View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19575_low_12 (Length: 343)

Name: NF19575_low_12
Description: NF19575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19575_low_12
NF19575_low_12
[»] chr3 (24 HSPs)
chr3 (20-245)||(49917628-49917853)
chr3 (254-329)||(39020146-39020221)
chr3 (254-329)||(10206960-10207041)
chr3 (254-329)||(24482950-24483031)
chr3 (254-329)||(49363238-49363319)
chr3 (254-329)||(50206957-50207038)
chr3 (274-329)||(46253651-46253706)
chr3 (275-329)||(11633643-11633697)
chr3 (254-329)||(37508485-37508566)
chr3 (272-329)||(30909056-30909113)
chr3 (277-329)||(390841-390893)
chr3 (254-329)||(39671084-39671166)
chr3 (254-329)||(8821633-8821714)
chr3 (254-329)||(44677471-44677552)
chr3 (254-329)||(36121829-36121905)
chr3 (273-329)||(55400027-55400083)
chr3 (274-329)||(46019491-46019546)
chr3 (287-329)||(24645398-24645440)
chr3 (272-329)||(32767703-32767760)
chr3 (272-329)||(33375887-33375944)
chr3 (272-313)||(48405437-48405478)
chr3 (273-313)||(25641574-25641614)
chr3 (275-319)||(37302575-37302619)
chr3 (272-320)||(55013030-55013078)
[»] chr7 (17 HSPs)
chr7 (242-329)||(43573530-43573623)
chr7 (277-329)||(38779731-38779783)
chr7 (254-329)||(13162922-13163003)
chr7 (254-329)||(19786066-19786147)
chr7 (254-329)||(39231715-39231796)
chr7 (272-329)||(16980324-16980381)
chr7 (272-329)||(29002635-29002692)
chr7 (249-329)||(39331983-39332069)
chr7 (254-329)||(13729729-13729810)
chr7 (254-329)||(21559801-21559882)
chr7 (272-329)||(28036771-28036828)
chr7 (272-329)||(32815195-32815252)
chr7 (274-329)||(44184546-44184601)
chr7 (272-329)||(11564920-11564977)
chr7 (272-313)||(41402534-41402575)
chr7 (272-312)||(13437225-13437264)
chr7 (273-329)||(41893943-41893999)
[»] chr6 (16 HSPs)
chr6 (272-329)||(754425-754482)
chr6 (254-329)||(3610948-3611029)
chr6 (247-329)||(35213548-35213636)
chr6 (272-329)||(13143369-13143426)
chr6 (254-329)||(2075438-2075519)
chr6 (254-329)||(4820254-4820335)
chr6 (254-329)||(30036781-30036862)
chr6 (272-329)||(30152517-30152574)
chr6 (275-323)||(2777309-2777357)
chr6 (273-329)||(11547516-11547572)
chr6 (273-329)||(18141288-18141344)
chr6 (273-329)||(20822855-20822911)
chr6 (277-329)||(34504052-34504104)
chr6 (254-310)||(14986751-14986809)
chr6 (273-313)||(17551382-17551422)
chr6 (235-267)||(23628344-23628376)
[»] chr1 (28 HSPs)
chr1 (248-329)||(36577399-36577486)
chr1 (272-329)||(51191815-51191872)
chr1 (249-329)||(3603109-3603195)
chr1 (249-329)||(35136842-35136928)
chr1 (254-329)||(8411705-8411786)
chr1 (254-329)||(46082108-46082189)
chr1 (272-329)||(9008252-9008309)
chr1 (272-329)||(21340549-21340606)
chr1 (272-323)||(1790535-1790586)
chr1 (254-329)||(756859-756940)
chr1 (254-329)||(902641-902722)
chr1 (254-313)||(1852954-1853019)
chr1 (254-313)||(33024574-33024639)
chr1 (272-329)||(33054075-33054132)
chr1 (272-329)||(50328128-50328185)
chr1 (273-329)||(10890033-10890089)
chr1 (273-329)||(13489690-13489746)
chr1 (273-329)||(32915059-32915115)
chr1 (254-313)||(7128121-7128186)
chr1 (273-323)||(15705055-15705105)
chr1 (275-329)||(20565105-20565159)
chr1 (275-329)||(26837482-26837536)
chr1 (275-329)||(29586023-29586077)
chr1 (275-328)||(4514442-4514495)
chr1 (280-329)||(36779256-36779305)
chr1 (272-313)||(48325994-48326035)
chr1 (273-329)||(47214236-47214292)
chr1 (273-329)||(52362510-52362566)
[»] chr4 (25 HSPs)
chr4 (254-329)||(624299-624380)
chr4 (254-329)||(22819652-22819733)
chr4 (275-329)||(47965769-47965823)
chr4 (272-329)||(46405961-46406018)
chr4 (246-329)||(14451388-14451477)
chr4 (254-329)||(30079849-30079930)
chr4 (254-329)||(39344967-39345048)
chr4 (254-329)||(41486130-41486211)
chr4 (272-313)||(21260325-21260366)
chr4 (272-329)||(47099049-47099106)
chr4 (273-329)||(6141765-6141821)
chr4 (254-329)||(14010105-14010186)
chr4 (272-313)||(5932160-5932201)
chr4 (272-329)||(13086049-13086106)
chr4 (273-329)||(9118851-9118907)
chr4 (248-329)||(26206964-26207051)
chr4 (275-319)||(36111393-36111437)
chr4 (274-329)||(38338909-38338964)
chr4 (254-329)||(14527647-14527728)
chr4 (254-329)||(51887666-51887747)
chr4 (272-329)||(51194296-51194353)
chr4 (273-329)||(23822232-23822288)
chr4 (273-329)||(28458364-28458420)
chr4 (273-329)||(30170007-30170063)
chr4 (277-329)||(53152308-53152360)
[»] chr8 (23 HSPs)
chr8 (272-329)||(7592876-7592933)
chr8 (247-329)||(16872143-16872231)
chr8 (273-329)||(30136002-30136058)
chr8 (274-329)||(7955994-7956049)
chr8 (254-329)||(1633877-1633958)
chr8 (272-329)||(11657987-11658044)
chr8 (247-329)||(16613630-16613718)
chr8 (272-329)||(37783958-37784015)
chr8 (273-329)||(11017833-11017889)
chr8 (273-329)||(40739899-40739955)
chr8 (274-329)||(16327139-16327194)
chr8 (254-313)||(16966788-16966853)
chr8 (273-323)||(34018836-34018886)
chr8 (272-329)||(33589217-33589274)
chr8 (247-329)||(34718111-34718199)
chr8 (273-329)||(4658250-4658306)
chr8 (273-319)||(2730958-2731004)
chr8 (254-329)||(36110141-36110222)
chr8 (254-329)||(41520971-41521052)
chr8 (272-313)||(32847690-32847731)
chr8 (272-313)||(34490160-34490201)
chr8 (273-329)||(12707177-12707233)
chr8 (275-319)||(37449423-37449467)
[»] chr5 (19 HSPs)
chr5 (272-329)||(21064213-21064270)
chr5 (254-329)||(4430923-4431004)
chr5 (254-329)||(35098992-35099073)
chr5 (275-329)||(43441768-43441822)
chr5 (254-329)||(5042251-5042332)
chr5 (254-329)||(8267807-8267888)
chr5 (254-329)||(8675420-8675501)
chr5 (254-329)||(18842308-18842389)
chr5 (254-329)||(2688973-2689045)
chr5 (272-329)||(15267811-15267868)
chr5 (273-329)||(6517740-6517796)
chr5 (274-313)||(16437568-16437607)
chr5 (254-329)||(9977122-9977203)
chr5 (272-329)||(5821599-5821656)
chr5 (274-323)||(6446511-6446560)
chr5 (272-329)||(6931046-6931103)
chr5 (272-329)||(33620635-33620692)
chr5 (273-329)||(10649463-10649519)
chr5 (273-329)||(20770159-20770215)
[»] scaffold0687 (1 HSPs)
scaffold0687 (275-329)||(2227-2281)
[»] scaffold0321 (1 HSPs)
scaffold0321 (254-329)||(19639-19720)
[»] chr2 (16 HSPs)
chr2 (254-329)||(13347802-13347883)
chr2 (254-329)||(35589374-35589455)
chr2 (272-329)||(39213757-39213814)
chr2 (272-329)||(39449294-39449351)
chr2 (254-313)||(18176943-18177008)
chr2 (254-329)||(36802899-36802980)
chr2 (273-329)||(6999055-6999111)
chr2 (254-313)||(17779394-17779454)
chr2 (272-328)||(29684600-29684656)
chr2 (254-329)||(37257452-37257534)
chr2 (287-329)||(9634423-9634465)
chr2 (272-313)||(12889835-12889876)
chr2 (272-329)||(16677699-16677756)
