View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1956_low_24 (Length: 240)
Name: NF1956_low_24
Description: NF1956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1956_low_24 |
 |  |
|
| [»] scaffold1171 (2 HSPs) |
 |  |  |
|
| [»] scaffold0250 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 38154157 - 38154073
Alignment:
| Q |
139 |
tagaaagcacgtgaactaatacttttctagtcttcaaagtgcacaacaaggcaatgttactagtatgtttaaacatgatctgttt |
223 |
Q |
| |
|
||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38154157 |
tagaaagcacgtgaagtaatacttttcaagccttcaaagtgcacaacaaggcaatgttactagtatgtttaaacatgatctgttt |
38154073 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 41788111 - 41788027
Alignment:
| Q |
139 |
tagaaagcacgtgaactaatacttttctagtcttcaaagtgcacaacaaggcaatgttactagtatgtttaaacatgatctgttt |
223 |
Q |
| |
|
||||||||||| |||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
41788111 |
tagaaagcacgcgaactaatgcttttcaagccttcaaagtgcacaacaaggcaatgttactagtatgtttaaacatggtctgttt |
41788027 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38154290 - 38154228
Alignment:
| Q |
1 |
acttggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattattatta |
63 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
38154290 |
acttggtcgttgctgatgtggcccccacatcctattagtgaaatgccacatgtattattatta |
38154228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41788250 - 41788188
Alignment:
| Q |
1 |
acttggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattattatta |
63 |
Q |
| |
|
||||||||||||||||||||| || ||||||| |||||||| ||||||| ||||||||||||| |
|
|
| T |
41788250 |
acttggtcgttgctgacgtggcactcacatcccattagtgaggtgccacgtgtattattatta |
41788188 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41787177 - 41787235
Alignment:
| Q |
1 |
acttggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattatt |
59 |
Q |
| |
|
||||||||||||||||||||| |||||||| | |||||||| ||||||| ||||||||| |
|
|
| T |
41787177 |
acttggtcgttgctgacgtggcacccacattccattagtgaggtgccacgtgtattatt |
41787235 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 19693149 - 19693198
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| ||||||| |||||| |
|
|
| T |
19693149 |
tcgttgctgacgtggcacccacatcccattagtgaggtgccacgtgtatt |
19693198 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 19703734 - 19703783
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| ||||||| |||||| |
|
|
| T |
19703734 |
tcgttgctgacgtggcacccacatcccattagtgaggtgccacgtgtatt |
19703783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 38154212 - 38154179
Alignment:
| Q |
80 |
aattcatcctgttatttttaaattgaaataaatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
38154212 |
aattcatcctgttatttttaaattgaaataaatt |
38154179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 3066709 - 3066657
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |||||| |
|
|
| T |
3066709 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccacgtgtatt |
3066657 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 13099093 - 13099009
Alignment:
| Q |
139 |
tagaaagcacgtgaactaatacttttctagtcttcaaagtgcacaacaaggcaatgttactagtatgtttaaacatgatctgttt |
223 |
Q |
| |
|
|||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13099093 |
tagaaagcacgtgaactaatgcttttcaagccttcaaagtgcacaacaaggcaatgttactagtatgtttaaacatgatctgttt |
13099009 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13110565 - 13110623
Alignment:
| Q |
1 |
acttggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattatt |
59 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
13110565 |
acttggtcgttgctgacgtggcacccacatcccattagtgaggtgccacatgtattatt |
13110623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 25820732 - 25820680
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattatt |
59 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
25820732 |
tcgttgctgacgtggcacccacatcccattagtgaagtgccacgtgtattatt |
25820680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13099226 - 13099171
Alignment:
| Q |
1 |
acttggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||||| ||||||| |||||| |
|
|
| T |
13099226 |
acttggtcgttgctgacgtggcacccacatcccattagtgaggtgccacgtgtatt |
13099171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 20596043 - 20595990
Alignment:
| Q |
6 |
gtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattatt |
59 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
20596043 |
gtcgttgctgacgtggcacccacatcccattagtgaggtgccacgtgtattatt |
20595990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 20595970 - 20595937
Alignment:
| Q |
80 |
aattcatcctgttatttttaaattgaaataaatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
20595970 |
aattcatcctgttatttttaaattgaaaaaaatt |
20595937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 25820244 - 25820292
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| ||||||| |||||| |
|
|
| T |
25820244 |
tcgttgctgacgtggcacccacatcc-attagtgaggtgccacgtgtatt |
25820292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13098159 - 13098199
Alignment:
| Q |
1 |
acttggtcgttgctgacgtggaacccacatccgattagtga |
41 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
13098159 |
acttggtcgttgctgacgtggcacccacatctcattagtga |
13098199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 62; Significance: 6e-27; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 12736844 - 12736771
Alignment:
| Q |
150 |
tgaactaatacttttctagtcttcaaagtgcacaacaaggcaatgttactagtatgtttaaacatgatctgttt |
223 |
Q |
| |
|
||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12736844 |
tgaactaatgcttttcaagccttcaaagtgcacaacaaggcaatgttactagtatgtttaaacatgatctgttt |
12736771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 7538448 - 7538393
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattattatt |
62 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||| |
