View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19575_low_22 (Length: 242)

Name: NF19575_low_22
Description: NF19575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19575_low_22
NF19575_low_22
[»] chr8 (17 HSPs)
chr8 (57-242)||(23402090-23402275)
chr8 (61-242)||(4403994-4404175)
chr8 (62-242)||(34136825-34137005)
chr8 (55-242)||(16788025-16788212)
chr8 (57-242)||(29728386-29728571)
chr8 (57-242)||(36408533-36408718)
chr8 (57-242)||(3648794-3648979)
chr8 (97-229)||(9877242-9877374)
chr8 (53-239)||(15838264-15838449)
chr8 (57-242)||(2729196-2729381)
chr8 (76-242)||(39914516-39914681)
chr8 (107-242)||(42230971-42231104)
chr8 (91-201)||(3435285-3435397)
chr8 (1-53)||(14191302-14191356)
chr8 (98-168)||(40470567-40470637)
chr8 (208-242)||(40470475-40470509)
chr8 (149-209)||(376458-376519)
[»] chr5 (22 HSPs)
chr5 (57-242)||(17332551-17332736)
chr5 (57-242)||(31680349-31680534)
chr5 (58-242)||(37254624-37254808)
chr5 (57-242)||(12278860-12279045)
chr5 (57-242)||(31501716-31501901)
chr5 (89-242)||(33430335-33430488)
chr5 (57-239)||(10033909-10034091)
chr5 (57-242)||(13817959-13818144)
chr5 (75-239)||(39657509-39657673)
chr5 (97-242)||(16155019-16155164)
chr5 (57-242)||(36291353-36291538)
chr5 (58-242)||(36293621-36293805)
chr5 (58-242)||(39434679-39434863)
chr5 (105-239)||(16333879-16334013)
chr5 (77-241)||(1776377-1776541)
chr5 (54-242)||(19985918-19986106)
chr5 (58-242)||(26283318-26283502)
chr5 (97-242)||(43068899-43069044)
chr5 (75-226)||(3155647-3155798)
chr5 (88-201)||(28801300-28801415)
chr5 (55-160)||(202619-202724)
chr5 (57-105)||(26543902-26543950)
[»] chr3 (20 HSPs)
chr3 (58-242)||(11018212-11018396)
chr3 (58-242)||(45182964-45183148)
chr3 (57-242)||(6930894-6931079)
chr3 (57-242)||(33040935-33041120)
chr3 (58-242)||(6503569-6503753)
chr3 (62-242)||(27935165-27935345)
chr3 (57-226)||(19565517-19565686)
chr3 (58-242)||(39771773-39771957)
chr3 (58-242)||(35514249-35514429)
chr3 (76-241)||(6269427-6269592)
chr3 (57-242)||(45335857-45336041)
chr3 (75-242)||(19390146-19390313)
chr3 (75-242)||(34084122-34084289)
chr3 (76-242)||(22968444-22968610)
chr3 (88-242)||(40081741-40081893)
chr3 (94-201)||(5135288-5135397)
chr3 (194-242)||(22922214-22922262)
chr3 (57-111)||(6890980-6891034)
chr3 (55-105)||(5354689-5354739)
chr3 (208-242)||(5135421-5135455)
[»] chr4 (42 HSPs)
chr4 (57-242)||(30216742-30216927)
chr4 (58-242)||(43143584-43143768)
chr4 (57-242)||(3292896-3293081)
chr4 (57-242)||(6690235-6690420)
chr4 (57-240)||(50205079-50205262)
chr4 (61-230)||(42333788-42333957)
chr4 (57-242)||(10352884-10353069)
chr4 (58-242)||(48989311-48989495)
chr4 (92-242)||(44156668-44156818)
chr4 (58-242)||(25930691-25930875)
chr4 (58-242)||(20129293-20129477)
chr4 (52-242)||(28877250-28877440)
chr4 (58-242)||(26439279-26439463)
chr4 (58-242)||(34407284-34407468)
chr4 (99-242)||(35545977-35546120)
chr4 (78-239)||(29319708-29319869)
chr4 (58-242)||(29995983-29996167)
chr4 (75-242)||(36382346-36382512)
chr4 (58-242)||(43355887-43356071)
chr4 (57-242)||(17511233-17511418)
chr4 (58-242)||(13012171-13012355)
chr4 (58-242)||(47500756-47500940)
chr4 (57-242)||(26448035-26448219)
chr4 (57-242)||(30077631-30077815)
chr4 (130-242)||(6235575-6235687)
chr4 (113-242)||(1817755-1817884)
chr4 (99-239)||(40529039-40529179)
chr4 (64-201)||(30109945-30110084)
chr4 (57-230)||(13392893-13393055)
chr4 (57-230)||(13396032-13396194)
chr4 (87-201)||(48129978-48130087)
chr4 (57-160)||(27363343-27363446)
chr4 (58-116)||(7769311-7769369)
chr4 (57-111)||(49908783-49908837)
chr4 (100-168)||(6254569-6254637)
chr4 (56-112)||(17554977-17555033)
chr4 (57-112)||(6212028-6212083)
chr4 (57-111)||(5517495-5517549)
chr4 (58-175)||(45194159-45194276)
chr4 (208-242)||(30110108-30110142)
chr4 (208-242)||(48130111-48130145)
chr4 (59-111)||(50720477-50720529)
[»] chr2 (23 HSPs)
chr2 (57-241)||(8147333-8147518)
chr2 (57-242)||(45418565-45418750)
chr2 (57-242)||(44084603-44084788)
chr2 (57-241)||(770976-771165)
chr2 (58-239)||(8059336-8059517)
chr2 (75-242)||(31581622-31581789)
chr2 (100-242)||(12756837-12756979)
chr2 (58-239)||(42439969-42440150)
chr2 (78-242)||(41251634-41251798)
chr2 (58-239)||(35962698-35962879)
chr2 (75-239)||(32127144-32127308)
chr2 (58-242)||(17445041-17445223)
chr2 (58-242)||(6403804-6403988)
chr2 (78-239)||(16405603-16405764)
chr2 (81-239)||(18981622-18981780)
chr2 (58-212)||(2958131-2958284)
chr2 (95-239)||(2285882-2286026)
chr2 (128-242)||(26162702-26162813)
chr2 (73-189)||(26237955-26238071)
chr2 (99-201)||(4555250-4555354)
chr2 (87-201)||(7072589-7072707)
chr2 (57-105)||(34523222-34523270)
chr2 (97-154)||(34905971-34906028)
[»] chr6 (12 HSPs)
chr6 (57-242)||(28996712-28996897)
chr6 (75-242)||(18339106-18339273)
chr6 (58-239)||(34948761-34948942)
chr6 (57-242)||(29743265-29743450)
chr6 (58-239)||(13837804-13837985)
chr6 (58-242)||(398600-398784)
chr6 (91-242)||(33229336-33229487)
chr6 (59-160)||(24697899-24698000)
chr6 (61-171)||(31028435-31028545)
chr6 (57-112)||(13646999-13647054)
chr6 (57-112)||(34385518-34385573)
chr6 (59-160)||(24695472-24695572)
[»] chr7 (20 HSPs)
chr7 (58-242)||(34389056-34389240)
chr7 (57-242)||(26624727-26624913)
chr7 (57-242)||(37002144-37002329)
chr7 (57-240)||(8867733-8867916)
chr7 (57-242)||(43184468-43184653)
chr7 (87-242)||(35090180-35090335)
chr7 (78-239)||(3114099-3114260)
chr7 (57-242)||(33685546-33685731)
chr7 (99-242)||(36658205-36658348)
chr7 (98-241)||(38638237-38638380)
chr7 (58-239)||(5555470-5555651)
chr7 (57-242)||(7002707-7002892)
chr7 (57-242)||(7048578-7048763)
chr7 (75-242)||(36630816-36630983)
chr7 (97-242)||(40920003-40920148)
chr7 (76-240)||(14777109-14777273)
chr7 (75-242)||(8394125-8394292)
chr7 (134-201)||(10868514-10868583)
chr7 (62-165)||(26502797-26502899)
chr7 (62-165)||(26589815-26589917)
[»] chr1 (15 HSPs)
chr1 (58-242)||(35907535-35907719)
chr1 (57-241)||(17445295-17445479)
chr1 (58-242)||(3828967-3829150)
chr1 (58-242)||(321377-321561)
chr1 (57-242)||(42310941-42311126)
chr1 (75-242)||(32982056-32982223)
chr1 (58-239)||(7433428-7433609)
chr1 (58-242)||(26144238-26144422)
chr1 (57-201)||(41972314-41972459)
chr1 (57-201)||(33489669-33489815)
chr1 (57-112)||(44352613-44352668)
chr1 (57-111)||(31866959-31867013)
chr1 (58-181)||(23313221-23313345)
chr1 (208-242)||(33489839-33489873)
chr1 (208-242)||(41972256-41972290)
[»] scaffold0502 (1 HSPs)
scaffold0502 (75-242)||(5230-5397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (57-242)||(31462-31647)
[»] scaffold0041 (1 HSPs)
scaffold0041 (97-242)||(52947-53092)
[»] scaffold0069 (1 HSPs)
scaffold0069 (58-242)||(17825-18009)
[»] scaffold0002 (1 HSPs)
scaffold0002 (58-242)||(480457-480641)
[»] scaffold2142 (1 HSPs)
scaffold2142 (58-242)||(505-689)
[»] scaffold0769 (1 HSPs)
scaffold0769 (56-105)||(1258-1307)


Alignment Details
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 23402090 - 23402275
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23402090 ggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttaca 23402189  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  23402190 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 4403994 - 4404175
Alignment:
Q  61 cggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaa 160  Q
    ||||||||| | ||||||||||| | ||||||||| ||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  4403994 cggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaa 4404093  T
Q  161 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  4404094 gaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 62 - 242
Target Start/End: Complemental strand, 34137005 - 34136825
Alignment:
Q  62 ggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaag 161  Q
    |||||||||||| ||||||||||  ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||| ||||||||| ||||||||||||    
T  34137005 ggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaag 34136906  T
Q  162 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||    
T  34136905 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 55 - 242
Target Start/End: Complemental strand, 16788212 - 16788025
Alignment:
Q  55 cgggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatactta 154  Q
    ||||| ||||||||  | ||||| ||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||    
T  16788212 cggggacggtttcattgcccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 16788113  T
Q  155 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  16788112 caaaaagaaaaatttgggcaatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 29728571 - 29728386
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||||||||  |||||  |||||||||||||||||||||  |||||||||||||  |||||| ||||||| ||||||||||||  ||||||| | |||||    
T  29728571 ggggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttaca 29728472  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  29728471 aaaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 36408533 - 36408718
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||||| |||||| |||||| |||||||||||| | ||||||| | |||||    
T  36408533 ggggtggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttaca 36408632  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||| ||| |||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  36408633 aaaagaaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 3648979 - 3648794
