View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19582_high_22 (Length: 278)
Name: NF19582_high_22
Description: NF19582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19582_high_22 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 7 - 238
Target Start/End: Original strand, 26276944 - 26277175
Alignment:
| Q |
7 |
gatcaagagtttgagcaacacaaaagaatgttgggagagcttagggcaacaaatttctcatgaagagctctaagatatagaaaagatatagaagcttcat |
106 |
Q |
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| T |
26276944 |
gatcaagagtttgagcaacacaaaagaatgttgggagagcatagggcaacaaatttctcatgaagagctctaagatatagaaaagatatagaagcttcat |
26277043 |
T |
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| Q |
107 |
ttattagtttgtagttgatttattcatattgaagagattaatttcttctactcactcacattgtaaaactttttccaactacatgtgcaataaagtttta |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26277044 |
ttattagtttgtagttgatttattcatattgaagagattaatttcttctactcactcacattgtaaaactttttccaactacatgtgcaataaagtttta |
26277143 |
T |
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| Q |
207 |
catattgaatgcaaattaaattttataattaa |
238 |
Q |
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| T |
26277144 |
catgttgaatgcaaattaaattttatatttaa |
26277175 |
T |
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