View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19582_high_26 (Length: 253)
Name: NF19582_high_26
Description: NF19582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19582_high_26 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 2427735 - 2427987
Alignment:
| Q |
1 |
aatttgaaggagaaatacaaggccgccaaatattaatatcccaagcaagagataaagaaacatgattaacaaatctaaacagttgtttggttgtggtttt |
100 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||| |
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| T |
2427735 |
aatttgaaggaggaatacaaggccgccaaatattaatatcccaagcaagagataaagaaacatgattaacatagctaaacagttgcttggttgtggtttt |
2427834 |
T |
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| Q |
101 |
gccgtctagagaatgcaaccaaacacacttattaagaaaagaggagactgatagcgttaactgaacaatattcgctacaacaaccgattgattcataata |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| |
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| T |
2427835 |
gccgtctagagaatgcaaccaaacacacttatcaagaaaagaggagactgatagtgttaactgaacaatattcgctacaacaactggttgattcataata |
2427934 |
T |
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| Q |
201 |
gcaacagggaggttccaatggcccataaccagcacagacaaaagcaaataagt |
253 |
Q |
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||||| ||||||| ||||||| |||||||||||| |||| |||||||||||| |
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| T |
2427935 |
gcaacggggaggtcccaatggtccataaccagcatggacagaagcaaataagt |
2427987 |
T |
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