View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1957_high_22 (Length: 275)
Name: NF1957_high_22
Description: NF1957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1957_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 19 - 266
Target Start/End: Original strand, 44298300 - 44298547
Alignment:
| Q |
19 |
tcctgcacctagcaaaacagcgacgtaagaccatatttgaagcttcattctactttgcaactttgcacccataaaatcattagccaataaatcaacaagt |
118 |
Q |
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| T |
44298300 |
tcctgcacctagcaaaacagcgacgtaagaccatatttgaagcttcattctactttgcaactttgcacccataaaatcattagccaataaatcaacaagt |
44298399 |
T |
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| Q |
119 |
gccatataatttaaaagccctgcagacatagcatttagaaccccttctacaatgagtgcagttggactagtgttactatacacttttgataaaccaatac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
44298400 |
gccatataatttaaaagccctgcagacatagcatttagaaccccttctacaatgagtgcagttggactagtgttactatacacttttgataaaccaatcc |
44298499 |
T |
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| Q |
219 |
ccaatgctattccaaacggcgtcgtcgctgaaaagaagaatatcattg |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44298500 |
ccaatgctattccaaacggcgtcgtcgctgaaaagaagaatatcattg |
44298547 |
T |
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