View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19583_low_10 (Length: 541)

Name: NF19583_low_10
Description: NF19583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19583_low_10
NF19583_low_10
[»] chr8 (66 HSPs)
chr8 (381-541)||(12670247-12670407)
chr8 (381-541)||(30454094-30454254)
chr8 (384-541)||(2626495-2626657)
chr8 (383-541)||(36720772-36720932)
chr8 (382-541)||(28817624-28817785)
chr8 (384-541)||(13160678-13160836)
chr8 (384-541)||(17823552-17823711)
chr8 (380-541)||(35261655-35261818)
chr8 (384-539)||(29521685-29521842)
chr8 (385-541)||(45071241-45071398)
chr8 (383-541)||(39460993-39461155)
chr8 (407-541)||(20869523-20869655)
chr8 (381-541)||(7136524-7136688)
chr8 (381-541)||(8897761-8897923)
chr8 (381-541)||(6760798-6760962)
chr8 (383-541)||(26954108-26954271)
chr8 (383-541)||(44530125-44530285)
chr8 (382-537)||(18164758-18164914)
chr8 (383-541)||(12625865-12626026)
chr8 (390-541)||(20284075-20284232)
chr8 (390-541)||(21070703-21070861)
chr8 (383-535)||(31457155-31457308)
chr8 (397-541)||(44781517-44781665)
chr8 (382-541)||(25250498-25250661)
chr8 (406-540)||(24365081-24365218)
chr8 (383-496)||(19729363-19729476)
chr8 (386-500)||(29877111-29877227)
chr8 (382-509)||(5135288-5135416)
chr8 (381-499)||(20869941-20870063)
chr8 (396-508)||(8483950-8484064)
chr8 (396-518)||(389642-389768)
chr8 (384-491)||(16225045-16225156)
chr8 (384-541)||(28407392-28407538)
chr8 (393-541)||(22598133-22598282)
chr8 (398-541)||(42083712-42083858)
chr8 (406-541)||(24245427-24245562)
chr8 (381-458)||(26102578-26102655)
chr8 (428-531)||(23000263-23000365)
chr8 (437-538)||(35105902-35106006)
chr8 (406-541)||(11000971-11001109)
chr8 (396-508)||(5689640-5689754)
chr8 (382-500)||(10857845-10857966)
chr8 (406-541)||(14017990-14018128)
chr8 (452-534)||(11748282-11748366)
chr8 (149-228)||(20242063-20242142)
chr8 (149-228)||(20250925-20251004)
chr8 (149-243)||(20241956-20242050)
chr8 (149-243)||(20251017-20251111)
chr8 (437-491)||(23286378-23286432)
chr8 (474-538)||(30962865-30962929)
chr8 (383-541)||(40604905-40605064)
chr8 (382-539)||(36918102-36918261)
chr8 (382-462)||(16013511-16013593)
chr8 (397-506)||(17250888-17251001)
chr8 (424-493)||(43942348-43942421)
chr8 (430-541)||(44742564-44742678)
chr8 (283-367)||(20241863-20241947)
chr8 (283-367)||(20251120-20251204)
chr8 (383-447)||(35107310-35107374)
chr8 (20-76)||(20242315-20242371)
chr8 (20-76)||(20250789-20250845)
chr8 (381-433)||(27468089-27468141)
chr8 (149-230)||(20242153-20242235)
chr8 (382-472)||(26457776-26457864)
chr8 (384-426)||(23286337-23286379)
chr8 (68-116)||(32041340-32041388)
[»] chr6 (59 HSPs)
chr6 (381-541)||(1346940-1347100)
chr6 (383-541)||(1354756-1354914)
chr6 (382-534)||(29355853-29356009)
chr6 (383-541)||(12221913-12222076)
chr6 (381-541)||(9161099-9161262)
chr6 (380-540)||(2166406-2166570)
chr6 (380-540)||(2178039-2178203)
chr6 (382-499)||(26097178-26097295)
chr6 (382-499)||(25557743-25557860)
chr6 (383-539)||(28007604-28007761)
chr6 (391-541)||(3815084-3815236)
chr6 (391-507)||(32579436-32579553)
chr6 (381-541)||(1941831-1941993)
chr6 (397-531)||(23240837-23240971)
chr6 (383-540)||(32728156-32728314)
chr6 (381-532)||(18277190-18277343)
chr6 (451-541)||(8409219-8409311)
chr6 (439-541)||(13905034-13905138)
chr6 (406-541)||(14553488-14553626)
chr6 (397-541)||(15866052-15866196)
chr6 (380-541)||(24097557-24097716)
chr6 (446-541)||(6024209-6024306)
chr6 (384-541)||(7947371-7947531)
chr6 (396-509)||(33138841-33138956)
chr6 (474-541)||(14975172-14975239)
chr6 (283-374)||(21861943-21862034)
chr6 (385-541)||(2755422-2755583)
chr6 (384-541)||(12889402-12889562)
chr6 (444-541)||(20400643-20400742)
chr6 (382-446)||(6808468-6808532)
chr6 (381-462)||(12892064-12892147)
chr6 (383-463)||(12885967-12886049)
chr6 (383-462)||(23930126-23930205)
chr6 (382-456)||(13267788-13267862)
chr6 (384-461)||(383760-383837)
chr6 (149-242)||(21862044-21862137)
chr6 (381-522)||(3116126-3116263)
chr6 (474-539)||(12063445-12063510)
chr6 (14-90)||(22860737-22860814)
chr6 (384-525)||(17432332-17432483)
chr6 (474-541)||(24734609-24734676)
chr6 (447-541)||(27855500-27855597)
chr6 (428-541)||(11849031-11849145)
chr6 (420-508)||(15865893-15865982)
chr6 (20-98)||(22860875-22860952)
chr6 (149-217)||(28063624-28063691)
chr6 (336-372)||(13167330-13167366)
chr6 (382-418)||(25997750-25997786)
chr6 (22-85)||(18981350-18981413)
chr6 (408-539)||(22967149-22967287)
chr6 (408-539)||(23821106-23821244)
chr6 (381-435)||(20906783-20906837)
chr6 (488-541)||(8417448-8417501)
chr6 (187-232)||(13167366-13167411)
chr6 (165-232)||(10741501-10741569)
chr6 (163-230)||(21862246-21862313)
chr6 (31-100)||(22860838-22860903)
chr6 (322-374)||(28063793-28063844)
chr6 (481-541)||(33922927-33922987)
[»] chr7 (99 HSPs)
chr7 (383-541)||(21172008-21172166)
chr7 (381-541)||(32758237-32758397)
chr7 (381-535)||(42391097-42391251)
chr7 (384-540)||(10693073-10693229)
chr7 (388-541)||(33871914-33872068)
chr7 (384-541)||(48735122-48735280)
chr7 (385-541)||(42476849-42477005)
chr7 (381-541)||(19426887-19427048)
chr7 (385-538)||(11741774-11741927)
chr7 (382-541)||(42805500-42805663)
chr7 (381-541)||(47077852-47078012)
chr7 (385-541)||(11617589-11617747)
chr7 (382-541)||(42798645-42798806)
chr7 (384-541)||(2541019-2541179)
chr7 (382-541)||(27629610-27629771)
chr7 (381-541)||(34626205-34626366)
chr7 (384-541)||(22698967-22699129)
chr7 (384-538)||(47716438-47716596)
chr7 (383-520)||(31591108-31591245)
chr7 (386-541)||(35334818-35334973)
chr7 (381-541)||(43557448-43557613)
chr7 (406-541)||(19266426-19266563)
chr7 (381-541)||(19265791-19265951)
chr7 (406-541)||(13805078-13805214)
chr7 (384-541)||(23419674-23419833)
chr7 (396-507)||(2662948-2663058)
chr7 (383-541)||(40463853-40464012)
chr7 (381-509)||(7879646-7879776)
chr7 (406-541)||(28362167-28362304)
chr7 (381-534)||(32233132-32233286)
chr7 (428-541)||(14099050-14099165)
chr7 (428-541)||(14409067-14409182)
chr7 (385-541)||(29907393-29907552)
chr7 (408-541)||(48123508-48123643)
chr7 (413-541)||(46354170-46354302)
chr7 (386-518)||(18512455-18512588)
chr7 (385-531)||(18747472-18747621)
chr7 (429-541)||(7644932-7645047)
chr7 (445-541)||(5180218-5180316)
chr7 (385-541)||(3469176-3469338)
chr7 (439-540)||(6736867-6736969)
chr7 (406-498)||(38604546-38604639)
chr7 (383-541)||(39123866-39124031)
chr7 (381-526)||(38262193-38262340)
chr7 (396-541)||(14732833-14732981)
chr7 (396-507)||(21566445-21566559)
chr7 (424-541)||(8148985-8149105)
chr7 (465-541)||(42495917-42495994)
chr7 (385-541)||(16341254-16341413)
chr7 (406-537)||(28078154-28078286)
chr7 (445-541)||(12473280-12473378)
chr7 (380-463)||(27889312-27889395)
chr7 (474-541)||(44123713-44123780)
chr7 (383-492)||(35787268-35787378)
chr7 (475-540)||(7193062-7193127)
chr7 (414-506)||(15108427-15108520)
chr7 (465-541)||(18327010-18327087)
chr7 (420-505)||(1408469-1408556)
chr7 (163-242)||(11828573-11828653)
chr7 (429-519)||(35203437-35203531)
chr7 (474-541)||(7794598-7794665)
chr7 (149-228)||(44338386-44338465)
chr7 (136-243)||(46963788-46963895)
chr7 (252-383)||(11828629-11828756)
chr7 (381-541)||(25198698-25198864)
chr7 (149-243)||(44338279-44338373)
chr7 (254-375)||(6530526-6530647)
chr7 (252-374)||(21813745-21813867)
chr7 (399-541)||(42101899-42102044)
chr7 (187-251)||(11828629-11828693)
chr7 (168-231)||(21813823-21813887)
chr7 (396-501)||(23231573-23231680)
chr7 (149-230)||(21813855-21813938)
chr7 (382-476)||(39093437-39093532)
chr7 (446-541)||(1423972-1424069)
chr7 (382-496)||(23618975-23619088)
chr7 (384-463)||(45018923-45019006)
chr7 (57-98)||(26403154-26403195)
chr7 (283-367)||(44338186-44338270)
chr7 (380-447)||(45811919-45811985)
chr7 (409-476)||(33500556-33500625)
chr7 (381-431)||(36602535-36602585)
chr7 (396-463)||(36267829-36267897)
chr7 (20-76)||(44338638-44338694)
chr7 (189-264)||(6530567-6530647)
chr7 (383-462)||(23065924-23066003)
chr7 (149-230)||(44338476-44338558)
chr7 (295-354)||(46963921-46963980)
chr7 (69-127)||(10236423-10236481)
chr7 (397-486)||(21139761-21139851)
chr7 (428-541)||(22065564-22065678)
chr7 (23-116)||(46963633-46963730)
chr7 (68-121)||(11828531-11828583)
chr7 (474-539)||(21447568-21447633)
chr7 (57-98)||(21813922-21813963)
chr7 (406-450)||(2257654-2257698)
chr7 (163-230)||(15623102-15623169)
chr7 (437-496)||(23604553-23604612)
chr7 (387-439)||(42495865-42495917)
[»] chr1 (105 HSPs)
chr1 (383-541)||(34725097-34725255)
chr1 (381-541)||(47214510-47214670)
chr1 (380-540)||(38478278-38478438)
chr1 (383-541)||(32632556-32632715)
chr1 (380-541)||(46247949-46248112)
chr1 (383-541)||(19414438-19414596)
chr1 (381-539)||(45812534-45812692)
chr1 (383-541)||(14617037-14617197)
chr1 (382-526)||(35253185-35253329)
chr1 (383-541)||(20004089-20004251)
chr1 (383-540)||(12126836-12126993)
chr1 (383-541)||(30395725-30395887)
chr1 (380-541)||(46991803-46991966)
chr1 (381-541)||(18944642-18944807)
chr1 (398-541)||(23768334-23768479)
chr1 (381-541)||(45402094-45402257)
chr1 (379-541)||(27201646-27201812)
chr1 (381-541)||(18724543-18724704)
chr1 (381-541)||(6925099-6925261)
chr1 (383-541)||(27474280-27474439)
chr1 (383-541)||(41319805-41319965)
chr1 (405-540)||(25468284-25468421)
chr1 (383-526)||(10668239-10668386)
chr1 (383-541)||(6983810-6983968)
chr1 (406-541)||(11596512-11596648)
chr1 (381-499)||(31382211-31382330)
chr1 (383-524)||(35005139-35005284)
chr1 (420-541)||(20036219-20036343)
chr1 (396-541)||(2435798-2435946)
chr1 (387-541)||(10378738-10378884)
chr1 (382-541)||(18741955-18742120)
chr1 (396-541)||(35117777-35117927)
chr1 (381-537)||(8197046-8197204)
chr1 (420-541)||(22930105-22930226)
chr1 (384-477)||(4349703-4349796)
chr1 (381-498)||(23796507-23796626)
chr1 (381-540)||(19701570-19701732)
chr1 (438-541)||(4430080-4430185)
chr1 (383-538)||(9939463-9939623)
chr1 (406-540)||(44485131-44485267)
chr1 (445-538)||(22327101-22327196)
chr1 (445-541)||(17470407-17470505)
chr1 (386-541)||(19932755-19932911)
chr1 (437-541)||(33222983-33223089)
chr1 (149-231)||(15630025-15630108)
chr1 (381-541)||(35019229-35019390)
chr1 (386-508)||(22324925-22325049)
chr1 (396-506)||(45264411-45264524)
chr1 (446-541)||(50760288-50760385)
chr1 (396-541)||(27136663-27136811)
chr1 (382-541)||(50811938-50812100)
chr1 (381-477)||(1517308-1517404)
chr1 (381-476)||(43768205-43768300)
chr1 (441-541)||(52910216-52910319)
chr1 (406-474)||(15505632-15505700)
chr1 (474-541)||(2435985-2436052)
chr1 (165-242)||(2072366-2072444)
chr1 (386-541)||(15511150-15511310)
chr1 (441-540)||(24564344-24564445)
chr1 (381-447)||(50606498-50606564)
chr1 (396-540)||(23371124-23371268)
chr1 (438-530)||(31272429-31272522)
chr1 (387-540)||(39214961-39215117)
chr1 (398-507)||(43207528-43207640)
chr1 (383-529)||(19974073-19974221)
chr1 (394-461)||(4249453-4249520)
chr1 (394-461)||(4249777-4249844)
chr1 (394-461)||(4250101-4250168)
chr1 (398-498)||(34148974-34149076)
chr1 (165-242)||(2075896-2075974)
chr1 (474-541)||(25290162-25290231)
chr1 (382-477)||(42304205-42304302)
chr1 (401-539)||(18335305-18335445)
chr1 (406-510)||(30682844-30682948)
chr1 (391-506)||(31442396-31442515)
chr1 (439-541)||(34679274-34679378)
chr1 (8-74)||(15629863-15629929)
chr1 (173-242)||(19825091-19825161)
chr1 (406-500)||(20169111-20169207)
chr1 (476-541)||(21723663-21723727)
chr1 (488-541)||(34714622-34714675)
chr1 (63-130)||(2072299-2072364)
chr1 (63-130)||(2075829-2075894)
chr1 (383-434)||(19386575-19386626)
chr1 (387-462)||(28894561-28894636)
chr1 (69-196)||(3775100-3775226)
chr1 (393-463)||(4430008-4430078)
chr1 (389-451)||(4587568-4587630)
chr1 (383-477)||(20999849-20999943)
chr1 (453-499)||(44745854-44745900)
chr1 (428-477)||(21910693-21910742)
chr1 (496-541)||(40424741-40424786)
chr1 (437-477)||(46859131-46859172)
chr1 (287-359)||(2072458-2072530)
chr1 (441-496)||(21723728-21723784)
chr1 (477-541)||(25554817-25554881)
chr1 (397-449)||(33594144-33594196)
chr1 (476-539)||(22151505-22151568)
chr1 (420-473)||(6358190-6358244)
chr1 (407-477)||(20982773-20982843)
chr1 (395-463)||(7074595-7074664)
chr1 (140-204)||(15629924-15629989)
chr1 (382-435)||(16120823-16120876)
chr1 (452-536)||(49722641-49722726)
chr1 (383-539)||(19656104-19656263)
[»] chr4 (103 HSPs)
chr4 (381-541)||(47528527-47528687)
chr4 (382-541)||(48598823-48598982)
chr4 (384-541)||(20224960-20225117)
chr4 (381-541)||(11054145-11054305)
chr4 (382-539)||(9832311-9832468)
chr4 (382-541)||(5648235-5648395)
chr4 (386-525)||(29207900-29208039)
chr4 (381-541)||(16408598-16408762)
chr4 (385-541)||(6430627-6430784)
chr4 (381-541)||(30639356-30639517)
chr4 (385-541)||(8473621-8473779)
chr4 (381-537)||(17043392-17043549)
chr4 (381-536)||(39077793-39077948)
chr4 (385-541)||(40915805-40915962)
chr4 (381-541)||(5306657-5306822)
chr4 (387-541)||(21646940-21647098)
chr4 (381-541)||(23501769-23501927)
chr4 (382-537)||(54175043-54175202)
chr4 (381-541)||(47443929-47444095)
chr4 (383-541)||(16911538-16911700)
chr4 (380-541)||(35567146-35567309)
chr4 (384-541)||(44363130-44363291)
chr4 (396-541)||(19027824-19027971)
chr4 (382-531)||(25463108-25463258)
chr4 (384-539)||(30690176-30690340)
chr4 (381-500)||(20639655-20639777)
chr4 (382-509)||(10277755-10277882)
chr4 (383-541)||(14983810-14983970)
chr4 (423-534)||(41018833-41018945)
chr4 (406-538)||(49938615-49938746)
chr4 (407-534)||(7385499-7385628)
chr4 (382-497)||(25629069-25629186)
chr4 (382-541)||(13256397-13256556)
chr4 (396-538)||(30496334-30496476)
chr4 (398-541)||(37494827-37494972)
chr4 (437-541)||(14590813-14590920)
chr4 (381-541)||(20908633-20908797)
chr4 (396-541)||(54730225-54730375)
chr4 (420-541)||(47441566-47441689)
chr4 (381-505)||(9987831-9987957)
chr4 (381-541)||(30352577-30352750)
chr4 (381-455)||(38786673-38786747)
chr4 (406-541)||(54966997-54967133)
chr4 (436-541)||(487186-487294)
chr4 (385-499)||(7909281-7909397)
chr4 (384-539)||(32478792-32478942)
chr4 (381-541)||(39029059-39029220)
chr4 (406-497)||(49796818-49796910)
chr4 (381-541)||(10660380-10660544)
chr4 (381-541)||(10874525-10874689)
chr4 (384-541)||(20405069-20405224)
chr4 (136-312)||(54147639-54147813)
chr4 (384-474)||(20225119-20225211)
chr4 (383-493)||(51865037-51865149)
chr4 (397-505)||(21489099-21489210)
chr4 (445-541)||(25343163-25343261)
chr4 (459-541)||(42164224-42164307)
chr4 (384-541)||(55766466-55766625)
chr4 (384-541)||(55830721-55830880)
chr4 (381-539)||(23580205-23580365)
chr4 (400-539)||(30581481-30581624)
chr4 (151-243)||(16870646-16870738)
chr4 (406-540)||(3580862-3580994)
chr4 (474-541)||(17315390-17315457)
chr4 (383-529)||(7038041-7038188)
chr4 (476-541)||(43035224-43035289)
chr4 (381-445)||(32484307-32484371)
chr4 (381-448)||(28494222-28494289)
chr4 (187-345)||(54147571-54147730)
chr4 (474-541)||(54640431-54640498)
chr4 (381-477)||(36816381-36816478)
chr4 (385-477)||(12711450-12711542)
chr4 (381-458)||(33836484-33836563)
chr4 (423-532)||(32629308-32629418)
chr4 (387-541)||(36589720-36589876)
chr4 (384-446)||(38755908-38755970)
chr4 (447-537)||(51420553-51420646)
chr4 (400-478)||(16494258-16494338)
chr4 (384-448)||(11394923-11394987)
chr4 (384-448)||(11404650-11404714)
chr4 (477-541)||(12257688-12257752)
chr4 (421-541)||(44357196-44357319)
chr4 (387-490)||(12047721-12047823)
chr4 (437-538)||(49938491-49938594)
chr4 (487-541)||(5313099-5313153)
chr4 (471-541)||(41549358-41549428)
chr4 (438-526)||(10379997-10380086)
chr4 (381-434)||(35532077-35532130)
chr4 (384-445)||(40553937-40553998)
chr4 (384-445)||(44718641-44718702)
chr4 (382-435)||(56322984-56323037)
chr4 (31-90)||(16871155-16871215)
chr4 (384-477)||(48327763-48327858)
chr4 (140-203)||(54147869-54147933)
chr4 (295-354)||(16870561-16870620)
chr4 (14-94)||(16871004-16871086)
chr4 (20-95)||(16871079-16871150)
chr4 (437-508)||(17079704-17079777)
chr4 (384-446)||(25388249-25388311)
chr4 (169-230)||(42265431-42265492)
chr4 (381-446)||(8820581-8820646)
chr4 (425-507)||(14783722-14783806)
chr4 (193-246)||(24225498-24225551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (382-541)||(30555-30714)
[»] chr3 (83 HSPs)
chr3 (385-541)||(22122918-22123074)
chr3 (382-541)||(1217088-1217247)
chr3 (384-540)||(39203515-39203671)
chr3 (380-541)||(40272808-40272971)
chr3 (383-538)||(13628789-13628948)
chr3 (384-509)||(31592879-31593004)
chr3 (381-541)||(13730599-13730763)
chr3 (385-541)||(22609764-22609921)
chr3 (381-541)||(26869705-26869866)
chr3 (381-541)||(26573125-26573287)
chr3 (381-541)||(46421031-46421196)
chr3 (383-541)||(12914034-12914194)
chr3 (385-541)||(7696893-7697044)
chr3 (383-541)||(29366719-29366881)
chr3 (381-536)||(7942993-7943150)
chr3 (380-490)||(15797271-15797381)
chr3 (381-541)||(52926216-52926369)
chr3 (381-541)||(8247683-8247848)
chr3 (383-541)||(16735439-16735598)
chr3 (396-541)||(6411834-6411980)
chr3 (382-540)||(34420641-34420802)
chr3 (382-531)||(516417-516571)
chr3 (384-509)||(10795423-10795552)
chr3 (382-481)||(34771362-34771461)
chr3 (382-499)||(54484730-54484850)
chr3 (401-540)||(9607202-9607345)
chr3 (382-538)||(5173717-5173876)
chr3 (381-540)||(25944468-25944630)
chr3 (382-489)||(26292382-26292489)
chr3 (382-541)||(53996563-53996725)
chr3 (384-507)||(14986989-14987116)
chr3 (437-541)||(45620881-45620988)
chr3 (380-524)||(54374341-54374488)
chr3 (437-541)||(4495717-4495823)
chr3 (406-537)||(30928169-30928302)
chr3 (400-528)||(33926094-33926224)
chr3 (380-496)||(49013469-49013589)
chr3 (457-541)||(10870025-10870110)
chr3 (396-537)||(45948850-45948996)
chr3 (396-541)||(19731000-19731147)
chr3 (385-541)||(33235528-33235687)
chr3 (379-493)||(45786209-45786327)
chr3 (380-459)||(24577917-24577996)
chr3 (423-528)||(45139515-45139624)
chr3 (419-493)||(47624088-47624163)
chr3 (149-374)||(50295452-50295677)
chr3 (386-477)||(353351-353444)
chr3 (381-532)||(12525414-12525567)
chr3 (136-230)||(42530741-42530835)
chr3 (437-528)||(54032612-54032705)
chr3 (406-533)||(8410889-8411016)
chr3 (385-500)||(31904857-31904975)
chr3 (383-541)||(25517169-25517332)
chr3 (430-537)||(39211992-39212101)
chr3 (467-541)||(53062036-53062112)
chr3 (396-541)||(19751576-19751723)
chr3 (380-459)||(24578007-24578086)
chr3 (384-497)||(31831241-31831343)
chr3 (381-450)||(24851298-24851367)
chr3 (383-444)||(30452892-30452953)
chr3 (430-507)||(55401208-55401288)
chr3 (474-541)||(35417914-35417981)
chr3 (398-506)||(43114882-43114994)
chr3 (409-508)||(9276289-9276395)
chr3 (439-520)||(52428532-52428616)
chr3 (382-541)||(44403553-44403715)
chr3 (149-265)||(46692047-46692165)
chr3 (444-541)||(21875018-21875111)
chr3 (380-501)||(50624949-50625072)
chr3 (420-539)||(1121260-1121382)
chr3 (393-500)||(31672732-31672842)
chr3 (444-541)||(28904941-28905041)
chr3 (396-541)||(829454-829601)
chr3 (381-426)||(6242282-6242327)
chr3 (431-533)||(29106555-29106659)
chr3 (474-541)||(9627713-9627780)
chr3 (474-541)||(26782364-26782431)
chr3 (59-94)||(42530844-42530879)
chr3 (381-432)||(47624208-47624259)
chr3 (34-89)||(50295873-50295928)
chr3 (380-417)||(4495672-4495709)
chr3 (383-435)||(10484615-10484667)
chr3 (381-417)||(40390365-40390401)
[»] chr5 (74 HSPs)
chr5 (383-530)||(32703411-32703558)
chr5 (381-541)||(35710289-35710449)
chr5 (382-541)||(8169982-8170141)
chr5 (383-541)||(41014295-41014454)
chr5 (383-541)||(38879557-38879719)
chr5 (381-541)||(24448866-24449028)
chr5 (383-541)||(4619103-4619265)
chr5 (382-541)||(43334178-43334341)
chr5 (387-502)||(7368413-7368528)
chr5 (384-541)||(1565407-1565566)
chr5 (406-541)||(27328728-27328867)
chr5 (383-539)||(22861668-22861823)
chr5 (454-541)||(37024626-37024713)
chr5 (406-541)||(22600430-22600567)
chr5 (384-508)||(13801767-13801895)
chr5 (383-541)||(28516432-28516593)
chr5 (198-383)||(11335393-11335572)
chr5 (407-541)||(2838754-2838890)
chr5 (384-540)||(22187262-22187422)
chr5 (384-478)||(34154814-34154908)
chr5 (380-534)||(1405170-1405326)
chr5 (381-541)||(19142940-19143101)
chr5 (385-537)||(12006329-12006485)
chr5 (396-506)||(43574617-43574729)
chr5 (406-539)||(24323727-24323862)
chr5 (406-539)||(24360351-24360486)
chr5 (396-541)||(208939-209086)
chr5 (384-493)||(7097760-7097870)
chr5 (384-492)||(16880647-16880757)
chr5 (385-498)||(20135623-20135740)
chr5 (396-533)||(1850624-1850762)
chr5 (383-459)||(16957374-16957450)
chr5 (421-541)||(39301099-39301222)
chr5 (474-541)||(23974756-23974823)
chr5 (424-532)||(22907904-22908014)
chr5 (388-539)||(30006303-30006456)
chr5 (396-477)||(9794390-9794471)
chr5 (21-98)||(11335279-11335355)
chr5 (137-242)||(11335361-11335466)
chr5 (383-477)||(3771381-3771475)
chr5 (381-443)||(16028621-16028683)
chr5 (383-497)||(29334415-29334532)
chr5 (396-525)||(42924842-42924977)
chr5 (445-541)||(31299608-31299705)
chr5 (424-509)||(41425956-41426043)
chr5 (164-230)||(9511813-9511880)
chr5 (168-265)||(9511742-9511845)
chr5 (406-537)||(34074584-34074717)
chr5 (20-96)||(9511882-9511961)
chr5 (384-502)||(5873322-5873441)
chr5 (384-443)||(30877564-30877623)
chr5 (252-374)||(9511703-9511825)
chr5 (487-541)||(17419890-17419944)
chr5 (384-499)||(12575660-12575779)
chr5 (385-426)||(19438759-19438800)
chr5 (396-464)||(13774920-13774988)
chr5 (474-522)||(22025538-22025586)
chr5 (383-435)||(32354211-32354263)
chr5 (57-92)||(11335165-11335200)
chr5 (283-354)||(24136719-24136790)
chr5 (168-251)||(11335424-11335510)
chr5 (149-230)||(24136896-24136978)
chr5 (384-446)||(25622533-25622595)
chr5 (491-541)||(39079875-39079925)
chr5 (383-444)||(39801591-39801652)
chr5 (395-447)||(4654426-4654478)
chr5 (474-537)||(10634238-10634301)
chr5 (380-469)||(11657695-11657785)
chr5 (381-454)||(10943842-10943914)
chr5 (20-61)||(11335350-11335391)
chr5 (406-457)||(10306496-10306548)
chr5 (386-418)||(11462926-11462958)
chr5 (149-204)||(24136984-24137040)
chr5 (167-230)||(24137051-24137114)
[»] chr2 (89 HSPs)
chr2 (383-537)||(21779260-21779414)
chr2 (384-541)||(23397742-23397899)
chr2 (383-541)||(9671156-9671315)
chr2 (383-541)||(8455315-8455475)
chr2 (381-541)||(25249735-25249896)
chr2 (384-539)||(10543676-10543835)
chr2 (384-541)||(14530294-14530455)
chr2 (381-526)||(14444720-14444866)
chr2 (383-541)||(11514412-11514571)
chr2 (383-541)||(24200622-24200784)
chr2 (381-526)||(10546153-10546301)
chr2 (420-541)||(12023955-12024077)
chr2 (378-541)||(17667978-17668143)
chr2 (400-540)||(99281-99421)
chr2 (380-537)||(19977710-19977869)
chr2 (382-541)||(27573597-27573757)
chr2 (393-541)||(32781298-32781447)
chr2 (378-541)||(17623540-17623705)
chr2 (419-541)||(22371033-22371154)
chr2 (381-501)||(36871509-36871629)
chr2 (383-539)||(5841006-5841166)
chr2 (381-541)||(7214510-7214674)
chr2 (384-541)||(25079717-25079877)
chr2 (384-541)||(14544039-14544201)
chr2 (382-541)||(17896235-17896397)
chr2 (383-541)||(39914305-39914465)
chr2 (406-541)||(21377095-21377232)
chr2 (429-539)||(5450263-5450376)
chr2 (406-541)||(33795261-33795398)
chr2 (381-502)||(30826052-30826173)
chr2 (381-541)||(24859985-24860145)
chr2 (381-532)||(25641487-25641639)
chr2 (384-541)||(40416871-40417030)
chr2 (382-539)||(31158437-31158598)
chr2 (383-541)||(44643498-44643659)
chr2 (187-374)||(1173572-1173760)
chr2 (387-541)||(4516354-4516510)
chr2 (406-537)||(17380259-17380391)
chr2 (384-497)||(40762234-40762349)
chr2 (422-541)||(23145736-23145857)
chr2 (422-541)||(23557526-23557647)
chr2 (447-541)||(17705471-17705567)
chr2 (380-540)||(45235813-45235976)
chr2 (381-508)||(15296403-15296533)
chr2 (395-528)||(19614981-19615117)
chr2 (406-541)||(44521395-44521532)
chr2 (384-477)||(25632551-25632644)
chr2 (382-541)||(26684618-26684781)
chr2 (464-539)||(44604832-44604908)
chr2 (445-541)||(29419946-29420048)
chr2 (158-243)||(8986208-8986293)
chr2 (385-506)||(13245096-13245210)
chr2 (396-507)||(17471558-17471673)
chr2 (406-502)||(30864439-30864536)
chr2 (440-523)||(2003592-2003678)
chr2 (397-477)||(24890453-24890533)
chr2 (396-532)||(31821355-31821491)
chr2 (34-98)||(38584002-38584066)
chr2 (149-300)||(1173471-1173620)
chr2 (383-444)||(34080176-34080237)
chr2 (191-243)||(38584195-38584247)
chr2 (385-445)||(40579750-40579810)
chr2 (381-445)||(41409936-41410000)
chr2 (394-477)||(39499240-39499323)
chr2 (381-435)||(39189501-39189555)
chr2 (397-450)||(4794871-4794924)
chr2 (383-465)||(23488535-23488619)
chr2 (57-94)||(29409360-29409397)
chr2 (397-454)||(31523296-31523353)
chr2 (20-98)||(38583953-38584027)
chr2 (168-232)||(38584136-38584201)
chr2 (187-227)||(32290604-32290644)
chr2 (380-444)||(34766330-34766394)
chr2 (486-541)||(35017793-35017849)
chr2 (283-370)||(38584256-38584344)
chr2 (420-528)||(44449419-44449529)
chr2 (383-540)||(4795730-4795891)
chr2 (384-435)||(8575979-8576030)
chr2 (295-354)||(8986123-8986182)
chr2 (444-506)||(12315712-12315775)
chr2 (387-454)||(31525771-31525838)
chr2 (149-242)||(38584085-38584180)
chr2 (14-93)||(8986474-8986555)
chr2 (383-432)||(22371199-22371248)
chr2 (479-540)||(34752759-34752820)
chr2 (57-94)||(38583918-38583955)
chr2 (63-99)||(1173233-1173269)
chr2 (198-238)||(32290558-32290598)
chr2 (252-312)||(32290584-32290644)
[»] scaffold0187 (2 HSPs)
scaffold0187 (386-541)||(10052-10207)
scaffold0187 (386-541)||(20380-20535)
[»] scaffold0223 (1 HSPs)
scaffold0223 (384-541)||(11108-11264)
[»] scaffold0258 (1 HSPs)
scaffold0258 (382-541)||(13022-13182)
[»] scaffold0015 (1 HSPs)
scaffold0015 (383-508)||(48633-48758)
[»] scaffold1176 (1 HSPs)
scaffold1176 (388-541)||(1591-1744)
[»] scaffold0057 (5 HSPs)
scaffold0057 (381-541)||(46807-46969)
scaffold0057 (381-541)||(24769-24926)
scaffold0057 (383-504)||(43672-43794)
scaffold0057 (379-472)||(46702-46796)
scaffold0057 (494-540)||(46995-47041)
[»] scaffold0049 (1 HSPs)
scaffold0049 (384-541)||(58953-59114)
[»] scaffold0311 (1 HSPs)
scaffold0311 (383-541)||(10786-10946)
[»] scaffold0180 (1 HSPs)
scaffold0180 (381-471)||(24130-24220)
[»] scaffold0254 (1 HSPs)
scaffold0254 (415-540)||(4134-4264)
[»] scaffold0005 (2 HSPs)
