View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1957_low_34 (Length: 222)
Name: NF1957_low_34
Description: NF1957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1957_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 23522857 - 23523000
Alignment:
| Q |
63 |
gaagatttgaatgtcattactgttgtagaaactttcctacttcacaagccttaggtggtcatcaaaacgcacacaaaagagaacgtcaacacgcaaaacg |
162 |
Q |
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| T |
23522857 |
gaagatttgaatgtcattactgttgtagaaactttcctacttcacaagccttaggtggtcatcaaaacgcacacaaaagagaacgtcaacacgcaaaacg |
23522956 |
T |
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| Q |
163 |
acaacaccttcaatcaactatggtacatgctactactttctctg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23522957 |
acaacaccttcaatcaactatggtacatgctactactttctctg |
23523000 |
T |
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