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||||||||  |||||  ||||| || |||| ||||||| ||||||||||||||| ||| || ||||||| ||||||||||||| ||||||| | |||||    
T  3648979 ggggcggttctaccgtatggcgatccgggacagtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttaca 3648880  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||||| | ||||||||||||| |||||||||||||||||||||||    
T  3648879 aaaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  97 ggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 196  Q
    |||||||| |||||| |||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  197 ataggtctcggaattttatttaacacactattg 229  Q
    |||||||||| ||||||||||| ||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 15838264 - 15838449
Alignment:
Q  53 ggcgggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatact 152  Q
    ||||| |||||||  |||||  ||||||||||| ||||| ||| |||||||| |||||| |||||| |||| || ||||| ||||| | ||||||| | |    
T  15838264 ggcggtggcggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatt 15838363  T
Q  153 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  15838364 tacaaaa-gaaaaatttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 2729381 - 2729196
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||| ||| || |||| | |||| ||||||||| ||||||| ||||| |    
T  2729381 ggggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttata 2729282  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||  ||| |||||| |||||| ||||| |||||||||||||||  ||||||||||| ||||||||||| || ||||||||    
T  2729281 aaaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 76 - 242
Target Start/End: Original strand, 39914516 - 39914681
Alignment:
Q  76 gcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaa 175  Q
    |||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||  ||||||| | ||| ||||| ||||||||||||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaa 39914614  T
Q  176 tctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    | |||||||| ||||| | |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  39914615 tttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctc 39914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  107 ataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcg 206  Q
    ||||| |||||| |||| | ||||| |||||| | |||||||  |||||||||||||||||||||||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaaca--cttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  207 gaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||| |||||||||||||| ||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  91 cgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggc--aatctgaaaattctc 188  Q
    ||||| |||| |||||||||| |||||| |||||||||||||||||| || ||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  189 acacgcaaatagg 201  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14191356 - 14191302
Alignment:
Q  1 cgaaggaaatgaaaa--ttaagtagatagacgcattatcgcatacagaggaattg 53  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  14191356 cgaaggaaatgaaaaaattaagtagatagacgcattatcgcatacagaggaattg 14191302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  98 gctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatt 168  Q
    |||||||||||||| |||||| |||||||||||  |||||| | ||||||| ||||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  208 aattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 376458 - 376519
Alignment:
Q  149 tacttacaaaaagaaaaatt-tgggcaatctgaaaattctcacacgcaaataggtctcggaa 209  Q
    |||||| ||||| ||||||| || | ||| |||||||||||||||||||| |||||||||||    
T  376458 tacttaaaaaaaaaaaaattgtgcgaaatatgaaaattctcacacgcaaagaggtctcggaa 376519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 17332736 - 17332551
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  17332736 ggggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttaca 17332637  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  17332636 aaaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 31680349 - 31680534
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||| |  ||||||||||||||||||||||||||||| |||||||    
T  31680349 ggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttaca 31680448  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31680449 aaaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 37254624 - 37254808
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||||||||  |||||||||| | ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  37254624 gggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaa 37254723  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  37254724 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 12279045 - 12278860
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||| ||||| ||||||||| | ||||||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||    
T  12279045 ggggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttaca 12278946  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  12278945 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 31501901 - 31501716
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| || | |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||    
T  31501901 ggggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttaca 31501802  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| | |||||||||    
T  31501801 aaaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 89 - 242
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  89 gtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctc 188  Q
    ||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  189 acacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 10033909 - 10034091
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||||||||  |||||  |||||||||||||| |||||| ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | |||||    
T  10033909 ggggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttaca 10034008  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10034009 aaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 13817959 - 13818144
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||||||||  |||||  ||||||||||| ||||||| | ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | |||||    
T  13817959 ggggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttaca 13818058  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||    
T  13818059 aaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 39657673 - 39657509
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||| ||||||||  | |||||||| |||||| |||||| ||||||| ||||||||||||  ||||||| | |||||||||||||||||||||||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 39657574  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  39657573 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 16155019 - 16155164
Alignment:
Q  97 ggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 196  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | ||| |||||||||||||| ||||||||||||||| ||||||||||    
T  16155019 ggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacacgcaa 16155118  T
Q  197 ataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||| ||||||||||||| |||||||||||| | ||||||||    
T  16155119 ataggtcttggaattttatttagcacactattgacagattcatctc 16155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 36291353 - 36291538
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||| |||| |||| |||||| || || |||||| ||||| |||||| |||||| | |||| |||||   ||||||| | |||||    
T  36291353 ggggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttaca 36291452  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||| |||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36291453 aaaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 36293805 - 36293621
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||||||  |||||| || | ||||||||||||| |||| | ||||||| ||||||||||||| ||||||| | ||||||    
T  36293805 gggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaa 36293706  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| ||||||||| || | ||||||||    
T  36293705 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctc 36293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 39434679 - 39434863
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  |||||||| || ||||||||| ||||||||||||||| ||| || ||||||| ||||||||||||| ||||||| | ||||||    
T  39434679 gggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaa 39434778  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    || ||||||||||||||||||||||||| ||||| | ||||||||||  |||||||||||| |||||||||||| | ||||||||    
T  39434779 aatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctc 39434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 16334013 - 16333879
Alignment:
Q  105 cgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtct 204  Q
    ||||||| |||||| ||||||  ||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  205 cggaattttatttaacacactattgacgggttcat 239  Q
     ||||||||||||| |||||||||||||| |||||    
T  16333913 tggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 77 - 241
