View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1957_high_10 (Length: 476)
Name: NF1957_high_10
Description: NF1957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1957_high_10 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 389; Significance: 0; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 19 - 463
Target Start/End: Original strand, 36425131 - 36425575
Alignment:
| Q |
19 |
ggaatttggtaccacgatttgcaaccccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaa |
118 |
Q |
| |
|
|||||||||||| || |||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36425131 |
ggaatttggtactactatttgcttttccaaactgttgtttgggttgcaaatagtgatgctcccatcaatgacacttctggaattctatcaatcgacccaa |
36425230 |
T |
 |
| Q |
119 |
atgggaatctagaactccaccacaaacttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacaccaatgttatagc |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
36425231 |
atgggaatctagaactccaccacaaacttagcaccattcccatttggtctaccaatgtttcattaacacattcacaaagaaataacaccaatgttatagc |
36425330 |
T |
 |
| Q |
219 |
tcaactattggatataggaaaccttgttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttccatat |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
36425331 |
tcaactattggatataggaaaccttgttctgaggttaaacgacaccgaaactgccatctgggaaagcttggatcatcccacagacacaatgcttccatat |
36425430 |
T |
 |
| Q |
319 |
ataaagcttggttttgatagaaaaattaatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaattca |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
36425431 |
ataaagcttggttttgatagaaaaattaatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcaccgtgaaattca |
36425530 |
T |
 |
| Q |
419 |
gcacaattggcaaaccgcagttgtttatgtacaaccgtgatgttc |
463 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36425531 |
gcacaattggcaaaccgcagttgtttatgtacaaccgtgatgttc |
36425575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 45 - 459
Target Start/End: Original strand, 36410991 - 36411405
Alignment:
| Q |
45 |
ccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaaatgggaatctagaactccaccacaaa |
144 |
Q |
| |
|
|||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
36410991 |
ccaaactgttgtttgggttgcaaatagagatgctcccatcaatgacacttctggaattctatcaatcaaccaaaatgggaatctagaactccaccacaac |
36411090 |
T |
 |
| Q |
145 |
cttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacaccaatgttatagctcaactattggatataggaaaccttg |
244 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36411091 |
cttagcaccattcccatttggtctaccaatgtttcattaacacagtcacaaagaaataacaccaatgttatagctcaactattggatataggaaaccttg |
36411190 |
T |
 |
| Q |
245 |
ttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttccatatataaagcttggttttgatagaaaaat |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| |
|
|
| T |
36411191 |
ttctgaggttaaacgacaccgaaactgccatctgggaaagctttgatcatcccacagacacaatgcttccgtatcaaaagattggttttgatagaaaaat |
36411290 |
T |
 |
| Q |
345 |
taatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaattcagcacaattggcaaaccgcagttgttt |
444 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| |
|
|
| T |
36411291 |
taatcaaagttgggtccttcaatcctggaagacagatgatgaccctggaaaaggtgcgttcacggtgaaattcagcaccattggcaaaccacaattgttt |
36411390 |
T |
 |
| Q |
445 |
atgtacaaccgtgat |
459 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
36411391 |
atgtacaaccatgat |
36411405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 45 - 459
Target Start/End: Original strand, 36416322 - 36416736
Alignment:
| Q |
45 |
ccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaaatgggaatctagaactccaccacaaa |
144 |
Q |
| |
|
|||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
36416322 |
ccaaactgttgtttgggttgcaaatagagatgctcccatcaatgacacttctggaattctatcaatcaaccaaaatgggaatctagaactccaccacaac |
36416421 |
T |
 |
| Q |
145 |
cttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacaccaatgttatagctcaactattggatataggaaaccttg |
244 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36416422 |
cttagcaccattcccatttggtctaccaatgtttcattaacacagtcacaaagaaataacaccaatgttatagctcaactattggatataggaaaccttg |
36416521 |
T |
 |
| Q |
245 |
ttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttccatatataaagcttggttttgatagaaaaat |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| |
|
|
| T |
36416522 |
ttctgaggttaaacgacaccgaaactgccatctgggaaagctttgatcatcccacagacacaatgcttccgtatcaaaagattggttttgatagaaaaat |
36416621 |
T |
 |
| Q |
345 |
taatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaattcagcacaattggcaaaccgcagttgttt |
444 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| |
|
|
| T |
36416622 |
taatcaaagttgggtccttcaatcctggaagacagatgatgaccctggaaaaggtgcgttcacggtgaaattcagcaccattggcaaaccacaattgttt |
36416721 |
T |
 |
| Q |
445 |
atgtacaaccgtgat |
459 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
36416722 |
atgtacaaccatgat |
36416736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 19 - 454
Target Start/End: Original strand, 36403648 - 36404086
Alignment:
| Q |
19 |
ggaatttggtaccacgatttgcaaccccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaa |
118 |
Q |
| |
|
|||||||||||| || |||||| | |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||| || ||||||| |
|
|
| T |
36403648 |
ggaatttggtactacaatttgccaatccaaactgttgtttgggttgcaaacagagatgctcccatcaatgacacttctgggattttatccattgacccaa |
36403747 |
T |
 |
| Q |
119 |
atgggaatctagaactccaccacaaacttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacaccaatg---ttat |
215 |
Q |
| |
|
|||| ||||||| | | |||||||| | ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||||| |||| |
|
|
| T |
36403748 |
atggaaatctagtaattcaccacaaccatagcaccattcccatttggtctaccgatgtttcatttccacaatcacaaagaaatagcaccaatgctgttat |
36403847 |
T |
 |
| Q |
216 |
agctcaactattggatataggaaaccttgttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttcca |
315 |
Q |
| |
|
||| || ||| || |||| |||||||||||||| | ||||| |||| |||||| |||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
36403848 |
agcgaaattatcagacatagcaaaccttgttctgatgataaacaacacaaaaactgtcatctgggaaagctttgatcatcccacagacaccttgcttcca |
36403947 |
T |
 |
| Q |
316 |
tatataaagcttggttttgatagaaaaattaatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaat |
415 |
Q |
| |
|
||| ||||| | || ||| ||||||||| ||||||||| |||||||||||||| |||||||| || |||||||||||||||||||||||||||||| ||| |
|
|
| T |
36403948 |
tatctaaagatagggtttaatagaaaaactaatcaaagctggttccttcaatcctggaagacagatgatgaccctggaaaaggtgcgttcacggtggaat |
36404047 |
T |
 |
| Q |
416 |
tcagcacaattggcaaaccgcagttgtttatgtacaacc |
454 |
Q |
| |
|
||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
36404048 |
tcagcaccattggtaaacctcagttgtttatgtacaacc |
36404086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 45 - 454
Target Start/End: Original strand, 36396741 - 36397153
Alignment:
| Q |
45 |
ccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaaatgggaatctagaactccaccacaaa |
144 |
Q |
| |
|
|||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
36396741 |
ccaaactgttgtttgggttgcaaatagagatgctcccatcaatgacacttctggaattctatcaatcaaccaaaatgggaatctagaactccaccacaac |
36396840 |
T |
 |
| Q |
145 |
cttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacacca---atgttatagctcaactattggatataggaaacc |
241 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||||||||| ||||||||||||| ||| | ||||||||| || || || | || |||| |
|
|
| T |
36396841 |
cttagcaccattccaatttggtccactaatgtttcattaacactatcacaaagaaatatcactagtgctgttatagcaaaattaacagacaaagcaaaca |
36396940 |
T |
 |
| Q |
242 |
ttgttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttccatatataaagcttggttttgatagaaa |
341 |
Q |
| |
|
||||||||| | ||||| |||| |||||| ||| |||||||||||| |||||||||||||||| | ||||||||| || | |||||||||||||||| |
|
|
| T |
36396941 |
ttgttctgatgataaacaacacaaaaactgtcatttgggaaagctttgatcatcccacagacaccttccttccatatcaaaggtttggttttgatagaaa |
36397040 |
T |
 |
| Q |
342 |
aattaatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaattcagcacaattggcaaaccgcagttg |
441 |
Q |
| |
|
|| ||||||||||||| ||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| || || | ||| |||||| |
|
|
| T |
36397041 |
aactaatcaaagttggccccttcaatcctggaagacagaagatgaccctggaaaaggtgcattcacggtgaaattcagcagcataggtatacctcagttg |
36397140 |
T |
 |
| Q |
442 |
tttatgtacaacc |