|
|
| T |
7538448 |
tcgttgctgacgtggcacccacatcctattagtgaggtgccacgtgtattattatt |
7538393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 7537547 - 7537596
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| ||||||| |||||| |
|
|
| T |
7537547 |
tcgttgctgacgtggcacccacatcccattagtgaggtgccacgtgtatt |
7537596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 17102491 - 17102446
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccac |
49 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |
|
|
| T |
17102491 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccac |
17102446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 35409846 - 35409902
Alignment:
| Q |
6 |
gtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattattatt |
62 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||| |
|
|
| T |
35409846 |
gtcgttgctgacgtggcacccacatcccattagtgaggtgccacgtgtattattatt |
35409902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 31190775 - 31190830
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattattatt |
62 |
Q |
| |
|
||||||||||||||| |||||||| | |||||||| ||||||| |||||||||||| |
|
|
| T |
31190775 |
tcgttgctgacgtggcacccacattccattagtgacgtgccacgtgtattattatt |
31190830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 3340197 - 3340249
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |||||| |
|
|
| T |
3340197 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccacgtgtatt |
3340249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 3345556 - 3345504
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |||||| |
|
|
| T |
3345556 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccacgtgtatt |
3345504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 35410846 - 35410790
Alignment:
| Q |
6 |
gtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattattatt |
62 |
Q |
| |
|
|||||||||||||||| |||||||| | |||||||| ||| ||| |||||||||||| |
|
|
| T |
35410846 |
gtcgttgctgacgtggcacccacatgccattagtgaggtgtcacgtgtattattatt |
35410790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 43658363 - 43658318
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccac |
49 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |
|
|
| T |
43658363 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccac |
43658318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 11961999 - 11962054
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattattatt |
62 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||| |
|
|
| T |
11961999 |
tcgttgctgacgtggcacccacatcctattagtgaggtgccacgtgtattattatt |
11962054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 54718030 - 54717978
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |||||| |
|
|
| T |
54718030 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccacgtgtatt |
54717978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 11962904 - 11962855
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
||||||||||||||| ||||| |||| |||||||| ||||||| |||||| |
|
|
| T |
11962904 |
tcgttgctgacgtggcacccatatcccattagtgaggtgccacgtgtatt |
11962855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1171 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold1171
Description:
Target: scaffold1171; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 954 - 1004
Alignment:
| Q |
9 |
gttgctgacgtggaacccacatccgattagtgaagtgccacatgtattatt |
59 |
Q |
| |
|
||||| ||||||| |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
954 |
gttgcggacgtggcacccacatcccattagtgaggtgccacatgtattatt |
1004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1171; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 1022 - 1055
Alignment:
| Q |
80 |
aattcatcctgttatttttaaattgaaataaatt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
1022 |
aattcatcctgttatttttaaattgaaaaaaatt |
1055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 21004303 - 21004254
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| ||||||| |||||| |
|
|
| T |
21004303 |
tcgttgctgacgtggcacccacatcccattagtgaggtgccacgtgtatt |
21004254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 21003502 - 21003554
Alignment:
| Q |
7 |
tcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtattatt |
59 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
21003502 |
tcgttgctgacgtgacacccacatcccattagtgaggtgccacgtgtattatt |
21003554 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 28932080 - 28932132
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |||||| |
|
|
| T |
28932080 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccacgtgtatt |
28932132 |
T |
 |
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Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30085752 - 30085804
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccacatgtatt |
56 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |||||| |
|
|
| T |
30085752 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccacgtgtatt |
30085804 |
T |
 |
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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 10715969 - 10716014
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccac |
49 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |
|
|
| T |
10715969 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccac |
10716014 |
T |
 |
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Target: scaffold0250 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0250
Description:
Target: scaffold0250; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 21969 - 22014
Alignment:
| Q |
4 |
tggtcgttgctgacgtggaacccacatccgattagtgaagtgccac |
49 |
Q |
| |
|
|||||||||||||||||| || ||||||| |||||||| ||||||| |
|
|
| T |
21969 |
tggtcgttgctgacgtggcactcacatcccattagtgaggtgccac |
22014 |
T |
 |
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