chr2 (254-313)||(4758642-4758706)
chr2 (273-329)||(6170658-6170714)
chr2 (275-319)||(41042283-41042327)
[»] scaffold0221 (1 HSPs)
scaffold0221 (273-323)||(8242-8292)
[»] scaffold0471 (1 HSPs)
scaffold0471 (254-329)||(10-91)
[»] scaffold0449 (1 HSPs)
scaffold0449 (273-329)||(9231-9287)


Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 49917628 - 49917853
Alignment:
Q  20 gttaggatataaaaatcttgagatttagattcttttgttggataccaaaattgtaaaatcaacaattcttcatgcaaagttgataacgtttgagatcaac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49917628 gttaggatataaaaatcttgagatttagattcttttgttggataccaaaattgtaaaatcaacaattcttcatgcaaagttgataacgtttgagatcaac 49917727  T
Q  120 aaagcaaacaaaaattggttaattaaacaattcagaaatatgagagatttttcattggctttgcattggaaaagatttgaatgttacagcgccacgattt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49917728 aaagcaaacaaaaattggttaattaaacaattcagaaatatgagagatttttcattggctttgcattggaaaagatttgaatgttacagcgccacgattt 49917827  T
Q  220 ggtgtgcatgcattgttattattatt 245  Q
    ||||||||||||||||||||||||||    
T  49917828 ggtgtgcatgcattgttattattatt 49917853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 39020221 - 39020146
Alignment:
Q  254 aaatgatatttgaacatcgtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||   |||||||||| ||| |||||||||||||||| ||||||||| |||||||| |||||    
T  39020221 aaatgatatttgaacattcagacaacttttacaataactttttctctcatactcacattactttttactttatctc 39020146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 10207041 - 10206960
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  10207041 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 10206960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 24483031 - 24482950
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  24483031 aaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 24482950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 49363319 - 49363238
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  49363319 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 49363238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 50207038 - 50206957
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  50207038 aaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 50206957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 46253651 - 46253706
Alignment:
Q  274 gacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||    
T  46253651 gacaacttttgcaacaattttttctctcatactcacattactttttactttatctc 46253706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 11633643 - 11633697
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  11633643 acaacttttgcaacaactttctctctcatattcacattactttttactttatctc 11633697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 37508566 - 37508485
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  37508566 aaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacattactttttactttatctc 37508485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 30909056 - 30909113
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||| |||||||| |||||    
T  30909056 gtgacaacttttgcaacaactttctctcttatattcacattactttttactttatctc 30909113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 390841 - 390893
Alignment:
Q  277 aacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||| |||||    
T  390841 aacttttgcaacaactttttctctcatactcacattattttttactttatctc 390893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 39671166 - 39671084
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctc-tcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| |||| ||||| ||||||||| |||||||| |||||    
T  39671166 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctcttcatactcacattactttttactttatctc 39671084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 8821633 - 8821714
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||| ||||||||| ||||||||| ||||||||  |||||||| |||||    
T  8821633 aaatgatatttgaacatctatttagtgacaacttttgtaacaactttctctctcatactcacattattttttactttatctc 8821714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 44677552 - 44677471
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||| ||| ||||||||| ||||||||  |||||||| |||||    
T  44677552 aaatgatatttgaacatccatttagtgacaacttttgcaacaattttctctctcatactcacattattttttactttatctc 44677471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 36121829 - 36121905
Alignment:
Q  254 aaatgatatttgaacatcg-tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||   |||||||||||||||||||||| | ||| ||| |||| |||| |||||||| |||||    
T  36121829 aaatgatatttgaacataaatgacaacttttgcaacaactttctttcttatactcacgttactttttactttatctc 36121905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 55400027 - 55400083
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  55400027 tgacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 55400083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 46019491 - 46019546
Alignment:
Q  274 gacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  46019491 gacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 46019546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 24645398 - 24645440
Alignment:
Q  287 acaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||| ||||||||| |||||||| |||||    
T  24645398 acaactttttctctcatactcacattactttttactttatctc 24645440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 32767703 - 32767760
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||| || ||| ||||||||| ||||||||  |||||||| |||||    
T  32767703 gtgacaacttttgcaataattttctctctcatactcacattattttttactttatctc 32767760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 33375887 - 33375944
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||| |||||| ||| ||||||||| ||||||||  |||||||| |||||    
T  33375887 gtgacaacttttacaacaattttctctctcatactcacattattttttactttatctc 33375944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 48405437 - 48405478
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||    
T  48405437 gtgacaacttttgtaacaactttctctctcatactcacatta 48405478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 25641614 - 25641574
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  25641614 tgacaacttttgctacaactttgtctctcatactcacatta 25641574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 37302575 - 37302619
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattacctttt 319  Q
    ||||||||||  |||||||| ||||||||| ||||||||||||||    
