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Target: chr6; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 14446818 - 14446720
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||||||||||||||||||| |||| ||||||||||||| | ||||| |||||| |  || ||||||| ||| | |||||||||||||||||||||    
T  14446818 atatactccctccgtcccaaaatgtaagtaaaaattggtcaatgtaagttgatgtatctaatataaattttgaacaacatacattaacttttgttgacc 14446720  T

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Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 28004743 - 28004650
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttg 243  Q
    ||||||| ||| ||||||||||||||  |||||| |||||| |||||||||||||||||  |||| |||  |||||||||||||| ||||||||    
T  28004743 atactccttccatcccaaaatataagggaaaattagtcaacaaaagttaatgtatttggctcaaaatttgtaccaaatacattaatttttgttg 28004650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 9675753 - 9675839
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactt 237  Q
    ||||||||||||| |||||| |||||||||||||||||||  ||||| ||| || |||||||||||||  |  ||||||||||||||    
T  9675753 tactccctccgtctcaaaatgtaagcaaaaattggtcaacataagttgatgcatctggtacaaattttgtattaaatacattaactt 9675839  T

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Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 28756663 - 28756706
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggt 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  28756663 aaaatataagcaaaatttggtcaacgaaagttaatgtatttggt 28756706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 14446684 - 14446740
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtat 204  Q
    |||||||||||  |||||||||| ||||||||| ||||||||| |||||||||||||    
T  14446684 atatactccctttgtcccaaaatgtaagcaaaagttggtcaacaaaagttaatgtat 14446740  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 8437813 - 8437859
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||    
T  8437813 atgtatttggtacaaattttgaatcaaatacattaatttttgttgac 8437859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 9829962 - 9829916
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  9829962 atgtatttggtacaaattttaaacaaaatacattaatttttgttgac 9829916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 30531169 - 30531262
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||||||   ||||||| ||||||||||  |||||||  ||||| ||||||||||| |||| |||  ||||||||||| ||||| ||||||    
T  30531169 atatactccctcc---ccaaaatgtaagcaaaaacgggtcaacataagttgatgtatttggttcaaagtttgtaccaaatacatcaacttatgttga 30531262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 13320930 - 13320849
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    ||||||||||| |  |||||||||||||| |||  ||||||||||||| |||||| ||||  |||||||  |||||||||||    
T  13320930 atactccctccataacaaaatataagcaacaatgagtcaacgaaagttgatgtatctggtctaaattttacaccaaatacat 13320849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 31522647 - 31522699
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||| ||||||||||||| || ||||| |||||||||||||||||| ||||    
T  31522647 atgtatctggtacaaattttgaatcaaatgcattaacttttgttgaccaattt 31522699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 31522726 - 31522671
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    |||||||| ||||||||||| ||||||||| ||||||||| |||||||||| |||||    
T  31522726 tactcccttcgtcccaaaatgtaagcaaaa-ttggtcaacaaaagttaatgcatttg 31522671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 35003882 - 35003790
Alignment:
Q  147 catatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    |||||||||| ||||||  ||||| |||||||||||   |||||  ||||| || ||||| ||||||||||| || |||||||||||| ||||    
T  35003882 catatactccatccgtcttaaaatgtaagcaaaaatgaatcaacataagttgatatattttgtacaaattttgaatcaaatacattaattttt 35003790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 8215281 - 8215231
Alignment:
Q  194 agttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||||||| |||||||||   ||||||||||||||| ||||||||    
T  8215281 agttaatgtatttgatacaaatttcagaccaaatacattaacatttgttga 8215231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 14936553 - 14936479
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttctt 258  Q
    ||||||| | |||| |||||||||| ||||||| ||||| | |||||| | ||||||||||||||  ||||||||    
T  14936553 ggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatgtttctt 14936479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 242
Target Start/End: Complemental strand, 33822410 - 33822316
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    ||||||||| | |||| |||||| |||| |||||| | | ||   ||||| ||||||||| |||||||||| ||| ||||| |||||||||||||    
T  33822410 atatactccattcgtctcaaaatgtaagtaaaaatggattaatataagttgatgtatttgatacaaattttgaactaaatatattaacttttgtt 33822316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 35031073 - 35031131
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| |||||||||||||||  | ||||||||||| | |||||||| |||||    
T  35031073 ccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 3788100 - 3788161
Alignment:
Q  213 aatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    |||| ||||| |||||||| ||||||||||||||||  | | ||||||||| ||||||||||    
T  3788100 aattgttaactaaatacatcaacttttgttgacctaaatttatcttataaataagaccggag 3788161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 5611212 - 5611249
Alignment:
Q  82 taaaaactttcttgttttggatgtttaaccaatgcctt 119  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  5611212 taaaaacttacttgttttggatgtttaaccaatacctt 5611249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 6069036 - 6068959
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttata 261  Q
    ||||||| ||||||||||||||||||  |||||||||||   |||| | | ||||||||||||||  | |||||||||    
T  6069036 ggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacctaaatatttcttata 6068959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 6330173 - 6330112
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagta 283  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||| ||||||||    
