View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19583_high_51 (Length: 247)
Name: NF19583_high_51
Description: NF19583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19583_high_51 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 232
Target Start/End: Complemental strand, 28438610 - 28438394
Alignment:
| Q |
16 |
aaaattccatgtagtgtaaacttgagtaataatctatgaagcattaacatagaaacattcattagacacgacattgacacttacatgtagaaactagtaa |
115 |
Q |
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| T |
28438610 |
aaaattccatgtagtgtaaacttgagtaataatctatgaagcactaagacagaaacattcattagacacgacattgacacttacacgtagaaactaataa |
28438511 |
T |
|
| Q |
116 |
cagtttgagaaaatgaaagttatagaatgtaaccacaccacatgtatcgttgtactattgatgtcatacagtgacacatgtcagacacactttcaatcta |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
28438510 |
cagtttgagaaaatgaaagttatagaatgtaaccacaccacatgtatcgttgtactattgatgtcatacagtgacacatgccagacacactttcaatctt |
28438411 |
T |
|
| Q |
216 |
aagtgttggtacgtact |
232 |
Q |
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||||||||||| ||||| |
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| T |
28438410 |
aagtgttggtatgtact |
28438394 |
T |
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