T  37302575 acaacttttgtgacaactttctctctcatattcacattacctttt 37302619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 55013030 - 55013078
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattacctttta 320  Q
    |||| |||||||||||||||||| ||||| ||| ||||||||| |||||    
T  55013030 gtgataacttttgcaacaactttctctcttatattcacattacttttta 55013078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 43573623 - 43573530
Alignment:
Q  242 tattattatgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||| ||| ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  43573623 tattattttgagaaatgatatttgaacatctattttgtgacaacttttgcaacaactttctctctcatattcacattactttttactttatctc 43573530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 38779783 - 38779731
Alignment:
Q  277 aacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  38779783 aacttttgcaacaactttttctctcatactcacattattttttacttcatctc 38779731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 13162922 - 13163003
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||| ||||| |||||||| |||||    
T  13162922 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcatattactttttactttatctc 13163003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 19786147 - 19786066
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| |||| |||| ||||||||| |||||||| |||||    
T  19786147 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctcacatactcacattactttttactttatctc 19786066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 39231796 - 39231715
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  39231796 aaatgatatttgaacatccagttagtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctc 39231715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 16980324 - 16980381
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||| |||||||| |||||    
T  16980324 gtgacaacttttgcaacaactttctctcttatactcacattactttttactttatctc 16980381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 29002635 - 29002692
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| |||||| || ||||||||| |||||||| |||||    
T  29002635 gtgacaacttttgcaacaactttctctctcgtaatcacattactttttactttatctc 29002692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 39331983 - 39332069
Alignment:
Q  249 atgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||| ||||||||||||||||||      ||||||||||||| ||||||||| ||||| ||| ||||||||| |||||||| |||||    
T  39331983 atgagaaatgatatttgaacatccatttagtgacaacttttgtaacaactttctctcttatactcacattactttttactttatctc 39332069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 13729729 - 13729810
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| | ||||||| ||||||||  |||||||| |||||    
T  13729729 aaatgatatttgaacatccattttgtgacaacttttgcaacaactttctttctcatactcacattattttttactttatctc 13729810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 21559801 - 21559882
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||||||||||||| |||||||| ||||||||| ||||||||  |||||||| |||||    
T  21559801 aaatgatatttgaacatccattctgtgacaacttttgctacaactttatctctcatactcacattattttttactttatctc 21559882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 28036771 - 28036828
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||  |||||||| |||||    
T  28036771 gtgacaacttttgcaacaactttctctcttatactcacattattttttactttatctc 28036828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 32815195 - 32815252
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||  |||||||| |||||    
T  32815195 gtgacaatttttgcaacaattttttctctcatactcacattattttttactttatctc 32815252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 44184601 - 44184546
Alignment:
Q  274 gacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  44184601 gacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 44184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 11564920 - 11564977
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||| | |||||| ||||||||| ||||||||  |||||||| |||||    
T  11564920 gtgacaacttttgctataactttctctctcatactcacattattttttactttatctc 11564977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 41402534 - 41402575
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||    
T  41402534 gtgacaacttttgcaacaactttctctctcatactcatatta 41402575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 13437225 - 13437264
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatt 312  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  13437225 gtgacaacttttg-aacaactttttctctcatactcacatt 13437264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 41893943 - 41893999
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||| ||||| ||||||||| |||||||| |||||    
T  41893943 tgacaacttttgtgacaactttctctttcatactcacattactttttactttatctc 41893999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 754482 - 754425
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  754482 gtgacaacttttgcaacaactttttctctcatactcacattactttttactttatctc 754425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 3611029 - 3610948
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  3611029 aaatgatatttgaacatccatttagtgataacttttgcaacaactttttctctcatactcacattactttttactttatctc 3610948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 35213636 - 35213548
Alignment:
Q  247 ttatgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||| ||||||||||||||||||      ||||||||||||| ||||||||| ||||||||| ||||||||| |||||||| |||||    
T  35213636 ttatgagaaatgatatttgaacatctattttgtgacaacttttgtaacaactttctctctcatactcacattactttttactttatctc 35213548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 13143426 - 13143369
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  13143426 gtgacaatttttgcaacaactttctctctcatactcacattactttttactttatctc 13143369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 2075519 - 2075438
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||||| |||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  2075519 aaatgatatttgaacatccatttagtgacagcttttgcaacaactttctctctcatactcacattattttttactttatctc 2075438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 4820254 - 4820335
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  4820254 aaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacattattttttactttatctc 4820335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 30036862 - 30036781
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| |||||| |  |||||||| |||||    
