View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19570_low_21 (Length: 245)
Name: NF19570_low_21
Description: NF19570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19570_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 9903188 - 9903407
Alignment:
| Q |
10 |
attatacttgatgagttgagatatcccttttagtcatatcagtgaaaacctttggagaataaagaagtggctttgtgaatctagtgttataacgtgacct |
109 |
Q |
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| T |
9903188 |
attataattgatgagttgagatatcccttttagtcatatcagtgaaaacctttggagaataaagaagtggctttgtgaatctagtgttataacgtgacct |
9903287 |
T |
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| Q |
110 |
atggtgtgctgccaaacattgtcaaatgccttctaggattgaattagatcactttaagaatggtcttaagagggaatcttacttgggatgaaatactttc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9903288 |
atggtgtgctgccaaacattgtcaaatgccttctaggattgaattagatcactttaagaatggtcttaagagggaatcttacttgggatgaaatactttc |
9903387 |
T |
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| Q |
210 |
cttttattctagttttaagt |
229 |
Q |
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|||||||||||||||||||| |
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| T |
9903388 |
cttttattctagttttaagt |
9903407 |
T |
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