View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19583_high_50 (Length: 251)
Name: NF19583_high_50
Description: NF19583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19583_high_50 |
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Alignment Details
Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 3896966 - 3897186
Alignment:
| Q |
7 |
atagggtggatggttgaaactgaaacggaagataagaaaggatatatagaccgaaagaaagctcgaatatgannnnnnnngtctaatggagcaccaaaga |
106 |
Q |
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| T |
3896966 |
atagggtggatgtttgaaactgaaacggaagataagaaaggatatatagaccgaaggaaagctcgaatatgattttttt-gtctaatggagcaccaaaga |
3897064 |
T |
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| Q |
107 |
atgaaaatcacttttactaaagtagtataagagaaagagattaagtcacgttcaaacgattaattaggttatcaggagaaggagccttagaaatatagag |
206 |
Q |
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| T |
3897065 |
atgaaaatcacttttactaaagtagtataagagaaagagattaagtcacgttcaaacgattaattaggttttcaggagaaggatccttagaaatatagag |
3897164 |
T |
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| Q |
207 |
ttctagaaagaagcaagttctt |
228 |
Q |
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| T |
3897165 |
ttctagaaagaagtaagttctt |
3897186 |
T |
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