scaffold0005 (437-541)||(226458-226565)
scaffold0005 (425-507)||(55924-56008)
[»] scaffold0036 (1 HSPs)
scaffold0036 (437-531)||(35070-35167)
[»] scaffold0018 (1 HSPs)
scaffold0018 (384-509)||(72867-72995)
[»] scaffold0167 (1 HSPs)
scaffold0167 (406-526)||(23590-23712)
[»] scaffold0194 (1 HSPs)
scaffold0194 (381-539)||(24642-24786)
[»] scaffold0031 (1 HSPs)
scaffold0031 (437-541)||(43105-43209)
[»] scaffold0954 (1 HSPs)
scaffold0954 (396-501)||(3560-3667)
[»] scaffold0116 (1 HSPs)
scaffold0116 (474-541)||(8867-8934)
[»] scaffold0024 (1 HSPs)
scaffold0024 (489-540)||(83852-83903)
[»] scaffold0050 (1 HSPs)
scaffold0050 (384-454)||(58630-58699)
[»] scaffold0867 (1 HSPs)
scaffold0867 (400-508)||(3685-3793)
[»] scaffold0028 (1 HSPs)
scaffold0028 (444-541)||(32906-33005)


Alignment Details
Target: chr8 (Bit Score: 129; Significance: 2e-66; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 12670247 - 12670407
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  12670247 aaaaaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 12670346  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  12670347 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 12670407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 30454094 - 30454254
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||||| |||||| |||||||||    
T  30454094 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgttttaca 30454193  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  30454194 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 30454254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 2626657 - 2626495
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-----tttta 478  Q
    ||||||||| ||||||||||  ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||     |||||    
T  2626657 aaagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgttttttttta 2626558  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  2626557 cacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacc 2626495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 36720932 - 36720772
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttaca 480  Q
    |||||||||||| ||||||||| |||| |||||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||  |||||||    
T  36720932 aaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttaca 36720833  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  36720832 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 36720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 28817624 - 28817785
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttac 479  Q
    ||||||||||||| | ||||||| ||||||||||||  ||||||| |||||||| |||||||||| |||||||||||||||| |||||||||  ||||||    
T  28817624 aaaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttac 28817723  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  28817724 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 28817785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 13160836 - 13160678
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacaca 482  Q
    ||||||||||| || |||||  ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  13160836 aaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacaca 13160737  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  13160736 agaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactttacc 13160678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 17823711 - 17823552
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacac 481  Q
    ||||||||||| ||||||||| |||||| |||||| ||||||  |||||||| | ||||||||||||||||| |||||||||||| ||||  ||||||||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacac 17823612  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  17823611 aagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacc 17823552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 380 - 541
Target Start/End: Complemental strand, 35261818 - 35261655
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||||  ||||||| ||||||||||||||||||||||||||  |||||||||  ||||    
T  35261818 taaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttt 35261719  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| ||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||    
T  35261718 acacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttacc 35261655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 384 - 539
Target Start/End: Original strand, 29521685 - 29521842
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacac 481  Q
    |||| |||||| ||||||||| ||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||  ||||| ||    
T  29521685 aaagagcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaac 29521784  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||    
T  29521785 aagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaacttta 29521842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 385 - 541
Target Start/End: Complemental strand, 45071398 - 45071241
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaa 483  Q
    |||||||||| ||||||||  ||||||||||||  || |||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 45071299  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||| |||||||||||  ||||| || |||||||||||||||||||||    
T  45071298 gaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttacc 45071241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 39460993 - 39461155
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| || |||||||  ||||||||||||||||| ||||| |||||||  |    
T  39460993 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgtttttta 39461092  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  39461093 cacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttacc 39461155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 407 - 541
Target Start/End: Original strand, 20869523 - 20869655
Alignment:
Q  407 gctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttccaggacttgaac 506  Q
    |||||||||||| ||||||| |||||||| || ||||  |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgttttacacaagaggctgtttccaggacttgaac 20869620  T
Q  507 ccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||  ||||||||||||||||||||||||||||||    
T  20869621 ccgtgacctttcagtcacatgacaacaactttacc 20869655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 7136524 - 7136688
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctg--ttt 476  Q
    ||||||||| |||| ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||  |||    
T  7136524 aaaaaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttt 7136623  T
Q  477 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||| ||||||||||||||||||||   ||||| ||||||||||||||||||||||||    
T  7136624 tacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttacc 7136688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 8897761 - 8897923
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgtttta 478  Q
    |||||||||||||| |||||| || ||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| || |||||||  | |||||    
T  8897761 aaaaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctatttttta 8897860  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| || |||||||||||||| ||||||  ||||| | ||||||||||||||||||||||    
T  8897861 cacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttacc 8897923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 6760962 - 6760798
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt- 477  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| | |||||| ||||||||||  |||||||||||||| || |||||||||||||     
T  6760962 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttt 6760863  T
Q  478 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     ||||||||||||||||||||||||||||||||  |||||  ||||| |||||||||||||||||    
T  6760862 tacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttacc 6760798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 26954271 - 26954108
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--- 477  Q
    ||||||||||||  |||||||| ||||||||||||| |  ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||       
T  26954271 aaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttt 26954172  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||||    
T  26954171 acacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacc 26954108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 44530285 - 44530125
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttaca 480  Q
    |||||| ||||| ||||||||| ||||||||||||  |||||||  ||||||| ||||||||||||||||||||||||||| |||||||||  |||||||    
T  44530285 aaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttaca 44530186  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| |||||||| ||||||||||||  |||||  |||||||||||| ||||||||||    
T  44530185 caagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttacc 44530125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 382 - 537
Target Start/End: Original strand, 18164758 - 18164914
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-aca 480  Q
    ||||| ||||||| ||||||||| ||||||||||||  ||||||| |||||  | || || | ||||||||||||||||||  ||||||||||||| |||    
T  18164758 aaaaatggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtttttaca 18164857  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  18164858 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactt 18164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 12626026 - 12625865
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttac 479  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||   ||||||    
T  12626026 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttac 12625927  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| |||||||||||||||| ||||  ||||   ||||||| |||||||||||||||    
T  12625926 acaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttacc 12625865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 390 - 541
Target Start/End: Original strand, 20284075 - 20284232
Alignment:
Q  390 caacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt----acacaa 483  Q
    ||||| ||||||||| | ||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||| ||||    | ||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaa 20284174  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  20284175 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 390 - 541
Target Start/End: Original strand, 21070703 - 21070861
Alignment:
Q  390 caacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt-----acaca 482  Q
    ||||| ||||||||| | ||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||| ||||     | |||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttataca 21070802  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  21070803 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 21070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 383 - 535
Target Start/End: Complemental strand, 31457308 - 31457155
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccct-gttttacac 481  Q
    |||||||||| | ||||||||||||||||||||||  |||||| ||||||||| ||| |||||||| |||||||||||||| |||  |||  ||||||||    
T  31457308 aaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctatttttacac 31457209  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaac 535  Q
    |||||| ||||| |||||||||||||||  ||||||||| ||||||||||||||    
T  31457208 aagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 541
Target Start/End: Original strand, 44781517 - 44781665
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgt--tttacacaagaggctgtt 492  Q
    |||||||| ||||||||||||  |||||||||||| ||| ||||| |||||  |||||||||||| ||| ||||||||||  ||||||||||||| ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  493 tccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||  | ||||||||||| ||||||||||||||||    
T  44781617 tccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc 44781665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 25250661 - 25250498
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt-- 477  Q
    ||||||||||||| ||||||||| | ||||||||||| | ||||  |||||||| ||||||||||  ||||||||||||||||| | |||||| ||||      
T  25250661 aaaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctatttttt 25250562  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| ||||||||||||||||||||||  |  ||||| ||||||||||||||||||||||||    
T  25250561 acacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttacc 25250498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 540
Target Start/End: Original strand, 24365081 - 24365218
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttacacaagaggctgtttccaggactt 502  Q
    ||||||| ||||  ||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||   ||||||||||||||||||||| ||| |||    
T  24365081 agctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggctt 24365180  T
Q  503 gaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||||||  || ||| ||||||||||||||||||||||    
T  24365181 gaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 383 - 496
Target Start/End: Complemental strand, 19729476 - 19729363
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||| |  ||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||||||||| |    
T  19729476 aaaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacata 19729377  T
Q  483 agaggctgtttcca 496  Q
    |||| |||||||||    
T  19729376 agagactgtttcca 19729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 386 - 500
Target Start/End: Complemental strand, 29877227 - 29877111
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaa 483  Q
    |||||| ||||||||||||  |||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaa 29877128  T
Q  484 gaggctgtttccaggac 500  Q
     ||||||||||||||||    
T  29877127 aaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 509
Target Start/End: Original strand, 5135288 - 5135416
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttacc--ctgttttac 479  Q
    |||||||||| || ||||||| | |||||| |||||  ||||||| |||||||| ||||||||||||||||||||||| ||| ||||||  || ||||||    
T  5135288 aaaaagggcagcccggtgcacaa-agctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttac 5135386  T
Q  480 acaagaggctgtttccaggacttgaacccg 509  Q
    ||||||||||||||||||||||||||||||    
T  5135387 acaagaggctgtttccaggacttgaacccg 5135416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 20870063 - 20869941
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctg--ttt 476  Q
    |||||||||||||| ||||||||| ||||||||||||| | |||||  ||||||| |||||||||  |||||||||||||||||| |||||||||  |||    
T  20870063 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 20869964  T
Q  477 tacacaagaggctgtttccagga 499  Q
    |||||||||| ||||||||||||    
T  20869963 tacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 396 - 508
Target Start/End: Original strand, 8483950 - 8484064
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgttt 493  Q
    ||||| ||| ||||||||||||  |||||||||||| ||| |||||||| |||||||||||||||||| ||| |||||  |||||||||||||| |||||    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgttt 8484049  T
Q  494 ccaggacttgaaccc 508  Q
    |||||||||||||||    
T  8484050 ccaggacttgaaccc 8484064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 518
Target Start/End: Complemental strand, 389768 - 389642
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt----acacaagaggctgt 491  Q
    ||||||||| ||||| ||||||  ||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||||    |||||||||| |||    
T  389768 ggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgt 389669  T
Q  492 ttccaggacttgaacccgcaacctttc 518  Q
    ||||||||||||||||||  |||||||    
T  389668 ttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 491
Target Start/End: Complemental strand, 16225156 - 16225045
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctg--ttttac 479  Q
    ||||| ||||| ||||||||| ||||||||||||| | ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||    
T  16225156 aaaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttac 16225057  T
Q  480 acaagaggctgt 491  Q
    | ||||||||||    
T  16225056 ataagaggctgt 16225045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 28407538 - 28407392
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acaca 482  Q
    ||||||||||| |||||| || ||||||||||||   |||||| |||||||| |||||||||||||||             ||||||||||||| |||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatttggtgc------------cttaccctgtttttacaca 28407451  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  28407450 agaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 28407392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 393 - 541
Target Start/End: Complemental strand, 22598282 - 22598133
Alignment:
Q  393 cctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctg 490  Q
    |||||||||||| || |||||||||  || |||| ||||| || || ||||| ||||||||||||||  || |||||||||||||  |||||||||| ||    
T  22598282 cctggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttg 22598184  T
Q  491 tttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| |||||||||  ||||||||||||  ||||||||||||||||    
T  22598183 tttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 398 - 541
Target Start/End: Original strand, 42083712 - 42083858
Alignment:
Q  398 tgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccc--tgttttacacaagaggctgtttc 494  Q
    ||||||| ||||||| | || |||||||  |||||||| ||||||||||| ||| || ||||||||| ||| |||  | |||||||||| ||||||||||    
T  42083712 tgcactaaagctcccacgtacacagggttcgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttc 42083811  T
Q  495 caggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||  ||||||||||||| ||||||||| ||||||    
T  42083812 caggacttgaacccgtgacctttcagtcacgtgacaacaattttacc 42083858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 24245562 - 24245427
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccattt---ggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttccaggactt 502  Q
    ||||||||||||  |||||||  ||||||| |||||| ||||   |||| |||||||| ||||||||||||||  ||| ||||| | |||||||||||||    
T  24245562 agctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgtt--acataagagac-gtttccaggactt 24245466  T
Q  503 gaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  24245465 gaacccgtgacctttcagtcacatgacaacaactttacc 24245427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 26102655 - 26102578
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgta 458  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||||    
T  26102655 aaaaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 428 - 531
Target Start/End: Original strand, 23000263 - 23000365
Alignment:
Q  428 gggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    |||||||| |||||||||||||||||||||| | |  |||||| |||||| |||||||||||||||||||||||||  |||||  |||||||||||||||    
T  23000263 gggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt--acccgtgacctttcagtcacat 23000360  T
Q  527 gacaa 531  Q
    |||||    
T  23000361 gacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 437 - 538
Target Start/End: Complemental strand, 35106006 - 35105902
Alignment:
Q  437 tcccaccatt-tggtgtattgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaaca 533  Q
    |||||||||| ||||||||||||||||| ||||| || |  ||||||||||||| |||||||||||||||||||||  ||||||||| ||| ||||||||    
T  35106006 tcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaaca 35105907  T
Q  534 acttt 538  Q
    |||||    
T  35105906 acttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 406 - 541
Target Start/End: Original strand, 11000971 - 11001109
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggactt 502  Q
    |||||| ||||| |||||||  ||| |||| ||||||||||||||||||||||| ||| |||| | ||||||   |||||  ||| ||||| ||| | ||    
T  11000971 agctcctgcataaacagggttcgggtaggggtcccaccatttggtgtattgtacacagccttatcttgtttttttacacagtaggttgttttcagaattt 11001070  T
Q  503 gaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  11001071 gaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 396 - 508
Target Start/End: Complemental strand, 5689754 - 5689640
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgttt 493  Q
    ||||||||| ||||||| ||||  || |||  |||||||| | ||||||||||||||||||||||||| |||||||||  |||||||||||||||| |||    
T  5689754 ggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctattt 5689655  T
Q  494 ccaggacttgaaccc 508  Q
     || |||||||||||    
T  5689654 acaagacttgaaccc 5689640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 500
Target Start/End: Complemental strand, 10857966 - 10857845
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---tttta 478  Q
    ||||||||||||| ||||||||| ||||||||||||  || ||||  ||||| | |||||||| |||||||||||| ||||| |||||||||   |||||    
T  10857966 aaaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgttttttta 10857867  T
Q  479 cacaagaggctgtttccaggac 500  Q
    |||||||||| |||||| ||||    
T  10857866 cacaagaggcggtttcctggac 10857845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 541
Target Start/End: Original strand, 14017990 - 14018128
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggactt 502  Q
    |||| |||||| | |||||||  ||||| | |||||||| ||| |||||||||||||||||| ||||||||||  ||||||||| ||||||||| |||||    
T  14017990 agctaccgcatctgcagggtccaggaagtggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagactt 14018089  T
Q  503 gaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||   |||||||| |||| |||||||||| |||||    
T  14018090 gaacccatgacctttcaatcacgtgacaacaacattacc 14018128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 452 - 534
Target Start/End: Complemental strand, 11748366 - 11748282
Alignment:
Q  452 tattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 534  Q
    |||||||||| |||||||||||  ||||||| ||||||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  11748366 tattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaa 11748282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 20242142 - 20242063
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaac 228  Q
    ||||||||||||  ||||||||||||||||||| ||   |||||||||||||||||||||||| ||||||| ||||||||    
T  20242142 gaatcaaaaggggagaagaaaccaaattgtgagcacacgctcaccaaacaaccaaagtgtgagaactcgactcaccaaac 20242063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 20250925 - 20251004
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaac 228  Q
    ||||||||||||  ||||||||||||||||||| ||   |||||||||||||||||||||||| ||||||| ||||||||    
T  20250925 gaatcaaaaggggagaagaaaccaaattgtgagcacacgctcaccaaacaaccaaagtgtgagaactcgactcaccaaac 20251004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 20242050 - 20241956
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagt 243  Q
    ||||||||||||  ||||||||||||||||||| ||   ||||||||||||||||| |||||| ||||||| |||||||||| | |||| |||||    
T  20242050 gaatcaaaaggggagaagaaaccaaattgtgagcacacgctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaattatgagt 20241956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 20251017 - 20251111
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagt 243  Q
    ||||||||||||  ||||||||||||||||||| ||   ||||||||||||||||| |||||| ||||||| |||||||||| | |||| |||||    
T  20251017 gaatcaaaaggggagaagaaaccaaattgtgagcacacgctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaattatgagt 20251111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 437 - 491
Target Start/End: Original strand, 23286378 - 23286432
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgt 491  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  23286378 tcccaccatttggtgtattgtacgcagctttaccctgttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 474 - 538
Target Start/End: Original strand, 30962865 - 30962929
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    ||||||||||||||||||||||||||||||||  ||  |||||||| ||||||||||||||||||    
T  30962865 ttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 40604905 - 40605064
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgttttaca 480  Q
    ||||||||||   ||||||||| ||||||||||||   ||||| | ||||||||| ||| ||||| ||||||||||||||  |||| ||  | |||||||    
T  40604905 aaaagggcaattcggtgcactaaagctcccgcatacgtagggtttcggaagggat-ccatcatttagtgtattgtacgcaaccttatccaattttttaca 40605003  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||| ||  |||||||| |||||||||||  || | | || |||||||||||||||||||||    
T  40605004 caaaagattgtttccatgacttgaacccataatcatccaatcacatgacaacaactttacc 40605064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 539
Target Start/End: Complemental strand, 36918261 - 36918102
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttac 479  Q
    ||||||| ||||||  |||| || ||||| |||||| | ||||| |||||||| |||| || |||||||||||||||| ||| |||||||||  ||||||    
T  36918261 aaaaaggacaaccttttgcattaaagctctcgcatacatagggtttgggaaggaatcctactatttggtgtattgtacacagccttaccctgttttttac 36918162  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    | ||||   ||||||||| ||||||||  |  ||||||||||  ||| ||||||| ||||    
T  36918161 ataagaaattgtttccagaacttgaacatgtgacctttcagttccataacaacaatttta 36918102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 462
Target Start/End: Complemental strand, 16013593 - 16013511
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgca 462  Q
    ||||||| ||||| ||||||||| ||||||||||||  |||||||||||||||| || |||||  ||| ||||||||||||||    
T  16013593 aaaaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 506
Target Start/End: Original strand, 17250888 - 17251001
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtt 492  Q
    |||||||| ||||||  ||||  ||||||  ||||| || ||||||||||  ||||||||||||||| | |||| ||||||||  ||||||||||||| |    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgct 17250987  T