T  6330173 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagta 6330112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 7549781 - 7549822
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    |||||||||||||||||||||  || ||||||||||||||||    
T  7549781 aaaatataagcaaaaattggtgtacaaaagttaatgtatttg 7549822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 7549904 - 7549847
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    ||||| |||| || |||||||||||||||||||||||  || ||||||||| ||||||    
T  7549904 atacttcctcagttccaaaatataagcaaaaattggtgtacaaaagttaatatatttg 7549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 8437886 - 8437813
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    |||||| ||||||||||| |||| || |||||| ||| |||||||||||| | |||| |||  |||||||||||    
T  8437886 tccgtctcaaaatataagtaaaatttagtcaacaaaaattaatgtatttgattcaaaatttgtaccaaatacat 8437813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 9829891 - 9829976
Alignment:
Q  160 cgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||| ||||||||| ||||||| |||||| ||| ||||||||||| ||  ||| |||  ||||||||||| || || |||||||    
T  9829891 cgtccctaaatataagtaaaaattagtcaacaaaaattaatgtattttgtttaaaatttgtaccaaatacatcaatttatgttgac 9829976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 21542628 - 21542595
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||||| ||||||||||||    
T  21542628 atatactccctccgtcccaaattataagcaaaaa 21542595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 31223223 - 31223190
Alignment:
Q  84 aaaactttcttgttttggatgtttaaccaatgcc 117  Q
    ||||||| ||||||||||||||||||||||||||    
T  31223223 aaaacttacttgttttggatgtttaaccaatgcc 31223190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 31887403 - 31887370
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  31887403 atatactccctccgtcctaaaatataagcaaaaa 31887370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 11082197 - 11082229
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||||| ||||||||||||    
T  11082197 tatactccctccgtcccaaattataagcaaaaa 11082229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 28596065 - 28596129
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    |||||| ||||||  |||||| |||| |||||||||||||| ||| ||||| |||||||| ||||    
T  28596065 atactctctccgtttcaaaatgtaagtaaaaattggtcaacaaaaattaatatatttggttcaaa 28596129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 568 - 661
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||||||||| ||||||||||| ||||| ||| ||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||    
T  568 tactccctccgtcccaaagtataagcaaaatttggt-aacaaaagttaatttatttggtacaaattttgaactaaatacaataacttttgttgac 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 684 - 604
Alignment:
Q  162 tcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||||| || |||| |||  |||||||| |||||||||||||    
T  684 tcccaaaatataagtgaaaattagtcaacaaaagttattgtatttagttcaaaatttgtaccaaataaattaacttttgtt 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 179 - 274
Target Start/End: Complemental strand, 30443829 - 30443734
Alignment:
Q  179 aaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    |||||||||||| |||||| ||||||||||| || | | |  |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  30443829 aaattggtcaactaaagttgatgtatttggttcataatatagaccaaatacattaacttttgttgacccatttgtttcttataaaaaagacgggag 30443734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 32221468 - 32221555
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    ||||||||||||| ||||||||||||| ||| |  || || |||||||||||||||||||| ||||||||||||||||||||||||||    
T  32221468 tccgtcccaaaatgtaagcaaaaattgatcagcataaattgatgtatttggtacaaattttgaaccaaatacattaacttttgttgac 32221555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 46829163 - 46829068
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccta 248  Q
    |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||  | ||||     |||||||||||| ||||||||||||| |    
T  46829163 tatactcccttcgtcctaaaatataagcaaaaattggtcaacaaaagttaatgtatttg--ataaat-----accaaatacattgacttttgttgaccaa 46829071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 30443757 - 30443852
Alignment:
Q  179 aaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    |||| ||||||| ||||||||||||||||||  | ||| | |||||||||||| |||||| ||||||| |||||| |||| |||||| ||||||||    
T  30443757 aaatgggtcaacaaaagttaatgtatttggtctatattatgaaccaaatacatcaactttagttgaccaatttgtctcttgtaaaaaggaccggag 30443852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 32221588 - 32221509
Alignment:
Q  152 actccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    |||||||||||  |||||| |||||||||||| |||||| |||||||||||||||||| |||| |||  |||||||||||    
T  32221588 actccctccgtatcaaaatgtaagcaaaaattagtcaacaaaagttaatgtatttggttcaaaatttgtaccaaatacat 32221509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 46829047 - 46829133
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||       || | |||||||||||||||||||||||| ||||    
T  46829047 tccgtcctaaaatataagcaaaaattggtcaacaaaagtcaatgtatttggta-------tttatcaaatacattaacttttgttgaccaattt 46829133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 47783192 - 47783097
Alignment:
Q  156 cctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||| |||||||||||||||||||  ||||||  |||   |||||| || |||||||||| |||||||||||||||||||| |||||| ||||    
T  47783192 cctccgttccaaaatataagcaaaaatgagtcaacataagccgatgtatctgatacaaattttgaaccaaatacattaactttttttgaccaattt 47783097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 15282627 - 15282718
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    ||||||| || |||||||||||||||| ||||||| | |||||  ||||| ||| || || |||||||||| || |||||||||||||||||    
T  15282627 atatacttccgccgtcccaaaatataaacaaaaatggatcaacataagttgatgaatctgatacaaattttaaatcaaatacattaactttt 15282718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 26914440 - 26914533
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||| ||| |||||||||| |||||||||| ||| ||||  ||||| |||||||| ||| ||||||| ||||| ||||||||| |||||||||    