454 |
Q |
| |
|
||||||||||||| |
|
|
| T |
36397141 |
tttatgtacaacc |
36397153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 22 - 459
Target Start/End: Original strand, 36372979 - 36373416
Alignment:
| Q |
22 |
atttggtaccacgatttgcaaccccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaaatg |
121 |
Q |
| |
|
||||||||| || |||||| | |||||||||||| ||||||||||| || || ||| ||||| || ||||||||||||||||||||||| ||||||| |
|
|
| T |
36372979 |
atttggtacaacaatttgccaatccaaactgttgtttgggttgcaaatagaaatagtccaatcaacgatacttctggaattctatcaatcgatccaaatg |
36373078 |
T |
 |
| Q |
122 |
ggaatctagaactccaccacaaacttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacaccaatgttatagctca |
221 |
Q |
| |
|
||||||| |||| ||||||| | ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||| ||||||||||| |
|
|
| T |
36373079 |
aaaatctagtactcaaccacaaccgtagcaccattcccatttggtctaccgatgtttcattaccacaatcacaaagaaatagcaccagggttatagctca |
36373178 |
T |
 |
| Q |
222 |
actattggatataggaaaccttgttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttccatatata |
321 |
Q |
| |
|
| ||| |||| ||| |||||||||||||| | ||||| ||||| |||||| | |||||||||||| ||||||| |||||||| ||||||||||| || |
|
|
| T |
36373179 |
attatcggatgtagcaaaccttgttctgatgataaacaacaccaaaactgtattatgggaaagctttgatcatccaacagacaccttgcttccatatcta |
36373278 |
T |
 |
| Q |
322 |
aagcttggttttgatagaaaaattaatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaattcagca |
421 |
Q |
| |
|
||| |||| ||| ||||||||| ||||||||| |||||||||||||| |||||||| || |||||||||||||| ||||| ||||| |||||||||| || |
|
|
| T |
36373279 |
aagattgggtttaatagaaaaactaatcaaagctggttccttcaatcctggaagacagatgatgaccctggaaatggtgcattcacagtgaaattcaaca |
36373378 |
T |
 |
| Q |
422 |
caattggcaaaccgcagttgtttatgtacaaccgtgat |
459 |
Q |
| |
|
|||| |||||| ||||||||||||||||||| |||| |
|
|
| T |
36373379 |
gcattgtcaaacctcagttgtttatgtacaaccatgat |
36373416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 19 - 459
Target Start/End: Original strand, 36368360 - 36368800
Alignment:
| Q |
19 |
ggaatttggtaccacgatttgcaaccccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaa |
118 |
Q |
| |
|
||||| |||||| || |||||| | |||||||||||| ||||||||||| || ||| |||| |||||||||||||||||||||||||||||||| | || |
|
|
| T |
36368360 |
ggaatctggtacaacaatttgccaatccaaactgttgtttgggttgcaaatagagatactccaatcaatgacacttctggaattctatcaatcgatcgaa |
36368459 |
T |
 |
| Q |
119 |
atgggaatctagaactccaccacaaacttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacaccaatgttatagc |
218 |
Q |
| |
|
|||| ||||||| ||| ||||||| ||||||| ||||||||||||||||||| ||||||| || | |||||| | ||||| |||||| |||||||| |
|
|
| T |
36368460 |
atggaaatctagttctcaaccacaaccttagcaacattcccatttggtctaccgctgtttcactactgcagtcacagataaatagcaccaacgttatagc |
36368559 |
T |
 |
| Q |
219 |
tcaactattggatataggaaaccttgttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttccatat |
318 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||| | |||| | || |||||| ||| |||||||| ||| ||||||| ||||| || ||||||||||| |
|
|
| T |
36368560 |
tcaactatcggatataggaaaccttgttttgatgctaaaaagctccaaaactgtcatatgggaaagttttgatcatcctacagataccttgcttccatat |
36368659 |
T |
 |
| Q |
319 |
ataaagcttggttttgatagaaaaattaatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaattca |
418 |
Q |
| |
|
| ||| |||||||||||||||||| ||||||||| ||||| || |||||||||||||| || ||||||||||||||||| || ||||| ||||||||| |
|
|
| T |
36368660 |
ctcaaggttggttttgatagaaaaactaatcaaagctggtttctccaatcatggaagacagatgatgaccctggaaaaggcgcattcacattgaaattca |
36368759 |
T |
 |
| Q |
419 |
gcacaattggcaaaccgcagttgtttatgtacaaccgtgat |
459 |
Q |
| |
|
||| ||||| ||||| ||||||||||||||||||| |||| |
|
|
| T |
36368760 |
gcagcattggaaaacctcagttgtttatgtacaaccatgat |
36368800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 19 - 459
Target Start/End: Original strand, 36386932 - 36387375
Alignment:
| Q |
19 |
ggaatttggtaccacgatttgcaaccccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaa |
118 |
Q |
| |
|
|||||||||||| || |||||| | |||||||||||| ||||||||||| || || ||| ||||| | ||||| |||||| ||||| ||||||||| |
|
|
| T |
36386932 |