Q  493 tccaggacttgaac 506  Q
    ||||||||||||||    
T  17250988 tccaggacttgaac 17251001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 493
Target Start/End: Complemental strand, 43942421 - 43942348
Alignment:
Q  424 gtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgttt 493  Q
    |||||||||||| |||||||||||  |||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  43942421 gtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagaggctgttt 43942348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 541
Target Start/End: Original strand, 44742564 - 44742678
Alignment:
Q  430 gaagggatcccaccattt-ggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||  ||||||||| |||  ||||||||| |||||||| |   ||||| || ||||      
T  44742564 gaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgc 44742663  T
Q  527 gacaacaactttacc 541  Q
    |||||||||||||||    
T  44742664 gacaacaactttacc 44742678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 20241947 - 20241863
Alignment:
Q  283 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaa 367  Q
    ||||| ||||| ||||||| |||||||||| |||   |||||||| ||||| |||||||||||||| ||||| |||| |||||||    
T  20241947 accaaacaaacgaacaaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaacaaaactaaatcaa 20241863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 367
Target Start/End: Original strand, 20251120 - 20251204
Alignment:
Q  283 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaa 367  Q
    ||||| ||||| ||||||| |||||||||| |||   |||||||| ||||| |||||||||||||| ||||| |||| |||||||    
T  20251120 accaaacaaacgaacaaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaacaaaactaaatcaa 20251204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 35107310 - 35107374
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 447  Q
    |||||||||||| ||||||||| |||| ||||||| |||| ||| |||||||| |||||||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 20242371 - 20242315
Alignment:
Q  20 gggagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaat 76  Q
    |||| ||||| ||||||||||| |||||||| |||| |||||||||||| |||||||    
T  20242371 gggataagtgcaatcaatcaaaagaatcaaaagggggagaagtgcaatgaaatcaat 20242315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 20250789 - 20250845
Alignment:
Q  20 gggagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaat 76  Q
    |||| ||||| ||||||||||| |||||||| |||| |||||||||||| |||||||    
T  20250789 gggataagtgcaatcaatcaaaagaatcaaaagggggagaagtgcaatgaaatcaat 20250845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 433
Target Start/End: Original strand, 27468089 - 27468141
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaag 433  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| ||||||    
T  27468089 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 20242235 - 20242153
Alignment:
Q  149 gaatcaaaagggag-gaagaaaccaaattgtgagtac-ttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    |||||||||||| | ||||||||||||||||||| ||  ||||||||| ||||||||| |||||| |||| || ||||||||||    
T  20242235 gaatcaaaagggggagaagaaaccaaattgtgagcacactactcaccagacaaccaaa-tgtgagaactctactcaccaaacaa 20242153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 472
Target Start/End: Complemental strand, 26457864 - 26457776
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccct 472  Q
    ||||| || |||| ||||||||| ||||||| ||||  || |||| ||  |||| |||||||| |||||||||||||||||| ||||||||    
T  26457864 aaaaaaggaaacccggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccaccaattggtgtattgtacgcagccttaccct 26457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 23286337 - 23286379
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtc 426  Q
    |||||||| || ||||||||||||||||||||||| |||||||    
T  23286337 aaagggcagcccggtgcactagagctcccgcatatgcagggtc 23286379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 32041388 - 32041340
Alignment:
Q  68 gcaatcaatcagaagaatcaaaagggggagagacaatcaaacagaagaa 116  Q
    ||||||||||| |||||| || |||| ||||||||||||| ||||||||    
T  32041388 gcaatcaatcataagaataaatagggagagagacaatcaatcagaagaa 32041340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 2e-66; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 1347100 - 1346940
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  1347100 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 1347001  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  1347000 caagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 1346940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 1354756 - 1354914
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  1354756 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 1354855  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  1354856 agaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttacc 1354914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 382 - 534
Target Start/End: Original strand, 29355853 - 29356009
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgttt--t 477  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| ||||||||||||  |    
T  29355853 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctt 29355952  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 534  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29355953 acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 12221913 - 12222076
Alignment:
Q  383 aaaagggcaacctggtgcactaga-gctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt-- 477  Q
    |||||||||||| ||||||||| | |||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||      
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 12222012  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  12222013 acacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 12222076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 9161262 - 9161099
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt- 477  Q
    |||||||||||||||||||||||| |||| |||||||  ||||||| | |||||| ||||||||||  || |||||||||||||| ||||| |||||||     
T  9161262 aaaaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgttttt 9161163  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  9161162 acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 380 - 540
Target Start/End: Original strand, 2166406 - 2166570
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgt--t 475  Q
    ||||||||||||||| ||||||||| |||||||| ||||| |||||| |||||||| ||||||||||  ||||||||||||||||  |||| |||||  |    
T  2166406 taaaaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatt 2166505  T
Q  476 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  2166506 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2166570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 380 - 540
Target Start/End: Original strand, 2178039 - 2178203
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgt--t 475  Q
    ||||||||||||||| ||||||||| |||||||| ||||| |||||| |||||||| ||||||||||  ||||||||||||||||  |||| |||||  |    
T  2178039 taaaaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtatt 2178138  T
Q  476 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  2178139 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 382 - 499
Target Start/End: Complemental strand, 26097295 - 26097178
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||  ||||||||||||||||||||| |||||||||||||||||    
T  26097295 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgttttacac 26097196  T
Q  482 aagaggctgtttccagga 499  Q
    ||||||||||||||||||    
T  26097195 aagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 382 - 499
Target Start/End: Complemental strand, 25557860 - 25557743
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| | ||  ||||||||||||||||||||| |||||||||||||||||    
T  25557860 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgttttacac 25557761  T
Q  482 aagaggctgtttccagga 499  Q
    ||||||||||||||||||    
T  25557760 aagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 383 - 539
Target Start/End: Complemental strand, 28007761 - 28007604
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    ||||||| || | |||||||||||||| ||||||||  ||| |  |||||||| ||||| ||||||||||||||||||||| || |||||||||||||||    
T  28007761 aaaagggtaatccggtgcactagagcttccgcatatggaggtta-gggaaggggtcccagcatttggtgtattgtacgcagcctgaccctgttttacaca 28007663  T
Q  483 agaggctgtttccaggacttgaacccgcaacc-tttca-gtcacatgacaacaacttta 539  Q
    ||||||| |||||||||||||||||||  ||| ||||| ||||||||||||||||||||    
T  28007662 agaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaacaacttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 391 - 541
Target Start/End: Original strand, 3815084 - 3815236
Alignment:
Q  391 aacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggc 488  Q
    |||| ||||||||| |||| |||||||   |||||  ||||| || ||||||||||||||||||||||||||||| |||| | ||||  |||||| || |    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtc 3815183  T
Q  489 tgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  3815184 tgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttacc 3815236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 391 - 507
Target Start/End: Complemental strand, 32579553 - 32579436
Alignment:
Q  391 aacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccct-gttttacacaagaggct 489  Q
    ||||||| | |||| ||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| |||||| |  ||||| || |||||||    
T  32579553 aacctggagtactaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgtatttttataccagaggct 32579454  T
Q  490 gtttccaggacttgaacc 507  Q
    ||||||||||||||||||    
T  32579453 gtttccaggacttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 1941993 - 1941831
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    |||||||||||||  ||||||| | | |||||||||| ||| | ||  ||| ||| |||||||||| |||||||||||||||| |||||||||  |||||    
T  1941993 aaaaaagggcaacacggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgtttttta 1941894  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| ||||| || ||||| || |||| ||||| |||||| |||||||||||||||||    
T  1941893 cacaagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaacaactttacc 1941831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 531
Target Start/End: Original strand, 23240837 - 23240971
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttcca 496  Q
    |||||||| ||||||||||||  ||  |||   |||||| |||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgttttacacaagaggctgtttcca 23240936  T
Q  497 ggacttgaacccgcaacctttcagtcacatgacaa 531  Q
    ||||||| ||| |  ||||||||||||| ||||||    
T  23240937 ggacttgcacctgtgacctttcagtcacgtgacaa 23240971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 383 - 540
Target Start/End: Original strand, 32728156 - 32728314
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaa-gggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||||| |||||||||| || |||||||||   |||||||||||| ||||  |||| ||||||| |||||||| |||||||||||||||||  ||    
T  32728156 aaaagggcaacatggtgcactaaagttcccgcatacgtagggtctgggaaaggga--ccactatttggtatattgtacacagtcttaccctgttttttac 32728253  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    | |||||| ||||||||  ||||||| | |  |||||||||||||||||||||||||||||    
T  32728254 ataagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 381 - 532
Target Start/End: Original strand, 18277190 - 18277343
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    |||||||| ||||| |||||| || ||||||||||||   || |||| ||||||| ||||||||||||||||  ||||| ||  |||||||||  |||||    
T  18277190 aaaaaaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgattttta 18277289  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 532  Q
    |||||||||||||||||| || |||||||||  |||||| ||||||| ||||||    
T  18277290 cacaagaggctgtttccaagatttgaacccgtgaccttttagtcacaggacaac 18277343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 451 - 541
Target Start/End: Complemental strand, 8409311 - 8409219
Alignment:
Q  451 gtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||| |||  ||||||||||||||| ||||||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttacc 8409219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 439 - 541
Target Start/End: Original strand, 13905034 - 13905138
Alignment:
Q  439 ccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaact 536  Q
    ||||||||||||| |||||| |||| |||||||||||||  ||||||||||  |||| |||||||||| ||||  |||||||||||||||||||||||||    
T  13905034 ccaccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaact 13905133  T
Q  537 ttacc 541  Q
    |||||    
T  13905134 ttacc 13905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 14553626 - 14553488
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggact 501  Q
    |||||||||||| |||||||||  |||||| ||||||||  ||||||||||| ||| ||| |||||||| ||||  |||||||| ||| |||||||||||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  502 tgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| |  |||||| |||||||||||||||||||||||    
T  14553526 tgaacctgtgaccttt-agtcacatgacaacaactttacc 14553488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 397 - 541
Target Start/End: Original strand, 15866052 - 15866196
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac--aagaggctgtttc 494  Q
    |||||||| || ||||||| |  ||||||| |||||||| |||||||||||||||||||  ||||||  ||||||||||||  ||  |||||||||||||    
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttc 15866149  T
Q  495 caggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||| ||||||||   |||||||| ||||||| |||||||||||||    
T  15866150 caggaattgaacccatgacctttcaatcacatgccaacaactttacc 15866196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 541
Target Start/End: Complemental strand, 24097716 - 24097557
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    ||||||||||||||||||  ||||| |||| |||||||  ||||||| |||||||| |||||||||||||    ||||| |||| |||||||||  ||||    
T  24097716 taaaaaagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttgg----ttgtaagcagccttaccctgtttttt 24097621  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    | ||||||||||| ||| ||||||| ||| ||  |||||||||| |||||||| ||| ||||||    
T  24097620 atacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgacatcaattttacc 24097557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 446 - 541
Target Start/End: Complemental strand, 6024306 - 6024209
Alignment:
Q  446 ttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||||||| |||| ||||| |||  ||||| || |||||||||||||||||||||    
T  6024306 ttggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttacc 6024209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 7947371 - 7947531
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctg--ttttaca 480  Q
    |||||||| ||  |||||||| ||||||| ||||  || |||| ||||||||  |||||||||| |||||||||||||||| |||||||||  |||||||    
T  7947371 aaagggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttaca 7947470  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || |||| ||||||||||| ||||||| |  |||||||||||||   ||| ||||||||||    
T  7947471 caggaggttgtttccaggagttgaaccggtgacctttcagtcacgcaacaccaactttacc 7947531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 33138956 - 33138841
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgttt 493  Q
    ||||||||| |||| | ||||| |||||||| || || || ||||||||||||||||||||||||| | ||||| |||  ||||| |||||||| |||||    
T  33138956 ggtgcactaaagctactgcatacacagggtccggaaaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgttt 33138857  T
Q  494 ccaggacttgaacccg 509  Q
    ||||||||||||||||    
T  33138856 ccaggacttgaacccg 33138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 14975172 - 14975239
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||| |||  ||||| ||||||||||||||||||||||||    
T  14975172 ttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttacc 14975239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 374
Target Start/End: Complemental strand, 21862034 - 21861943
Alignment:
Q  283 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaactgaac 374  Q
    ||||| |||||||||||||||||||||||  |||   |||||||||||| | ||||| |||||||| |||||||||||||||||||||||||    
T  21862034 accaaacaaacaaacaaaccaattgtgagaactattttgactcactcaaaaaccaaataaattgaaccaaacgaaaccaaatcaaactgaac 21861943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 541
Target Start/End: Original strand, 2755422 - 2755583
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgc--atatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgttttac- 479  Q
    |||||||||| ||||||||| |||||||||  |||| |||| | ||||||||  |||||||||||  |||||||||||||||| |||| ||| ||||       
T  2755422 aagggcaacc-ggtgcactaaagctcccgcgcatatgcaggatttgggaaggactcccaccatttttggtgtattgtacgcagccttagcctatttttgg 2755520  T
Q  480 -acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     | |||||| ||||| || ||||||||||  | ||||||||||||||||||||||||||||||    
T  2755521 tataagaggatgtttgcaagacttgaacctacgacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 12889562 - 12889402
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--aca 480  Q
    |||||||| || | ||||||| ||||||| || | | |||||| || ||||| ||||| | ||| ||||||||||| |||| ||| |||||||||  |||    
T  12889562 aaagggcagcccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatcgtttaggtgtattgtatgcagccttgccctgtttttaaca 12889463  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| || |||||||||| |  |||||||| |||| ||||||||||||||||    
T  12889462 caagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 20400742 - 20400643
Alignment:
Q  444 atttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| ||||| |||||||||||||||||||||||  |||||||||  ||||||||  ||||||||| |  ||||||||||||||||||||||||| ||||    
T  20400742 atttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactatacc 20400643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 446
Target Start/End: Complemental strand, 6808532 - 6808468
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 446  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||| |||||||| ||||||||||    
T  6808532 aaaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 462
Target Start/End: Complemental strand, 12892147 - 12892064
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgca 462  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| |||||||||  |||||||||| ||||||    
T  12892147 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 12886049 - 12885967
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcag 463  Q
    |||||||||||| ||||||||| ||||||| ||||  |||||||||||||||| ||||||||  ||| |||||||||||||||    
T  12886049 aaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 462
Target Start/End: Original strand, 23930126 - 23930205
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgca 462  Q
    |||||||||||  ||||||||| ||||||||||||  ||||||| | |||||| ||||||||| ||||||||||||||||    
T  23930126 aaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 456
Target Start/End: Complemental strand, 13267862 - 13267788
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattg 456  Q
    ||||||||||||| ||||||||  ||||||||||||  |||||||  ||||||| ||||||||||||||||||||    
T  13267862 aaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 461
Target Start/End: Original strand, 383760 - 383837
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgc 461  Q
    ||||||||||| |||| |||  ||||||||||||  ||||||||| |||||| |||||| ||||||||||||||||||    
T  383760 aaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 21862137 - 21862044
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgag 242  Q
    ||||||||||||  ||||||||||||||||||| ||   |||| |||||||||||| |||||| | ||||| |||||||||| | |||||||||    
T  21862137 gaatcaaaaggggagaagaaaccaaattgtgagcacacgctcaacaaacaaccaaaatgtgagaattcgactcaccaaacaagcaaattgtgag 21862044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 522
Target Start/End: Original strand, 3116126 - 3116263
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctgtttta 478  Q
    |||||||||||| | |||| |||| ||||||||||||  || |||| | |||||| ||||||||  ||||||||||||| ||||||| |      |||||    
T  3116126 aaaaaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtcat------tttta 3116219  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtc 522  Q
     |||||||| |||||||| |||||||||||   |||||||||||    
T  3116220 tacaagaggttgtttccatgacttgaacccatgacctttcagtc 3116263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 474 - 539
Target Start/End: Complemental strand, 12063510 - 12063445
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||| |||||||||| |||| ||||||||||||||  ||||||||||| ||||| ||||||||||    
T  12063510 ttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaacttta 12063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 22860814 - 22860737
Alignment:
Q  14 aaaggagggagaagtgtaat-caatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaatcaaaa 90  Q
    ||||| |||||||||| ||| |||||| | |||||||| |||  ||||||||||||||||||| ||||||||||||||    
T  22860814 aaaggggggagaagtgcaatgcaatcagaagaatcaaaagggagagaagtgcaatgcaatcaaacagaagaatcaaaa 22860737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 525
Target Start/End: Complemental strand, 17432483 - 17432332
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg--gtgtattgtacgcagtcttaccctg-------- 473  Q
    ||||||||||| ||||||||| |||||||||||  ||||| || |||||  | || ||||||||   ||||||||||| ||| ||||||||             
T  17432483 aaagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgtt 17432384  T
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 525  Q
    |||||||||||| | ||||||||||||||||||| |  ||||||||||||||    
T  17432383 ttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 24734676 - 24734609
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||| |||||| |||| ||||||     ||||||||||||||||||||||||||||||    
T  24734676 ttttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttacc 24734609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 27855500 - 27855597
Alignment:
Q  447 tggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| ||||||| |||||||| ||||   ||||| || ||||||| | |||||| ||| ||| || ||||||||||||||||| |||||||||    
T  27855500 tggtgtattatacgcagccttaccctatttttttacacaggaagctgttttcgggacttaaactcgcgacatttcagtcacatgacaaaaactttacc 27855597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 541
Target Start/End: Complemental strand, 11849145 - 11849031
Alignment:
Q  428 gggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcac 524  Q
    |||||||| ||||||||||| ||||||||||  |||   ||| ||||||||  |||||||||| ||||||| |||||||||||   ||| ||||||||||    
T  11849145 gggaaggggtcccaccattttggtgtattgtgggcaactttatcctgtttttaacacaagaggttgtttcctggacttgaacc--aaacatttcagtcac 11849048  T
Q  525 atgacaacaactttacc 541  Q
     |||||| |||||||||    
T  11849047 gtgacaataactttacc 11849031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 508
Target Start/End: Original strand, 15865893 - 15865982
Alignment:
Q  420 cagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttacacaagaggctgtttccaggacttgaaccc 508  Q
    |||||||  ||||||| ||||||||||||||||||  |||||||  ||||||||   ||||||  |||||||||||||||||| ||||||||    
T  15865893 cagggtccaggaaggggtcccaccatttggtgtat--tacgcagctttaccctgtttttttacgtaagaggctgtttccaggaattgaaccc 15865982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 22860952 - 22860875
Alignment:
Q  20 gggagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaatcaaaagggggaga 98  Q
    ||||||| || ||||||||  | ||| |||| |||| |||||||||||||||||||||| ||||||||| |||||||||    
T  22860952 gggagaaatgcaatcaatcggaagaaccaaaagggg-agaagtgcaatgcaatcaatcaaaagaatcaatagggggaga 22860875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 28063624 - 28063691
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagta-cttactcaccaaacaaccaaagtgtgagcactcg 217  Q
    |||||||||||||| |||||||||||||||||| | || ||||||||||||||| || ||||||||||||    
T  28063624 gaatcaaaagggag-aagaaaccaaattgtgagcacctgactcaccaaacaacc-aattgtgagcactcg 28063691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 13167366 - 13167330
Alignment:
Q  336 caaacaaattgaatcaaacgaaaccaaatcaaactga 372  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13167366 caaacaaattgaaccaaacgaaaccaaatcaaactga 13167330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 418
Target Start/End: Complemental strand, 25997786 - 25997750
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatat 418  Q
    ||||||||||||| |||||||||||||||||||||||    
T  25997786 aaaaagggcaacccggtgcactagagctcccgcatat 25997750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 18981413 - 18981350
Alignment:
Q  22 gagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaat 85  Q
    |||||||| ||||||||| | |||||||| || | | |||||||||||||||||||| ||||||    
T  18981413 gagaagtgcaatcaatcagaagaatcaaaaggagaaaaagtgcaatgcaatcaatcaaaagaat 18981350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 539
Target Start/End: Complemental strand, 22967287 - 22967149
Alignment:
Q  408 ctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtac------gcagtcttaccctgtttt-acacaagaggctgtttccaggac 500  Q
    ||||||||||  |||||||   |||||| ||||||||||||||||||||||       |||| |||| ||| |||| |||||||| | |||||||| |||    
T  22967287 ctcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgtatttgtatgcagccttatcctatttttacacaagaagttgtttccatgac 22967188  T
Q  501 ttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||||  |  ||||| |||||||||||||| |||||||    
T  22967187 ttgaactagtgaccttacagtcacatgacaataacttta 22967149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 539
Target Start/End: Original strand, 23821106 - 23821244
Alignment:
Q  408 ctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtac------gcagtcttaccctgtttt-acacaagaggctgtttccaggac 500  Q