Target Start/End: Complemental strand, 1776541 - 1776377
Alignment:
Q  77 cgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaat 176  Q
    ||||||||| ||||||||| ||||||||||||||| |||| | |||| |  ||||| ||||| | ||||||| | |||||||||||||||||||||||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  177 ctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatct 241  Q
     |||||||| |||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 242
Target Start/End: Original strand, 19985918 - 19986106
Alignment:
Q  54 gcgggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatactt 153  Q
    ||||||| ||||| |||||  | ||||| ||| |||||| ||  |||||||||||||| |||||| ||||||  ||||||||||| | |||| || | ||    
T  19985918 gcgggggtggttttaccgtatgacgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacattt 19986017  T
Q  154 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  19986018 acaaaaagaaaaatttgggtaatctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 26283502 - 26283318
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||| ||| ||||||||| ||||||||||||||| |||||| ||||||| ||||| |||||   ||||||| | ||| ||    
T  26283502 gggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataa 26283403  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  26283402 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 43068899 - 43069044
Alignment:
Q  97 ggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 196  Q
    ||||||||| ||||| ||| || ||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||| ||| | ||    
T  43068899 ggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatgtaa 43068998  T
Q  197 ataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||| |||||||||||||||||| |||||||||| ||| ||||||||    
T  43068999 ataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 3155798 - 3155647
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||| ||||| ||||||| | ||||||||| ||||| |||||| ||| ||| ||||| ||||| | ||||||| | ||| |||||||||||||||| ||    
T  3155798 ggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggaca 3155699  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacacta 226  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||| |||||||    
T  3155698 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  88 ggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttggg--caatctgaaaatt 185  Q
    |||||||| ||||||||||||||| |||||| |||||| |||| ||||||||| ||||||| |||||||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  186 ctcacacgcaaatagg 201  Q
    ||||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 202619 - 202724
Alignment:
Q  55 cgggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatactta 154  Q
    ||||||||||||||||| ||| ||||||  |  |||||||| ||||||||||||||| | || | |||||  | |||||||||||| ||||| | ||| |    
T  202619 cgggggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaa 202718  T
Q  155 caaaaa 160  Q
    ||||||    
T  202719 caaaaa 202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 26543950 - 26543902
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatc 105  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||    
T  26543950 ggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 26543902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 8e-79; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 11018396 - 11018212
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||||    
T  11018396 gggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 11018297  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  11018296 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 45182964 - 45183148
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 6931079 - 6930894
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||  |||||| |||||||||||||||||||||| | |||||    
T  6931079 ggggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttaca 6930980  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  6930979 aaaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 33040935 - 33041120
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| ||||||| | |||||||| |||||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  33040935 ggggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttaca 33041034  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||  |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33041035 aaaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 6503753 - 6503569
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||| || |||||| ||||||| |||||||||||||||||| || ||||||||    
T  6503753 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaa 6503654  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||| |||||||||||    
T  6503653 aaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 62 - 242
Target Start/End: Original strand, 27935165 - 27935345
Alignment:
Q  62 ggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaag 161  Q
    |||||||||| | ||| |||| || | ||||||| ||||||||||||||| |||||| |||| |||||||||||||||  ||||||| ||||||||||||    
T  27935165 ggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaag 27935264  T
Q  162 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  27935265 aaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 57 - 226
Target Start/End: Complemental strand, 19565686 - 19565517
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||| ||||| ||||||||| || || ||||||||| |||||| ||||||||||||| ||||  | ||||||| | |||||    
T  19565686 ggggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttaca 19565587  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacacta 226  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  19565586 aaaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 39771773 - 39771957
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| |||||| |||||||| |||||| ||||||| ||||||||||||| ||||||| | ||| ||    
T  39771773 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataa 39771872  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||| ||||||||||||| | ||||||||    
T  39771873 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 39771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 35514249 - 35514429
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||| ||||||||| |||||||||||||||||||| || ||||||||||||||| || ||||| |||| |||||||||||| | |||||||     ||||    
T  35514249 gggcagtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaaca----cacaa 35514344  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  35514345 aaagaaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 6269592 - 6269427
Alignment:
Q  76 gcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaa 175  Q
    |||| ||||| |||||| || | ||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  6269592 gcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 6269493  T
Q  176 tctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatct 241  Q
    |||||||||| ||||||| |||||||||| ||||||||||||| |||||||||||| | |||||||    
T  6269492 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 45335857 - 45336041
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||| ||| ||||||||| | ||| ||||||||| ||| || ||||||||||||| ||||| || |||||| | |||||    
T  45335857 ggggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttaca 45335955  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| || ||| ||||||||    
T  45335956 aaaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctc 45336041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 19390146 - 19390313
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||| |||||| || || |||||||||||| |||||| ||||||| ||||| ||||| | ||||||| | |||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||| |||||||||||| | ||||||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 19390313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 75 - 242
Target Start/End: Complemental strand, 34084289 - 34084122
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||| |||| |  ||||| ||||| | ||||||| | |||||||||||||||||||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    || |||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 76 - 242
Target Start/End: Complemental strand, 22968610 - 22968444
Alignment:
Q  76 gcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaa 175  Q
    |||||||||| |||||| || ||||||||||||||| |||||| |||||||  |||||||||||| ||||||| | ||||||||||||||||||||||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 22968511  T
Q  176 tctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||| |||||| ||||||| |||||||||| | ||||||||||| |||||||||||| | ||||||||    
T  22968510 tctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 88 - 242
Target Start/End: Complemental strand, 40081893 - 40081741
Alignment:
Q  88 ggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattct 187  Q
    |||||||| ||||||||||||||| |||| | ||||||| ||||| ||||||  ||||||| | ||||||||||||||||||||||||| |||||||| |    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgt 40081795  T
Q  188 cacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||| ||| || ||||| |||| |||||||||||||||||||||||    
T  40081794 cacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 5135288 - 5135397