T  26914440 atactcactctgtcccaaaatgtaagcaaaaa-tggacaacttaagttgatgtatttagtataaattttgaaccacatacattaatttttgttga 26914533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 31280263 - 31280181
Alignment:
Q  162 tcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||  |||| |||||| | |||||  || ||||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  31280263 tcccaaaaggtaaggaaaaatggatcaacataaattaatgtatatggtacaaattttgaaccaaatacattaaattttgttga 31280181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 23314684 - 23314762
Alignment:
Q  170 tataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccta 248  Q
    ||||||||||| |||||||| ||||||| || || || || |||| |||||||||||||||||| ||||  ||||||||    
T  23314684 tataagcaaaagttggtcaaagaaagttgatatactttgtccaaaattttaaccaaatacattacctttctttgaccta 23314762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 31280161 - 31280239
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||| |||||||| ||||| ||| |||||||||||||| |||| |||  |||| ||||||||| || ||||||    
T  31280161 aaaatataagtaaaaattgatcaacaaaatttaatgtatttggttcaaaatttgtaccatatacattaatttatgttga 31280239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 52251955 - 52251993
Alignment:
Q  143 aaaacatatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  52251955 aaaacatatactccctccgtcctaaaatataagcaaaaa 52251993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 40905808 - 40905873
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||| |||| |||  |||| ||||||    
T  40905808 aaaatgtaagcaaaaattggtcaacaaaagttaatttatttggttcaaaatttataccagatacat 40905873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 2787904 - 2787968
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagtattt 286  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||||||||| |||||    
T  2787904 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtattattt 2787968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 40905873 - 40905821
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||| ||||| ||||||| ||||||||| ||||||||||||||||| ||||    
T  40905873 atgtatctggtataaattttgaaccaaataaattaacttttgttgaccaattt 40905821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 46733121 - 46733045
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    ||||| |||||||||||  ||||||| ||| | ||| ||||| |||||||||| || |||||||||||| |||||||    
T  46733121 aaaatgtaagcaaaaataagtcaacgtaagctgatgcatttgatacaaattttgaatcaaatacattaatttttgtt 46733045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 47783069 - 47783132
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    |||||| ||| | ||||||| |||| |||||||||||||  |||||||||||||||||| ||||    
T  47783069 tactccttccattccaaaatgtaagtaaaaattggtcaaaaaaagttaatgtatttggttcaaa 47783132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 33943028 - 33942966
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||| |||||||||||||||||    |||||||||| | |||||| ||||||||||||||    
T  33943028 ggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacc 33942966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 42170442 - 42170380
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||| ||||| |||||||||||    |||||||||||| |||||| ||||||||||||||    
T  42170442 ggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacc 42170380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 42170418 - 42170476
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| |||||||||||||||  | | ||||||||| |||||||||| |||||    
T  42170418 ccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 43323079 - 43323141
Alignment:
Q  170 tataagcaaaaattgg-tcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    |||||| ||||||||| ||||| |||||| ||||||||||   ||||||||||||||||||||    
T  43323079 tataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacat 43323141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 51406731 - 51406673
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| |||||||||||||||  | | ||||||||| |||||||||| |||||    
T  51406731 ccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 117
Target Start/End: Original strand, 11676821 - 11676854
Alignment:
Q  84 aaaactttcttgttttggatgtttaaccaatgcc 117  Q
    ||||||| ||||||||||||||||||||||||||    
T  11676821 aaaacttgcttgttttggatgtttaaccaatgcc 11676854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 22756913 - 22756958
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||||||| ||||||| || ||||||| ||||||||||||||    
T  22756913 atgtatttggtataaattttgaatcaaatacgttaacttttgttga 22756958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 26914555 - 26914482
Alignment:
Q  164 ccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactt 237  Q
    ||||||| ||||||||||||| ||||| ||| ||||||||| |||| |||| |||  || |||||||| |||||    
T  26914555 ccaaaatgtaagcaaaaattgatcaacaaaaattaatgtatgtggttcaaaatttatactaaatacatcaactt 26914482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 43753831 - 43753754
Alignment:
Q  186 tcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaa 263  Q
    ||||| |||||| ||||||||||| || | | |  | |||||||||||||||||||||||  |||||||| |||||||    
T  43753831 tcaaccaaagttgatgtatttggttcataatgtagatcaaatacattaacttttgttgactcatttgtttattataaa 43753754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 45610546 - 45610453
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||| |||||| ||| ||||| || || |||  ||||| ||| ||||| || |||| || ||||||||||||||| ||| ||||||||||||    
T  45610546 tccgtctcaaaatgtaaacaaaatttagttaacataagttgatgaatttgatataaatcttgaaccaaatacattaattttagttgacctattt 45610453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 4238652 - 4238588
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagtattt 286  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||| ||||| |||||    
T  4238652 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 4238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 18364282 - 18364203
Alignment:
Q  155 ccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaac 235  Q
