View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1956_low_7 (Length: 423)
Name: NF1956_low_7
Description: NF1956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1956_low_7 |
 | |
|
| [»] chr7 (2 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14211112 - 14210858
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211112 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14211013 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211012 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14210913 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210912 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14210858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14213032 - 14212778
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14213032 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14212933 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212932 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14212833 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212832 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14212778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14214000 - 14213746
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214000 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14213901 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
14213900 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14213801 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14213800 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14213746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14214969 - 14214715
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214969 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14214870 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214869 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14214770 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14214769 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14214715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14215938 - 14215684
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215938 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14215839 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215838 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14215739 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14215738 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14215684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14218810 - 14218556
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218810 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14218711 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218710 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14218611 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14218610 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14218556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14219779 - 14219525
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219779 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14219680 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219679 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14219580 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219579 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14219525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14221699 - 14221445
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14221699 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14221600 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14221599 |
gcttcctaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14221500 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14221499 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14221445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14222668 - 14222414
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222668 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14222569 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222568 |
gcttcctaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
14222469 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14222468 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14222414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14209192 - 14208956
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209192 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14209093 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209092 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtt------------------tgacatgacatgagagataaatttatttgtgaaattg |
14209011 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209010 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14208956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14210143 - 14209907
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210143 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14210044 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14210043 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtt------------------tgacatgacatgagagataaatttatttgtgaaattg |
14209962 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14209961 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14209907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14212063 - 14211827
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14212063 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14211964 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211963 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtt------------------tgacatgacatgagagataaatttatttgtgaaattg |
14211882 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14211881 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14211827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14216889 - 14216653
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216889 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14216790 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216789 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtt------------------tgacatgacatgagagataaatttatttgtgaaattg |
14216708 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14216707 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14216653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14217840 - 14217604
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217840 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14217741 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217740 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtt------------------tgacatgacatgagagataaatttatttgtgaaattg |
14217659 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14217658 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14217604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 14220730 - 14220494
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220730 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
14220631 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220630 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtt------------------tgacatgacatgagagataaatttatttgtgaaattg |
14220549 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14220548 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
14220494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 14235243 - 14235117
Alignment:
| Q |
146 |
tcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattgtctccactctttttacattcttcaatga |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14235243 |
tcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattgtctccactctttttacattcttcaatga |
14235144 |
T |
|
| Q |
246 |
actctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||| ||||||||||||||| |
|
|
| T |
14235143 |
actctttaacaggttacttgccaatta |
14235117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 31409428 - 31409174
Alignment:
| Q |
18 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31409428 |
gattctaaccatgaaagaagcaagtatgagtaatagtgagtgtagcagtatgtttcaatcacatttaagtaggtttactttatatttataactctgtcat |
31409329 |
T |
|
| Q |
118 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31409328 |
gcttccaaaacattttaaattttacttttcatcattcaaattgtttgaagtctatagtctatctgacatgacatgagagataaatttatttgtgaaattg |
31409229 |
T |
|
| Q |
218 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31409228 |
tctccactctttttacattcttcaatgaactctttaacaagttacttgccaatta |
31409174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 32280598 - 32280638
Alignment:
| Q |
212 |
aaattgtctccactctttttacattcttcaatgaactcttt |
252 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
32280598 |
aaattgtctccactccttttacattcttcaatgaattcttt |
32280638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 423
Target Start/End: Complemental strand, 40782729 - 40782696
Alignment:
| Q |
390 |
ccttgagccagtttgagttgattgatgatgatga |
423 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
40782729 |
ccttgagccagtttgagttgattgatgatgatga |
40782696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 27964694 - 27964654
Alignment:
| Q |
212 |
aaattgtctccactctttttacattcttcaatgaactcttt |
252 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||| ||||| |
|
|
| T |
27964694 |
aaattgtctccactccttttacattcttgaatgaattcttt |
27964654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 14836995 - 14837035
Alignment:
| Q |
212 |
aaattgtctccactctttttacattcttcaatgaactcttt |
252 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
14836995 |
aaattgtctccactccttttacattcttcaatgaattcttt |
14837035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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