Alignment:
Q  94 ccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggc--aatctgaaaattctcaca 191  Q
    ||||||||||||||| || |||| | ||||||||||||| ||||||  ||||||| |||||||||||||||||||||| |  |||| |||||||||||||    
T  5135288 ccaggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcaca 5135387  T
Q  192 cgcaaatagg 201  Q
    | ||||||||    
T  5135388 cacaaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  194 caaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 6890980 - 6891034
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataat 111  Q
    ||||||||||||||| |||||||| |||| ||||||||| |||||||||||||||    
T  6890980 ggggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataat 6891034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 5354689 - 5354739
Alignment:
Q  55 cgggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatc 105  Q
    ||||||| ||||||||| ||||||||||||| ||||||||| |||||||||    
T  5354689 cgggggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatc 5354739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  208 aattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 30216927 - 30216742
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||    
T  30216927 ggggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttaca 30216828  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  30216827 aaaagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 43143768 - 43143584
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||||    
T  43143768 gggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 43143669  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  43143668 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 3293081 - 3292896
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| || | |||||||| ||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  3293081 ggggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttaca 3292982  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  3292981 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 6690420 - 6690235
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  6690420 ggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttaca 6690321  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  6690320 aaaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 50205262 - 50205079
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||    
T  50205262 ggggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttaca 50205163  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatc 240  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  50205162 aaaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 42333957 - 42333788
Alignment:
Q  61 cggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaa 160  Q
    |||||||||||||| |||| ||||| |||||| || ||||| ||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  42333957 cggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 42333858  T
Q  161 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattga 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  42333857 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 10353069 - 10352884
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||| ||||||||| |||||| ||||||||||||| ||||| | ||||||| | |||||    
T  10353069 ggggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttaca 10352970  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | || ||| ||||||||    
T  10352969 aaaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctc 10352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 48989311 - 48989495
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||| ||||||||| ||| |||| |||| |||||  || || |||||||||||| |||||| |||| ||||||| |||||| | ||||||| ||||||||    
T  48989311 gggcagtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaa 48989410  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48989411 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  92 gcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcaca 191  Q
    |||| ||||| | ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  192 cgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 25930691 - 25930875
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  |||||||| || ||||||||| ||||||||| ||||| |||||| |||| || ||||||||||||| ||||||| | ||||||    
T  25930691 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaa 25930790  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  25930791 aaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 20129293 - 20129477
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | ||||||    
T  20129293 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 20129392  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||  |||||||||||| | ||||||||    
T  20129393 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc 20129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 242
Target Start/End: Complemental strand, 28877440 - 28877250
Alignment:
Q  52 tggcgggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatac 151  Q
    |||| |||||||||||||||||||  |||||||  |||||||   |||| |||||||||| |||||| ||||||  ||||| |||||| ||||||||  |    
T  28877440 tggcaggggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgc 28877341  T
Q  152 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  28877340 ttataaaaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 26439463 - 26439279
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| |||||| |||||||| |||||| ||||||| ||||||||||||| ||||||| | ||| ||    
T  26439463 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataa 26439364  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||| ||||||||||||| | ||||||||    
T  26439363 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 26439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 34407468 - 34407284
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| |||||| |||||||| |||||| ||||||| ||||||||||||| ||||||| | ||| ||    
T  34407468 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataa 34407369  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||| ||||||||||||| | ||||||||    
T  34407368 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 34407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  99 ctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 198  Q
    ||||||||| ||| |||||  || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  199 aggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
     |||||| |||||||||||| ||||||||||| |||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 78 - 239
Target Start/End: Complemental strand, 29319869 - 29319708
Alignment:
Q  78 gaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatc 177  Q
    |||||| | |||||| |||||||||||||||||| |||||| ||||||| |||||||||| || ||||||| | ||||||||||||||||||| ||||||    
T  29319869 gacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatc 29319770  T
Q  178 tgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||| |||||| |||||| |||| ||||||||||||| ||||||||||||||||||||    
T  29319769 tgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 29996167 - 29995983
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||||||||| ||| ||| |||||||||||| || | ||||||||||||| |||| | ||||||| ||||| ||||| | ||||||| | |||| |    
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| | |||||||||||||| ||||||||    
T  29996067 aaagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 75 - 242
Target Start/End: Complemental strand, 36382512 - 36382346
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||| ||||||||| ||||||||| ||||| |||||| |||| || ||||| ||||| | ||||||| | |||||||| ||||||||||| ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 43355887 - 43356071
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||| | | ||||||| |||||| |||||||| |||||| ||||||| ||||||||||||| ||||||| | ||| ||    
T  43355887 gggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataa 43355986  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||| ||||||||||||| | ||||||||    
T  43355987 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 43356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 17511418 - 17511233
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||||||||  |||||  |||||||| || ||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | |||||    
T  17511418 ggggcggttctaccgtatggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttaca 17511320  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgg-aattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||| || ||||||||||| |||| ||||||  ||||||||||    
T  17511319 aaaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 13012171 - 13012355
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| ||||||||||||||| |||||| ||||||  ||||| ||||||  ||||||| | ||| ||    
T  13012171 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataa 13012270  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  13012271 aaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 13012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 47500756 - 47500940
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||  ||||||| | |||  |    
