View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19572_low_1 (Length: 512)
Name: NF19572_low_1
Description: NF19572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19572_low_1 |
 |  |
|
| [»] scaffold0245 (1 HSPs) |
 |  |  |
|
| [»] scaffold0118 (2 HSPs) |
 |  |  |
|
| [»] scaffold0181 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0245 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0245
Description:
Target: scaffold0245; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 12589 - 12435
Alignment:
| Q |
45 |
gtgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaaca |
144 |
Q |
| |
|
|||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||||| | | |||||||||| ||||||||||||||| |
|
|
| T |
12589 |
gtgttgtaaatagtgaagttttactattacttttagtaatttgtaattggcccattagtcattagtcaggcccattaggttagagtagcctatataaaca |
12490 |
T |
 |
| Q |
145 |
cattagtggttatacattatttatctctaaaatatagtatattcagttttcacac |
199 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
12489 |
cattagtggttgtacattatttatctctgaaatataatatattcaattttcacac |
12435 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 50061270 - 50061432
Alignment:
| Q |
23 |
tcattcaccagcttgaggggaagtgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattag |
122 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||||| ||||||||| ||||||||||||| | | |||||| |
|
|
| T |
50061270 |
tcattcaccagcttgagggggagtgttgtaaatagtgaagttttactattatcagtagtaatttataattggcctattagtcattagtcaggcccattag |
50061369 |
T |
 |
| Q |
123 |
gttaagatagcctatataaacacattagtggttatacattatttatctctaaaatatagtata |
185 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||| |
|
|
| T |
50061370 |
gttagaatagcctatataaacacattagtcgttctacattatttatctctgaaatataatata |
50061432 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 50056804 - 50056954
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaacac |
145 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||||||||||||||||||| ||||| ||||||| | | |||||||||| ||||||||||||||||| |
|
|
| T |
50056804 |
tgttgtaaatagtgaagttttactattatcagtagtaatttgtaattggcctattagttattagtcaggcccattaggttagaatagcctatataaacac |
50056903 |
T |
 |
| Q |
146 |
attagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
50056904 |
attagtggttgtacattatttatctctgaaatata--atattcagttttcaca |
50056954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 180
Target Start/End: Complemental strand, 28096098 - 28095993
Alignment:
| Q |
76 |
attagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaacacattagtggttatacatta-tttatctctaa |
174 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| | | |||||||||| ||||| ||||||||||||||||||||| || |||| ||||||||| | |
|
|
| T |
28096098 |
attagtaatttgtaattatcccattagtcattagtcaggcccattaggttagaatagcttatataaacacattagtggttgtaaattattttatctctga |
28095999 |
T |
 |
| Q |
175 |
aatata |
180 |
Q |
| |
|
|||||| |
|
|
| T |
28095998 |
aatata |
28095993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 27470581 - 27470613
Alignment:
| Q |
24 |
cattcaccagcttgaggggaagtgttgtaaata |
56 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
27470581 |
cattcatcagcttgaggggaagtgttgtaaata |
27470613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 1286322 - 1286168
Alignment:
| Q |
45 |
gtgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaaca |
144 |
Q |
| |
|
|||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||||| | | |||||||||| ||||||||||||||| |
|
|
| T |
1286322 |
gtgttgtaaatagtgaagttttactattacttttagtaatttgtaattggcccattagtcattagtcaggcccattaggttagagtagcctatataaaca |
1286223 |
T |
 |
| Q |
145 |
cattagtggttatacattatttatctctaaaatatagtatattcagttttcacac |
199 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
1286222 |
cattagtggttgtacattatttatctctgaaatataatatattcaattttcacac |
1286168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 52986508 - 52986576
Alignment:
| Q |
25 |
attcaccagcttgaggggaagtgttgtaaatagtaaagttttactattattattagtaatttgtaattg |
93 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
52986508 |
attcactagcttgagggggagtgttgtaaatagtgaagttttacaattattattagtaatttgtaattg |
52986576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 27203594 - 27203531
Alignment:
| Q |
23 |
tcattcaccagcttgaggggaagtgttgtaaatagtaaagttttactattattattagtaattt |
86 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| | | ||||| ||||| || ||||||||| |
|
|
| T |
27203594 |
tcattcaccagcttgaggagaagtgttgtaaataatgtatttttattattagtagtagtaattt |
27203531 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 2410223 - 2410260
Alignment:
| Q |
130 |
tagcctatataaacacattagtggttatacattattta |
167 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||| |
|
|
| T |
2410223 |
tagcctatataaacacattagtggttgtaaattattta |
