View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19573_low_3 (Length: 443)

Name: NF19573_low_3
Description: NF19573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19573_low_3
NF19573_low_3
[»] chr8 (4 HSPs)
chr8 (51-426)||(41958248-41958623)
chr8 (15-177)||(40841569-40841729)
chr8 (108-221)||(44436080-44436192)
chr8 (134-191)||(22816489-22816546)
[»] chr5 (8 HSPs)
chr5 (108-356)||(38000862-38001110)
chr5 (349-426)||(38001211-38001290)
chr5 (234-347)||(40691020-40691133)
chr5 (122-177)||(27026652-27026707)
chr5 (134-191)||(6308666-6308723)
chr5 (156-209)||(30909807-30909860)
chr5 (281-346)||(30909953-30910018)
chr5 (156-209)||(40687609-40687662)
[»] chr1 (8 HSPs)
chr1 (115-343)||(26317201-26317430)
chr1 (134-209)||(36386841-36386914)
chr1 (281-357)||(338270-338346)
chr1 (234-347)||(8421712-8421825)
chr1 (108-190)||(8421591-8421672)
chr1 (353-399)||(43407609-43407655)
chr1 (269-344)||(43407771-43407846)
chr1 (108-209)||(338077-338177)
[»] chr7 (8 HSPs)
chr7 (15-177)||(9993216-9993377)
chr7 (15-98)||(29587499-29587582)
chr7 (108-221)||(12196686-12196799)
chr7 (108-209)||(12911836-12911936)
chr7 (234-347)||(49170250-49170363)
chr7 (353-399)||(10289033-10289079)
chr7 (108-209)||(49170409-49170509)
chr7 (269-344)||(10289195-10289270)
[»] chr2 (13 HSPs)
chr2 (139-347)||(40729373-40729582)
chr2 (274-347)||(18292692-18292765)
chr2 (108-209)||(18292851-18292951)
chr2 (269-337)||(36732152-36732220)
chr2 (269-356)||(41340664-41340750)
chr2 (110-357)||(29270654-29270907)
chr2 (352-399)||(41340512-41340559)
chr2 (281-345)||(40447643-40447706)
chr2 (300-347)||(12774864-12774911)
chr2 (155-209)||(36732449-36732503)
chr2 (298-347)||(28267606-28267655)
chr2 (158-227)||(36732370-36732437)
chr2 (108-209)||(40447450-40447550)
[»] chr4 (5 HSPs)
chr4 (108-225)||(40458923-40459038)
chr4 (109-209)||(55162155-55162254)
chr4 (234-345)||(40459069-40459179)
chr4 (108-191)||(69267-69350)
chr4 (302-347)||(55162368-55162413)
[»] chr3 (8 HSPs)
chr3 (109-208)||(43278369-43278468)
chr3 (122-219)||(8730832-8730930)
chr3 (122-219)||(9082719-9082817)
chr3 (269-356)||(43278240-43278326)
chr3 (353-399)||(7336936-7336982)
chr3 (269-344)||(7337098-7337173)
chr3 (134-177)||(9104217-9104260)
chr3 (134-191)||(17542815-17542872)
[»] scaffold0041 (1 HSPs)
scaffold0041 (276-347)||(33278-33349)
[»] chr6 (1 HSPs)
chr6 (108-174)||(24158893-24158959)
[»] scaffold0013 (1 HSPs)
scaffold0013 (108-177)||(243188-243257)


Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 51 - 426
Target Start/End: Complemental strand, 41958623 - 41958248
Alignment:
Q  51 ctctaaaagcactgagttgaaaggggagaaaagggtataaggtaagggnnnnnnnngccatacatccatattaagtgctagagctgtgttattaaatagt 150  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  41958623 ctctaaaagcactaagttgaaaggggagaaaagggtctaaggtaagggctttttc--ccatacatccatattaagtgctagagctgtgttattaaatagt 41958526  T
Q  151 ggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaatctaatcttttctgaaaatagttatttaattatgttctagat 250  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  41958525 ggtggcaattcttgtcttttaaaaaggcagataattaaaatgtagttttagggtaaaatctaatctttttttaaagtagttatttaattatgttctagat 41958426  T
Q  251 gatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagattttttgat 350  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41958425 gatatttatgaatgagagtgtgatgtgaaataatatattttatgctattatgctttatatgtttttgtgatgttggaaaagagatgttagattttttgat 41958326  T
Q  351 aaattaatagaagtctaaattgtagtatatgtgtgactaatcattgttttgtca--tgcatgataatgtgttactatt 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  41958325 aaattaatagaagtctaaattgtagtatatgtgtgactaatcattgttttgtcatgtgcatgataatgtgttattatt 41958248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 40841729 - 40841569
Alignment:
Q  15 agaaacatgaagtgtttgatcgtgcgtttggagattctctaaaagcactgagttgaaaggggagaaaagggtataaggtaagggnnnnnnnngccataca 114  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||||         ||||||     
