View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19572_low_10 (Length: 227)
Name: NF19572_low_10
Description: NF19572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19572_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 46820661 - 46820441
Alignment:
| Q |
7 |
cctttctcgtgtttgtcctttcaataaagtatcaaaaatttgatgttcatgagaacacaaaaccatcttggtttgaagttatagcacaagattttaaaag |
106 |
Q |
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| T |
46820661 |
cctttctcgtgtttgtcctttcaataaagtatcaaaaatttgatgttcatgagaacacaaaaccatcttggtttgaagttatagcacaagattttaaaag |
46820562 |
T |
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| Q |
107 |
caaaacaaagatcaagataggtcttgttgacatcaatccaagatcaatcggtgaacaattagatgtaaatcgatcacgagtagacattgtacctattcat |
206 |
Q |
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| T |
46820561 |
caaaacaaagatcaagataggtcttgttgacatcaatccaagatcaatcggtgaacaattagatggaaatcgatcacgagtagacattgtacctattcat |
46820462 |
T |
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| Q |
207 |
tttgaccgtgttagcgagaat |
227 |
Q |
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| T |
46820461 |
tttgaccgtgttagcgagaat |
46820441 |
T |
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