T  47500756 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatga 47500855  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  47500856 aaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 47500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 26448035 - 26448219
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| |||||||| |||  || ||| || | ||||||||||||| |||||| |||| | | |||||||||| | ||||||| |||||||    
T  26448035 ggggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttaca 26448134  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||| |||||||||| ||| || |||||    
T  26448135 aaaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattggcggatttatctc 26448219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 30077815 - 30077631
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||| ||||| ||| ||||||||||||||| ||||||||  |||||| ||||||||||||| |||||   ||||||| | |||||    
T  30077815 ggggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttaca 30077717  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||| ||||||||||||| | |||| ||||||||||| | ||||||||||| ||||||| || ||| ||||||||    
T  30077716 aaaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctc 30077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 6235575 - 6235687
Alignment:
Q  130 acccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattg 229  Q
    ||||||||| | ||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  230 acgggttcatctc 242  Q
    |||||||||||||    
T  6235675 acgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 242
Target Start/End: Original strand, 1817755 - 1817884
Alignment:
Q  113 tttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattt 212  Q
    |||||| |||||| |||| ||||||| | ||||| | | ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  1817755 tttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaattt 1817854  T
Q  213 tatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||| ||| ||||||||    
T  1817855 tatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 40529039 - 40529179
Alignment:
Q  99 ctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 198  Q
    ||||||||||||| |||||| |||| || ||||| |||| |  ||||||| | |||||||||||||||||||| |||| |||||||| ||||| ||||||    
T  40529039 ctcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttggacaatttgaaaattgtcacatgcaaat 40529138  T
Q  199 aggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  40529139 aggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  64 tttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaa 163  Q
    |||||||| ||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||| || |||| | ||||||| ||||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  164 aaatttgggc--aatctgaaaattctcacacgcaaatagg 201  Q
    |||||||| |  ||| |||||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 230
Target Start/End: Complemental strand, 13393055 - 13392893
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| || |||||||||||||||||||| ||||| |||||| |  ||||||||||| | |||||| |||      ||    ||  ||||    
T  13393055 ggggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaacctaaa------ttg---ta--taca 13392967  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattga 230  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  13392966 aaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 230
Target Start/End: Complemental strand, 13396194 - 13396032
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| || |||||||||||||||||||| ||||| |||||| |  ||||||||||| | |||||| |||      ||    ||  ||||    
T  13396194 ggggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaacctaaa------ttg---ta--taca 13396106  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattga 230  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  13396105 aaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 48129978 - 48130087
Alignment:
Q  87 cggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattc 186  Q
    |||||| || ||||||||||||||| |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||     |||||| ||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg-----tgaaaactc 48130072  T
Q  187 tcacacgcaaatagg 201  Q
    |||||||||||||||    
T  48130073 tcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 27363343 - 27363446
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||||||||| |||||  ||||||| ||| ||||||||| |||||||||||   | |||||||||||| ||||||||||||||| ||||||| |||||||    
T  27363343 ggggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttaca 27363442  T
Q  157 aaaa 160  Q
    ||||    
T  27363443 aaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 7769311 - 7769369
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttg 116  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||| ||||    
T  7769311 gggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 49908837 - 49908783
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataat 111  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  49908837 ggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataat 49908783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  100 tcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatt 168  Q
    |||||||||||| |||||| |||| |||||||||||||| ||||||||| |||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 17554977 - 17555033
Alignment:
Q  56 gggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatc 112  Q
    |||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||    
T  17554977 gggggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataatc 17555033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 6212083 - 6212028
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatc 112  Q
    ||||||||||||||||||||||||| ||| |||||||||  |||||||||||||||    
T  6212083 ggggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataatc 6212028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 5517549 - 5517495
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataat 111  Q
    ||||||||||||||| ||||||||||||| ||||||||  |||||||||||||||    
T  5517549 ggggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataat 5517495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 45194159 - 45194276
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||| ||||||||| ||| ||||||| | || | |||| | ||||||| ||||| |||||| |||| || ||||||||||| | ||||||| ||||||||    
T  45194159 gggcagtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaa 45194258  T
Q  158 aaagaaaaatttgggcaa 175  Q
    ||| ||||  ||||||||    
T  45194259 aaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  208 aattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  208 aattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 50720529 - 50720477
Alignment:
Q  59 ggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataat 111  Q
    ||||||||||||| ||||||||| ||| ||||||||| ||||| ||| |||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctcaatcaataat 50720477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 5e-77; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 57 - 241
Target Start/End: Original strand, 8147333 - 8147518
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||    
T  8147333 ggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttaca 8147432  T
Q  157 aaaagaaaaatttgggcaatctg-aaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatct 241  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8147433 aaaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 45418565 - 45418750
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||  |||||| |||||||||||||||||||||| |||||||    
T  45418565 ggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttaca 45418664  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  45418665 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 44084788 - 44084603
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||| |||||| |||| |||||| |||||||   ||||||| |||||||    
T  44084788 ggggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttaca 44084689  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  44084688 aaaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 57 - 241
Target Start/End: Original strand, 770976 - 771165
Alignment:
Q  57 ggggcggtttcaccgtccggcgacc-----ccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatac 151  Q
    ||||||||||||||| |||||||||     |||| ||||||||| ||||||||||||||  |||||| ||||||||||||| ||||||| ||||||| ||    
T  770976 ggggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacac 771075  T
Q  152 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatct 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  771076 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 8059517 - 8059336
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||||||||| ||| ||||||||| || |||||||||||| ||||||||| |||||| ||||||  ||||||||||||||||||||| ||||||||    
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaa 8059418  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||    
T  8059417 aaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 75 - 242
Target Start/End: Complemental strand, 31581789 - 31581622