    |||||||| ||||||| |||||||||| |||| |||  ||||| |||||| ||  ||||||||| ||| ||||||||||||    
T  18364282 ccctccgttccaaaatgtaagcaaaaa-tggttaacataagttgatgtatctgacacaaattttgaacaaaatacattaac 18364203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 26207695 - 26207731
Alignment:
Q  145 aacatatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||| || |||||||||||||||||||||    
T  26207695 aacatatactccttctgtcccaaaatataagcaaaaa 26207731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 37042328 - 37042360
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||||| ||||||||||||    
T  37042328 tatactccctccgtcccaaattataagcaaaaa 37042360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 43323141 - 43323077
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaa 263  Q
    |||||||||||  ||| ||| | |||||||||| |||||||||||||| | || |||||||||||    
T  43323141 atgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaa 43323077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 9e-19; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 12276940 - 12276844
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||| ||| | ||||||||||||||||||| |||||||  ||||| |||||||| ||| ||||||| || |||||||||||||||||| |||||    
T  12276940 atactccttccattccaaaatataagcaaaaataggtcaacataagttgatgtatttagtataaattttgaatcaaatacattaacttttgctgacc 12276844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 55762983 - 55762927
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg 207  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  55762983 tactccctccgtcccaaaatataaacaaaaattggtcaacaaaagttaatatatttg 55762927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 12276816 - 12276911
Alignment:
Q  156 cctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||||| |||||||||| ||| |||||||| | |||||||||||||||| | |||| |||  || |||||||| ||||| |||||||||||||    
T  12276816 cctccgtcctaaaatataagtaaagattggtcagcaaaagttaatgtatttgattcaaaatttatactaaatacatcaacttatgttgacctattt 12276911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 55827360 - 55827293
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttt 218  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||||||| ||||||||  |||||||    
T  55827360 tactccattcgtcccaaaatataagcaaaaattggtcaacaaaagttaatatatttggttaaaatttt 55827293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 2734170 - 2734228
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggt 209  Q
    |||||| |||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  2734170 tactccttccgtcccaaaatataagtaaaaattagtcaacaaaagttaatgtatttggt 2734228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 2871606 - 2871529
Alignment:
Q  162 tcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    ||||||||||||||||||||| ||| ||| |||||| |||||||| ||| |||||||| |||||||| || |||||||    
T  2871606 tcccaaaatataagcaaaaatcggtaaacaaaagttgatgtattttgtataaatttttgaccaaataaatcaactttt 2871529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 42286423 - 42286476
Alignment:
Q  221 accaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  42286423 accaaatacatcaacttttgttgaccaatttgtttcttataaaaaggaccggag 42286476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 54235227 - 54235306
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||| |||||||||||  |||||   || || |||||||| ||||||||||| |||||||||||||||||||||||||    
T  54235227 caaaatgtaagcaaaaatgagtcaatataaattgatgtatttagtacaaattttgaaccaaatacattaacttttgttga 54235306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 54009984 - 54010065
Alignment:
Q  160 cgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    |||||||||||||||||||||||||||||||  ||| |  | ||||||||| ||||||| || |||||||||||| |||||||    
T  54009984 cgtcccaaaatataagcaaaaattggtcaacataag-tgttctatttggtataaattttgaatcaaatacattaagttttgtt 54010065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 4423268 - 4423175
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||| |||| |||||||||| ||||||||||| | ||||   ||||| |||||||||||||||||||| || |||||| ||||| |||| ||||    
T  4423268 tacttcctctgtcccaaaatgtaagcaaaaatggatcaatataagttgatgtatttggtacaaattttgaatcaaatatattaatttttattga 4423175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 30315982 - 30316027
Alignment:
Q  229 cattaacttttgttgacctatttgtttcttataaaaaagaccggag 274  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||    
T  30315982 cattaacttttgttgacccatttgtttcttataaaaaggaccggag 30316027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 246
Target Start/End: Original strand, 44124222 - 44124317
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||||||||| ||||| |||||||||||| | |  | ||||||||| | |||||   ||| ||| |||||||| ||||||||||||||||||    
T  44124222 tactccctccgtccaaaaatgtaagcaaaaatttgccttcaaaagttaatatttttggacgaaaatttaaaccaaatgcattaacttttgttgacc 44124317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 55762905 - 55762955
Alignment:
Q  201 gtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||| ||||    
T  55762905 gtatttgctacaaatttttaatcaaatatattaacttttgttgaccaattt 55762955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 55827282 - 55827332
Alignment:
Q  201 gtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||| ||||    
T  55827282 gtatttgctacaaaattttaaccaaatatattaacttttgttgaccaattt 55827332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 10048533 - 10048618
Alignment:
Q  180 aattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaa 265  Q
    ||||||||||| ||| |||||||||||||| ||   | |  ||||||||||| ||||||||||||   ||||||||||||||||||    
T  10048533 aattggtcaactaaaattaatgtatttggttcaggatatagaccaaatacatcaacttttgttgattcatttgtttcttataaaaa 10048618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 18744926 - 18744885
Alignment:
Q  82 taaaaactttcttgttttggatgtttaaccaatgccttggag 123  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  18744926 taaaaacttgcttgttttggatgtttaaccaatgtcttggag 18744885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 21606110 - 21606057