T  30036862 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcataatcacataattttttactttatctc 30036781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 30152574 - 30152517
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||| |||||| |  |||||||| |||||    
T  30152574 gtgacaacttttgcaacaactttctctctcatactcacataattttttactttatctc 30152517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 2777357 - 2777309
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttactt 323  Q
    |||||||||||||||| ||| ||||||||| ||||||||| ||||||||    
T  2777357 acaacttttgcaacaattttctctctcatactcacattactttttactt 2777309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 11547572 - 11547516
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||| ||| ||||||||| ||||||||  |||||||| |||||    
T  11547572 tgacaacttttgcaacaattttctctctcatactcacattattttttactttatctc 11547516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 18141344 - 18141288
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  18141344 tgacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 18141288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 20822911 - 20822855
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  20822911 tgacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 20822855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 34504052 - 34504104
Alignment:
Q  277 aacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||| ||||||||| ||||||||| ||| |||| |||||    
T  34504052 aacttttgcaacaactttctctctcatactcacattacttttcactttatctc 34504104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 14986809 - 14986751
Alignment:
Q  254 aaatgatatttgaacatc--gtgacaacttttgcaacaactttttctctcatagtcaca 310  Q
    |||||||||||||||||   ||||||||||||||||||| ||| ||||||||| |||||    
T  14986809 aaatgatatttgaacatttagtgacaacttttgcaacaattttctctctcatactcaca 14986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 17551422 - 17551382
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    |||||||||||| ||||||||| ||||||||| ||||||||    
T  17551422 tgacaacttttgtaacaactttctctctcatactcacatta 17551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 23628344 - 23628376
Alignment:
Q  235 ttattattattattatgacaaatgatatttgaa 267  Q
    |||||||||||||||||| ||||||||||||||    
T  23628344 ttattattattattatgagaaatgatatttgaa 23628376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 36577486 - 36577399
Alignment:
Q  248 tatgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||| ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  36577486 tatgagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 36577399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 51191815 - 51191872
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| |||||||| |||||    
T  51191815 gtgacaacttttgtaacaactttttctctcatactcacattacattttactttatctc 51191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 3603109 - 3603195
Alignment:
Q  249 atgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||| ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| ||||| || |||||    
T  3603109 atgagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattactttttagtttatctc 3603195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 35136842 - 35136928
Alignment:
Q  249 atgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||| ||||||||||||||||||      ||||||||||||||||||||||| | ||||||| ||||||||| |||||||| |||||    
T  35136842 atgagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctttctcatactcacattactttttactttatctc 35136928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 8411786 - 8411705
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  8411786 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctc 8411705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 46082189 - 46082108
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| |||| |||| ||||||||| |||||||| |||||    
T  46082189 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctcgcatactcacattactttttactttatctc 46082108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 9008252 - 9008309
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  9008252 gtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctc 9008309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 21340549 - 21340606
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||| |||||||| |||||    
T  21340549 gtgacaacttttgcaacaactttctctttcatactcacattactttttactttatctc 21340606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 1790535 - 1790586
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttactt 323  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||    
T  1790535 gtgacaacttttgcaacaactttctctctcatactcaaattactttttactt 1790586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 756859 - 756940
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| | ||||||| ||||||||  |||||||| |||||    
T  756859 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctttctcatactcacattattttttactttatctc 756940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 902641 - 902722
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||  ||||||||| ||||||||| ||||||||| |||||||| |||||    
T  902641 aaatgatatttgaacatctatttagtgacaacttttataacaactttctctctcatactcacattactttttactttatctc 902722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 1853019 - 1852954
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||    
T  1853019 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacatta 1852954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 33024639 - 33024574
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||    
T  33024639 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacatta 33024574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 33054132 - 33054075
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||| |||||||| ||||||||| ||||||||  |||||||| |||||    
T  33054132 gtgacaacttttgctacaactttctctctcatactcacattattttttactttatctc 33054075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 50328185 - 50328128
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||| ||||| |||| |||| |||||||| |||||    
T  50328185 gtgacaacttttgcaacaactttctctttcatactcacgttactttttactttatctc 50328128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 10890089 - 10890033
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  10890089 tgacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 10890033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 13489690 - 13489746