T  40841729 agaaacatgaagtgtttgttcgtgcgtttggagattctctaaaaacactaagttgaaaggggagaaaagggtctaatgtaagggctttttc--ccatacg 40841632  T
Q  115 tccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaaga 177  Q
    | | || |||||| |||  ||||||||||||||||||||  ||||||||||||||| ||||||    
T  40841631 ttcttactaagtgttaggactgtgttattaaatagtggtagcaattcttgtcttttgaaaaga 40841569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 44436080 - 44436192
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||| || ||| |||||||||  | |||||||||||||||||||  |||||||||||||||||||||| | |||||||||||||| ||| |  |||||    
T  44436080 ccatacgtcaatactaagtgctaaggatgtgttattaaatagtggtagcaattcttgtcttttaaaaagaaaaataattaaaatgtatttttaaagtaaa 44436179  T
Q  208 atctaatcttttct 221  Q
    || |||||||||||    
T  44436180 at-taatcttttct 44436192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 22816546 - 22816489
Alignment:
Q  134 ctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaat 191  Q
    ||||||||||||||||||||  |||||||||||| || |||||| | | |||||||||    
T  22816546 ctgtgttattaaatagtggttgcaattcttgtctcttgaaaagaaaaacaattaaaat 22816489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 108 - 356
Target Start/End: Original strand, 38000862 - 38001110
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38000862 ccatacgtccatactaagtgctagagctgtgttattaaataatggtagcaattcttgtcttttaaaaagacagataattaaaatatagtttcagggtaaa 38000961  T
Q  208 atctaatcttttctgaaaatagttatttaattatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgcttta 307  Q
     ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38000962 gtctaatcttttctgaaagtagttatttaatcatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgcttta 38001061  T
Q  308 tatgtttttgtgacgttggaaaagagatgttagattttttgataaatta 356  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38001062 tatgtttttgtgatgttggaaaagagatgttagattttttgataaatta 38001110  T

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Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 38001211 - 38001290
Alignment:
Q  349 ataaattaatagaagtctaaattgtagtatatgtgtgactaatcattgttttgtca--tgcatgataatgtgttactatt 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  38001211 ataaattaatagaagtctaaattgtagtatatgtgtgactaatcattgttttgtcatgtgcatgataatgtgttattatt 38001290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 347
Target Start/End: Original strand, 40691020 - 40691133
Alignment:
Q  234 ttaattatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagag 333  Q
    ||||||||||| ||||||| | || || |||| | |||| |||||| |||||||||||||   | |  ||||||||||||||||||| |||||||||||     
T  40691020 ttaattatgttttagatgaaagttgtgtatgataatgtggtgtgaattgatatattttatatcaatgcgctttatatgtttttgtgatgttggaaaagaa 40691119  T
Q  334 atgttagatttttt 347  Q
    |||||| |||||||    
T  40691120 atgttacatttttt 40691133  T

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Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 27026652 - 27026707
Alignment:
Q  122 taagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaaga 177  Q
    ||||||||||   ||||||||||||||||||| |||||||||||||||| ||||||    
T  27026652 taagtgctaggattgtgttattaaatagtggtaacaattcttgtcttttgaaaaga 27026707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 6308666 - 6308723
Alignment:
Q  134 ctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaat 191  Q
    ||||||||||||||||||||  |||||||||||| || |||||| | |||||||||||    
T  6308666 ctgtgttattaaatagtggtagcaattcttgtctcttgaaaagaaaaataattaaaat 6308723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 30909807 - 30909860
Alignment:
Q  156 caattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaat 209  Q
    |||||||||||||||||||||| | |||||||||| ||| ||||| ||||||||    
T  30909807 caattcttgtcttttaaaaagaaaaataattaaaacgtaatttcatggtaaaat 30909860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 30909953 - 30910018