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgt 202  Q
    ||||||| ||||||||||||||||||||||||  |||||| | |||||||||||    
T  21606110 tatactcactccgtcccaaaatataagcaaaatgtggtcagcaaaagttaatgt 21606057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 41615772 - 41615683
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccgga 273  Q
    ||||||| |||||||||||||||||    |||||||||| |||||||| |||||||||||| | | || | ||||||||| | |||||||    
T  41615772 ggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 54235342 - 54235261
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    ||||||||||| | |  |||||||| ||||||||| ||||| |||||||||||||||||| |||| |||  || ||||||||    
T  54235342 atactccctccattcttaaatataaacaaaaattgctcaacaaaagttaatgtatttggttcaaaatttgtactaaatacat 54235261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 3249756 - 3249704
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| |||| ||||    
T  3249756 atgtatctggtataaattttgaaccaaatacattaacttttgtcgaccaattt 3249704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 18508933 - 18508881
Alignment:
Q  154 tccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    ||||||| |||||||||  |||| ||||||||||||| |||||||||||||||    
T  18508933 tccctccatcccaaaatggaagcgaaaattggtcaacaaaagttaatgtattt 18508881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 245
Target Start/End: Original strand, 24980614 - 24980710
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||||| | ||||| |||| |||||| | |||||  ||||| |||||| ||  |||||||||  || ||||||||||| ||||||||||    
T  24980614 tatactccctccgttctaaaatgtaagtaaaaatggatcaacataagttgatgtatctgacacaaattttgtacaaaatacattaatttttgttgac 24980710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 30848592 - 30848683
Alignment:
Q  162 tcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttg--gtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||||| ||||||||||| | |||||  ||||| |||||| |   ||||||||||| ||| ||||||||||| ||||||||||| ||||    
T  30848592 tcccaaaatgtaagcaaaaatggatcaacataagttgatgtatctaatgtacaaattttgaacaaaatacattaatttttgttgaccaattt 30848683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 30848712 - 30848656
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    ||||||| ||||| | ||||| ||||||||||||||||||| ||| |||||||||||    
T  30848712 atactccatccgttctaaaatgtaagcaaaaattggtcaacaaaaattaatgtattt 30848656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 48514647 - 48514591
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    |||||| || ||||||| |||||||| |||||| |||||||||||||||||| ||||    
T  48514647 tccgtctcacaatataaacaaaaattagtcaacaaaagttaatgtatttggtccaaa 48514591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 18995137 - 18995210
Alignment:
Q  164 ccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    |||||||||||||||||| | |||||  || ||| |||||| || |||||||||| ||||||||||||||||||||    
T  18995137 ccaaaatataagcaaaaagtagtcaaataa-gttgatgtatctg-tacaaattttgaaccaaatacattaactttt 18995210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 24980744 - 24980681
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    ||||| ||| ||| |||||| |||||||||||| |||||| ||| ||||||||||| |||||||    
T  24980744 tactctctctgtctcaaaatgtaagcaaaaatttgtcaacaaaaattaatgtattttgtacaaa 24980681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 55617013 - 55617084
Alignment:
Q  164 ccaaaatataagcaaaaattggtcaacg-aaagttaatgtatttggtacaaatttttaaccaaatacattaa 234  Q
    ||||||||||||||||||| ||| |||  ||| ||||||||||| |||||||||||  || |||||||||||    
T  55617013 ccaaaatataagcaaaaataggttaacataaaattaatgtatttagtacaaattttatactaaatacattaa 55617084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 55624317 - 55624388
Alignment:
Q  164 ccaaaatataagcaaaaattggtcaacg-aaagttaatgtatttggtacaaatttttaaccaaatacattaa 234  Q
    ||||||||||||||||||| ||| |||  ||| ||||||||||| |||||||||||  || |||||||||||    
T  55624317 ccaaaatataagcaaaaataggttaacataaaattaatgtatttagtacaaattttatactaaatacattaa 55624388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 5986910 - 5986972
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||| ||||| |||||||||||    |||||||||| |||||||| ||||||||||||||    
T  5986910 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 5986972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 24704404 - 24704466
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||| ||||| |||||||||||    |||||||||| | |||||||||||||||||||||    
T  24704404 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacc 24704466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 38940742 - 38940776
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaat 182  Q
    ||||||||||||||||| |||||||||||||||||    
T  38940742 atatactccctccgtcctaaaatataagcaaaaat 38940776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 40391247 - 40391305
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggt 209  Q
    |||||| || ||||||||||||||| |||||| | ||||| ||| ||||||||||||||    
T  40391247 tactccttctgtcccaaaatataagtaaaaatcgatcaacaaaaattaatgtatttggt 40391305  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 44124351 - 44124261
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttg 240  Q
    ||||||| ||||||  ||||| |||| || ||||||||||| |||||||||| |||||||  |||||||   ||||| | |||||||||||    
T  44124351 atactccatccgtcataaaatgtaagtaataattggtcaacaaaagttaatgcatttggtttaaattttcgtccaaaaatattaacttttg 44124261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 2229135 - 2229168
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  2229135 atatactccctccgtcccataatataagcaaaaa 2229168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 3043414 - 3043381
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  3043414 atatactccctccgtcctaaaatataagcaaaaa 3043381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 3249695 - 3249756
Alignment:
Q  170 tataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    |||||| ||||||||||| || |||||||||||||||||| |||| |||  |||| ||||||    