    ||||||||||  |||||||   |||||| ||||||||||||||||||||||       |||| |||| ||| |||| |||||||| | |||||||| |||    
T  23821106 ctcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgtatttgtatgcagccttatcctatttttacacaagaagttgtttccatgac 23821205  T
Q  501 ttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||||  |  ||||| |||||||||||||| |||||||    
T  23821206 ttgaactagtgaccttacagtcacatgacaataacttta 23821244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 20906783 - 20906837
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 435  Q
    ||||||| ||||| |||| ||||| ||||||||||||| | ||||||||||||||    
T  20906783 aaaaaagagcaacttggttcactaaagctcccgcatatgcggggtctgggaaggg 20906837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 8417501 - 8417448
Alignment:
Q  488 ctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| ||| ||||| ||  || |||||||||||||||||||||||||||    
T  8417501 ctgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttacc 8417448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 13167411 - 13167366
Alignment:
Q  187 actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaac 232  Q
    ||||||||||||| |||| || ||||||| ||||||||||||||||    
T  13167411 actcaccaaacaagcaaattgcgagcacttgacccaccaaacaaac 13167366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 10741569 - 10741501
Alignment:
Q  165 agaaaccaaattgtgagtact-tactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaac 232  Q
    |||||||||||||||||||||  ||||||| |||||||||||||    |||  ||||||||||||||||    
T  10741569 agaaaccaaattgtgagtactcgactcaccgaacaaccaaagtgctcacacctgacccaccaaacaaac 10741501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 21862313 - 21862246
Alignment:
Q  163 gaagaaaccaaattgtgagtact-tactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    ||||||||||||||||||| |||  |||||||||||||||||| ||||||  || ||| ||||||||||    
T  21862313 gaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa-tgtgagagctagactcaccaaacaa 21862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 22860903 - 22860838
Alignment:
Q  31 aatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaatcaaaagggggagaga 100  Q
    ||||||||||| |||||||  |||| ||||||||||||     ||||||||||||||||| |||||||||    
T  22860903 aatcaatcaaaagaatcaatagggggagaagtgcaatg----gaatcagaagaatcaaaaaggggagaga 22860838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 322 - 374
Target Start/End: Original strand, 28063793 - 28063844
Alignment:
Q  322 actcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaactgaac 374  Q
    ||||||  |||| |||||||| ||||| |||||||||||||||||||||||||    
T  28063793 actcacctaacaaccaaacaa-ttgaaccaaacgaaaccaaatcaaactgaac 28063844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 541
Target Start/End: Original strand, 33922927 - 33922987
Alignment:
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||  ||||| |||||||||||| |  || ||||||||| |||||||||||||||||    
T  33922927 caagaggacgtttctaggacttgaacctgtgacttttcagtcaaatgacaacaactttacc 33922987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 99)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 21172008 - 21172166
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  21172008 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 21172107  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  21172108 agaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttacc 21172166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 32758397 - 32758237
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  32758397 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttaca 32758298  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  32758297 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 32758237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 381 - 535
Target Start/End: Original strand, 42391097 - 42391251
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  42391097 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 42391196  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaac 535  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  42391197 caagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 384 - 540
Target Start/End: Original strand, 10693073 - 10693229
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaa 483  Q
    |||||||||||  |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttacacaa 10693172  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  10693173 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 10693229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 388 - 541
Target Start/End: Original strand, 33871914 - 33872068
Alignment:
Q  388 ggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagag 486  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagag 33872013  T
Q  487 gctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    | |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33872014 gttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacc 33872068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 48735122 - 48735280
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaa 483  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgttttacacaa 48735221  T
Q  484 gaggctgtttcc-aggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  48735222 gaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 48735280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 385 - 541
Target Start/End: Complemental strand, 42477005 - 42476849
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaag 484  Q
    |||||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaag 42476906  T
Q  485 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || |||||||||| ||||||| |||  |||||| |||||||||||||||||||||||    
T  42476905 agactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttacc 42476849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 19426887 - 19427048
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||||| ||||||||  ||||| ||||||| ||||||| | |||||| |||||||||||||||||||||||||||||||||||| ||||  |    
T  19426887 aaaaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccctatttttta 19426985  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  19426986 cacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacc 19427048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 385 - 538
Target Start/End: Complemental strand, 11741927 - 11741774
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaag 484  Q
    |||||||||| ||||||||||||||||||||| | |||  || |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctattttacactag 11741828  T
Q  485 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    | ||||||| ||||||||||||||   |||||||||||||||||||||||||||    
T  11741827 aagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 42805663 - 42805500
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt-- 477  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  ||||||||||||| ||| |||||||||||||      
T  42805663 aaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttttt 42805564  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  42805563 acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 42805500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 47077852 - 47078012
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||| ||||| | |||||||||||||||||||||||  ||||| ||||||||| ||||||||||| ||||||||||||||   |||| || |||||||    
T  47077852 aaaaaaaggcaatccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactctattttaca 47077951  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  47077952 caagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 47078012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 385 - 541
Target Start/End: Original strand, 11617589 - 11617747
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacaca 482  Q
    |||||||||| ||||||||| || ||| |||||  |||||||  ||||||| |||||||||||||||||||||||||||||||||||||  |||||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 11617688  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  11617689 agaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 11617747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 42798806 - 42798645
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttac 479  Q
    ||||||||||||| | ||||||| ||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||| |||||| ||  ||||||    
T  42798806 aaaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttac 42798707  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| ||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||    
T  42798706 acaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttacc 42798645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 2541019 - 2541179
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacac 481  Q
    |||||| |||| ||||||||| ||||||||||||  ||||| | |||||||| |||||||||||||||||| |||||||| |||||||||  ||||||||    
T  2541019 aaagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacac 2541118  T
Q  482 aagaggctgtttccaggacttgaacccgcaaccttt-cagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  2541119 aagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttacc 2541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 27629771 - 27629610
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||||||| ||||||||  |||| |||||||| ||||| | |||||||| ||||||||||||||||||| ||||||  |||||||||||||  ||    
T  27629771 aaaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttac 27629672  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  27629671 acaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttacc 27629610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 34626205 - 34626366
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttac 479  Q
    |||||||||||||| | || |||| ||||||||||||  ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  34626205 aaaaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgtttttac 34626304  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||| |||||||||||||||||||||| | |   ||||||| |||||||||||||||||||||    
T  34626305 acaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttacc 34626366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 22698967 - 22699129
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaag-ggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||| |||| ||||||||| |||||||||||| |||||||| |||||  || |||||||||||  ||||||||||||||||||||||||||||||  |    
T  22698967 aaagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgtttttta 22699066  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| || ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  22699067 cacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaactttacc 22699129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 384 - 538
Target Start/End: Complemental strand, 47716596 - 47716438
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||||| ||||||| | ||||||||||||| | ||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||  ||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 47716497  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||    
T  47716496 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttt 47716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 383 - 520
Target Start/End: Original strand, 31591108 - 31591245
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||||||||||||||||| || |||| |||||||| |||||||||||  |||||||||||||| ||||| ||||||||||||    
T  31591108 aaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctgttttacaca 31591207  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcag 520  Q
    ||||| |||||||||||||||||| ||  |||||||||    
T  31591208 agaggttgtttccaggacttgaactcgtgacctttcag 31591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 386 - 541
Target Start/End: Original strand, 35334818 - 35334973
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaaga 485  Q
    |||| |||| ||||||||| |||||| |||||  ||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||||  ||| ||    
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacacga 35334917  T
Q  486 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    | ||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||    
T  35334918 gactgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttacc 35334973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 43557613 - 43557448
Alignment:
Q  381 aaaaaagggcaacctggtgcactaga-gctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||||||||| ||||||||| | |||||||||||  ||| ||| |||| ||| ||||||||||  ||||||||||||||||| ||||| |||||||    
T  43557613 aaaaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttt 43557514  T
Q  478 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
      |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  43557513 ttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 43557448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 19266563 - 19266426
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttg 503  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||  |||||| |||| |||| ||| |||||||||    
T  19266563 agctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttg 19266464  T
Q  504 aacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||| | ||||||||||||||||||||||||||||||    
T  19266463 aacccacgacctttcagtcacatgacaacaactttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 19265951 - 19265791
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-ac 479  Q
    ||||||||||| || ||||||||| ||||||| |||||  ||| || |||||||| ||||||||||||||||||||||||||| |||||||| |||| ||    
T  19265951 aaaaaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttttac 19265853  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||| |||||| |||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  19265852 acaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaactttacc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 13805214 - 13805078
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc-tgttttacacaagaggctgtttccaggacttga 504  Q
    ||||||||||||  |||||||  ||||| | ||||||||||||||||||||||| ||| ||||||| |||||||||| ||||||| ||||||||||||||    
T  13805214 agctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccctgttttacaccagaggctatttccaggacttga 13805115  T
Q  505 acccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||  ||||||||||||||||||||||||||||||    
T  13805114 acccgttacctttcagtcacatgacaacaactttacc 13805078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 23419674 - 23419833
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacac 481  Q
    |||||||| || | ||||||| ||| |||||| |  || ||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  23419674 aaagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacac 23419773  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||| ||||||||| |  |||||| |||||||||||| ||||||||||    
T  23419774 aagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc 23419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 396 - 507
Target Start/End: Original strand, 2662948 - 2663058
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttcc 495  Q
    ||||| ||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  2662948 ggtgcgctagagctcccgcatatgcagggtctgaaaaggg-tcccaccatttggtgtattgtacgcagccttaccctattttacacaagaggctgtttcc 2663046  T
Q  496 aggacttgaacc 507  Q
    ||||||||||||    
T  2663047 aggacttgaacc 2663058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 40464012 - 40463853
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacac 481  Q
    |||||||||||  ||||||||  ||||||||||||  ||||||| | |||||| ||||||||||||||||||| ||||||| ||||||| | ||||||||    
T  40464012 aaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagtttttacac 40463913  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||| ||||||| | ||||||||||||  ||||| ||||||||||||||||||||||||    
T  40463912 aagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaactttacc 40463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 381 - 509
Target Start/End: Complemental strand, 7879776 - 7879646
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    |||||||||||||| ||||||||  ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||| ||  |||||    
T  7879776 aaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttta 7879677  T
Q  479 cacaagaggctgtttccaggacttgaacccg 509  Q
    ||||||||  |||||||||||||||||||||    
T  7879676 cacaagagattgtttccaggacttgaacccg 7879646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 406 - 541
Target Start/End: Original strand, 28362167 - 28362304
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttacc--ctgttttacacaagaggctgtttccaggacttg 503  Q
    ||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||   | ||||||||||||||| ||||| ||||||||    
T  28362167 agctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttg 28362266  T
Q  504 aacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| |  ||||||||| ||||||||||||||||||||    
T  28362267 aacctgtgacctttcagccacatgacaacaactttacc 28362304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 381 - 534
Target Start/End: Original strand, 32233132 - 32233286
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttac 479  Q
    ||||||||||| || ||||||||  ||||||| ||||| |||||| |||||||| |||||||||||||||||| | ||||| | ||||||||| ||||||    
T  32233132 aaaaaagggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttttac 32233231  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 534  Q
    |||||||| ||||||||||||||||||||   ||||||||||||  |||||||||    
T  32233232 acaagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 428 - 541
Target Start/End: Original strand, 14099050 - 14099165
Alignment:
Q  428 gggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 525  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||  |||||| ||||| |||||||||||| |||||   ||||||||||||||    
T  14099050 gggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcaca 14099149  T
Q  526 tgacaacaactttacc 541  Q
    ||||||||||||||||    
T  14099150 tgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 428 - 541
Target Start/End: Original strand, 14409067 - 14409182
Alignment:
Q  428 gggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 525  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||  |||||| ||||| |||||||||||| |||||   ||||||||||||||    
T  14409067 gggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcaca 14409166  T
Q  526 tgacaacaactttacc 541  Q
    ||||||||||||||||    
T  14409167 tgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 385 - 541
Target Start/End: Complemental strand, 29907552 - 29907393
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--acac 481  Q
    |||||||||| ||||||||| ||||||||||||  ||||||| |||| ||| ||||||||||| ||||||||| |||||| ||||| || ||||  ||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacac 29907455  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatg--acaacaactttacc 541  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||  ||||||||||||||    
T  29907454 aagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 408 - 541
Target Start/End: Original strand, 48123508 - 48123643
Alignment:
Q  408 ctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtt--ttacacaagaggctgtttccaggacttgaa 505  Q
    ||||||||||| || ||||  | ||||| |||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  48123508 ctcccgcatatgcatggtccagaaaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaa 48123607  T
Q  506 cccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||   ||||||||| ||||||| ||||||||||||    
T  48123608 cccatgacctttcagacacatgataacaactttacc 48123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 413 - 541
Target Start/End: Complemental strand, 46354302 - 46354170
Alignment:
Q  413 gcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaaccc 508  Q
    |||||| | ||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||||||||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaaccc 46354203  T
Q  509 gcaacctttcagtcacatgacaacaactttacc 541  Q
    |  ||||| || |||||||||||||||||||||    
T  46354202 gtgaccttccaatcacatgacaacaactttacc 46354170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 386 - 518
Target Start/End: Original strand, 18512455 - 18512588
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccct-gttttacacaag 484  Q
    |||||||||  |||||| | ||||||||||||  ||||||| |||||||| |||||||||| |||||||||||||||| ||||||||  |||||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttttacacaag 18512554  T
Q  485 aggctgtttccaggacttgaacccgcaacctttc 518  Q
    | | |||||||||||||||||||||  |||||||    
T  18512555 atgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 385 - 531
Target Start/End: Complemental strand, 18747621 - 18747472
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttacac 481  Q
    ||||||| || ||||||||| ||||||||||||  ||||||   ||||||| |||||||| |||||||||| ||||||| |||||||||   ||||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacac 18747522  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 531  Q
    || |||||||||||| ||||||| ||||  ||||||||||||| ||||||    
T  18747521 aaaaggctgtttccaagacttgatcccgtgacctttcagtcacgtgacaa 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 429 - 541
Target Start/End: Complemental strand, 7645047 - 7644932
Alignment:
Q  429 ggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 525  Q
    ||||||| |||||| |||| ||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||||||||     
T  7645047 ggaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacg 7644948  T
Q  526 tgacaacaactttacc 541  Q
    | ||||||| ||||||    
T  7644947 ttacaacaaatttacc 7644932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 445 - 541
Target Start/End: Original strand, 5180218 - 5180316
Alignment:
Q  445 tttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| |||||| |||||||||||||||||  |||||||||||||||||||| | ||||||||   ||||||||||||||||||||||||||||||    
T  5180218 tttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttacc 5180316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 541
Target Start/End: Original strand, 3469176 - 3469338
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctg----tttta 478  Q
    ||||||||||  | |||||| |||||||||||| ||||||||| ||||||| |||| |||  ||||||||||||||||||  | |||||||    |||||    
T  3469176 aagggcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgtttttttta 3469275  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||  |||||| |||||||||  | |  ||||||||||||||||||||||||||||||    
T  3469276 cacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 439 - 540
Target Start/End: Complemental strand, 6736969 - 6736867
Alignment:
Q  439 ccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    |||||||||||||||||||| ||||||||||| |||||| | |||||||| |||||  ||||||||||||||  ||||||||||| ||||||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactt 6736870  T
Q  538 tac 540  Q
    |||    
T  6736869 tac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 406 - 498
Target Start/End: Complemental strand, 38604639 - 38604546
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagaggctgtttccagg 498  Q
    ||||||||||||  ||||||| || ||||| || |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  38604639 agctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 39124031 - 39123866
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtctt----accctgttt 476  Q
    ||||||||| | |||||||| | ||||||| ||||  ||||||| |||||||| |||||||||||  |||||||| ||||||| |||    |||||||||    
T  39124031 aaaagggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 39123932  T
Q  477 t-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    | ||||||||| | ||||| ||||||||||||||   | |||||||||||||||||||||||||||    
T  39123931 ttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacc 39123866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 381 - 526
Target Start/End: Original strand, 38262193 - 38262340
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttacc--ctgtttta 478  Q
    |||||||||||| | ||||||||| ||||||||||||  ||| ||  |||||||| ||||| |||||||||||||||| |||   |||||   | |||||    
T  38262193 aaaaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatatttttta 38262292  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    |||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  38262293 cacaagagactgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 396 - 541
Target Start/End: Original strand, 14732833 - 14732981
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgttttacacaag--aggctgt 491  Q
    ||||||||| |||||||||||| |||||||  |||||||  |  ||||||||  ||||||||| |||||| |||||||||||||  ||| |  |||||||    
T  14732833 ggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggctgt 14732931  T
Q  492 ttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||   || |||||||||||||||||||||||||||    
T  14732932 ttccaggacttgaacccatgacttttcagtcacatgacaacaactttacc 14732981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 396 - 507
Target Start/End: Complemental strand, 21566559 - 21566445
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtt 492  Q
    ||||||||| ||||||||||||| ||||||  |||||||| ||| |||| ||||||||||||||||||||||| | |||  ||||||||||||||| |||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtt 21566460  T
Q  493 tccaggacttgaacc 507  Q
    |||| ||||||||||    
T  21566459 tccaagacttgaacc 21566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 424 - 541
Target Start/End: Original strand, 8148985 - 8149105
Alignment:
Q  424 gtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcag 520  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||| ||||   ||||||||||  |||| |||||||||||| ||  || || |||    