Alignment:
Q  281 tgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagattttt 346  Q
    |||||||||||||  ||||||||||||||||||||| | | ||||||||||  |||||| ||||||    
T  30909953 tgatatattttatattattatgctttatatgttttttttatgttggaaaagtaatgttacattttt 30910018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 40687609 - 40687662
Alignment:
Q  156 caattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaat 209  Q
    |||||||||||||||||||||| | |||||||||| ||| ||||| | ||||||    
T  40687609 caattcttgtcttttaaaaagaaaaataattaaaacgtattttcatgataaaat 40687662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 343
Target Start/End: Original strand, 26317201 - 26317430
Alignment:
Q  115 tccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaatctaat 214  Q
    |||||| |||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||| | ||| |||||||||| ||| || ||||||| ||||    
T  26317201 tccataataagtgctagggctgtggtattaaatagtggtagcaattcttgtcttttaagaagaaaaatagttaaaatgta-tttgagagtaaaatttaat 26317299  T
Q  215 cttttctgaaaatagttat--ttaattatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgctttatatgt 312  Q
    ||||||| ||| | |||||  |||||| |||  || ||||||||| || |||| | ||||||||  ||||||||||||||||  |||||| ||||||| |    
T  26317300 cttttctaaaagtggttattcttaattttgtattatatgatatttgtgtatgaaaatgtgatgtagaatgatatattttatgtgattatgttttatatat 26317399  T
Q  313 ttttgtgacgttggaaaagagatgttagatt 343  Q
     ||||||| ||||| ||||| ||||||||||    
T  26317400 ctttgtgatgttgggaaagaaatgttagatt 26317430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 36386914 - 36386841
Alignment:
Q  134 ctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaat 209  Q
    ||||||||||||||||||||  |||||||||||||||||||||| | |||||||||  ||| ||||| ||||||||    
T  36386914 ctgtgttattaaatagtggtagcaattcttgtcttttaaaaagaaaaataattaaa--gtattttcatggtaaaat 36386841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 338270 - 338346
Alignment:
Q  281 tgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagatttt-ttgataaattaa 357  Q
    |||||||||||||  |||||||||||||||| ||||||| |||||||||||| |||||| ||||| ||||| ||||||    
T  338270 tgatatattttatattattatgctttatatg-ttttgtggcgttggaaaagaaatgttacattttcttgatgaattaa 338346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 347
Target Start/End: Original strand, 8421712 - 8421825
Alignment:
Q  234 ttaattatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagag 333  Q
    ||||||||||| || |||| | || || |||| | |||| |||||| |||||||||||||  || |  |||||||||||| |||||| |||||||||||     
T  8421712 ttaattatgttttatatgaaagttgtgtatgataatgtggtgtgaattgatatattttatattaatgcgctttatatgttcttgtgatgttggaaaagaa 8421811  T
Q  334 atgttagatttttt 347  Q
    |||||| |||||||    
T  8421812 atgttacatttttt 8421825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 8421591 - 8421672
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaa 190  Q
    |||||| | |||| |||||||||| ||||||||||||| |||  ||  |||||||||||||||||||||| | ||||||||||    
T  8421591 ccatacgtacatactaagtgctag-gctgtgttattaagtagaagtagcaattcttgtcttttaaaaagaaaaataattaaaa 8421672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 43407655 - 43407609
Alignment:
Q  353 attaatagaagtctaaattgtagtatatgtgtgactaatcattgttt 399  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||    
T  43407655 attaatagaagtctaaatttaagtatatgtgtggctaatcattgttt 43407609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 43407846 - 43407771
Alignment:
Q  269 tgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagattt 344  Q
    ||||||||||| || | | ||||||  |||||||||| ||||||| |||||| || || |||||||||||||||||    
T  43407846 tgtgatgtgaactggtttgttttatattattatgcttgatatgttcttgtgatgtagggaaagagatgttagattt 43407771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 338077 - 338177
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||| |||||| ||||||||||| || ||||||||| ||| |||   |||||||||||| |||||||| | ||| |||||| ||| |||||  |||||    
