View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19582_high_21 (Length: 293)
Name: NF19582_high_21
Description: NF19582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19582_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 4 - 277
Target Start/End: Original strand, 25630146 - 25630418
Alignment:
| Q |
4 |
aaagagattaacaaatgtgttgtattgtaaatttttaacagcaaccatttagtgagaaagccttaaattatcgaattgaaagataaaaaatatcactgga |
103 |
Q |
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| T |
25630146 |
aaagagagtaaccaaaatgttgtattgtaaatttttaatagcaaccattcagtgagaaagccttaaattatcgaattgaaagataaaaaatatcactgga |
25630245 |
T |
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| Q |
104 |
aaaagaacaggtatcaatggnnnnnnntggtagaatgaatgagtctatgtagaggatgtgtgtgccgaattcagttagtgggaaggaaataaaaaccgaa |
203 |
Q |
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||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
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| T |
25630246 |
aaaagaacaagtatcaatg-aaaaaaatggtagaatgaatgagtctatgtagaggatgtgtgtgccgaattcagttagtgggaaggaaataaaagcctaa |
25630344 |
T |
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| Q |
204 |
acgttatatttgtagtcggcttctatttgccaaactgttattgcatgagattatagagtgagttatggcatgtg |
277 |
Q |
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|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
25630345 |
acgttatatttgtagtcggcttctattttccaaactgttgttgcatgagattatagagtgagttatggcatgtg |
25630418 |
T |
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