T  8148985 gtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgactttgcag 8149084  T
Q  521 tcacatgacaacaactttacc 541  Q
    ||||||||||||||| |||||    
T  8149085 tcacatgacaacaacattacc 8149105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 42495917 - 42495994
Alignment:
Q  465 cttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  42495917 cttaccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttacc 42495994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 385 - 541
Target Start/End: Complemental strand, 16341413 - 16341254
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--acac 481  Q
    ||||||| || ||||||| | |||||||||||||    |||| |||||| |  |||||||||| ||||||||||||| || |||||||||||||  ||||    
T  16341413 aagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacac 16341314  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| || |||||||||||  ||||||||   |||||| ||||||||||||    
T  16341313 aagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 406 - 537
Target Start/End: Original strand, 28078154 - 28078286
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttac-acaagaggctgtttccaggacttga 504  Q
    ||||| ||||||| |||| |  |||||||| |||||||||||||||||||| | |||  |||||||||||||   ||| ||| ||||||| |||||||||    
T  28078154 agctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggacttga 28078253  T
Q  505 acccgcaacctttcagtcacatgacaacaactt 537  Q
    |||||  ||||| ||||||||||||||||||||    
T  28078254 acccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 445 - 541
Target Start/End: Complemental strand, 12473378 - 12473280
Alignment:
Q  445 tttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||  |||||||||||||  |||||||||| ||||| ||||||||||||||   |||||||||  |||||||||||||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttacc 12473280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 27889312 - 27889395
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcag 463  Q
    ||||||||||||||| |||| || | ||||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||    
T  27889312 taaaaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcag 27889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 44123713 - 44123780
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  44123713 ttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 383 - 492
Target Start/End: Original strand, 35787268 - 35787378
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacac 481  Q
    |||||||||||| |||||| |  ||||||||||||  || |||| |||||||| |||| |||||||||||||||||||||  |||||| || ||||||||    
T  35787268 aaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgtttttacac 35787367  T
Q  482 aagaggctgtt 492  Q
    |||||||||||    
T  35787368 aagaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 475 - 540
Target Start/End: Complemental strand, 7193127 - 7193062
Alignment:
Q  475 tttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||||||||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttac 7193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 414 - 506
Target Start/End: Original strand, 15108427 - 15108520
Alignment:
Q  414 catatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagaggctgtttccaggacttgaac 506  Q
    |||| ||||||| |||||||||||||||| ||||| |||||||||| ||| |||||| || ||||||||||||  |||||||||||||||||||    
T  15108427 catacacagggtttgggaagggatcccactatttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaac 15108520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 18327087 - 18327010
Alignment:
Q  465 cttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||  |||||  |||||||||||||||||||||||    
T  18327087 cttaccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttacc 18327010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 420 - 505
Target Start/End: Complemental strand, 1408556 - 1408469
Alignment:
Q  420 cagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaa 505  Q
    ||||||| |||||||| |||||||||||| |||||||||| ||| |||||| ||  |||||||||||||||| |||||||||||||||    
T  1408556 cagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 11828573 - 11828653
Alignment:
Q  163 gaagaaaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgag 242  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||| |||| | |||||||||    
T  11828573 gaagaaaccaaattgtgagtacttaactcaccaaacaaccaaaatgtgagcacccgactcaccagacaaccaaattgtgag 11828653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 429 - 519
Target Start/End: Complemental strand, 35203531 - 35203437
Alignment:
Q  429 ggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttca 519  Q
    |||||||||||||||||||  ||| ||||||||||||||||| ||||||||  |||||||||  |||||||||||||||||||||  ||||||||    
T  35203531 ggaagggatcccaccatttttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 7794598 - 7794665
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| ||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||    
T  7794598 ttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttacc 7794665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 44338465 - 44338386
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaac 228  Q
    ||||||||||||  ||||||||||||||||||| ||   |||||||||||||||||||||||| ||||||| ||||||||    
T  44338465 gaatcaaaaggggagaagaaaccaaattgtgagcacacgctcaccaaacaaccaaagtgtgagaactcgactcaccaaac 44338386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 46963788 - 46963895
Alignment:
Q  136 caatcaatcaaaggaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaa 235  Q
    |||||||| | | |||| |||||||  ||||||||||||||||||| || | |||||||||||||||||||||||| | ||||| |||||||||| | ||    
T  46963788 caatcaatgagaagaataaaaaggggagaagaaaccaaattgtgagcacatgctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaa 46963887  T
Q  236 ttgtgagt 243  Q
    || |||||    
T  46963888 ttatgagt 46963895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 383
Target Start/End: Original strand, 11828629 - 11828756
Alignment:
Q  252 actcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatca 351  Q
    |||||||  ||||| |||||||||||||| |||| ||||||| ||||||    |||||||| ||| | || ||||  | |||  ||||||||||||||||    
T  11828629 actcaccagacaaccaaattgtgagcacttgacccaccaaactaacaaa----ttgtgagcactatcttgtctcatcctacaatcaaacaaattgaatca 11828724  T
Q  352 aacgaaaccaaatcaaactgaacgaagctaaa 383  Q
    ||||||||||||||||||||||| || |||||    
T  11828725 aacgaaaccaaatcaaactgaaccaaactaaa 11828756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 25198864 - 25198698
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---tttt 477  Q
    ||||||| |||||| ||||||||| ||||| | ||||   ||||||||||||||||||| ||||||| ||| ||| ||||| |||||||| ||   ||||    
T  25198864 aaaaaagtgcaacccggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccatttagtgcattatacgcggtcttaccttgttttttt 25198765  T
Q  478 acacaagaggctgtttccaggac---ttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| || ||||||||| |||   |||| |||   | |||||||||| |||||||||||||||||    
T  25198764 acacaaaagactgtttccaagactttttgatcccatgatctttcagtcatatgacaacaactttacc 25198698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 44338373 - 44338279
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagt 243  Q
    ||||||||||||  ||||||||||||||||||| ||   ||||||||||||||||| |||||| ||||||| |||||||||| | |||| |||||    
T  44338373 gaatcaaaaggggagaagaaaccaaattgtgagcacacgctcaccaaacaaccaaaatgtgagaactcgactcaccaaacaagcaaattatgagt 44338279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 375
Target Start/End: Complemental strand, 6530647 - 6530526
Alignment:
Q  254 tcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaa 353  Q
    ||||| |||||| ||||||||| || | |||  |||||||| |||||||||||||||   ||| | |||||||| |||||  |||||||||||||  |||    
T  6530647 tcaccaaacaaccaaattgtgaacatttgactcaccaaacagacaaaccaattgtgaatactatcttgactcacccaacaatcaaacaaattgaacaaaa 6530548  T
Q  354 cgaaaccaaatcaaactgaacg 375  Q
    |||| |||||||||||||||||    
T  6530547 cgaatccaaatcaaactgaacg 6530526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 374
Target Start/End: Complemental strand, 21813867 - 21813745
Alignment:
Q  252 actcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatca 351  Q
    ||||||| |||||| ||| |||||||||| |||  |||||||||| ||||||||||||||   || | |||||| |  |||| |||||||||||||| ||    
T  21813867 actcaccaaacaaccaaagtgtgagcacttgactcaccaaacaaataaaccaattgtgaggaatatcttgactcgcctaacaaccaaacaaattgaacca 21813768  T
Q  352 aacgaaaccaaatcaaactgaac 374  Q
    | |||| ||||||||||| ||||    
T  21813767 accgaatccaaatcaaaccgaac 21813745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 541
Target Start/End: Original strand, 42101899 - 42102044
Alignment:
Q  399 gcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctgttttacac--aagaggctgtttcc 495  Q
    |||||| |||| ||| |||  ||||||| ||||| || |||||||| ||| | ||| |||||||||| ||||||||||||  ||  ||||||||||||||    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttcc 42101998  T
Q  496 aggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||     ||||| ||||||| ||||||||||||||||    
T  42101999 aggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 11828629 - 11828693
Alignment:
Q  187 actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatctt 251  Q
    |||||||| ||||||||| |||||||||| |||||||||||| ||| ||||||||| ||||||||    
T  11828629 actcaccagacaaccaaattgtgagcacttgacccaccaaactaacaaattgtgagcactatctt 11828693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 21813887 - 21813823
Alignment:
Q  168 aaccaaattgtgagtactt-actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaa 231  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||| ||| |||||||||||    
T  21813887 aaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcacttgactcaccaaacaaa 21813823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 501
Target Start/End: Complemental strand, 23231680 - 23231573
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt--tttacacaagaggctgttt 493  Q
    ||||||||| |||| |||||||  ||||||  |||||||| ||||| |||| |||||||| ||||||| |||||| | |  ||||||||||||||| |||    
T  23231680 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctcttt 23231581  T
Q  494 ccaggact 501  Q
    ||||||||    
T  23231580 ccaggact 23231573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 21813938 - 21813855
Alignment:
Q  149 gaatcaaaagggag-gaagaaaccaaattgtgagtacttact-caccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    |||||||||||| | ||| ||||||||||||| ||||||| | |||||| |||||||| |||||||||||||| ||||||||||    
T  21813938 gaatcaaaagggggagaaaaaaccaaattgtgggtacttatttcaccaagcaaccaaattgtgagcactcgactcaccaaacaa 21813855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 476
Target Start/End: Original strand, 39093437 - 39093532
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt-tggtgtattgtacgcagtcttaccctgttt 476  Q
    |||||||||| || ||||||||| |||| | |||||| || | || |||||||| |||||| ||| ||||||||||||| ||||||||||||||||    
T  39093437 aaaaagggcagcccggtgcactaaagcttctgcatatgcaagttccgggaagggttcccactattatggtgtattgtacacagtcttaccctgttt 39093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 541
Target Start/End: Original strand, 1423972 - 1424069
Alignment:
Q  446 ttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| |||| ||||  ||||||||||||  |||||| || |||||||||||| ||||| |||  ||||| ||||||||| ||||||||||||||    
T  1423972 ttggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttacc 1424069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 382 - 496
Target Start/End: Original strand, 23618975 - 23619088
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||||| | ||||||| |||||| ||| |  || |||||| |||||| |||||||||||| |||||||||| ||  ||||| |||||||| ||    
T  23618975 aaaaagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtacacaagcttactctgttttatac 23619074  T
Q  482 aagaggctgtttcca 496  Q
     ||||| ||||||||    
T  23619075 -agaggttgtttcca 23619088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 463
Target Start/End: Original strand, 45018923 - 45019006
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca----tttggtgtattgtacgcag 463  Q
    ||||||||||||||||||||| ||||||||||||  ||||||| |||||||| | ||||||    |||||| ||||||||||||    
T  45018923 aaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcag 45019006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 26403195 - 26403154
Alignment:
Q  57 agaagtgcaatgcaatcaatcagaagaatcaaaagggggaga 98  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  26403195 agaagtgcaatgcaatcaatcaaaagaatcaaaagggggaga 26403154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 44338270 - 44338186
Alignment:
Q  283 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaa 367  Q
    ||||| ||||| ||||||| |||||||||| |||   |||||||| ||||| |||||||||||||| ||||| |||| |||||||    
T  44338270 accaaacaaacgaacaaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaacaaaactaaatcaa 44338186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 447
Target Start/End: Complemental strand, 45811985 - 45811919
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 447  Q
    ||||||||||||||| | ||||||| |||||| |||||  |||||||||| |||||||||||||||||    
T  45811985 taaaaaagggcaacccg-tgcactaaagctcctgcataagcagggtctggaaagggatcccaccattt 45811919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 476
Target Start/End: Complemental strand, 33500625 - 33500556
Alignment:
Q  409 tcccgcatatacagggtctgggaagggatcccaccatttg--gtgtattgtacgcagtcttaccctgttt 476  Q
    |||||||||  ||||||| |||||||| |||||||||||   |||||| |||||||||||||||||||||    
T  33500625 tcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgttt 33500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 36602585 - 36602535
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctggga 431  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||||||||    
T  36602585 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 463
Target Start/End: Original strand, 36267829 - 36267897
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaag-ggatcccaccatttggtgtattgtacgcag 463  Q
    ||||||||| |||||||||||| |||||||  |||||  || ||| |||||||||||||||||||||||    
T  36267829 ggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccatttggtgtattgtacgcag 36267897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 44338694 - 44338638
Alignment:
Q  20 gggagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaat 76  Q
    |||| ||||| ||||||||||| |||||||| |||| |||||||||||| |||||||    
T  44338694 gggataagtgcaatcaatcaaaagaatcaaaagggggagaagtgcaatgaaatcaat 44338638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 6530647 - 6530567
Alignment:
Q  189 tcaccaaacaaccaaagtgtgagcactcgacccaccaaaca----aaccaattgtgagtactatctt-actcacccaacaa 264  Q
    |||||||||||||||| ||||| || | ||| |||||||||    |||||||||||| ||||||||| |||||||||||||    
T  6530647 tcaccaaacaaccaaattgtgaacatttgactcaccaaacagacaaaccaattgtgaatactatcttgactcacccaacaa 6530567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 462
Target Start/End: Original strand, 23065924 - 23066003
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgca 462  Q
    |||||||||| | ||||||| | ||||||| ||||| |||| |  || ||||||||||| ||| ||||||||||||||||    
T  23065924 aaaagggcaatccggtgcaccaaagctcccacatatgcaggattcggaaagggatcccatcatatggtgtattgtacgca 23066003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 44338558 - 44338476
Alignment:
Q  149 gaatcaaaagggag-gaagaaaccaaattgtgagtac-ttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    |||||||||||| | ||||||||||||||||||| ||  ||||||||| ||||||||| |||||| |||| || ||||||||||    
T  44338558 gaatcaaaagggggagaagaaaccaaattgtgagcacactactcaccagacaaccaaa-tgtgagaactctactcaccaaacaa 44338476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 46963921 - 46963980
Alignment:
Q  295 aacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaac 354  Q
    |||||||||||||||||| |||   |||||||| ||||| |||||||||||||| |||||    
T  46963921 aacaaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 46963980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 10236481 - 10236423
Alignment:
Q  69 caatcaatcagaagaatcaaaagggggagagacaatcaaacagaagaaaccaatagggg 127  Q
    |||||||| ||||||||||| ||||  |||||| || |||||||||||||||| |||||    
T  10236481 caatcaataagaagaatcaatagggacagagactataaaacagaagaaaccaagagggg 10236423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 21139761 - 21139851
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagag 486  Q
    |||||||| |||| ||||||| |||| ||  |||||||| ||||||||||||||||| ||||  ||  ||||| ||| |||||||||||||    
T  21139761 gtgcactaaagcttccgcatacacagagttcgggaaggggtcccaccatttggtgtactgtatccaaccttactctgtttttacacaagag 21139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 541
Target Start/End: Complemental strand, 22065678 - 22065564
Alignment:
Q  428 gggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    |||||||| || ||| ||||| | ||||||| ||||  ||||||| |||| |||||||||| ||||||||  |||||||| |   || ||||| |||| |    
T  22065678 gggaaggggtctcactatttgctttattgtatgcagctttaccctatttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgt 22065579  T
Q  527 gacaacaactttacc 541  Q
    |||||||||||||||    
T  22065578 gacaacaactttacc 22065564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 46963633 - 46963730
Alignment:
Q  23 agaagtgtaatcaatcaaaggaatcaaatggg-gcagaagtgcaatgcaat-caatcagaagaatcaaaagggggagaga--caatcaaacagaagaa 116  Q
    ||||||| ||||||||| | |||||||| | | | |||||||||||||||| |||||||||||| ||| ||||||||| |  ||||||| ||||||||    
T  46963633 agaagtgcaatcaatcagaagaatcaaaagagtggagaagtgcaatgcaatgcaatcagaagaaccaatagggggagaaatgcaatcaatcagaagaa 46963730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 11828531 - 11828583
Alignment:
Q  68 gcaatcaatcagaagaatcaaaagggggagagacaatcaaacagaagaaaccaa 121  Q
    |||||||| |||||||||||| ||| | | ||||||||||||||||||||||||    
T  11828531 gcaatcaaccagaagaatcaataggagaa-agacaatcaaacagaagaaaccaa 11828583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 539
Target Start/End: Complemental strand, 21447633 - 21447568
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||||||||||||||||||| || |||||||| |||  ||||| || | |||||||||||| ||||    
T  21447633 ttttacacaagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaattta 21447568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 21813963 - 21813922
Alignment:
Q  57 agaagtgcaatgcaatcaatcagaagaatcaaaagggggaga 98  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  21813963 agaagtgcaatggaatcacacagaagaatcaaaagggggaga 21813922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 450
Target Start/End: Original strand, 2257654 - 2257698
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggt 450  Q
    |||||| ||||||||||||||||||||||  ||| ||||||||||    
T  2257654 agctcctgcatatacagggtctgggaaggagtcctaccatttggt 2257698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 15623102 - 15623169
Alignment:
Q  163 gaagaaaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    |||||||| |||||||||| ||| | ||||||||||||||||| |||||| ||| ||| ||||||||||    
T  15623102 gaagaaacaaaattgtgagcactcaactcaccaaacaaccaaa-tgtgagaactagactcaccaaacaa 15623169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 496
Target Start/End: Original strand, 23604553 - 23604612
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttcca 496  Q
    |||||||||||| |||||||| | || |||||||||||||| |||||||||| ||||||||    
T  23604553 tcccaccatttgatgtattgt-cacaatcttaccctgtttttacacaagaggttgtttcca 23604612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 42495865 - 42495917
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcc 439  Q
    |||||||  ||||||||| ||||||||||||  ||||||| ||||||||||||    
T  42495865 gggcaacggggtgcactaaagctcccgcatacgcagggtccgggaagggatcc 42495917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 105)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 34725097 - 34725255
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  34725097 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgttttacaca 34725196  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34725197 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 34725255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 47214670 - 47214510
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||| |    
T  47214670 aaaaaagggtaatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttaaa 47214571  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  47214570 caagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 47214510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 380 - 540
Target Start/End: Original strand, 38478278 - 38478438
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttac 479  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| | |||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  38478278 taaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgttttac 38478377  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||    
T  38478378 acaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttac 38478438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 32632556 - 32632715
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacac 481  Q
    ||||||| |||||||||||||  ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  32632556 aaaagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac 32632655  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  32632656 aagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttacc 32632715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 380 - 541
Target Start/End: Original strand, 46247949 - 46248112
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    ||||||||||||||| ||| ||||| ||||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||    
T  46247949 taaaaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttttt 46248048  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||| ||||||||||||  || |||||||||||||||||||||||||||    
T  46248049 acacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttacc 46248112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 19414596 - 19414438
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||||| |||| ||||||||||| |    
T  19414596 aaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgttttacata 19414497  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| |||| ||||||||||||||  |||||||||||| |||||||||||||||||    
T  19414496 agaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttacc 19414438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 381 - 539
Target Start/End: Original strand, 45812534 - 45812692
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| |||| |||||||| |||||||    
T  45812534 aaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctcttttaca 45812633  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||||| |||||| ||||||||||||| |  ||||||||||||||||||||||||||||    
T  45812634 caagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 45812692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 14617197 - 14617037
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt--tttaca 480  Q
    ||||||| |||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||  |||||| |||  ||||||    
T  14617197 aaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttaca 14617098  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  14617097 caagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 14617037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 382 - 526
Target Start/End: Original strand, 35253185 - 35253329
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  35253185 aaaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 35253284  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    ||||||||||||| ||||||||||||||  | |||||||||||||    
T  35253285 aagaggctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 20004089 - 20004251
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||| ||||||||| ||||||||||||| | |||||||||||||| ||||||||||  ||||||||||||||||| |||||| ||||||  |    
T  20004089 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttttta 20004188  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||| |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  20004189 cacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 20004251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 383 - 540
Target Start/End: Original strand, 12126836 - 12126993
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||   |||||||| ||||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgttttacaca 12126935  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||| ||||||||||| |||| ||||||  |||||||| | ||||||||||||||||||    
T  12126936 agaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttac 12126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 30395725 - 30395887
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||  ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||  |    
T  30395725 aaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 30395824  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||    
T  30395825 cacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttacc 30395887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 380 - 541
Target Start/End: Complemental strand, 46991966 - 46991803
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    |||||| |||||||| ||||||||| ||||||| ||||  ||||||| |||||||| |||||||||| |||||||||||| ||| |||||||||  ||||    
T  46991966 taaaaatgggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgtttttt 46991867  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  46991866 acacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 46991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 18944807 - 18944642
Alignment:
Q  381 aaaaaagggcaacctggtgcactaga-gctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||||||||| ||||||||| | |||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||    
T  18944807 aaaaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtttt 18944708  T
Q  478 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
      ||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||    
T  18944707 ttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttacc 18944642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 398 - 541
Target Start/End: Original strand, 23768334 - 23768479
Alignment:
Q  398 tgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttcc 495  Q
    ||||||| ||||||||||||  |||||||||||||||  ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcc 23768433  T
Q  496 aggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    | |||||||||| |  ||||| ||||||||||||||||||||||||    
T  23768434 atgacttgaacctgtgaccttacagtcacatgacaacaactttacc 23768479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 45402257 - 45402094
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcag-tctt--accctg-ttt 476  Q
    ||||| |||||||| ||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||  |||  |||||| |||    
T  45402257 aaaaacgggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctgtttt 45402158  T
Q  477 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||    
T  45402157 tacacaagaggctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttacc 45402094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 379 - 541
Target Start/End: Complemental strand, 27201812 - 27201646
Alignment:
Q  379 ctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgttt 476  Q
    ||||||||||||||||   ||||||| ||||||||||||  || |||| |||||||| |||||||||||  |||||||||||||||| ||||||||||||    
T  27201812 ctaaaaaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttt 27201713  T
Q  477 t--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
       |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  27201712 ctgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 27201646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 18724543 - 18724704
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    ||||| ||||| | |||||||| | |||||||||||||  |||||| |||||||| |||||  |||||||||||||||| ||| |||||||||||||  |    
T  18724543 aaaaaggggcagcttggtgcacaa-agctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgtttttta 18724641  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  18724642 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 6925261 - 6925099
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||| ||||||  ||||||||| ||||||||||||  ||||| | |||||||| |||||||||| |||||||||| ||||| |||||||| ||||  |    
T  6925261 aaaaaaaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctatttttta 6925162  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  6925161 cacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 6925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 27474439 - 27474280
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acac 481  Q
    |||||||||| | ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  |||||||||||||||  || ||||||||| ||||    
T  27474439 aaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtttttacac 27474340  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||| ||||||||| |||||||||| |  ||||||||||||||||||||||||||||||    
T  27474339 aagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacc 27474280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 41319805 - 41319965
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--aca 480  Q
    ||||||||||||  |||||||  | |||||||||||  |||||  |||||||| ||||| ||||||||||||||||||||| |||||||||||||  |||    
T  41319805 aaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttaca 41319904  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| ||||||||||||||| |||| |  ||||||||||||||||||||||||||||||    
T  41319905 caagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttacc 41319965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 405 - 540
Target Start/End: Original strand, 25468284 - 25468421
Alignment:
Q  405 gagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggactt 502  Q
    |||||||||||||  |||||||||||||| | ||| ||||||||||||||||||||||  |||||||||  |||||||||||||| ||||||||||||||    
T  25468284 gagctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggactt 25468383  T
Q  503 gaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||   |||||||| ||||||||||||||||||||    
T  25468384 gaacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 383 - 526
Target Start/End: Complemental strand, 10668386 - 10668239
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||| ||||||||| ||||||||||||  ||||| | |||||||| ||||||||||  ||||||||||||||||  |||||| ||||||  |    
T  10668386 aaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtttttta 10668287  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  10668286 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 6983810 - 6983968
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    ||||||||| || ||||||| | |||||| || ||  ||||||| || ||||| ||||||||||||||||||||||||||  |||||||||||||  | |    
T  6983810 aaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttata 6983909  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     |||||||||||||||||||||||| |  ||||||||||||| ||||||||||||||||    
T  6983910 cgaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacc 6983968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 11596648 - 11596512
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagaggctgtttccaggacttga 504  Q
    ||||||||||||  |||||||  ||||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||| |||||||||    
T  11596648 agctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttga 11596549  T
Q  505 acccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||  || |||||||||||||||| | ||||||||    
T  11596548 acccgtgacatttcagtcacatgacagccactttacc 11596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 381 - 499
Target Start/End: Original strand, 31382211 - 31382330
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttac 479  Q
    |||||||||||||| ||| || || ||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||| |||| |||| ||||||    
T  31382211 aaaaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttac 31382310  T
Q  480 acaagaggctgtttccagga 499  Q
    ||||||||||||||||||||    
T  31382311 acaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 383 - 524
Target Start/End: Complemental strand, 35005284 - 35005139
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    |||||||||||| ||||||||| ||| ||||||||  ||||||| |||||||| ||||||||  |||||||||||||| |||| |||||||||  |||||    
T  35005284 aaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtttttta 35005185  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcac 524  Q
    ||||||||||||||| || ||||||||||||  |||||||||||||    
T  35005184 cacaagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 420 - 541
Target Start/End: Complemental strand, 20036343 - 20036219
Alignment:
Q  420 cagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt---tttacacaagaggctgtttccaggacttgaacccgcaacctt 516  Q
    ||||||| |||||||| | |||||||||||||||||| ||||| ||||||||| |   ||||||||||||  |||||||||||||||||||||  |||||    
T  20036343 cagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctt 20036244  T
Q  517 tcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||    
T  20036243 tcagtcacatgacaacaactttacc 20036219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 396 - 541
Target Start/End: Original strand, 2435798 - 2435946
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtt 492  Q
    ||||||||| |||||||||||    |||||  || ||||| ||||||||||| |||||||||||||||| |||||||| ||||  ||||| |||||||||    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtt 2435897  T
Q  493 tccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  2435898 tccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 387 - 541
Target Start/End: Original strand, 10378738 - 10378884
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagag 486  Q
    ||||| || ||||||||| ||||||||||||| |||||||   |||||| ||||||||||||||||||||||||||| ||||||||||||| | ||        
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-ctca---- 10378832  T
Q  487 gctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
        ||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  10378833 ---ctttccaggacttgaacccgtaacctttcagtcacgtgacaacaactttacc 10378884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 18741955 - 18742120
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt-- 477  Q
    |||||||| |||| ||||||||| ||||| ||||||  |||||||||||||||| |||||||||||  |||||||||||||||| |||||||||||||      
T  18741955 aaaaagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T
Q  478 -acacaagaggctgtttcc-aggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     | |||| || |||||||| | || ||||||||   ||||||||||||||||||||||||||||||    
T  18742055 tatacaaaagactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttacc 18742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 396 - 541
Target Start/End: Original strand, 35117777 - 35117927
Alignment:
Q  396 ggtgcactagagctcccgcat-atacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgt--tttacacaagaggctg 490  Q
    ||||||||| |||||| |||| |  ||||||| |||||||| ||||| |||||  |||||||||||| ||| ||||||||||  |||||||||||||||     
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggcta 35117876  T
Q  491 tttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  35117877 tttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 381 - 537
Target Start/End: Complemental strand, 8197204 - 8197046
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||||| ||| ||||| ||||||  ||||  ||||||| | |||||| ||| ||||||||||||| |||||| || |||||| ||||||  |    
T  8197204 aaaaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgtttttta 8197105  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    ||||||||||  || ||||||||||||||||  ||||||||||||||||||||||||||    
T  8197104 cacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaactt 8197046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 420 - 541
Target Start/End: Original strand, 22930105 - 22930226
Alignment:
Q  420 cagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttc 518  Q
    |||||||  ||||||| ||||||||||||||||||||| | ||  ||||||||||||| |||||| ||||||||||||||||||||||||   |||||||    
T  22930105 cagggtccaggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttc 22930203  T
Q  519 agtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||    
T  22930204 agtcacatgacaacaactttacc 22930226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 384 - 477
Target Start/End: Complemental strand, 4349796 - 4349703
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 4349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 381 - 498
Target Start/End: Complemental strand, 23796626 - 23796507
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    ||||||||||| || ||||||||| |||||| |||||| |||||||||||||||| || |||||||||||||||||||||||  |||||  ||  |||||    
T  23796626 aaaaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgattttta 23796527  T
Q  479 cacaagaggctgtttccagg 498  Q
    ||||||||||||||||||||    
T  23796526 cacaagaggctgtttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 381 - 540
Target Start/End: Complemental strand, 19701732 - 19701570
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt-- 477  Q
    ||||||||| | |||||||||||| ||||||||||||  ||||||| ||||||||  |||||||||| |||||||||||| ||  ||||||  |||||      
T  19701732 aaaaaagggtagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagtttttt 19701633  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||||||||||||||| || ||||| ||||||  || ||||||||||| ||||||||||||||    
T  19701632 acacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 438 - 541
Target Start/End: Original strand, 4430080 - 4430185
Alignment:
Q  438 cccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaac 535  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||| || ||||| ||||||  ||||| ||||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaac 4430179  T
Q  536 tttacc 541  Q
    ||||||    
T  4430180 tttacc 4430185  T

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Target: chr1; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 383 - 538
Target Start/End: Complemental strand, 9939623 - 9939463
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggga-tcccaccattt--ggtgtattgtacgcagtcttaccctgttt--t 477  Q
    ||||||| |||| ||||||||| ||||||||||||  ||||||| | ||||||  |||||||||||  ||||||||| |||||  |||||| |||||  |    
T  9939623 aaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttctt 9939524  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    | |||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  9939523 aaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 406 - 540
Target Start/End: Original strand, 44485131 - 44485267
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggacttg 503  Q
    ||||||||||||   ||| || |||||||| ||| ||||||||||||||||||||||| |||||| |||  |||||||||| || |||||||||||||      
T  44485131 agctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactat 44485230  T
Q  504 aacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||  |||||||| ||||||||||||||||||||    
T  44485231 aacccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 445 - 538
Target Start/End: Complemental strand, 22327196 - 22327101
Alignment:
Q  445 tttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    ||||||| || |||| ||| |||||||||||||  |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22327196 tttggtgcatcgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 445 - 541
Target Start/End: Original strand, 17470407 - 17470505
Alignment:
Q  445 tttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||   ||| ||||||||| ||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 386 - 541
Target Start/End: Original strand, 19932755 - 19932911
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--acac 481  Q
    |||||||||||||||||||  | ||  |||||  ||||||| |||||||| |||||||||||  |||||||||||||||| |||||||||||||  ||||    
T  19932755 agggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 19932854  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || ||| ||| ||||  ||||||||||   ||||||||||||||||||||||||||||||    
T  19932855 aa-aggttgtatcca--acttgaacccatgacctttcagtcacatgacaacaactttacc 19932911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 437 - 541
Target Start/End: Complemental strand, 33223089 - 33222983
Alignment:
Q  437 tcccaccattt-ggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 534  Q
    ||||||||||| |||||||||||||||  ||| ||||||||| ||||||||||||||||||| ||||| || |||  |||||||||||||||||||||||    
T  33223089 tcccaccattttggtgtattgtacgcaacctttccctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaa 33222990  T
Q  535 ctttacc 541  Q
    |||||||    
T  33222989 ctttacc 33222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 15630025 - 15630108
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtactt-actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaa 231  Q
    ||||||||||||  ||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  15630025 gaatcaaaaggggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaagtgtgagcactcgactcaccaaacaaa 15630108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 35019390 - 35019229
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    |||||| |||| || ||||||||| ||||| ||||||  |||||||||||| ||| |||||||| ||||||||||||| |||| ||||  |||  |||||    
T  35019390 aaaaaatggcagcccggtgcactaaagctctcgcatacgcagggtctgggagggg-tcccaccaattggtgtattgtatgcagccttatactgattttta 35019292  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     |||||||| ||||| ||||||||||| | |  ||||||||||||  ||||||||||||||||    
T  35019291 tacaagaggttgtttacaggacttgaatctgtgacctttcagtcatgtgacaacaactttacc 35019229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 508
Target Start/End: Complemental strand, 22325049 - 22324925
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt-acaca 482  Q
    |||||| |||||||||||| ||||||||||||  ||||||| |||| |||   |||||||||  ||||||||||| |||| ||||||||||||| |||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgtattgtatgcagccttaccctgtttttacaca 22324951  T
Q  483 agaggctgtttccaggacttgaaccc 508  Q
    |||||||||||||| |||||||||||    
T  22324950 agaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 396 - 506
Target Start/End: Original strand, 45264411 - 45264524
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtt 492  Q
    ||||||||| ||||||||||||| ||||||||| |||||| |||||||| |||||||||||| || ||| ||||| |||  |||| ||||||||| ||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  493 tccaggacttgaac 506  Q
    ||||||||||||||    
T  45264511 tccaggacttgaac 45264524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 446 - 541
Target Start/End: Original strand, 50760288 - 50760385
Alignment:
Q  446 ttggtgtattgtacgcagtcttaccctgtttta--cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||| ||||||| ||||||| ||||||  ||||||||||||||| |||||||||||||||  |||| |||||||||||||||| ||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 396 - 541
Target Start/End: Original strand, 27136663 - 27136811
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtt 492  Q
    |||||||| ||||||||||||| ||| | ||| ||||||| |||||||| ||||||||||||||||||  |||||| ||  |||||||||||||| ||||    
T  27136663 ggtgcactggagctcccgcatacacatgatctaggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgtt 27136762  T
Q  493 tccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     |||| |||||||| ||   |||| || |||| ||||||||||||||||    
T  27136763 cccagaacttgaactcgtgtccttccaatcacgtgacaacaactttacc 27136811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 50812100 - 50811938
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--- 477  Q
    |||||||||| ||  ||||| || ||||||||||||  |||||   |||||||| ||| ||||||| |||||||||||||||  |||||||||||||       
T  50812100 aaaaagggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggtcc-accattttggtgtattgtacgcaaccttaccctgttttttt 50812002  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| |||||||||||||| |||  |||  ||||||||||||| ||||||||||||||||    
T  50812001 acacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 1517308 - 1517404
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||||||||| ||||||||| |||||| |||||  ||||||||| |||||| |||||||| |||||||||||||||||| |||| | ||||||    
T  1517308 aaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatcatgtttt 1517404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 476
Target Start/End: Complemental strand, 43768300 - 43768205
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt 476  Q
    ||||||||||| || |||||| || |||||||| |||  |||||||||||||||| |||||||| ||||||||||||| |||| ||||||||||||    
T  43768300 aaaaaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 441 - 541
Target Start/End: Complemental strand, 52910319 - 52910216
Alignment:
Q  441 accatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    |||||| |||||||||||| ||||| |||||||||||   ||  ||||||||||||||| || ||||||| |  ||||||||||||||||||||||||||    
T  52910319 accattaggtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactt 52910220  T
Q  538 tacc 541  Q
    ||||    
T  52910219 tacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 406 - 474
Target Start/End: Complemental strand, 15505700 - 15505632
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt 474  Q
    ||||||||||||  ||||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  15505700 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 2435985 - 2436052
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| |||| |||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  2435985 ttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 2072366 - 2072444
Alignment:
Q  165 agaaaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgag 242  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||||| || ||||||| | |||||||||    
T  2072366 agaaaccaaattgtgagtacataactcaccaaacaaccaaagtatgagcactcgactcatcaaacaatcaaattgtgag 2072444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 386 - 541
Target Start/End: Original strand, 15511150 - 15511310
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgta--cgcagtcttaccctgtttt--aca 480  Q
    |||||| || ||||||||| ||||| | ||||  |||||||  ||||||| | ||||||||| |||||||||||  ||||| |||||||||||||  |||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttaca 15511249  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| ||||||||||||| ||   |  ||||||||| ||||| ||||||||||||||    
T  15511250 caagaggcggtttccaggacttcaatatgtgacctttcagccacattacaacaactttacc 15511310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 540
Target Start/End: Complemental strand, 24564445 - 24564344
Alignment:
Q  441 accatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    ||||||||||| ||||||||||  |||||||||||||  |||||||||| |||||||| |||||||| | || |||||||| ||||| |||| |||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttcaatcacaagacatcaacttt 24564346  T
Q  539 ac 540  Q
    ||    
T  24564345 ac 24564344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 447
Target Start/End: Complemental strand, 50606564 - 50606498
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 447  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||| |||||||||||    
T  50606564 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 540
Target Start/End: Complemental strand, 23371268 - 23371124
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc-tgttttacacaagaggctgtttc 494  Q
    ||||||||| |||| || ||||  |||||||||| ||||| ||||| ||||||||||||||||| ||  ||| ||| | |||||| |||| |||||||||    
T  23371268 ggtgcactaaagctaccacatacgcagggtctgg-aaggggtcccagcatttggtgtattgtacacaaccttgcccgttttttacccaagtggctgtttc 23371170  T
Q  495 caggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
     ||||||||||||||  ||||||||||||   || |||||||||||    
T  23371169 taggacttgaacccgtgacctttcagtcatgcgaaaacaactttac 23371124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 438 - 530
Target Start/End: Original strand, 31272429 - 31272522
Alignment:
Q  438 cccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 530  Q
    ||||||||||| |||  ||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| |  ||||||||||||| |||||    
T  31272429 cccaccatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 540
Target Start/End: Original strand, 39214961 - 39215117
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--acacaa 483  Q
    ||||| || ||||||||| |||| || ||||  |||||| |||||||||  |||||||||| ||  |||||||||||| ||||||| |||||  ||||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaa 39215060  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||| ||||||||| ||||||||  |  |||||| |||||| |||||| ||||||||    
T  39215061 gaggttgtttccagtacttgaacttgggaccttttagtcacgtgacaataactttac 39215117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 398 - 507
Target Start/End: Complemental strand, 43207640 - 43207528
Alignment:
Q  398 tgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttc 494  Q
    ||||||| ||||| |||||| | ||||||||||||| | |||||||| |||||||||||||| || |||||||||||||||  ||| |||||| ||||||    
T  43207640 tgcactaaagctctcgcatacatagggtctgggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctgtttttcacataagaggttgtttc 43207541  T
Q  495 caggacttgaacc 507  Q
    || ||||| ||||    
T  43207540 caagacttaaacc 43207528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 529
Target Start/End: Original strand, 19974073 - 19974221
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt-aca 480  Q
    ||||||||| ||  |||||||| |||||||||||| | || ||| ||||| || ||||| ||||| |||||||||||||||  ||| |||| |||| |||    
T  19974073 aaaagggcagccccgtgcactaaagctcccgcatacatagagtccgggaatgggtcccatcattttggtgtattgtacgcaaccttgccctatttttaca 19974172  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgac 529  Q
    |  ||||||||||||| ||||||||||||  | ||||||||||| ||||    
T  19974173 cttgaggctgtttccaagacttgaacccgtgatctttcagtcacgtgac 19974221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 4249453 - 4249520
Alignment:
Q  394 ctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgc 461  Q
    |||||||| || |||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||    
T  4249453 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 4249777 - 4249844
Alignment:
Q  394 ctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgc 461  Q
    |||||||| || |||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||    
T  4249777 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 4250101 - 4250168
Alignment:
Q  394 ctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgc 461  Q
    |||||||| || |||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||    
T  4250101 ctggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 398 - 498
Target Start/End: Original strand, 34148974 - 34149076
Alignment:
Q  398 tgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt--tacacaagaggctgtttcc 495  Q
    |||||||| ||||| |||||| |||||||  ||||||| || ||||||||||| | |||||||||  |||||||| |||  |||||||||||||||||||    
T  34148974 tgcactagcgctcctgcatatgcagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttcc 34149073  T
Q  496 agg 498  Q
    |||    
T  34149074 agg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 2075896 - 2075974
Alignment:
Q  165 agaaaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgag 242  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||||| |  ||||||| | |||||||||    
