View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19570_high_16 (Length: 272)
Name: NF19570_high_16
Description: NF19570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19570_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 46910381 - 46910128
Alignment:
| Q |
1 |
tttacttattttttccttttatagttcaaacaatgtgttgtgttatgtgaatttagacatctataaaacctgccgagaaccagctgaaagaatgaagaaa |
100 |
Q |
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| T |
46910381 |
tttacttattttttccttttatagttcaaacaatgtgttgtgttatgtgaatttagacatctataaaacctgccgagaaccagctaaaagattgaagaaa |
46910282 |
T |
|
| Q |
101 |
cattaaatttaactgtttgactgaaaacactgaaagataaagtggaaaatgagtcgtctaaattattgagaacacacaaaatttccttttgaaattcgtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46910281 |
cattaaatttaactgtttgactgaaaacactgaaagataaagtggaaaatgagtcgtctaaattattgagaacacacaaaatttccttttgaaattcgtc |
46910182 |
T |
|
| Q |
201 |
ccgtccatcgtttcaaatttgactcaatagtgtatgcagtatgcatgcactcat |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46910181 |
ccgtccatcgtttcaaatttgactcaatagtgtatgcagtatgcatgcactcat |
46910128 |
T |
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