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||| ||| ||||||||||||||||| ||||| | |||||||||||||| || |||||||||| ||||||| | |||||||||||||||||||||||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 100 - 242
Target Start/End: Complemental strand, 12756979 - 12756837
Alignment:
Q  100 tcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaata 199  Q
    |||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12756979 tcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaata 12756880  T
Q  200 ggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
     |||||||||||||||||| |||||||||||||||||||||||    
T  12756879 agtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 42439969 - 42440150
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||||||| ||||||||| ||||||||||||||| |||||| |||||||  |||||||||||| ||||||| | ||||||    
T  42439969 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaa 42440068  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||| |||||    
T  42440069 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 78 - 242
Target Start/End: Complemental strand, 41251798 - 41251634
Alignment:
Q  78 gaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatc 177  Q
    |||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  178 tgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||| ||||||| |||||||||| ||||||||||||| |||||||||||| | ||||||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 41251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 35962698 - 35962879
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||||| | |||||| || ||||||||||||||| |||||| ||||||| ||||||||||||  ||||||| | ||||||    
T  35962698 gggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaa 35962797  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  35962798 aaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 32127308 - 32127144
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||| ||||||||| ||||||||| ||||| |||||| |||| || | ||||||||||  ||||||| | |||||||||||||||||| ||||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggca 32127209  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  32127208 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 17445223 - 17445041
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||| ||| |||||||||  |||||||||||||| ||||||   ||||| ||||||||||||| ||||||| | ||||||    
T  17445223 gggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaa 17445126  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||||||||| | ||||||||    
T  17445125 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 17445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 6403988 - 6403804
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||| |||||   ||||||| | ||| ||    
T  6403988 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataa 6403889  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  6403888 aaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 6403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 16405603 - 16405764
Alignment:
Q  78 gaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatc 177  Q
    ||||| || ||||||||| ||||| ||||||||| ||||||  |||||| ||||||||||||  ||||||| | ||| |||||||||||||||| |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  178 tgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 18981622 - 18981780
Alignment:
Q  81 cccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctga 180  Q
    ||||| |||||| || |||||||| |||||| |||||| ||||||| ||||||||||| | ||||| | | ||||||||||||||||||||||||| | |    
T  18981622 cccgggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaa 18981721  T
Q  181 aaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  18981722 aaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 212
Target Start/End: Complemental strand, 2958284 - 2958131
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||||||| |||||| || ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | ||||||    
T  2958284 gggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataat-tttgcacattagactcaacccaaaagcccattaacacatttacaa 2958186  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattt 212  Q
    | ||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  2958185 agagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 2285882 - 2286026
Alignment:
Q  95 caggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 194  Q
    |||| |||||||||||| |||||| |||| | |||||| ||||| | ||||||| | |||| ||| |||||||||| |||||||||||||| ||||||||    
T  2285882 caggttcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgc 2285981  T
Q  195 aaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||| | ||||||||||||| ||||||||||||| ||||||    
T  2285982 aaataggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 26162813 - 26162702
Alignment:
Q  128 caacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactat 227  Q
    |||||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||   ||||||| |||| |||    
T  26162813 caacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacacaaataggtctcgga---ttatttagcacattat 26162717  T
Q  228 tgacgggttcatctc 242  Q
    |||||||||||||||    
T  26162716 tgacgggttcatctc 26162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 26237955 - 26238071
Alignment:
Q  73 ccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttggg 172  Q
    ||||||||||||| ||||||||| ||||||||||||| | |||||| ||||||  ||| ||||||| | ||||||| |||||||||||||||||||||||    
T  26237955 ccggcgaccccgggcggtcgcccgggctcgatcgatatt-tttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttggg 26238053  T
Q  173 c-aatctgaaaattctca 189  Q
    | |||||||||| |||||    
T  26238054 caaatctgaaaactctca 26238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 4555354 - 4555250
Alignment:
Q  99 ctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaa 196  Q
    ||||||||||||| |||||| || | |||||||||||||||   |||||| |||||||||||||||| |||||||  |||||||||||||||||||| ||    
T  4555354 ctcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaa 4555255  T
Q  197 atagg 201  Q
    |||||    
T  4555254 atagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 7072707 - 7072589
Alignment:
Q  87 cggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaatta--acatacttacaaaaagaaaaatttgggcaa--tctgaaa 182  Q
    ||||||||| ||||||||||||||| |||  | |||| || ||||||||||||| ||||  ||| ||||| ||||||||||  |||| |||  |||||||    
T  7072707 cggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctgaaa 7072608  T
Q  183 attctcacacgcaaatagg 201  Q
    |||||| |||| |||||||    
T  7072607 attctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 34523222 - 34523270
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatc 105  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||||    
T  34523222 ggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 34523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 34905971 - 34906028
Alignment:
Q  97 ggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatactta 154  Q
    ||||||||||||||| |||||| ||||  || |||||||||||| ||||||| |||||    
T  34905971 ggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 28996712 - 28996897
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| |||||||||  |||||||||||||| |||||  ||||||||||||| ||||| ||||||||| |||||||    
T  28996712 ggggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttaca 28996811  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28996812 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||| ||||||||| ||||||||| ||||| |||||| ||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 34948942 - 34948761
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||||| | ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | ||||||    
T  34948942 gggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 34948843  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||||||||||||||||||||||| |||||| ||||||| ||| | ||||||||||| ||||||||||||||||||||    
T  34948842 aaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 29743265 - 29743450
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||||||| ||| ||||| |||| |||| ||||| ||||||||| |||||| ||||||||||||| |||||   ||||||| | |||||    
T  29743265 ggggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttaca 29743364  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
     |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || ||| ||||||||    
T  29743365 gaaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctc 29743450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 13837804 - 13837985
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||||||| || |||| | || |||||||||||| |||| | ||||||| ||||||||||||  || |||| | ||||||    
T  13837804 gggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaa 13837903  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13837904 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 398600 - 398784
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||  ||||||| | ||| ||    
T  398600 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataa 398699  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  398700 aaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  91 cgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcac 190  Q