2410260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 91; Significance: 7e-44; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 38500130 - 38500283
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaacac |
145 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| | | |||||||||| ||||||||||||||||| |
|
|
| T |
38500130 |
tgttgtaaatagtgaagttttactattattattagtaatttgtaattggcctattagtcattagtcaggcccattaggttagaatagcctatataaacac |
38500229 |
T |
 |
| Q |
146 |
attagtggttatacattatttatc---tctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
|||||||||| ||||||||||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
38500230 |
attagtggttgtacattatttatctcgtctgaaatata--atattcagttttcaca |
38500283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 17508759 - 17508909
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaacac |
145 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | | |||||||| ||||||||||||||||| |
|
|
| T |
17508759 |
tgttgtaaatagtgaagttttactattattattagtaatttgtaattggcccattagtcattagtcaggcctattaggttcgaatagcctatataaacac |
17508858 |
T |
 |
| Q |
146 |
attagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
|||||||||| |||||||||||| ||| ||||||| ||||||| |||||||| |
|
|
| T |
17508859 |
attagtggttgtacattatttatttctgaaatata--atattcaattttcaca |
17508909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 198
Target Start/End: Complemental strand, 25476529 - 25476376
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttacta---ttattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaa |
142 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||||||||||||| ||||| || | |||| |||||||| | | ||||||||||| | |||| ||| ||| |
|
|
| T |
25476529 |
tgttgtgaatagtgaagttttactactattattattagtaatttctaattagctcattagccattagtcaggcccattaggttaaaacagcccatagaaa |
25476430 |
T |
 |
| Q |
143 |
cacattagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
||||||||||||| || ||||||||||| | ||||||| || ||||||||||||| |
|
|
| T |
25476429 |
cacattagtggttgtaaattatttatctttgaaatata--atcttcagttttcaca |
25476376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 7e-41; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 44420550 - 44420700
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaacac |
145 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| | | ||| |||||| ||||||||||||||||| |
|
|
| T |
44420550 |
tgttataaatagtgaagttttactattattattagtaatttgtaattggcccattagtcattggtcaggcccataaggttagaatagcctatataaacac |
44420649 |
T |
 |
| Q |
146 |
attagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
|||||||||| || || |||||||||| ||||||| |||||||||||||||| |
|
|
| T |
44420650 |
attagtggttgtatatcatttatctctgaaatata--atattcagttttcaca |
44420700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 16985812 - 16985658
Alignment:
| Q |
44 |
agtgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtc-ggactcattaggttaagatagcctatataaa |
142 |
Q |
| |
|
|||| |||||||| | | |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||| |||||| |
|
|
| T |
16985812 |
agtgctgtaaataatgatgttttactattattattaataatttgtaattggcccattagtcattagtcaggac-cattaggttagaatagcctttataaa |
16985714 |
T |
 |
| Q |
143 |
cac--attagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
||| |||||||||| |||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
16985713 |
cacatattagtggttgtacattatttatctctgaaatata--atattcagttttcaca |
16985658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 10711880 - 10712038
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggtta----ag---atagcctata |
138 |
Q |
| |
|
||||||||||||| || |||||| ||||||||||||||||||||||| |||| |||||||||||| | | |||||||||| || |||||||||| |
|
|
| T |
10711880 |
tgttgtaaatagtgaatttttacaattattattagtaatttgtaattagcccattagtcattagttaggcccattaggttagaatagcctatagcctata |
10711979 |
T |
 |
| Q |
139 |
taaacacattagtggttatacatta-tttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
|||| |||||||||| ||||||||| ||||||||| | ||||| |||||||||||||||| |
|
|
| T |
10711980 |
taaatacattagtggatatacattattttatctctgacatata--atattcagttttcaca |
10712038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 32749483 - 32749531
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttactattattattagtaatttgtaattgg |
94 |
Q |
| |
|
||||||||||| | || |||||||||||||||||||||||||||||||| |
|
|
| T |
32749483 |
tgttgtaaataatgaaattttactattattattagtaatttgtaattgg |
32749531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 30996898 - 30996930
Alignment:
| Q |
24 |
cattcaccagcttgaggggaagtgttgtaaata |
56 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |
|
|
| T |
30996898 |
cattcaccagcttgagaggaagtgttgtaaata |
30996930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0118
Description:
Target: scaffold0118; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 18756 - 18926
Alignment:
| Q |
24 |
cattcaccagcttgaggggaagtgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattagg |
123 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||||||| |||||| || || |||||||||| | | |||| || |
|
|
| T |
18756 |
cattcaccagcttgtgggggagtgttgtaaatattgaagttttactattattattagtaatttgcaattgggccatttgtcattagtcaggcccatttgg |
18855 |
T |
 |
| Q |
124 |
ttaagatagcctatataaacacattagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
18856 |
ttataatagtttatataaacacattagtggttgtacattattta--tctaaaatata--atattcagttttcaca |
18926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 18936 - 18995
Alignment:
| Q |
135 |
tatataaacacattagtggttatacattatttatctctaaaatatagtatattcagttttca |
196 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
18936 |
tatataaacacattaatggttgtacattatttatctctaaaatata--atatttagttttca |
18995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 11393060 - 11393210
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaacac |
145 |
Q |
| |
|
||||||||||| | |||||||| |||||||||||||||||||||||| | | ||||||||||||| | | |||||| ||| ||||||||||||||||| |
|
|
| T |
11393060 |
tgttgtaaataatgaagttttatgattattattagtaatttgtaattgtctcattagtcattagtcaggcccattagcttagaatagcctatataaacac |
11393159 |
T |
 |
| Q |
146 |
attagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
|| ||||||| |||||||||||||||| ||||||| ||||| |||||||||| |
|
|
| T |
11393160 |
atcagtggttgtacattatttatctctgaaatata--atattaagttttcaca |
11393210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 46 - 198
Target Start/End: Original strand, 11402787 - 11402937
Alignment:
| Q |
46 |
tgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatataaacac |
145 |
Q |
| |
|
||||||||||| | |||||||| |||||||||||||||||||||||| | | ||||||||||||| | | |||||| ||| ||||||||||||||||| |
|
|
| T |
11402787 |
tgttgtaaataatgaagttttatgattattattagtaatttgtaattgtctcattagtcattagtcaggcccattagcttagaatagcctatataaacac |
11402886 |
T |
 |
| Q |
146 |
attagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
|| ||||||| |||||||||||||||| ||||||| ||||| |||||||||| |
|
|
| T |
11402887 |
atcagtggttgtacattatttatctctgaaatata--atattaagttttcaca |
11402937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 40361167 - 40361087
Alignment:
| Q |
117 |
cattaggttaagatagcctatataaacacattagtggttatacattatttatctctaaaatatagtatattcagttttcacac |
199 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||| || ||||| | ||||||| || |||| ||||||||||||||||| |
|
|
| T |
40361167 |
cattaggttagaatagcctatataagcacattagtgattgtacatattatatctctgaagtata--atattcagttttcacac |
40361087 |
T |
 |
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Target: scaffold0181 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0181
Description:
Target: scaffold0181; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 177
Target Start/End: Original strand, 14385 - 14521
Alignment:
| Q |
43 |
aagtgttgtaaatagtaaagttttactatt---attattagtaatttgtaattggcccgttagtcattagtcggactcattaggttaagatagcctatat |
139 |
Q |
| |
|
|||||||| ||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||| ||| ||||||| || |||| ||| || |
|
|
| T |
14385 |
aagtgttggaaatagtgaagttttactattattattattagtaatttgtaataagccctttagtcattagttagac-cattaggctagaatagtctacat |
14483 |
T |
 |
| Q |
140 |
aaacacattagtggttatacattatttatctctaaaat |
177 |
Q |
| |
|
||| | |||||||||| |||||||||||| ||| |||| |
|
|
| T |
14484 |
aaaaatattagtggttgtacattatttatttctgaaat |
14521 |
T |
 |
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Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 29443697 - 29443615
Alignment:
| Q |
114 |
actcattaggttaagatagcctatataaacacattagtggttatacattatttatctctaaaatatagtatattcagttttcaca |
198 |
Q |
| |
|
||||||||||||| |||| |||||||||||||||||||||| || |||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
29443697 |
actcattaggttagaatagtctatataaacacattagtggttgtatattatttatcagtgaaatata--atattcagttttcaca |
29443615 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 39364531 - 39364466
Alignment:
| Q |
41 |
ggaagtgttgtaaatagtaaagttttactattattattagtaatttgtaattggcccgttagtcat |
106 |
Q |
| |
|
|||| ||||||||| | | ||||||||||||||||||||||||||| ||||||| || |||||||| |
|
|
| T |
39364531 |
ggaaatgttgtaaacaatgaagttttactattattattagtaatttctaattggtccattagtcat |
39364466 |
T |
 |
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Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 2738027 - 2737990
Alignment:
| Q |
130 |
tagcctatataaacacattagtggttatacattattta |
167 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||| |
|
|
| T |
2738027 |
tagcctatataaacacattagtggttgtaaattattta |
2737990 |
T |
 |
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