View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1956_low_21 (Length: 246)
Name: NF1956_low_21
Description: NF1956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1956_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11777519 - 11777647
Alignment:
| Q |
1 |
attcaaactccatatagccaggttttaacaatggacatgacgagtagaccatctgaaatcctattccaaagttaatatgtatattatctatttaacaatg |
100 |
Q |
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| T |
11777519 |
attcaaactccatatagccaggttttaacaatggacatgacgagtagagcatctgaaatcctattccaaagttaatatgtatagtatctatttaaccatg |
11777618 |
T |
|
| Q |
101 |
gactaaatacaatttttcaaacatatatt |
129 |
Q |
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| T |
11777619 |
gactaaatacaatttttcaaacatatatt |
11777647 |
T |
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