    ||||| |||||||||||| || |||| | ||||||||||||||||||| | ||||||| | || ||||||||||||||||||||||||||||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  191 acgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||| ||||| ||||||| |||||||||| |||||||||| ||| ||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 24698000 - 24697899
Alignment:
Q  59 ggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaa 158  Q
    ||||||||||||| |||||||||||||||  |||||| ||||| ||||||||| ||| || ||||| ||||||||||||||| ||||||| |||||||||    
T  24698000 ggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaa 24697901  T
Q  159 aa 160  Q
    ||    
T  24697900 aa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 31028545 - 31028435
Alignment:
Q  61 cggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaa 160  Q
    ||||||||||| ||||||||||||  |||| |||| | ||||||||||||| |||||| |||||| |||||| ||||||  ||||||| | |||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  161 gaaaaatttgg 171  Q
    | ||| |||||    
T  31028445 ggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 13646999 - 13647054
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatc 112  Q
    ||||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||    
T  13646999 ggggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataatc 13647054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 34385573 - 34385518
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatc 112  Q
    ||||||||||||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  34385573 ggggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataatc 34385518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 24695472 - 24695572
Alignment:
Q  59 ggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaa 158  Q
    |||||||||||||||||  |||| |||||  |||||||||||  |||||| || |||  | ||||| | ||||||||||||| ||||||| |||||||||    
T  24695472 ggcggtttcaccgtccga-gacctcggacactcgcccaggctaaatcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaa 24695570  T
Q  159 aa 160  Q
    ||    
T  24695571 aa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 34389240 - 34389056
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||    
T  34389240 gggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaa 34389141  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  34389140 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 26624727 - 26624913
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgat-cgataatctttgcatattagacccaacccaaaagccaattaacatacttac 155  Q
    ||||||||||||||| ||||| ||||||| ||||||||  |||||||| ||||||| |||||||||||||||||| |||||||  |||||||| ||||||    
T  26624727 ggggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttac 26624826  T
Q  156 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26624827 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 37002329 - 37002144
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||| ||||||  | | ||||||||||||| |||||| ||||||||||| ||||||| ||||||||| |||||||    
T  37002329 ggggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttaca 37002230  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  37002229 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 8867916 - 8867733
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||| | | |||||    
T  8867916 ggggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttaca 8867817  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatc 240  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  8867816 aaaagaaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 43184653 - 43184468
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| |||||||  |||| ||||||| | ||||||||||||||| ||| |  || ||||  ||||||||||||||||||||||||||||    
T  43184653 ggggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttaca 43184554  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  43184553 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 35090180 - 35090335
Alignment:
Q  87 cggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattc 186  Q
    ||||||||| ||||||||| ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  35090180 cggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaattc 35090279  T
Q  187 tcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  35090280 tcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 78 - 239
Target Start/End: Complemental strand, 3114260 - 3114099
Alignment:
Q  78 gaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatc 177  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  3114260 gaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 3114161  T
Q  178 tgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  3114160 tgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 33685546 - 33685731
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||| | | ||||| | ||||||||||||||| |||||| |||| |||||||||||||||| ||||||| |||||||    
T  33685546 ggggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttaca 33685645  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||| ||||||||||||||||| |||||    
T  33685646 aaaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 36658205 - 36658348
Alignment:
Q  99 ctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 198  Q
    ||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  36658205 ctcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacgcaaat 36658304  T
Q  199 aggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  36658305 aggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 38638380 - 38638237
Alignment:
Q  98 gctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 197  Q
    ||||||| |||||| |||||| |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  198 taggtctcggaattttatttaacacactattgacgggttcatct 241  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 5555470 - 5555651
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||  | ||||||    
T  5555470 gggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaa 5555569  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  5555570 aaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 7002707 - 7002892
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||  ||||||||| |||||||||||  || |||  | |||| |||||||||||||||||||||||| || ||||    
T  7002707 ggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacataca 7002806  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  7002807 aaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 7048578 - 7048763
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||| ||||||||||||  ||||||||| |||||||||||  || |||  | |||| |||||||||||||||||||||||| || ||||    
T  7048578 ggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacataca 7048677  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  7048678 aaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 36630816 - 36630983
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| |||| || ||||| ||||| | ||||||| | |||||||||||||||||||||||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 97 - 242
Target Start/End: Complemental strand, 40920148 - 40920003
Alignment:
Q  97 ggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 196  Q
    ||||||||||||||| |||||| ||||||   |||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||    
T  40920148 ggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgcaa 40920049  T
Q  197 ataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  40920048 ataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 76 - 240
Target Start/End: Complemental strand, 14777273 - 14777109
Alignment:
Q  76 gcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaa 175  Q
    |||| ||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||  ||||||| | ||||||||||||||||||||||||    
T  14777273 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaa 14777174  T
Q  176 tctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatc 240  Q
    |||||||||| ||||||| |||||||||| ||||||||||||| |||||||||||| | ||||||    
T  14777173 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 8394125 - 8394292
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||| |||| || ||||| ||||| | ||||||| | |||||||| ||||||||||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  134 aaaagccaattaacatacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 201  Q
    ||||||| ||||||| | ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 26502797 - 26502899
Alignment:
Q  62 ggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaag 161  Q
    |||| ||||||  ||||||||| | | ||||||| |||||||||||   | |||||||||||  ||||||||||||||| ||||||| || ||||||||     
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaa 26502895  T
Q  162 aaaa 165  Q
    ||||    
T  26502896 aaaa 26502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 26589917 - 26589815
Alignment:
Q  62 ggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaag 161  Q
    |||| ||||||  ||||||||| | | ||||||| |||||||||||   | |||||||||||  ||||||||||||||| ||||||| || ||||||||     
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaa 26589819  T
Q  162 aaaa 165  Q
    ||||    
T  26589818 aaaa 26589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 35907535 - 35907719