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  13489690 tgacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 13489746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 32915115 - 32915059
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  32915115 tgacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 32915059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 7128121 - 7128186
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||      ||||||||||||||||||||||  ||||||||| ||||||||    
T  7128121 aaatgatatttgaacatccatttagtgacaacttttgcaacaacttcctctctcatattcacatta 7128186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 15705105 - 15705055
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttactt 323  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| ||||||||    
T  15705105 tgacaacttttgtgacaactttctctctcatactcacattactttttactt 15705055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 20565159 - 20565105
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||| ||||||||||||||| ||||||||| |||||||||  ||||||| |||||    
T  20565159 acaatttttgcaacaactttctctctcatactcacattactctttactttatctc 20565105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 26837482 - 26837536
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||| ||| ||||||||| |||| |||| |||||||| |||||    
T  26837482 acaacttttgcaacaattttctctctcatactcacgttactttttactttatctc 26837536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 29586023 - 29586077
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||| ||| ||||||||| ||||||||  |||||||| |||||    
T  29586023 acaacttttgcaacaattttctctctcatactcacattattttttactttatctc 29586077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 4514495 - 4514442
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttacttcatct 328  Q
    |||||||||||||||||||| | ||||||| ||||||||  |||||||| ||||    
T  4514495 acaacttttgcaacaactttctatctcatattcacattattttttactttatct 4514442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 36779305 - 36779256
Alignment:
Q  280 ttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||| ||||||| | ||||||| |||||||| |||||    
T  36779305 ttttgcaacaactttttttctcatacttacattactttttactttatctc 36779256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 48325994 - 48326035
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  48325994 gtgacaacttttgcaacaactttctctctcatacttacatta 48326035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 47214236 - 47214292
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||  |||||||| |||||    
T  47214236 tgacaacttttgtgacaactttctctctcatactcacattattttttactttatctc 47214292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 52362510 - 52362566
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||  |||||||| |||||    
T  52362510 tgacaacttttgtgacaactttctctctcatactcacattattttttactttatctc 52362566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 624380 - 624299
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  624380 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 624299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 22819652 - 22819733
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  22819652 aaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 22819733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 47965769 - 47965823
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  47965769 acaacttttgcaacaactttttctctcatactcacattactttttactttatctc 47965823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 46406018 - 46405961
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||| |||||    
T  46406018 gtgacaacttttgcaacaactttttctctcatactcacattaatttttactttatctc 46405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 329
Target Start/End: Original strand, 14451388 - 14451477
Alignment:
Q  246 attatgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||| ||||||||||||||||||      ||||||||||| ||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  14451388 attatgagaaatgatatttgaacatccatttagtgacaactttagcaacaactttctctctcatactcacattagtttttactttatctc 14451477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 30079849 - 30079930
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  30079849 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctc 30079930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 39345048 - 39344967
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||| ||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  39345048 aaatgatatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactcacattactttttactttatctc 39344967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 41486211 - 41486130
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  41486211 aaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacattactttttactttatctc 41486130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 21260325 - 21260366
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  21260325 gtgacaacttttgcaacaactttttctctcatactcacatta 21260366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 47099049 - 47099106
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| |||| |||| ||||||||| |||||||| |||||    
T  47099049 gtgacaacttttgcaacaactttctctcacatactcacattactttttactttatctc 47099106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 6141821 - 6141765
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||||| ||||||||| |||||||||  ||||||| |||||    
T  6141821 tgacaacttttgcaacaactttctctctcatactcacattactctttactttatctc 6141765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 14010186 - 14010105
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||||||||||| ||| |||||||||||||||| ||| ||||| |||||||| |||||    
T  14010186 aaatgatatttgaacatccattttgtgacaacttttacaataactttttctctcatactcatattactttttactttatctc 14010105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 5932201 - 5932160
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  5932201 gtgacaacttttgcaacaactttctctctcatactcacatta 5932160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 13086049 - 13086106
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||| ||||| || |||||    
T  13086049 gtgacaacttttgtaacaactttctctctcatactcacattactttttattttatctc 13086106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 9118907 - 9118851
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||| ||| ||||||||| ||||||||  |||||||| |||||    