T  338077 ccatacgtccatactaagtgctaga-ctatgttattaagtagaggtagtaattcttgtcttctaaaaagaaaaatagttaaaacgtattttcatagtaaa 338175  T
Q  208 at 209  Q
    ||    
T  338176 at 338177  T

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Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 177
Target Start/End: Original strand, 9993216 - 9993377
Alignment:
Q  15 agaaacatgaagtgtttgatcgtgcgtttggagattctctaaaagcactgagttgaaaggggagaaaagggtataaggtaagggnnnnnnnngccataca 114  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||         ||| ||     
T  9993216 agaaacatgaagtgtttgttcgtgcatttggagattctctaaaagcactaagttgaaaggggagaaaagggtctaaggtaagggctttttcc-ccacacg 9993314  T
Q  115 tccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaaga 177  Q
    | | || |||||||||| ||| ||||||||||||| ||| |||||||||||||||| ||||||    
T  9993315 ttcttactaagtgctagggctttgttattaaataggggtaacaattcttgtcttttgaaaaga 9993377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 29587499 - 29587582
Alignment:
Q  15 agaaacatgaagtgtttgatcgtgcgtttggagattctctaaaagcactgagttgaaaggggagaaaagggtataaggtaaggg 98  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||    
T  29587499 agaaacatgaagtgttagttcgtgcgtttgaagattctctaaaagcactaagttgaaaggggagaaaagcgtctaaggtaaggg 29587582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 12196799 - 12196686
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||||| | || ||||||| ||  || |||||||||||||||||  |||||||||||||||||||||| | |||||||||||||| ||| | ||| ||    
T  12196799 ccatacattcttactaagtgcaaggactatgttattaaatagtggtagcaattcttgtcttttaaaaagaaaaataattaaaatgtatttttacggtgaa 12196700  T
Q  208 atctaatcttttct 221  Q
    |  |||||||||||    
T  12196699 aattaatcttttct 12196686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 12911936 - 12911836
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||| |||||| |||||||||| | ||||||||||| ||  |||  ||||| |||||||||||||||| | |||||||||||||| ||||| ||||||    
T  12911936 ccatacgtccatactaagtgctag-gttgtgttattaagtaaaggtagcaatttttgtcttttaaaaagaaaaataattaaaatgtattttcatggtaaa 12911838  T
Q  208 at 209  Q
    ||    
T  12911837 at 12911836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 347
Target Start/End: Complemental strand, 49170363 - 49170250
Alignment:
Q  234 ttaattatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagag 333  Q
    ||||||||||| || |||| | || || |||| | | || |||||| |||||||||||||  || |  ||||||||||||||||||| |||||||||||     
T  49170363 ttaattatgttttatatgaaagttgtgtatgataatatggtgtgaattgatatattttatattaatgcgctttatatgtttttgtgatgttggaaaagaa 49170264  T
Q  334 atgttagatttttt 347  Q
    |||||| |||||||    
T  49170263 atgttacatttttt 49170250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 10289079 - 10289033
Alignment:
Q  353 attaatagaagtctaaattgtagtatatgtgtgactaatcattgttt 399  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||    
T  10289079 attaatagaagtctaaatttaagtatatgtgtggctaatcattgttt 10289033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 49170509 - 49170409
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||| |||||| |||||| ||  ||||||||||||| |||  ||  |||||||||||||||||||||| | ||||||||||  || ||||| ||||||    
T  49170509 ccatacgtccatactaagtgttac-gctgtgttattaagtagaagtagcaattcttgtcttttaaaaagaaaaataattaaaacctattttcatggtaaa 49170411  T
Q  208 at 209  Q
    ||    
T  49170410 at 49170409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 10289270 - 10289195
Alignment:
Q  269 tgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagattt 344  Q
    ||||||||||| || | | ||||||  |||||||||| ||||||| |||||| || || |||||||||||||||||    
T  10289270 tgtgatgtgaactggtttgttttatattattatgcttgatatgttcttgtgatgtagggaaagagatgttagattt 10289195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 8e-28; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 139 - 347