T  3249695 tataagtaaaaattggtcgacaaaagttaatgtatttggttcaaaatttataccagatacat 3249756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 5496884 - 5496925
Alignment:
Q  193 aagttaatgtatttggtacaaatttttaaccaaatacattaa 234  Q
    ||||| || ||||||||||||||||| |||||||||||||||    
T  5496884 aagttgatttatttggtacaaattttgaaccaaatacattaa 5496925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 5534383 - 5534440
Alignment:
Q  90 ttcttgttttggatgtttaacc-aatgcct-tggagacactgtttagcattccccaaa 145  Q
    ||||||||||||||| |||||| ||||||| ||||| ||||||||| |||||||||||    
T  5534383 ttcttgttttggatgcttaaccaaatgcctctggaggcactgtttaacattccccaaa 5534440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 12002929 - 12002896
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||||||||| ||||||||||    
T  12002929 atatactccctccgtcccaaaatgtaagcaaaaa 12002896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 25048109 - 25048182
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttt 238  Q
    ||||||||||||||||||  || || ||||  |  ||||||||||||||| ||| |||||||||||| ||||||    
T  25048109 caaaatataagcaaaaatgagtaaaagaaaagtggtgtatttggtacaaaatttgaaccaaatacatcaacttt 25048182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 25855118 - 25855179
Alignment:
Q  185 gtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||| |||||||||||||||||    |||||||||||||||||||  |||||||| ||||    
T  25855118 gtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatcgacttttgtagacc 25855179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 41615748 - 41615789
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaa 263  Q
    ||||||||||||||||||||||||||| || | |||||||||    
T  41615748 ccaaatacattaacttttgttgacctaattttctcttataaa 41615789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 47833669 - 47833604
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagtatttt 287  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||| ||||| ||||||    
T  47833669 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 47833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 52712936 - 52712969
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaa 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  52712936 atatactccctccgtcctaaaatataagcaaaaa 52712969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 7695280 - 7695244
Alignment:
Q  144 aaacatatactccctccgtcccaaaatataagcaaaa 180  Q
    |||||||||||||||||||  ||||||||||||||||    
T  7695280 aaacatatactccctccgtttcaaaatataagcaaaa 7695244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 8258059 - 8258027
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaat 182  Q
    ||||||||||||||||||||||||| |||||||    
T  8258059 atactccctccgtcccaaaatataaacaaaaat 8258027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 8271477 - 8271445
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaat 182  Q
    ||||||||||||||||||||||||| |||||||    
T  8271477 atactccctccgtcccaaaatataaacaaaaat 8271445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 10048597 - 10048514
Alignment:
Q  186 tcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagacc 270  Q
    ||||| |||||| |||||||||||  | ||  | ||||||||||||||| ||| ||||||| | |||| ||||||||||||||||    
T  10048597 tcaacaaaagttgatgtatttggtctatatcctgaaccaaatacattaattttagttgacc-aattgtctcttataaaaaagacc 10048514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 19147171 - 19147219
Alignment:
Q  21 ttctgtcttggaaatataaagtgttacttttgagcaaataataattaca 69  Q
    |||||||||| ||||||||| ||| |||||| | |||||||||||||||    
T  19147171 ttctgtcttgaaaatataaactgtcactttttatcaaataataattaca 19147219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 39078016 - 39078048
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||| ||||||||||||||    
T  39078016 tatactccctccgtcccacaatataagcaaaaa 39078048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 42797766 - 42797830
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccta 248  Q
    ||||||| ||||| |||||||||||    |||||||||| | |||||| ||||||||||||||||    
T  42797766 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccta 42797830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 51545533 - 51545501
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaa 180  Q
    ||||||||||||||| |||||||||||||||||    
T  51545533 atatactccctccgttccaaaatataagcaaaa 51545501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 11114349 - 11114262
Alignment:
Q  157 ctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||||||||||||| |||||||| |||||  ||||| |||||||||||| ||||||| |||  |||||||||| |||||||||    
T  11114349 ctccgtcccaaaatataagtaaaaattgatcaacataagttgatgtatttggtataaattttaaactgaatacattaatttttgttga 11114262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 35901039 - 35901126
Alignment:
Q  164 ccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    |||||||||||||||||||  ||||||  ||||| ||||| || ||||||||||| | || |||||||||||||||||||||||||||    
T  35901039 ccaaaatataagcaaaaatgagtcaacataagttgatgtaattagtacaaattttgagcccaatacattaacttttgttgacctattt 35901126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 29111069 - 29110979
Alignment:
Q  160 cgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatt 250  Q
    |||| |||||||||| ||||||||| ||||||||| |||||||||||||| |||| |||  |||||||||||| | || | ||||||||||    
T  29111069 cgtctcaaaatataaacaaaaattgatcaacgaaacttaatgtatttggttcaaaatttataccaaatacattcatttatattgacctatt 29110979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 33557781 - 33557859
Alignment:
Q  166 aaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||| |||||||||| || |||||  ||||| ||||||||| |||||||||| ||| |||||||||||||||| ||||    
T  33557781 aaaatgtaagcaaaaaatgatcaacataagtttatgtatttgatacaaattttgaactaaatacattaacttttattga 33557859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 179 - 281
Target Start/End: Original strand, 39753279 - 39753381
Alignment:
Q  179 aaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatag 278  Q
    |||| ||||||| |||||| ||||||||||| || | | | |||||||||||| |||||| | |||| ||||||| ||||||||||  ||||||||| ||    
