View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19583_high_37 (Length: 302)
Name: NF19583_high_37
Description: NF19583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19583_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 293
Target Start/End: Complemental strand, 48813349 - 48813078
Alignment:
| Q |
18 |
cagacaaacacattggattagtttctgatccttgagtttgatttcacatcatggtagagaaaaataaacccgaacattaggagcaccaagtatatacaca |
117 |
Q |
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| T |
48813349 |
cagacaaacacattggattagtttctgatccttgagtttgatttcacatcatggtagagaaaaataaacccgaacattaggagcaccaagtatatacaca |
48813250 |
T |
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| Q |
118 |
gtatacagctacaaaatctgtattaactgagaagagctgtatctgcatcaataatcatgttattttcatttaatcacatatatagcatgcaactttggtt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
48813249 |
gtatacagctacaaaatctgtattaactgagaagagctgtatctgcatcaataatcatgttattttcatttaatcac----atagcatgcaactttggtt |
48813154 |
T |
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| Q |
218 |
aaatcaattatgaattcttacatatgggatgtgatcacataaagaagttgaaagcaaaatcaatcataagaataat |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48813153 |
aaatcaattatgaattcttacatatgggatgtgatcacataaagaagttgaaagcaaaatcaatcataagaataat |
48813078 |
T |
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