Target Start/End: Complemental strand, 40729582 - 40729373
Alignment:
Q  139 ttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaatctaatcttttctgaaaatagttatt--ta 236  Q
    ||||||| ||| |||  |||||||||||||||||||||| | || ||||||| ||| ||||| |||||||| ||||| ||||| ||| |  |||||  ||    
T  40729582 ttattaagtagaggtagcaattcttgtcttttaaaaagaaaaatgattaaaacgtattttcatggtaaaat-taatcctttctaaaagtgtttattctta 40729484  T
Q  237 attatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatg 336  Q
    |||||||| || |||  | || || |||| | |||| |||||| |||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||    
T  40729483 attatgttttatatggaaattgtgtatgataatgtggtgtgaattgatatattttatattattatgctttatatgtttttgtgatgttggaaaagaaatg 40729384  T
Q  337 ttagatttttt 347  Q
     || |||||||    
T  40729383 ctatatttttt 40729373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 347
Target Start/End: Complemental strand, 18292765 - 18292692
Alignment:
Q  274 tgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagatttttt 347  Q
    |||||| |||||||||||||  ||||||||||||||| ||||||||| ||||||||||| |||||| |||||||    
T  18292765 tgtgaattgatatattttatattattatgctttatatatttttgtgatgttggaaaagaaatgttacatttttt 18292692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 18292951 - 18292851
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||| |||||| |||||||||| ||||||||||||| ||| |||  |||||||||||||||||||||| | ||| |||||||||| ||| | ||||||    
T  18292951 ccatacgtccatactaagtgctag-gctgtgttattaagtagaggtagcaattcttgtcttttaaaaagaaaaatagttaaaatgtatttttatggtaaa 18292853  T
Q  208 at 209  Q
    ||    
T  18292852 at 18292851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 36732220 - 36732152
Alignment:
Q  269 tgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgt 337  Q
    |||| |||||| |||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||    
T  36732220 tgtggtgtgaattgatatattttatattattatgctttatatgtttttgtgatgctggaaaagaaatgt 36732152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 356
Target Start/End: Complemental strand, 41340750 - 41340664
Alignment:
Q  269 tgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagattttttgataaatta 356  Q
    ||||||||||| || ||| ||||||  |||||||||| ||||||| |||||| || || ||||||||||||||| |||||||||||||    
T  41340750 tgtgatgtgaactggtatgttttatattattatgcttgatatgttcttgtgatgtagggaaagagatgttagat-ttttgataaatta 41340664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 357
Target Start/End: Original strand, 29270654 - 29270907
Alignment:
Q  110 atacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaa--atgtagtttcagggtaaa 207  Q
    |||| |||||| |||||| ||| | |||| ||||||||||||||  ||||||||||||||| |||||| | | |||||||  |||||||| ||  |||||    
T  29270654 atacgtccatactaagtgttagggttgtgctattaaatagtggtagcaattcttgtcttttgaaaagaaaaacaattaaaatatgtagttacatagtaaa 29270753  T
Q  208 atctaatcttttctgaaaatagtta-tttaattatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatatttt-----atgctattat 301  Q
    || |||| |||| | |||||  ||| ||||||||| || ||  |||||||| || |||||| ||||||||| |||  ||| ||||      || ||||||    
T  29270754 atttaatattttataaaaattattattttaattatatt-tatttgatatttgtgtatgagaatgtgatgtggaattgtattttttttttgttgttattat 29270852  T
Q  302 gctttatatgtttttgtgacgttggaaaagagatgttagattttttgataaattaa 357  Q
    | ||| |||| ||||| || ||||||||||  |||||| | |||||||||||||||    
T  29270853 gatttgtatgcttttgcgatgttggaaaagttatgttaca-tttttgataaattaa 29270907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 41340559 - 41340512
Alignment:
Q  352 aattaatagaagtctaaattgtagtatatgtgtgactaatcattgttt 399  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||    
T  41340559 aattaatagaagtctaaatttaagtatatgtgtggctaatcattgttt 41340512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 40447643 - 40447706
Alignment:
Q  281 tgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagatttt 345  Q
    |||||||||||||  |||||||||||||||| ||||||| |||||||||||  |||||| |||||    