T  2075896 agaaaccaaattgtgagtacataactcaccaaacaaccaaagtatgagcactcgactcgtcaaacaaccaaattgtgag 2075974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 25290231 - 25290162
Alignment:
Q  474 ttttacacaagaggctgt--ttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||  ||||| ||||||||| ||  ||||||||||||||||||||||||||||||    
T  25290231 ttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacc 25290162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 477
Target Start/End: Original strand, 42304205 - 42304302
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||||| | ||||||||| ||||||| ||||  ||||||| |||||||| ||||||||  ||| ||||||||||||||  |||||||||||||    
T  42304205 aaaaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgtttt 42304302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 539
Target Start/End: Original strand, 18335305 - 18335445
Alignment:
Q  401 actagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccagg 498  Q
    |||| |||||||| ||| ||| ||||| |||| || ||||| |||||| |||||||||||||   |||||||   ||||| ||||||| |||||||||||    
T  18335305 actaaagctcccgtatacacatggtctaggaaagggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccagg 18335404  T
Q  499 acttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||| |||  |  ||||||||| |||||||||| |||||||    
T  18335405 actttaacttgtgacctttcagacacatgacaaaaacttta 18335445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 510
Target Start/End: Complemental strand, 30682948 - 30682844
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttga 504  Q
    ||||||||||||  || |||| |||||||| |||||||||||| ||||| |||| || ||||||| |||||| |||||||||||| ||| ||||| ||||    
T  30682948 agctcccgcatacgcacggtccgggaaggggtcccaccatttgttgtat-gtacacaatcttaccttgtttttacacaagaggctattttcaggatttga 30682850  T
Q  505 acccgc 510  Q
    ||||||    
T  30682849 acccgc 30682844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 506
Target Start/End: Original strand, 31442396 - 31442515
Alignment:
Q  391 aacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctg---ttttacacaagag 486  Q
    |||| ||||||| | ||||||| |||| |||| ||| |||||||| |||||||| ||||||||||||||||||  |||||||||   ||||||| || ||    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttttttacataaaag 31442495  T
Q  487 gctgtttccaggacttgaac 506  Q
    |||||||| | |||||||||    
T  31442496 gctgtttctaagacttgaac 31442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 439 - 541
Target Start/End: Original strand, 34679274 - 34679378
Alignment:
Q  439 ccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaact 536  Q
    |||||||||| ||||| ||||||||||||||||||  |||||||||||||| |||||| |||| | ||||  |  |  ||||||||||||||||| ||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctaggaatggaacatgtgatatttcagtcacatgacaataact 34679373  T
Q  537 ttacc 541  Q
    |||||    
T  34679374 ttacc 34679378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 15629863 - 15629929
Alignment:
Q  8 agaagcaaaggagggagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatca 74  Q
    |||| ||||||||||||||||| ||||||||||| |||  ||| |||| ||||||||||||||||||    
T  15629863 agaatcaaaggagggagaagtgcaatcaatcaaaagaacaaaaagggggagaagtgcaatgcaatca 15629929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 19825091 - 19825161
Alignment:
Q  173 aattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgag 242  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||| | |||||||| | |||||||||    
T  19825091 aattgtgagcacttaactcaccaaacaaccaaattgtgagcactcgactcgccaaacaaccaaattgtgag 19825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 500
Target Start/End: Original strand, 20169111 - 20169207
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttacc--ctgttttacacaagaggctgtttccaggac 500  Q
    ||||||||||||| ||||||| |||||||  |||||||  |||| ||||||||| ||||||||||   | |||||||||||||| ||||| ||||||    
T  20169111 agctcccgcatatgcagggtccgggaaggagtcccaccgattggggtattgtacacagtcttacctttttttttacacaagagggtgttttcaggac 20169207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 476 - 541
Target Start/End: Complemental strand, 21723727 - 21723663
Alignment:
Q  476 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||| |||||  | |||| | ||||||||||||||||||||||||    
T  21723727 ttacacaagaggctgtttccaggac-tgaacttgtaaccatccagtcacatgacaacaactttacc 21723663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 34714675 - 34714622
Alignment:
Q  488 ctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| ||||||||||||  |||||||| |||||||||||||||||||||    
T  34714675 ctgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttacc 34714622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 2072299 - 2072364
Alignment:
Q  63 gcaatgcaatcaatcagaagaatcaaaagggggagagacaatcaaacagaagaaaccaataggggaag 130  Q
    |||| |||| |||||||||||||||||||||  |||||||| ||||||||||||||||| | ||||||    
T  2072299 gcaaagcaaccaatcagaagaatcaaaaggg--agagacaaccaaacagaagaaaccaagacgggaag 2072364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 2075829 - 2075894
Alignment:
Q  63 gcaatgcaatcaatcagaagaatcaaaagggggagagacaatcaaacagaagaaaccaataggggaag 130  Q
    |||| |||| |||||||||||||||||||||  |||||||| ||||||||||||||||| | ||||||    
T  2075829 gcaaagcaaccaatcagaagaatcaaaaggg--agagacaaccaaacagaagaaaccaagacgggaag 2075894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 434
Target Start/End: Original strand, 19386575 - 19386626
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagg 434  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||| |||||||    
T  19386575 aaaagagcaacctggttcactagagctcccgcatatgcagggtccgggaagg 19386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 28894561 - 28894636
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgca 462  Q
    ||||| |||||||||||| ||||| ||||||| |||||||| ||||||| |   |||||||| |||||||||||||    
T  28894561 gggcagcctggtgcactaaagctctcgcatatgcagggtctaggaaggggttttaccatttgatgtattgtacgca 28894636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 3775100 - 3775226
Alignment:
Q  69 caatcaatcagaagaatcaaaagggggagagacaatcaaacagaagaaaccaataggggaagcaaaccaatcaatcaaaggaatcaaaaggg-aggaaga 167  Q
    ||||| |||||||||||||||| |||||||  ||||||| || ||||| | || ||| | ||  || |||||||||||| |||||||||||| || || |    
T  3775100 caatcgatcagaagaatcaaaatggggagaagcaatcaatcaaaagaatcaaa-aggaggag--aagcaatcaatcaaaagaatcaaaagggcagaaaca 3775196  T
Q  168 aaccaaattgtgagtac-ttactcaccaaa 196  Q
    | ||||||||||||||| ||||||||||||    
T  3775197 atccaaattgtgagtactttactcaccaaa 3775226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 4430008 - 4430078
Alignment:
Q  393 cctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcag 463  Q
    ||||| |||||| |||||||||||| ||||| ||  | ||||| | |||||||||||||||||||||||||    
T  4430008 cctggagcactaaagctcccgcatacacaggatccagaaaggggttccaccatttggtgtattgtacgcag 4430078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 451
Target Start/End: Original strand, 4587568 - 4587630
Alignment:
Q  389 gcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtg 451  Q
    |||||| ||||||||  ||||||||||||  ||||||| |||||||| |||||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatttggtg 4587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 477
Target Start/End: Original strand, 20999849 - 20999943
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||| || ||||||||| ||||||||| ||  ||||||   |||||||  |||| ||||||||||||||||||||| ||| || ||||||    
T  20999849 aaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagccttgccttgtttt 20999943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 499
Target Start/End: Original strand, 44745854 - 44745900
Alignment:
Q  453 attgtacgcagtcttaccctgttttacacaagaggctgtttccagga 499  Q
    |||||||||||  ||||| ||||||||||||||||||||||||||||    
T  44745854 attgtacgcagctttaccttgttttacacaagaggctgtttccagga 44745900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 428 - 477
Target Start/End: Original strand, 21910693 - 21910742
Alignment:
Q  428 gggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||| ||||||||||||||||||||||||||  |||||||| ||||    
T  21910693 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttt 21910742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 496 - 541
Target Start/End: Complemental strand, 40424786 - 40424741
Alignment:
Q  496 aggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||   |||||||||||||||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttacc 40424741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 477
Target Start/End: Complemental strand, 46859172 - 46859131
Alignment:
Q  437 tcccaccattt-ggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  46859172 tcccaccattttggtgtattgtacgcagtcttaccctgtttt 46859131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 2072458 - 2072530
Alignment:
Q  287 accaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaac 359  Q
    ||||||||| ||||||||| |||||| ||| | |||||||| ||||| | ||||||||||||  |||||||||    
T  2072458 accaaacaatcaaaccaatggtgagccctatcttgactcacccaacaactaaacaaattgaactaaacgaaac 2072530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 496
Target Start/End: Complemental strand, 21723784 - 21723728
Alignment:
Q  441 accatttggtgtattgtacgcagtcttaccct-gttttacacaagaggctgtttcca 496  Q
    ||||||||||||||||||| ||| ||||||||  ||||| |||||||||||||||||    
T  21723784 accatttggtgtattgtactcagccttaccctatttttatacaagaggctgtttcca 21723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 25554817 - 25554881
Alignment:
Q  477 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||| |||||||||||||| ||| ||   ||||| |||||| ||||||||||||||||    
T  25554817 tacacaagaggttgtttccaggacttaaacacgtggccttttagtcacgtgacaacaactttacc 25554881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 33594144 - 33594196
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttgg 449  Q
    |||||||| ||||||||||||  |||||||||||||||| |||||||| ||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccaattgg 33594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 539
Target Start/End: Complemental strand, 22151568 - 22151505
Alignment:
Q  476 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||| |||||||||||||||| |||||||||    ||||| |||||| |||||||||||||||    
T  22151568 ttacataagaggctgtttccagaacttgaacctatgaccttacagtcagatgacaacaacttta 22151505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 473
Target Start/End: Complemental strand, 6358244 - 6358190
Alignment:
Q  420 cagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctg 473  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||  ||||||||    
T  6358244 cagggtctgggaaggggtcccaccattttggtgttttgtacgcagctttaccctg 6358190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 20982773 - 20982843
Alignment:
Q  407 gctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||||||  ||||||| | |||| |||||||||||| ||||||||||  |||| |||||||| ||||    
T  20982773 gctcccgcatacgcagggtccgagaagagatcccaccattaggtgtattgttggcagccttaccctatttt 20982843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 463
Target Start/End: Complemental strand, 7074664 - 7074595
Alignment:
Q  395 tggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcag 463  Q
    |||||||||| |||||||| |||| |||||||| | ||| | |||||| |||| ||||||||||||||||    
T  7074664 tggtgcactaaagctcccggatatgcagggtctagaaagaggtcccacaattttggtgtattgtacgcag 7074595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 15629924 - 15629989
Alignment:
Q  140 caatcaaaggaatcaaaagggaggaagaaaccaaattgtgagtact-tactcaccaaacaaccaaa 204  Q
    |||||| | |||||| |||||  ||||||||||||||||||| |||  ||||||||||||||||||    
T  15629924 caatcagaagaatcataaggggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaaa 15629989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 16120876 - 16120823
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 435  Q
    |||||||||| ||||||||| || ||||||||||||| ||||| | ||||||||    
T  16120876 aaaaagggcagcctggtgcattaaagctcccgcatatgcaggggccgggaaggg 16120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 536
Target Start/End: Original strand, 49722641 - 49722726
Alignment:
Q  452 tattgtacgcagtcttaccctgtt-ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaact 536  Q
    ||||||||||| ||||||||| || ||  |||||||| ||||| || ||||| ||||||  |||||||| |||| |||||||||||    
T  49722641 tattgtacgcaatcttaccctattattttacaagaggttgtttacatgacttaaacccgtgacctttcattcacgtgacaacaact 49722726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 539
Target Start/End: Original strand, 19656104 - 19656263
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||| || |||||| || |||||  |||||| |||||||   ||| || ||| ||||||| ||||||||||||  ||  ||||| ||||||  ||    
T  19656104 aaaagggcagcccggtgcattaaagctcttgcatatgcagggtccaagaaagggtcctaccattttggtgtattgtacatagcgttaccatgttttttac 19656203  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||||||||||||||| | ||||| |  |  |||||| ||||||  |||||||||||||    
T  19656204 acaagaggctgtttccaagccttgagctagtgacctttgagtcacgcgacaacaacttta 19656263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 4e-64; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 47528527 - 47528687
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  47528527 aaaaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 47528626  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  47528627 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 47528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 48598823 - 48598982
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||||| |||||||||||||||| |||||| || |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  48598823 aaaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 48598922  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  48598923 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 48598982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 20225117 - 20224960
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaa 483  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 20225018  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  20225017 gaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 20224960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 11054145 - 11054305
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| | || |||||||||||||||||||||||||||||||||||||||    
T  11054145 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgttttaca 11054244  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  11054245 caagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 11054305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 382 - 539
Target Start/End: Original strand, 9832311 - 9832468
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||||| |||||||||||| ||| |||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9832311 aaaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 9832410  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||||||||||| |||||||||||||||  |||||||||||| || ||||||| ||||    
T  9832411 aagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 5648395 - 5648235
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttaca 480  Q
    |||||||||||||  |||||||  ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  5648395 aaaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttaca 5648296  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  5648295 caagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttacc 5648235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 386 - 525
Target Start/End: Original strand, 29207900 - 29208039
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaaga 485  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaaga 29207999  T
Q  486 ggctgtttccaggacttgaacccgcaacctttcagtcaca 525  Q
    |||  |||||||||||||||||||  ||||||||||||||    
T  29208000 ggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 16408598 - 16408762
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt- 477  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| | ||||||||  |||||||||||||||||||||||||||||||     
T  16408598 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttt 16408697  T
Q  478 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  16408698 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 16408762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 385 - 541
Target Start/End: Original strand, 6430627 - 6430784
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaa 483  Q
    |||||||||| ||||| ||| ||||||||||||  ||||||| |||||| | ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 6430726  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  6430727 gaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttacc 6430784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 30639517 - 30639356
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttac 479  Q
    ||||||||||||||  |||||||| ||||||||||||| ||||||| |||||||| || |||||||||||||||||||||||| ||||||||| ||||||    
T  30639517 aaaaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttac 30639418  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| |||||||||||||||||||| |  |||||||||||||| |||||||||||||||    
T  30639417 acaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttacc 30639356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 385 - 541
Target Start/End: Original strand, 8473621 - 8473779
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggt--ctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||| ||||||||| ||||||||||||| |||||   | |||||||| |||||||||||||||||||||| |||| |||||||||||  |||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctgttaaacaca 8473720  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||    
T  8473721 agaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaactttacc 8473779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 381 - 537
Target Start/End: Original strand, 17043392 - 17043549
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    ||||| ||||| ||||||||| || |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||  |||||    
T  17043392 aaaaaggggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtatttta 17043490  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  17043491 cacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 381 - 536
Target Start/End: Original strand, 39077793 - 39077948
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||| || |||   || ||||||||||| |||||||||||  ||||||||||||||||    
T  39077793 aaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgttttaca 39077892  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaact 536  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  39077893 caagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 385 - 541
Target Start/End: Complemental strand, 40915962 - 40915805
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaa 483  Q
    |||||||| | ||||||||  ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||    
T  40915962 aagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtttttacacaa 40915863  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||    
T  40915862 gaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttacc 40915805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 5306657 - 5306822
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccg----catatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-tt 475  Q
    |||||||||||||| |||||| || ||||||||    ||||  ||||||| |||||||| ||||||||||||||||||||||||||  ||||||||| ||    
T  5306657 aaaaaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgatt 5306756  T
Q  476 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  5306757 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttacc 5306822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 387 - 541
Target Start/End: Complemental strand, 21647098 - 21646940
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--acaca 482  Q
    |||||||| ||||||||| ||||||||||||| | |||||||||||||| ||||||||||  |||| |||||||||||| |||||||| ||||  |||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacaca 21646999  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||    
T  21646998 agaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttacc 21646940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 23501927 - 23501769
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctg--ttt 476  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||| |||||||||  |||||||||||||||||  |||||||||  |||    
T  23501927 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttt 23501828  T
Q  477 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||      ||||||||||||  ||||||||||||||||||||||||||||||    
T  23501827 tacacaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttacc 23501769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 382 - 537
Target Start/End: Complemental strand, 54175202 - 54175043
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctggg-aagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt-a 478  Q
    |||||||||| || ||||||||| ||||||||||||| ||||||| ||| ||||| ||||||||||| |||||||||||||||| ||||||||||||| |    
T  54175202 aaaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttta 54175103  T
Q  479 cacaagaggctgttt-ccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    ||||||||||||||| |||||||||||| |||  || |||||||||||||||||||||||    
T  54175102 cacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 47444095 - 47443929
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    ||||||||||||||  |||||||  |||||| |||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||  |||||    
T  47444095 aaaaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttta 47443996  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctt----tcagtcacatgacaacaactttacc 541  Q
    | |||||||||||||||||||||||||||||  |||||    || ||||||||| ||||||||||||    
T  47443995 cgcaagaggctgtttccaggacttgaacccgtgacctttcggtcggtcacatgagaacaactttacc 47443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 16911700 - 16911538
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||| |||  |||| ||||||||| ||  ||||||| |||||||| ||||||||||  ||||||||||||||||| ||||||||| |||  |    
T  16911700 aaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgta 16911601  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||| ||||||||||||||  |||||| |||||||||||||||||||||||    
T  16911600 cacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttacc 16911538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 380 - 541
Target Start/End: Complemental strand, 35567309 - 35567146
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    |||||||||||| || ||||||||| |||||||||| |  ||||||  |||||||| |||||||||||||||| |||||| ||| |||||||||  ||||    
T  35567309 taaaaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgtttttt 35567210  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| ||||||||||| |||||||||||   |||||||||| |||||||||||||||||||    
T  35567209 acacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 44363130 - 44363291
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||||||||||  ||||  |||||||||| | |||||||||||  ||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttac 44363229  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||| |||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||    
T  44363230 acacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 44363291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 541
Target Start/End: Complemental strand, 19027971 - 19027824
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgttt 493  Q
    ||||||||| ||||||| ||||  ||| |||||| ||||| |||||||| |||||||||||||||||| |||||||||  |||||||||||| | |||||    
T  19027971 ggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgttt 19027872  T
Q  494 ccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  19027871 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacc 19027824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 382 - 531
Target Start/End: Complemental strand, 25463258 - 25463108
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    |||||||| | |||||||||| | ||||||||||||| ||||||| |||||||| |||||||||||||||| |||||||||  ||| ||| |||||  ||    
T  25463258 aaaaagggtagcctggtgcacaa-agctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttac 25463160  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 531  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  25463159 acaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 384 - 539
Target Start/End: Original strand, 30690176 - 30690340
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---------t 474  Q
    |||||||| |||||||||||| ||||||||||||  ||||||| |||||||| |||||||| ||||||||||||| |||| |||||||||         |    
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttattt 30690275  T
Q  475 tttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||| ||||||    
T  30690276 tttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 381 - 500
Target Start/End: Original strand, 20639655 - 20639777
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||||||| ||||||||||||||||||| |||||||||  ||||    
T  20639655 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttt 20639754  T
Q  478 acacaagaggctgtttccaggac 500  Q
    |||||||||||||||||||||||    
T  20639755 acacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 382 - 509
Target Start/End: Original strand, 10277755 - 10277882
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||| | ||| ||||||| ||||||||||| |||||||||||||||| |  |||||||||||||||||||||||| |||| ||| ||||| ||    
T  10277755 aaaaagggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcctattttatac 10277854  T
Q  482 aagaggctgtttccaggacttgaacccg 509  Q
    ||||||||||||| |||| |||||||||    