T  9118907 tgacaacttttgcaacaattttctctctcataatcacattattttttactttatctc 9118851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 26207051 - 26206964
Alignment:
Q  248 tatgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||| ||||||||||||||||||      |||| || ||||||||||| ||| ||||||||| ||||||||| |||||||| |||||    
T  26207051 tatgagaaatgatatttgaacatccatttagtgataatttttgcaacaattttctctctcatattcacattactttttactttatctc 26206964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 36111437 - 36111393
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattacctttt 319  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||    
T  36111437 acaacttttgcaacaactttatctctcatactcacattacttttt 36111393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 38338964 - 38338909
Alignment:
Q  274 gacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  38338964 gacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 38338909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 14527647 - 14527728
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||||||||||||| ||||||||  |||||||| ||||||||  |||||||| |||||    
T  14527647 aaatgatatttgaacatccattttgtgacaacttttgctacaactttcactctcatactcacattattttttactttatctc 14527728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 51887666 - 51887747
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||||||||||||| |||||||| ||||||||| ||| ||||  |||||||| |||||    
T  51887666 aaatgatatttgaacatccattttgtgacaacttttgctacaactttctctctcatactcaaattattttttactttatctc 51887747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 51194296 - 51194353
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||| |||||||||| ||| ||||| |||||| || |||||||| |||||    
T  51194296 gtgacaacttttacaacaactttctctttcatactcacatcactttttactttatctc 51194353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 23822288 - 23822232
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||||| || |||||| ||| ||||  |||||||| |||||    
T  23822288 tgacaacttttgcaacaactttctccctcatattcatattattttttactttatctc 23822232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 28458420 - 28458364
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||  |||||||| |||||    
T  28458420 tgacaacttttgtgacaactttctctctcatactcacattattttttactttatctc 28458364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 30170063 - 30170007
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||  |||||||| |||||    
T  30170063 tgacaacttttgtgacaactttctctctcatactcacattattttttactttatctc 30170007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 53152360 - 53152308
Alignment:
Q  277 aacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||| ||||||||||||| ||| ||||  |||||||| |||||    
T  53152360 aacttttgcaacaattttttctctcatattcatattattttttactttatctc 53152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 7592876 - 7592933
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||    
T  7592876 gtgacaacttttgcaacaactttatctctcatagtcacattattttttactttatctc 7592933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 16872231 - 16872143
Alignment:
Q  247 ttatgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||| ||||||||||||||||||      ||||||||||||||||||||||| ||| ||||| ||||||||| |||||||| |||||    
T  16872231 ttatgagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctatcatactcacattactttttactttatctc 16872143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 30136058 - 30136002
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  30136058 tgacaacttttgcaacaactttctctctcatattcacattactttttactttatctc 30136002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 7956049 - 7955994
Alignment:
Q  274 gacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  7956049 gacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 7955994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 1633958 - 1633877
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  1633958 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctc 1633877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 11658044 - 11657987
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||| || |||||    
T  11658044 gtgacaacttttgcaacaactttctctctcatactcacattactttttattttatctc 11657987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 16613630 - 16613718
Alignment:
Q  247 ttatgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||| ||||||||||||||||||      ||||||| |||||| |||||||||||||||||| ||||||||  |||||||| |||||    
T  16613630 ttatgagaaatgatatttgaacatctattttgtgacaatttttgctacaactttttctctcatactcacattattttttactttatctc 16613718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 37784015 - 37783958
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||| |||||||| |||||    
T  37784015 gtgacaacttttgcaacaactttctctctcatactcagattactttttactttatctc 37783958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 11017833 - 11017889
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  11017833 tgacaacttttgcaacaactttctctctcatactcacattattttttactttatctc 11017889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 40739955 - 40739899
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||| ||||||||||||| ||||||||  |||||||| |||||    
T  40739955 tgacaacttttgcaacaattttttctctcatattcacattattttttactttatctc 40739899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 16327194 - 16327139
Alignment:
Q  274 gacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||| |||||||| ||||||||| ||||||||| |||||||| |||||    
T  16327194 gacaacttttgcgacaactttctctctcatactcacattactttttactttatctc 16327139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 16966788 - 16966853
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||    
T  16966788 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacatta 16966853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 34018836 - 34018886
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttactt 323  Q
    |||||||||||||||||| ||| ||||||||| ||||||||| ||||||||    
T  34018836 tgacaacttttgcaacaattttctctctcatactcacattactttttactt 34018886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 33589274 - 33589217
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||  |||||||| |||||    
T  33589274 gtgacaacttttgcaacaattttctctctcatactcacattattttttactttatctc 33589217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 34718111 - 34718199
Alignment:
Q  247 ttatgacaaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||| ||||||||||||||||||      |||||||||||||  |||||||| ||||||||| ||||||||  |||||||| |||||    
T  34718111 ttatgagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctcatactcacattattttttactttatctc 34718199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 4658306 - 4658250
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||||||||||||| | ||||||| |||||||| |||||    
T  4658306 tgacaacttttgtgacaactttttctctcatacttacattactttttactttatctc 4658250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 2731004 - 2730958
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattacctttt 319  Q
    |||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  2731004 tgacaacttttgtaacaactttctctctcatattcacattatctttt 2730958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 36110141 - 36110222
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||| ||| ||| ||||| ||||||||| |||||||| |||||    
T  36110141 aaatgatatttgaacatccatttagtgaaaacttttgcaacaattttctctttcatactcacattactttttactttatctc 36110222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 41520971 - 41521052
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||| ||| ||||||||| ||||||||  |||||||| |||||    
T  41520971 aaatgatatttgaacatccatttagtgataacttttgcaacaattttctctctcatactcacattattttttactttatctc 41521052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 32847731 - 32847690
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||    
T  32847731 gtgacaacttttgcaacaactttctctcttatactcacatta 32847690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 34490201 - 34490160
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||    
T  34490201 gtgacaacttttgcaacaactttctctcttatactcacatta 34490160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 12707177 - 12707233
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||| |||||||| ||||||||| |||| |||| ||||| || |||||    
T  12707177 tgacaacttttgcgacaactttctctctcatactcacgttactttttaatttatctc 12707233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 37449467 - 37449423
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattacctttt 319  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||    
T  37449467 acaacttttgtgacaactttttctctcatactcacattatctttt 37449423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 21064270 - 21064213
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  21064270 gtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctc 21064213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 4431004 - 4430923
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||||||||||||| |||||| |  |||||||| |||||    
T  4431004 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttttctctcatactcacatcattttttactttatctc 4430923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 35099073 - 35098992
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  35099073 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctc 35098992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 43441768 - 43441822
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  43441768 acaacttttgcaacaactttctctctcatactcacattactttttactttatctc 43441822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 5042251 - 5042332
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||| ||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  5042251 aaatgatatttgaacatccatttagtgacaatttttgcaacaactttatctctcatactcacattattttttactttatctc 5042332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 8267888 - 8267807
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||| ||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  8267888 aaatgatatttgaacatccatttagtgacaatttttgcaacaactttctctctcatactcacattattttttactttatctc 8267807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 8675501 - 8675420
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||    
T  8675501 aaatgatatttgaacatccattttgtgataacttttgcaacaattttctctctcatactcacattactttttactttatctc 8675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 18842389 - 18842308
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  18842389 aaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacattattttttactttatctc 18842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 2689045 - 2688973
Alignment:
Q  254 aaatgatatttgaacatcgtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||   ||||||||||||||||||||| ||| ||||| | ||||||  |||||||| |||||    
T  2689045 aaatgatatttgaacat---gacaacttttgcaacaactttctctttcatatttacattattttttactttatctc 2688973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 15267811 - 15267868
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||  |||||||| |||||    
T  15267811 gtgacaacttttgcaacaactttctctctcatattcatattattttttactttatctc 15267868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 6517740 - 6517796
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  6517740 tgacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 6517796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 16437607 - 16437568
Alignment:
Q  274 gacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  16437607 gacaacttttgcaacaactttctctctcatactcacatta 16437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 9977122 - 9977203
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||| ||| ||  ||||| ||||||||| |||||||| |||||    
T  9977122 aaatgatatttgaacatccatttagtgacaacttttgcaacaattttctcaatcatactcacattactttttactttatctc 9977203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 5821656 - 5821599
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||| ||||||||||| ||||||||||||| | ||||||  |||||||| |||||    
T  5821656 gtgacaatttttgcaacaattttttctctcatacttacattattttttactttatctc 5821599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 6446560 - 6446511
Alignment:
Q  274 gacaacttttgcaacaactttttctctcatagtcacattaccttttactt 323  Q
    |||||||||||  |||||||| ||||||||| ||||||||| ||||||||    
T  6446560 gacaacttttgtgacaactttctctctcatactcacattactttttactt 6446511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 6931103 - 6931046
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||| |||||||||||||||||| ||| ||||| ||||||||  |||||||| |||||    
T  6931103 gtgataacttttgcaacaactttatctttcatactcacattattttttactttatctc 6931046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 33620635 - 33620692
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||| ||||||||||||| | | ||||  |||||||| |||||    