T  39753279 aaatgggtcaactaaagttgatgtatttggttcataatgtaaaccaaatacatcaactttagatgacttatttgtctcttataaaatggaccggagagag 39753378  T
Q  279 tag 281  Q
    |||    
T  39753379 tag 39753381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 13210050 - 13209990
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||||  ||||| |||||| || |||||||||| |||||||||||||||||||||||||    
T  13210050 ggtcaacataagttgatgtatctgatacaaattttgaaccaaatacattaacttttgttga 13209990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 8777760 - 8777851
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    |||||| ||||||  ||||||||| ||||||||| ||||| ||||||||| |||||||| |||| |||  |  |||||||||||||| ||||    
T  8777760 tactccttccgtcttaaaatataaacaaaaattgatcaacaaaagttaatatatttggttcaaaatttatattaaatacattaacttatgtt 8777851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 35901147 - 35901100
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatt 205  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  35901147 tccgtcctaaaatataagcaaaaataggtcaacaaaagttaatgtatt 35901100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 29110949 - 29111043
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||| |||||||  ||||| ||||||| ||| ||||||   || | ||||||||||||| ||||||| ||||||||||||||| ||| |||||    
T  29110949 atactctctccgtcgtaaaatgtaagcaataataggtcaatataaatgaatgtatttggtataaattttgaaccaaatacattaagtttcgttga 29111043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 29797938 - 29798034
Alignment:
Q  158 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaac---caaatacattaacttttgttgacctattt 251  Q
    ||||| ||||||| |||||||||||  || |||  || || |||||||||||||||||||| |||   |||||||||||| ||||||||||| ||||    
T  29797938 tccgttccaaaatgtaagcaaaaatgagttaacataaatttatgtatttggtacaaattttgaaccaacaaatacattaatttttgttgaccaattt 29798034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 13209977 - 13210050
Alignment:
Q  173 aagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    |||||||||||| ||||| |||||||||||||||||| |||| |||  | || |||||| ||||| ||||||||    
T  13209977 aagcaaaaattgatcaacaaaagttaatgtatttggttcaaaatttgtatcagatacatcaacttatgttgacc 13210050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 7974894 - 7974850
Alignment:
Q  162 tcccaaaatataagcaaaaattggtcaacgaaagttaatgtattt 206  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||    
T  7974894 tcccaaaatataaacaaaaattggtcaataaaagttaatgtattt 7974850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 7974778 - 7974877
Alignment:
Q  152 actccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||||| ||| |||||||||  || ||| |||||||  || || | |||||||||||||||||| |   |||||||||||||||| |||||| ||||    
T  7974778 actccctccttccaaaaatataaaaaagaatgggtcaacataaattgacgtatttggtacaaattttgacaaaaatacattaacttttattgaccaattt 7974877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 8777846 - 8777795
Alignment:
Q  193 aagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||||||||  || ||||||| ||||||||| |||||||||||||||    
T  8777846 aagttaatgtatttaatataaattttgaaccaaatatattaacttttgttga 8777795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 29818282 - 29818337
Alignment:
Q  154 tccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggt 209  Q
    ||||||||| ||||| |||| |||||||| |||||| ||||||| |||||||||||    
T  29818282 tccctccgttccaaattataggcaaaaatgggtcaaagaaagttgatgtatttggt 29818337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 9548040 - 9548133
Alignment:
Q  150 atactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||||| || |||||||||||  ||| ||||||  ||||||  ||||| |||||||| ||||||||||| ||||||||| | ||| |||||||||    
T  9548040 atactctcttcgtcccaaaatgcaag-aaaaatgagtcaacataagttgatgtatttagtacaaattttgaaccaaatataataatttttgttga 9548133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 12763726 - 12763784
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagta 280  Q
    ||||||||||| |||||||||||||||  | | ||||||||| |||||||||| |||||    
T  12763726 ccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 25601096 - 25601034
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||| ||||| |||||||||||    |||||||||| | |||||||||||||||||||||    
T  25601096 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacc 25601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 41086658 - 41086624
Alignment:
Q  147 catatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||||||| ||||||||||||||    
T  41086658 catatactccctccgtcccacaatataagcaaaaa 41086624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 15114737 - 15114636
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacga-aagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctat 249  Q
    |||||||||| ||| ||||| |||| |||||||| ||||  | || || | |||||| | ||||||||| || |||||||||||| ||||||||||| ||    
T  15114737 tactccctccatccaaaaatgtaagaaaaaattgatcaaacataaattgacgtatttagaacaaattttgaatcaaatacattaatttttgttgaccaat 15114638  T
Q  250 tt 251  Q
    ||    
T  15114637 tt 15114636  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 15583430 - 15583471
Alignment:
Q  26 tcttggaaatataaagtgttacttttgagcaaataataatta 67  Q
    |||||||||||||| ||||| ||||||| |||||||||||||    
T  15583430 tcttggaaatataatgtgttgcttttgaccaaataataatta 15583471  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 21485005 - 21485050
Alignment:
Q  220 aaccaaatacattaacttttgttgacctatttgtttcttataaaaa 265  Q
    |||||||||||| || ||| ||||||| ||||||||||||||||||    
T  21485005 aaccaaatacatcaattttggttgaccaatttgtttcttataaaaa 21485050  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 23725710 - 23725763
Alignment:
Q  84 aaaactttcttgttttggatgtttaaccaatgccttggagacactgtttagcat 137  Q
    ||||||| ||||||||||||| |||||||||||| ||| | ||||| |||||||    
T  23725710 aaaacttacttgttttggatgcttaaccaatgccctgggggcactggttagcat 23725763  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 39753338 - 39753265
Alignment:
Q  192 aaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaa 265  Q
    |||||| |||||||||||  | ||| | |||||||||||| |||||| ||||||| |||||| | |||||||||    