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||||||||| ||||||||| ||| ||||||||| |||| |||||||||| |||||| ||||||||||||||||||||||||||  | ||||||||    
T  35907535 gggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaa 35907634  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  35907635 aaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 57 - 241
Target Start/End: Original strand, 17445295 - 17445479
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||  | |||||||||||   ||||||||| |||| |||| ||||| |||| | |||||| |||||||||||| ||||||||| |||||||    
T  17445295 ggggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttaca 17445394  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatct 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  17445395 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 3828967 - 3829150
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||||| |  ||||| ||||||||||||||| | || |||||||||||| |||||| |||| ||||||||||||||   ||||||| ||||||||    
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  3829067 aaagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 321561 - 321377
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||||||||  |||||||   ||| |||||| || ||||||||||||||| ||||   |||||| |||||||||||| | ||||||| | ||||||    
T  321561 gggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaa 321462  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  321461 aaagaaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 42311126 - 42310941
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||||||||  |||||  ||||||||| |||| |||||| ||||||||||||||| |||||| ||||||| |||||||||||||  |||||| | |||||    
T  42311126 ggggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttaca 42311027  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| | |||||||||||  || |||||||||||||||||||    
T  42311026 aaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 75 - 242
Target Start/End: Complemental strand, 32982223 - 32982056
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||| ||||||| | ||| ||||||||||| |||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||| ||| |||||||| | ||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctc 32982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 7433428 - 7433609
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||| ||||||| |||||||||  |||||||| ||||| |||||| ||||||| ||||||||||||| ||||||| | ||||||    
T  7433428 gggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 7433527  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcat 239  Q
    |||||||| |||||||||||| |||||| |||||| ||||||||||| | ||||||||||| ||||||||||||||||||||    
T  7433528 aaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 26144238 - 26144422
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||  ||||||| | ||| ||    
T  26144238 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataa 26144337  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  26144338 aaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 201
Target Start/End: Complemental strand, 41972459 - 41972314
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||| |||||||| |||||||||| ||||||||  ||||||||||||||| |||||| |||||| |||||| ||||||| ||||||| |||||||    
T  41972459 ggggcggttccaccgtccagcgaccccgggcggtcgcct-ggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttaca 41972361  T
Q  157 aaaagaaaaatttgg--gcaatctgaaaattctcacacgcaaatagg 201  Q
    |||||||||||||||    ||||||||||||||||||||||||||||    
T  41972360 aaaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 201
Target Start/End: Original strand, 33489669 - 33489815
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||||||||  ||||||||||||||||||||  | || | | |||||||| |||| | ||||||| ||| | ||||||| ||||||| ||||||     
T  33489669 ggggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttact 33489768  T
Q  157 aaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 201  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  33489769 aaaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 44352668 - 44352613
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatc 112  Q
    |||||||||||||| ||||||||||||||  |||||||| ||||||||||||||||    
T  44352668 ggggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataatc 44352613  T

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Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 31866959 - 31867013
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataat 111  Q
    ||||||||||||||| ||||||||||||| ||||||||| || |||| |||||||    
T  31866959 ggggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataat 31867013  T

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Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 23313221 - 23313345
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatct-ttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    ||||||||  |||||  ||||| | ||| |||| |||| |||||||| ||| || | ||||| ||||||| ||||  |||||   ||||||| | |||||    
T  23313221 gggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttaca 23313320  T
Q  157 aaaagaaaaatttgggcaatctgaa 181  Q
    |||||||||||||||||||||||||    
T  23313321 aaaagaaaaatttgggcaatctgaa 23313345  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  208 aattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  208 aattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||| |||||||||||||||||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

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Target: scaffold0502 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 75 - 242
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  75 ggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 174  Q
    ||||||||||| ||||||||| ||||||||| ||||| |||||| ||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  175 atctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

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Target: scaffold0154 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 31462 - 31647
Alignment:
Q  57 ggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttaca 156  Q
    |||||||||||| || ||||||||||| ||||||||||| ||||||||||||||| |||||| | ||||||||||||||||||| ||||||| |||||||    
T  31462 ggggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttaca 31561  T
Q  157 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| | ||||||||||  |||||||||||| ||||||||||    
T  31562 aaaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

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Target: scaffold0041 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 52947 - 53092
Alignment:
Q  97 ggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 196  Q
    ||||||||||||||| |||||| ||||||   |||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||    
T  52947 ggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgcaa 53046  T
Q  197 ataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  53047 ataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

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Target: scaffold0069 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 17825 - 18009
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    ||||||||  |||||  ||||||||||  || ||| || ||||||||||||||| |||||| ||||||| ||||||||||||| ||||||| | ||||||    
T  17825 gggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 17924  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||||||| |||||||||||| | ||||||||    
T  17925 aaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 18009  T

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Target: scaffold0002 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 480641 - 480457
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||||||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||  ||||||| | ||| ||    
T  480641 gggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataa 480542  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  480541 aaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 480457  T

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Target: scaffold2142 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 505 - 689
Alignment:
Q  58 gggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacatacttacaa 157  Q
    |||||||| ||||||   |||| ||||| ||||||||| ||||||||||||||| |||||| ||||||| ||||| ||||||  ||||||| | ||| ||    
T  505 gggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataa 604  T
Q  158 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttaacacactattgacgggttcatctc 242  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||  |||||||||||| | ||||||||    
T  605 aaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 689  T

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Target: scaffold0769 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 1258 - 1307
Alignment:
Q  56 gggggcggtttcaccgtccggcgaccccggacggtcgcccaggctcgatc 105  Q
    ||||||||||| |||| ||||||||||||| ||||||||| |||||||||    
T  1258 gggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 1307  T

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