T  33620635 gtgacaacttttgcaacaattttttctctcatacttatattattttttactttatctc 33620692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 10649463 - 10649519
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||| ||||| ||||||||| |||||||| |||||    
T  10649463 tgacaacttttgtgacaactttctctttcatactcacattactttttactttatctc 10649519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 20770159 - 20770215
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||  |||||||| |||||    
T  20770159 tgacaacttttgtgacaactttctctctcatactcacattattttttactttatctc 20770215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 2227 - 2281
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||| |||||    
T  2227 acaacttttgcaacaactttatctctcatagtcacattattttttactttatctc 2281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 19639 - 19720
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| |||||||||  ||||||| |||||    
T  19639 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattactctttactttatctc 19720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 13347883 - 13347802
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||| ||||||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  13347883 aaatgatatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactcacattactttttactttatctc 13347802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 35589455 - 35589374
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||| ||| ||||||||| ||||||||| |||||||| |||||    
T  35589455 aaatgatatttgaacatccattttgtgacaacttttgcaacaattttctctctcatactcacattactttttactttatctc 35589374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 39213814 - 39213757
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||    
T  39213814 gtgacaacttttgcaacaactttatctctcatactcacattattttttactttatctc 39213757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 39449294 - 39449351
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||| |||||||| |||||    
T  39449294 gtgacaacttttgcaacaactttctctctcatactcagattactttttactttatctc 39449351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 18176943 - 18177008
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||||| ||||||||    
T  18176943 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacatta 18177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 36802899 - 36802980
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||||||||||||| |||||||| ||||||||| ||||||||  |||||||| |||||    
T  36802899 aaatgatatttgaacatccattttgtgacaacttttgctacaactttctctctcatactcacattattttttactttatctc 36802980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 6999111 - 6999055
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||| |||||    
T  6999111 tgacaacttttgtgacaactttctctctcatactcacattactttttactttatctc 6999055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 17779394 - 17779454
Alignment:
Q  254 aaatgatatttgaacatc-gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    |||| ||||||||||||  ||||||| ||||||||||||||||||||||||| | ||||||    
T  17779394 aaataatatttgaacattagtgacaatttttgcaacaactttttctctcatacttacatta 17779454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 29684656 - 29684600
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatct 328  Q
    ||||||| ||||||||||||||| ||||||||| |||| |||| |||||||| ||||    
T  29684656 gtgacaatttttgcaacaactttctctctcatactcaccttactttttactttatct 29684600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 37257452 - 37257534
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctca-tagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      ||||||||||||||||||||||| ||||||| || ||||||||  |||||||| |||||    
T  37257452 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcattactcacattattttttactttatctc 37257534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 9634465 - 9634423
Alignment:
Q  287 acaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||||||||| ||||||||| |||||||| |||||    
T  9634465 acaactttttctctcatactcacattactttttactttatctc 9634423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 12889876 - 12889835
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    |||||||||||||| |||||||| ||||||||| ||||||||    
T  12889876 gtgacaacttttgctacaactttctctctcatactcacatta 12889835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 16677699 - 16677756
Alignment:
Q  272 gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||| ||| ||| | ||| ||||||||| |||||||| |||||    
T  16677699 gtgacaacttttgcaacaattttctcttttatattcacattactttttactttatctc 16677756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 4758706 - 4758642
Alignment:
Q  254 aaatgatatttgaacatc-----gtgacaacttttgcaacaactttttctctcatagtcacatta 313  Q
    ||||||||||||||||||     |||| |||||||||||||||||| ||| ||||| ||||||||    
T  4758706 aaatgatatttgaacatcatttagtgataacttttgcaacaactttctctttcatattcacatta 4758642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 6170658 - 6170714
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||  |||||||| ||||||||| |||| |||| |||||||| |||||    
T  6170658 tgacaacttttgtgacaactttctctctcatactcacgttactttttactttatctc 6170714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 41042283 - 41042327
Alignment:
Q  275 acaacttttgcaacaactttttctctcatagtcacattacctttt 319  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||    
T  41042283 acaacttttgtgacaactttttctctcatactcacattatctttt 41042327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 8242 - 8292
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttactt 323  Q
    |||||||||||||||||||||| ||||||||| ||| ||||| ||||||||    
T  8242 tgacaacttttgcaacaactttctctctcatattcatattactttttactt 8292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 10 - 91
Alignment:
Q  254 aaatgatatttgaacatc------gtgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    ||||||||||||||||||      |||| |||||||||||||| ||| ||| ||||| ||||||||| |||||||| |||||    
T  10 aaatgatatttgaacatccatttagtgaaaacttttgcaacaattttctctttcatactcacattactttttactttatctc 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 9231 - 9287
Alignment:
Q  273 tgacaacttttgcaacaactttttctctcatagtcacattaccttttacttcatctc 329  Q
    |||||||||||| ||||||||| ||||| ||| ||| ||||| |||||||| |||||    
T  9231 tgacaacttttgaaacaactttctctcttatactcatattactttttactttatctc 9287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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