T  39753338 aaagttgatgtatttggtttacattatgaaccaaatacatcaactttagttgacccatttgtctattataaaaa 39753265  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 54684 - 54748
Alignment:
Q  222 ccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagtattt 286  Q
    ||||||||||| |||||||||||||||  | | ||||||||| | |||||||| ||||| |||||    
T  54684 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 54748  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 284
Target Start/End: Complemental strand, 3304374 - 3304274
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacctatttgtttcttataaaaaagaccggagatagtagta 283  Q
    ||||||| ||||| |||||||||||    |||||||||| | |||||| |||||||||||||| |    ||||||||||| | ||||||||  |||||||    
T  3304374 ggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtagta 3304275  T
Q  284 t 284  Q
    |    
T  3304274 t 3304274  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 8637334 - 8637254
Alignment:
Q  165 caaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||||||| |  ||||| |||| || ||||||||||  |||||||| ||||||||| || || |||| |||||    
T  8637334 caaaatataagcaaaattgagtcaaagaaaattgatgtatttggaccaaattttgaaccaaatatatcaattttttttgac 8637254  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 10076520 - 10076460
Alignment:
Q  167 aaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaat 227  Q
    ||||||||| ||||||||||||  ||||||| |||||| |||| |||| ||| ||||||||    
T  10076520 aaatataaggaaaaattggtcagagaaagttgatgtatatggtccaaaatttgaaccaaat 10076460  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 11992607 - 11992639
Alignment:
Q  149 tatactccctccgtcccaaaatataagcaaaaa 181  Q
    |||||||||||||||| ||||||||||||||||    
T  11992607 tatactccctccgtcctaaaatataagcaaaaa 11992639  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 33557897 - 33557801
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    |||| |||| || |||| |||| ||||| |||||||| ||||  ||||||||||||||| || |||| |||  | ||||||||| ||||| ||||||    
T  33557897 atatgctccatctgtcctaaaacataagtaaaaattgatcaataaaagttaatgtatttagttcaaaatttgtatcaaatacataaacttatgttga 33557801  T

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Target: scaffold0650 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 84 - 20
Alignment:
Q  181 attggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||| |||||| ||||||||||   |||||||||||||||||||| |||||||||||||    
T  84 attggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgac 20  T

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Target: scaffold0097 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 37982 - 37936
Alignment:
Q  199 atgtatttggtacaaatttttaaccaaatacattaacttttgttgac 245  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  37982 atgtatttggtataaattttaaaccaaatacattaacttttgttgac 37936  T

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Target: scaffold0097; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 37901 - 37982
Alignment:
Q  151 tactccctccgtcccaaaatata-agcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacat 231  Q
    ||||||||| |||| |||||||| |  ||||||| |||||| ||||||||||||||||||  ||| |||  |||||||||||    
T  37901 tactccctctgtcctaaaatatagataaaaaattagtcaacaaaagttaatgtatttggtttaaaatttataccaaatacat 37982  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 95039 - 94972
Alignment:
Q  177 aaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||||||||||||  ||||| |||||||||||||||||||| |||  |||||||||| |||| ||||    
T  95039 aaaaattggtcaacataagttgatgtatttggtacaaattttgaacataatacattaatttttattga 94972  T

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Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 13251 - 13200
Alignment:
Q  193 aagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttga 244  Q
    ||||| |||||| | ||||||||||| |||||||||||||||||||||||||    
T  13251 aagttgatgtatcttgtacaaattttaaaccaaatacattaacttttgttga 13200  T

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Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 13165 - 13223
Alignment:
Q  151 tactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggt 209  Q
    |||||||||| | ||||||| ||||||||||| | ||||| ||||||||||||||||||    
T  13165 tactccctccattccaaaatgtaagcaaaaatggatcaacaaaagttaatgtatttggt 13223  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 28234 - 28195
Alignment:
Q  203 atttggtacaaatttttaaccaaatacattaacttttgtt 242  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  28234 atttggtacgaattttgaaccaaatacattaacttttgtt 28195  T

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Target: scaffold0126; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 28156 - 28221
Alignment:
Q  148 atatactccctccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaa 214  Q
    ||||||| ||||||||| |||||||||  |||||||| | ||| |||||||||||||||||| ||||    
T  28156 atatacttcctccgtcc-aaaatataaataaaaattgattaacaaaagttaatgtatttggttcaaa 28221  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 51225 - 51300
Alignment:
Q  164 ccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaactttt 239  Q
    ||||||| |||||||||  | ||||||  ||||| |||||||||||| ||||||| ||| ||||||||||| ||||    
T  51225 ccaaaatttaagcaaaagattgtcaacataagttgatgtatttggtataaattttgaactaaatacattaattttt 51300  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 49539 - 49601
Alignment:
Q  184 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 246  Q
    ||||||| ||||| |||||||||||    |||||||||| |||||||| ||||||||||||||    
T  49539 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 49601  T

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Target: scaffold1005 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1005
Description:

Target: scaffold1005; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 1214 - 1181
Alignment:
Q  218 ttaaccaaatacattaacttttgttgacctattt 251  Q
    ||||||| ||||||||||||||||||||||||||    
T  1214 ttaaccagatacattaacttttgttgacctattt 1181  T

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