ggaatttggtactacaatttgccaatccaaactgttgtttgggttgcaaatagaaatagtccaatcaacaatacttccggaattttatca-tcgacccaa |
36387030 |
T |
 |
| Q |
119 |
atgggaatctagaactccaccacaaacttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacacca---atgttat |
215 |
Q |
| |
|
|||| ||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| | | ||||||||||||| ||| | |||||| |
|
|
| T |
36387031 |
atggaaatctagtactccaccacaacctaagcaccattcccatttggtctaccaatgtttcattcccgcaatcacaaagaaatagcactagtgctgttat |
36387130 |
T |
 |
| Q |
216 |
agctcaactattggatataggaaaccttgttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttcca |
315 |
Q |
| |
|
||||||||||| |||||||| |||||||||| ||| | ||||| ||||| |||||| | |||||||||||| ||||||| |||||||| |||||||| |
|
|
| T |
36387131 |
agctcaactatcggatatagcaaaccttgttttgatgataaacaacaccaaaactgtattatgggaaagctttgatcatccaacagacaccttgcttcca |
36387230 |
T |
 |
| Q |
316 |
tatataaagcttggttttgat-agaaaaattaatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaa |
414 |
Q |
| |
|
||| ||| ||||||||||||| | ||||| ||||||||| |||||||||||||| |||||||| || |||||||||||||| ||||| ||||| |||||| |
|
|
| T |
36387231 |
tatctaaggcttggttttgataaaaaaaactaatcaaagctggttccttcaatcctggaagacggatgatgaccctggaaatggtgcattcacagtgaaa |
36387330 |
T |
 |
| Q |
415 |
ttcagcacaattggcaaaccgcagttgtttatgtacaaccgtgat |
459 |
Q |
| |
|
|||||||| ||||||||||| || |||| |||||||||| |||| |
|
|
| T |
36387331 |
ttcagcaccattggcaaacctcaagtgttaatgtacaaccatgat |
36387375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 18 - 452
Target Start/End: Original strand, 36432987 - 36433421
Alignment:
| Q |
18 |
aggaatttggtaccacgatttgcaaccccaaactgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgaccca |
117 |
Q |
| |
|
||||||||||||| || ||||| | |||||||||||| ||||||||||| || ||| |||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
36432987 |
aggaatttggtactacaatttgtcaatccaaactgttgtttgggttgcaaatagagatactccaatcaatgacacttctggaattctatcaatcaaccca |
36433086 |
T |
 |
| Q |
118 |
aatgggaatctagaactccaccacaaacttagcaccattcccatttggtctaccaatgtttcattaacacggtcacaaagaaataacaccaatgttatag |
217 |
Q |
| |
|
||||| ||||||| ||| || |||| ||||||||||||||||||||||||||| |||||||| | | ||||| | ||||| |||| | ||||||| |
|
|
| T |
36433087 |
aatggaaatctagttctcaacaacaaccttagcaccattcccatttggtctaccgatgtttcactccagcaatcacagataaatagcaccgacgttatag |
36433186 |
T |
 |
| Q |
218 |
ctcaactattggatataggaaaccttgttctgaggttaaacgacaccgaaactgccatctgggaaagctttcatcatcccacagacacaatgcttccata |
317 |
Q |
| |
|
||||||||| |||||||||||| ||||| ||| ||||||| ||| |||||| ||| ||||| |||||| || ||||||| ||||| ||||||||| |
|
|
| T |
36433187 |
ctcaactatctgatataggaaactttgttttgatgttaaacagaaccaaaactgtcatatgggatagctttgattatcccacggacacttggcttccata |
36433286 |
T |
 |
| Q |
318 |
tataaagcttggttttgatagaaaaattaatcaaagttggttccttcaatcatggaagaccgacgatgaccctggaaaaggtgcgttcacggtgaaattc |
417 |
Q |
| |
|
| || |||||||||||||||||||| ||||||||| |||||||||||||| |||||||| || |||||||||||||||||||| |||||| |||||||| |
|
|
| T |
36433287 |
tcaaaggcttggttttgatagaaaaactaatcaaagctggttccttcaatcctggaagacagaggatgaccctggaaaaggtgccttcacgttgaaattc |
36433386 |
T |
 |
| Q |
418 |
agcacaattggcaaaccgcagttgtttatgtacaa |
452 |
Q |
| |
|
||||| |||| ||| | ||| | ||||||||||| |
|
|
| T |
36433387 |
agcaccgttggtaaaactcagctttttatgtacaa |
36433421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 55676548 - 55676492
Alignment:
| Q |
49 |
actgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattcta |
105 |
Q |
| |
|
|||||||| ||||||||||| || |||||||| ||||||||||||||||||| |||| |
|
|
| T |
55676548 |
actgttgtttgggttgcaaatagagatgctccaatcaatgacacttctggaaatcta |
55676492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 34712306 - 34712389
Alignment:
| Q |
49 |
actgttgtctgggttgcaaacagggatgctcccatcaatgacacttctggaattctatcaatcgacccaaatgggaatctagaa |
132 |
Q |
| |
|
|||||||| ||||||||||| || ||| |||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||| |
|
|
| T |
34712306 |
actgttgtttgggttgcaaatagagatactccaatcaatgacacttctggaattctatcaattgaccaaaatggaaatctagaa |
34712389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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