T  40447643 tgatatattttatattattatgctttatatg-ttttgtggcgttggaaaagtaatgttacatttt 40447706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 12774911 - 12774864
Alignment:
Q  300 atgctttatatgtttttgtgacgttggaaaagagatgttagatttttt 347  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||||||||    
T  12774911 atgctttatttgtttttgtgatgttagaaaagaaatgttagatttttt 12774864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 36732503 - 36732449
Alignment:
Q  155 acaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaat 209  Q
    ||||||||||||||||||||||| | ||||||||||  || ||||| ||||||||    
T  36732503 acaattcttgtcttttaaaaagaaaaataattaaaacatattttcatggtaaaat 36732449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 28267655 - 28267606
Alignment:
Q  298 ttatgctttatatgtttttgtgacgttggaaaagagatgttagatttttt 347  Q
    ||||||||||| ||||||||||| ||| | ||||| ||||||||||||||    
T  28267655 ttatgctttatttgtttttgtgatgttaggaaagaaatgttagatttttt 28267606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 36732437 - 36732370
Alignment:
Q  158 attcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaatctaatcttttctgaaaat 227  Q
    |||||||||||||||||||| | |||||||||| ||| ||||| |||||||| ||||| ||||| |||||    
T  36732437 attcttgtcttttaaaaaga-aaataattaaaacgtattttcatggtaaaat-taatcctttctaaaaat 36732370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 40447450 - 40447550
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||| |||||| ||||||||||| || ||||||||| ||| |||   |||||||||||| |||||||| | ||| |||||| ||| |||||  |||||    
T  40447450 ccatacgtccatactaagtgctaga-ctatgttattaagtagaggtagtaattcttgtcttctaaaaagaaaaatagttaaaacgtattttcatagtaaa 40447548  T
Q  208 at 209  Q
    ||    
T  40447549 at 40447550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 40458923 - 40459038
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaa 207  Q
    |||||| |||||| ||||||||||| |||||||||||| ||| |||  |||||||||||||||||||||| | |||||||||| ||| ||||| ||||||    
T  40458923 ccatacgtccatactaagtgctaga-ctgtgttattaagtagaggtagcaattcttgtcttttaaaaagaaaaataattaaaacgtattttcatggtaaa 40459021  T
Q  208 atctaatcttttctgaaa 225  Q
    || ||||| |||||||||    
T  40459022 at-taatcctttctgaaa 40459038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 55162155 - 55162254
Alignment:
Q  109 catacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaa 208  Q
    ||||| |||||| ||||||||||| |||||||||||| |||  ||  |||||||||||||||||||||| | |||||||||| ||| ||||| |||||||    
T  55162155 catacgtccatactaagtgctaga-ctgtgttattaagtagaagtagcaattcttgtcttttaaaaagaaaaataattaaaacgtattttcatggtaaaa 55162253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 345
Target Start/End: Original strand, 40459069 - 40459179
Alignment:
Q  234 ttaattatgttctagatgatatttatgaatgagagtgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagag 333  Q
    ||||||||||| || |||| | || || |||| | |||| |||||| |||||||||||||  |||||||||||||||| |||||||| |||||||||||     
T  40459069 ttaattatgttttatatgaaagttgtgtatgataatgtggtgtgaattgatatattttatattattatgctttatatg-ttttgtgatgttggaaaagaa 40459167  T
Q  334 atgttagatttt 345  Q
    |||||| |||||    
T  40459168 atgttacatttt 40459179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 69267 - 69350
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaat 191  Q
    |||||| |||||| |||||| |||  ||||||||||||||||||||  |||||||||||| || |||||| | | |||||||||    
T  69267 ccatacgtccatactaagtgttaggactgtgttattaaatagtggtagcaattcttgtctcttgaaaagaaaaacaattaaaat 69350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 55162368 - 55162413
Alignment:
Q  302 gctttatatgtttttgtgacgttggaaaagagatgttagatttttt 347  Q
    ||||||||||||||||||| ||||||||||| |||||| |||||||    
T  55162368 gctttatatgtttttgtgatgttggaaaagaaatgttacatttttt 55162413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 43278468 - 43278369
Alignment:
Q  109 catacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatgtagtttcagggtaaaa 208  Q
    ||||| ||||||||||||| ||| ||||||| |||||||||||||  |||| |||||||| |||||||| | |||||||||||||| ||| | |||||||    
T  43278468 catacgtccatattaagtgttagggctgtgtcattaaatagtggtagcaatgcttgtcttataaaaagaaaaataattaaaatgtatttttatggtaaaa 43278369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 8730832 - 8730930
Alignment:
Q  122 taagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatg--tagtttcagggtaaaatctaatctttt 219  Q
    |||||||||| ||| |||||||||||||| |||  ||||||||||||||||||||| | |||| |||||||  || |||||||||||||| |||||||||    
T  8730832 taagtgctagggctatgttattaaatagtagtggtaattcttgtcttttaaaaagaaaaataa-taaaatgtatattttcagggtaaaatttaatctttt 8730930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 9082719 - 9082817
Alignment:
Q  122 taagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaatg--tagtttcagggtaaaatctaatctttt 219  Q
    |||||||||| ||| |||||||||||||| |||  ||||||||||||||||||||| | |||| |||||||  || |||||||||||||| |||||||||    
T  9082719 taagtgctagggctatgttattaaatagtagtggtaattcttgtcttttaaaaagaaaaataa-taaaatgtatattttcagggtaaaatttaatctttt 9082817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 356
Target Start/End: Complemental strand, 43278326 - 43278240
Alignment:
Q  269 tgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagattttttgataaatta 356  Q
    ||||||||||| || | | ||||||  |||||||||| ||||||| |||||| || || ||||||||||||||| |||||||||||||    
T  43278326 tgtgatgtgaactggtttgttttatattattatgcttgatatgttcttgtgatgtagggaaagagatgttagat-ttttgataaatta 43278240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 7336982 - 7336936
Alignment:
Q  353 attaatagaagtctaaattgtagtatatgtgtgactaatcattgttt 399  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||    
T  7336982 attaatagaagtctaaatttaagtatatgtgtggctaatcattgttt 7336936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 7337173 - 7337098
Alignment:
Q  269 tgtgatgtgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagattt 344  Q
    ||||||||||| || | | ||||||  |||||||||| ||||||| |||||| || || |||||||||||||||||    
T  7337173 tgtgatgtgaactggtttgttttatattattatgcttgatatgttcttgtgatgtagggaaagagatgttagattt 7337098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 9104217 - 9104260
Alignment:
Q  134 ctgtgttattaaatagtggtgacaattcttgtcttttaaaaaga 177  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||    
T  9104217 ctgtgttattaaatagtggtagcaattcttgtcttttgaaaaga 9104260  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 17542872 - 17542815
Alignment:
Q  134 ctgtgttattaaatagtggtgacaattcttgtcttttaaaaagacagataattaaaat 191  Q
    ||||||||||||||||||||  |||||||||||| || |||||| | | |||||||||    
T  17542872 ctgtgttattaaatagtggtagcaattcttgtctcttgaaaagaaaaacaattaaaat 17542815  T

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Target: scaffold0041 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 33349 - 33278
Alignment:
Q  276 tgaaatgatatattttatgctattatgctttatatgtttttgtgacgttggaaaagagatgttagatttttt 347  Q
    |||| |||||||||||||  ||||||| ||||||||||||||||| || |||||||| |||||| |||||||    
T  33349 tgaattgatatattttatcttattatgttttatatgtttttgtgatgtaggaaaagaaatgttacatttttt 33278  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 24158893 - 24158959
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaa 174  Q
    ||||||||||||| || ||||||| ||||| ||||||| |||||||  |||||||||| ||| ||||    
T  24158893 ccatacatccatactacgtgctagggctgtcttattaattagtggtagcaattcttgtatttgaaaa 24158959  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 243257 - 243188
Alignment:
Q  108 ccatacatccatattaagtgctagagctgtgttattaaatagtggtgacaattcttgtcttttaaaaaga 177  Q
    |||||||| | || |||||| ||| ||| ||||||||||||| |||  ||||||||||||||| ||||||    
T  243257 ccatacattcttactaagtgttagggctttgttattaaataggggtatcaattcttgtcttttgaaaaga 243188  T

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