T  10277855 aagaggctgtttcaaggatttgaacccg 10277882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 14983970 - 14983810
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgttttaca 480  Q
    ||||||||||| |||| ||||| ||||||||||||  ||||||| |||||||| ||||||||||| |||||||||| |||  |||||||  | |||||||    
T  14983970 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttaca 14983871  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||| | |||||||| |||  ||||| || ||| |||||||||||||||||    
T  14983870 caagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttacc 14983810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 41018833 - 41018945
Alignment:
Q  423 ggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagt 521  Q
    ||||||||||||| |||||| ||||||||||||||||| || ||||||||  |||||||||||||| |||||||||||||||||||||  ||||||||||    
T  41018833 ggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttccaggacttgaacccgtgacctttcagt 41018932  T
Q  522 cacatgacaacaa 534  Q
    ||| |||||||||    
T  41018933 cacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 406 - 538
Target Start/End: Original strand, 49938615 - 49938746
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttg 503  Q
    ||||||||||||| |||||| ||||||||| ||||||||||| |||||||||||| |   ||||||| ||||| ||||||||||||||||||||||||||    
T  49938615 agctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac---cttaccccgtttttacacaagaggctgtttccaggacttg 49938711  T
Q  504 aacccgcaacctttcagtcacatgacaacaacttt 538  Q
    |||| |  ||||||||||||| |||||||||||||    
T  49938712 aacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 407 - 534
Target Start/End: Original strand, 7385499 - 7385628
Alignment:
Q  407 gctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttga 504  Q
    ||||||||||| |||||||| ||||| || |||||||||||||||||||| || ||  |||||||| ||||  ||||| ||||||||||||||| |||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttga 7385598  T
Q  505 acccgcaacctttcagtcacatgacaacaa 534  Q
    |||||  |||||||||||||||||||||||    
T  7385599 acccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 497
Target Start/End: Complemental strand, 25629186 - 25629069
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgttttac 479  Q
    ||||||||||||| ||||||||| |||||||||||||  |||||| |||||||| ||||||||||||||||||||||| ||| |||||||  | ||||||    
T  25629186 aaaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttac 25629087  T
Q  480 acaagaggctgtttccag 497  Q
    ||||||| ||||||||||    
T  25629086 acaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 13256397 - 13256556
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    ||||||||||||| ||||||||| |||||||||| || | ||||  |||||||| |||||| ||  |||||||||||||||||| |||||||||  ||||    
T  13256397 aaaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgtttttt 13256496  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||    |||||||||||||||    ||||| ||||||||||||||||||||||||    
T  13256497 acacaagaggc----tccaggacttgaacctatgaccttccagtcacatgacaacaactttacc 13256556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 396 - 538
Target Start/End: Original strand, 30496334 - 30496476
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttcc 495  Q
    ||||||||| ||||||  ||||  || |||| |||||||  |||| ||||||||||||||||| |||| |||||||   |||||||||||||||||||||    
T  30496334 ggtgcactaaagctccatcataagcacggtccgggaaggagtccccccatttggtgtattgtatgcagccttacccgtgtttacacaagaggctgtttcc 30496433  T
Q  496 aggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    | ||||||||| ||  ||||||||||||| |||||||||||||    
T  30496434 atgacttgaacacgtgacctttcagtcacgtgacaacaacttt 30496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 398 - 541
Target Start/End: Complemental strand, 37494972 - 37494827
Alignment:
Q  398 tgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttcc 495  Q
    ||||||| |||||| |||||  |||||||  | ||||| |||||||||||||| ||||||| |||  |||||||||||||  |||||||||| |||||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttcc 37494873  T
Q  496 aggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||| |  ||||||||||| |||| |||||||||||||    
T  37494872 aggacttgaacctgtgacctttcagtcgcatggcaacaactttacc 37494827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 437 - 541
Target Start/End: Complemental strand, 14590920 - 14590813
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaaca 533  Q
    |||||||||||| ||||||||| |||| |||||||||||||   | ||||||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  14590920 tcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaaca 14590821  T
Q  534 actttacc 541  Q
    ||||||||    
T  14590820 actttacc 14590813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 20908633 - 20908797
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttacc--ctgtttt 477  Q
    ||||||||||| ||| |||||||| ||||||||||||  ||||||  |||||||| |||||||| ||||||||||||||||||| ||||||  || ||||    
T  20908633 aaaaaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttt 20908732  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaac-ctttcagtcacatgacaacaactttacc 541  Q
    | | |||| | |||||||| |||||||||  | |||  |||||||||||||||||||||||||||    
T  20908733 agaaaagacgatgtttccatgacttgaacatgtaacattttcagtcacatgacaacaactttacc 20908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 541
Target Start/End: Complemental strand, 54730375 - 54730225
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt---acacaagaggctg 490  Q
    ||||||||| ||||||||||||  ||||||| |||||||| | ||| ||||  ||||||||| ||||||| |||| ||| ||||   |||||||||||||    
T  54730375 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggctg 54730276  T
Q  491 tttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| ||||||||||||||  ||||||  ||||||||||||||||||||||    
T  54730275 tttctaggacttgaacccgtgaccttttggtcacatgacaacaactttacc 54730225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 420 - 541
Target Start/End: Original strand, 47441566 - 47441689
Alignment:
Q  420 cagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacccgcaaccttt 517  Q
    ||||||| |||||||| ||| ||||||||||||||||||| ||| |||||||||  ||||||| ||||| |||||||  ||||||||||| |  ||||||    
T  47441566 cagggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgaccttt 47441665  T
Q  518 cagtcacatgacaacaactttacc 541  Q
    ||||||| ||||||||||||||||    
T  47441666 cagtcacgtgacaacaactttacc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 381 - 505
Target Start/End: Original strand, 9987831 - 9987957
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt--ttta 478  Q
    |||||| |||| || |||||| || ||||||||||||| || ||||  ||||||| |||||||||||||||||||||| |||| |||||||| |  ||||    
T  9987831 aaaaaaaggcagcccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgttta 9987930  T
Q  479 cacaagaggctgtttccaggacttgaa 505  Q
    ||||||||| |||||||||||||||||    
T  9987931 cacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 30352577 - 30352750
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagt----cttaccctgt 474  Q
    |||||||||||||  ||||||||| ||||||||||||  ||||||| | |||||| |||||||||||  ||||||||||||||||     ||||||||||    
T  30352577 aaaaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgt 30352676  T
Q  475 ttt-------acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||       ||||||||||||||||||||||||  ||||||  ||||||| ||||| ||||||||||||||||    
T  30352677 ttttttttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttacc 30352750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 381 - 455
Target Start/End: Complemental strand, 38786747 - 38786673
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtatt 455  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  38786747 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 54967133 - 54966997
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttg 503  Q
    |||||||||||||  |||||  |||||||| |||||||||||||| ||||||| |||  |||||||||||||  |||||||||| | ||||||| |||||    
T  54967133 agctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaacttg 54967035  T
Q  504 aacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||  |  ||||||||||||||||||||||||||||||    
T  54967034 aacatgtgacctttcagtcacatgacaacaactttacc 54966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 436 - 541
Target Start/End: Original strand, 487186 - 487294
Alignment:
Q  436 atcccaccatttg-gtgtattgtacgcagtcttaccctgtttta--cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 532  Q
    ||||||||||||  |||||||||||||||  ||||| |||||||  ||||||||| |||||||| ||||||||||||  |||||||||||||||||||||    
T  487186 atcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaac 487285  T
Q  533 aactttacc 541  Q
    |||||||||    
T  487286 aactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 499
Target Start/End: Original strand, 7909281 - 7909397
Alignment:
Q  385 aagggcaacctggtgcactagagctccc-gcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacaca 482  Q
    |||||||||| | ||||||| ||||||| |||||  ||||||  |||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||    
T  7909281 aagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttttacaca 7909380  T
Q  483 agaggctgtttccagga 499  Q
    |||| ||||||||||||    
T  7909381 agagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 539
Target Start/End: Original strand, 32478792 - 32478942
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acaca 482  Q
    ||||||| ||| ||||||| | ||||||||||||  | ||||| |||||||| |||||||||||||||||||     ||| ||||||||||||| ||||     
T  32478792 aaagggccacccggtgcacaa-agctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctgtttttacact 32478885  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||| ||||||||||||||||||| |  |||| || ||||||||||||||||||||    
T  32478886 agaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 39029059 - 39029220
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg-gtgtattgtacgcagtcttaccctgtttt-- 477  Q
    ||||||||||| |||| ||| ||| ||||||||||||| ||||||| || ||| | |||||||||||  ||||||||||| ||| |||||||||||||      
T  39029059 aaaaaagggcatcctg-tgc-ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgtttttt 39029156  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||| | ||||||||    |||||| ||||||| |||||||||||||||    
T  39029157 acacaagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 406 - 497
Target Start/End: Complemental strand, 49796910 - 49796818
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccag 497  Q
    ||||||||||||  ||||||  |||||||| ||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  49796910 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 10660544 - 10660380
Alignment:
Q  381 aaaaaagggcaacctggtgcact-agagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||| |||||||| | |||||| | ||||||||||||  |||| ||| ||||||| || |||||||  |||||||||||| |||| | |||||| ||||    
T  10660544 aaaaaggggcaacccgatgcacttaaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctatttt 10660446  T
Q  478 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
      ||| |||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  10660445 ttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttacc 10660380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 10874689 - 10874525
Alignment:
Q  381 aaaaaagggcaacctggtgcact-agagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||| |||||||| | |||||| | ||||||||||||  |||| ||| ||||||| || |||||||  |||||||||||| |||| | |||||| ||||    
T  10874689 aaaaaggggcaacccgatgcacttaaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgcagccataccctatttt 10874591  T
Q  478 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
      ||| |||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  10874590 ttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttacc 10874525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 20405224 - 20405069
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctg---tttta 478  Q
    |||||||||||   ||||||| ||||||||||||| | ||||| |||||||| |||||||||  || |||||||||||||| ||||||||||   |||||    
T  20405224 aaagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgttttttta 20405125  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||| |||       ||||  ||||| ||||||||||||||||||||||||    
T  20405124 cacaagaggctgtttctagg-------cccgtgaccttccagtcacatgacaacaactttacc 20405069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 136 - 312
Target Start/End: Complemental strand, 54147813 - 54147639
Alignment:
Q  136 caatcaatcaaaggaatcaaaagggaggaagaaaccaaattgtgagta-cttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaacca 234  Q
    |||||||||| | |||||||||||| | |||||||||||||||||| | |  |||||||||||||||||| |||||| ||| ||| ||||||||||   |    
T  54147813 caatcaatcagaagaatcaaaagggggaaagaaaccaaattgtgagcaccaaactcaccaaacaaccaaaatgtgagaactagactcaccaaacaactaa 54147714  T
Q  235 attgtgagtactatcttactcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagc 312  Q
    | |||||| ||   || ||||||| |||||  ||||| |||||||| |||| ||||||||||||| ||||| ||||||    
T  54147713 agtgtgagcac---ctgactcaccaaacaaacaaattatgagcacttgacccaccaaacaaacaatccaatagtgagc 54147639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 384 - 474
Target Start/End: Complemental strand, 20225211 - 20225119
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctgt 474  Q
    ||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| |||||||||  |||||||||||||||||| ||||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 383 - 493
Target Start/End: Original strand, 51865037 - 51865149
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttaca 480  Q
    |||||||||  | |||||| || ||||||||||||  ||||||| ||||||||  |||||||||||||||||||||||||| |||||| ||  |||||||    
T  51865037 aaaagggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttaca 51865136  T
Q  481 caagaggctgttt 493  Q
    |||||||||||||    
T  51865137 caagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 397 - 505
Target Start/End: Complemental strand, 21489210 - 21489099
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgttt 493  Q
    |||||| | ||||||||||||  ||||||  |||||||| ||||||||||| |||| ||||||||||||||||| |||||||  || |||||||||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgttt 21489111  T
Q  494 ccaggacttgaa 505  Q
    ||||||||||||    
T  21489110 ccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 445 - 541
Target Start/End: Complemental strand, 25343261 - 25343163
Alignment:
Q  445 tttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||| |||||||||||||  ||||||||| || ||||||| ||||||||| |  |||| |||||||| ||||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacc 25343163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 459 - 541
Target Start/End: Original strand, 42164224 - 42164307
Alignment:
Q  459 cgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||| ||||||||||||| |||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||| ||||||    
T  42164224 cgcagccttaccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 55766466 - 55766625
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt-tacaca 482  Q
    |||||||| || ||||||||| ||||| ||||||  || |||| |||| ||| | ||||||||  ||||||||||||||| ||||||||||||  |||||    
T  55766466 aaagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgtttacacaca 55766565  T
Q  483 agaggctgtttccaggacttgaa-cccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||  |||||||||  ||||||| ||||  ||||| | ||||||||||||||||||||||    
T  55766566 agaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttacc 55766625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 55830721 - 55830880
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt-tacaca 482  Q
    |||||||| |||||||||||| ||||| ||||||  || |||| |||| ||| | ||||||||  |||||||||||||||  |||||||||||  |||||    
T  55830721 aaagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgtttacacaca 55830820  T
Q  483 agaggctgtttccaggacttgaac-ccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| |||||||||  |||||||| |||  ||||| |  |||||||||||||||||||||    
T  55830821 agagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaacaactttacc 55830880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 381 - 539
Target Start/End: Original strand, 23580205 - 23580365
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    ||||||||||| |  ||||||||| ||||||| |||| ||| ||||   |||||| || | ||| ||||||||||  ||||||||||| |||||  ||||    
T  23580205 aaaaaagggcagctcggtgcactaaagctcccacatacaca-ggtccaagaaggggtctcgccattttggtgtatcctacgcagtcttcccctgtttttt 23580303  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||||||||||| |||| || |||||||||||  ||||||||||||| ||||||||||||||    
T  23580304 acacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 539
Target Start/End: Original strand, 30581481 - 30581624
Alignment:
Q  400 cactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttcc 495  Q
    ||||| ||||||  ||||| ||||||| |||||||| ||||||||||| |||||||||||| ||  |||||||||||||   |||||||||| |||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttcc 30581580  T
Q  496 aggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    | |||||||||||   |||||| ||| |  ||||||||||||||    
T  30581581 acgacttgaacccttgaccttttagtgatgtgacaacaacttta 30581624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 16870738 - 16870646
Alignment:
Q  151 atcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagt 243  Q
    ||||||||||  ||||||||||||||||||| || | |||||||||||||||||||||||| | ||||| |||||||||| | |||| |||||    
T  16870738 atcaaaaggggagaagaaaccaaattgtgagcacatgctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaattatgagt 16870646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 540
Target Start/End: Original strand, 3580862 - 3580994
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttg 503  Q
    ||||||| ||||| ||||||| |||||||| ||| | |||||||||||||| || ||| |||||| ||  |||||||||||||   ||||||| ||||||    
T  3580862 agctcccacatatgcagggtccgggaaggggtcctagcatttggtgtattgcacacagccttaccatggtttttacacaagag---gtttcca-gacttg 3580957  T
Q  504 aacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||| ||  || ||||||||||||||||||||||||||    
T  3580958 aactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 17315390 - 17315457
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||| |||||| |||| |||||||||  ||||||||||||||||||||||||||||||    
T  17315390 ttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttacc 17315457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 529
Target Start/End: Complemental strand, 7038188 - 7038041
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccc--tgttttac 479  Q
    ||||||||||||  |||||||| |||||| | |||  ||||||| ||| |||   |||||||||| ||||||||||||| ||||||||||  | ||||||    
T  7038188 aaaagggcaacccagtgcactaaagctcc-gtatacgcagggtccgggtaggtgccccaccattttggtgtattgtacgaagtcttaccctattttttac 7038090  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgac 529  Q
    |||||| ||||||| ||||||||||||| |  ||||||||||||||||||    
T  7038089 acaagaagctgttt-caggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 476 - 541
Target Start/End: Complemental strand, 43035289 - 43035224
Alignment:
Q  476 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||| ||||||| |||||||||||||  ||||||||||||| ||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 445
Target Start/End: Complemental strand, 32484371 - 32484307
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 445  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||| |||||||||    
T  32484371 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 28494289 - 28494222
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg 448  Q
    |||||| |||| || ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  28494289 aaaaaaaggcagcccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccatttg 28494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 187 - 345
Target Start/End: Complemental strand, 54147730 - 54147571
Alignment:
Q  187 actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatcttactcacccaacaactaa----attgtgagcactag 282  Q
    |||||||||||||| |||||||||||||  ||| |||||||||||| |||| |||| |||   | || |||| |||||  ||    || ||||||||| |    
T  54147730 actcaccaaacaactaaagtgtgagcacctgactcaccaaacaaacaaattatgagcact---tgacccaccaaacaaacaatccaatagtgagcacttg 54147634  T
Q  283 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaatt 345  Q
    ||| |||||||||||||||||||||||||  ||| | ||||||||  |||| |||||||||||    
T  54147633 acctaccaaacaaacaaaccaattgtgaggactatcttgactcacctaacaaccaaacaaatt 54147571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 54640431 - 54640498
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||| ||| ||||||||| ||||||    
T  54640431 ttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc 54640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 477
Target Start/End: Original strand, 36816381 - 36816478
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacc-atttggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||||||||| ||| ||||| |||||||||||| ||||||||  ||||||  |||||||  ||||||||||||||||||| | | |||||||||    
T  36816381 aaaaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgcagccctgccctgtttt 36816478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 385 - 477
Target Start/End: Original strand, 12711450 - 12711542
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||||  ||||||||| || | |||||||  |  |||||| |||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  12711450 aagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttt 12711542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 458
Target Start/End: Original strand, 33836484 - 33836563
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgta 458  Q
    |||||||||||||| | ||||||| ||||||||||||  ||||||| |||||||| |||||||||  |||||||||||||    
T  33836484 aaaaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 532
Target Start/End: Original strand, 32629308 - 32629418
Alignment:
Q  423 ggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctgttttac-acaagaggctgtttccaggacttgaacccgcaacctttcag 520  Q
    |||| |||||||| |||| ||| |||||||||| ||| || | |||||||||||||   ||||||||||||||| |||| |||||||||  |||||||||    
T  32629308 ggtccgggaaggggtcccgccaatttggtgtat-gtaggcggccttaccctgtttttttacaagaggctgtttcgaggatttgaacccgtgacctttcag 32629406  T
Q  521 tcacatgacaac 532  Q
    ||||||||||||    
T  32629407 tcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 541
Target Start/End: Complemental strand, 36589876 - 36589720
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctg--ttttacacaa 483  Q
    ||||| || ||||||| | |||||||||||| | |||||   ||||||| |||||||| ||||||||| |||   |||  ||||| ||  ||||||||||    
T  36589876 gggcagcccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccattttggtgtactgtcaacagcattaccatgttttttacacaa 36589777  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||| |  || |||||||||  ||||| ||||||||||    
T  36589776 gaggctgtttccaggacttgaacctg-gacgtttcagtcatgtgacatcaactttacc 36589720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 446
Target Start/End: Original strand, 38755908 - 38755970
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 446  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 447 - 537
Target Start/End: Complemental strand, 51420646 - 51420553
Alignment:
Q  447 tggtgtattgtacgcagtcttaccctgttt--tacacaagaggctgtttccaggacttgaacccgc-aacctttcagtcacatgacaacaactt 537  Q
    ||||||||||||| ||| ||||||||||||  ||||||||||| |||||||| |||||||| |  |  ||||||||||||| ||||||||||||    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaatcaactgacctttcagtcacgtgacaacaactt 51420553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 478
Target Start/End: Complemental strand, 16494338 - 16494258
Alignment:
Q  400 cactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctgtttta 478  Q
    ||||| |||| ||||||| |||||||||||||| || ||||||||  |||||||||||||| ||||  |||||||||||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttta 16494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 11394987 - 11394923
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg 448  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| || ||||| ||||||||||||    
T  11394987 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 11404714 - 11404650
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg 448  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| || ||||| ||||||||||||    
T  11404714 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 12257688 - 12257752
Alignment:
Q  477 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| |||||||| |||| |||||||||  |||||||| |||| ||||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 541
Target Start/End: Complemental strand, 44357319 - 44357196
Alignment:
Q  421 agggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgttt--tacacaagaggctgtttccaggacttgaacccgcaaccttt 517  Q
    ||||||||||||| | |||| |||||| |||||||||||||  ||||||| || |||  ||||||| ||| |||||| ||||||||||| |   ||||||    
T  44357319 agggtctgggaagaggtcccgccattttggtgtattgtacgtcgtcttactctatttattacacaaaaggttgtttctaggacttgaactcatgaccttt 44357220  T
Q  518 cagtcacatgacaacaactttacc 541  Q
    |||| |||| |||| |||||||||    
T  44357219 cagttacataacaataactttacc 44357196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 490
Target Start/End: Original strand, 12047721 - 12047823
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagag 486  Q
    ||||| |||||||||||| || ||||||||| | ||||| |||||| || ||| | ||  |||||||||||| ||||||||||||||||||  |||| ||    
T  12047721 gggcagcctggtgcactataggtcccgcatacatagggtatgggaatgggtcc-atcaactggtgtattgtatgcagtcttaccctgtttttaacaatag 12047819  T
Q  487 gctg 490  Q
    ||||    
T  12047820 gctg 12047823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 437 - 538
Target Start/End: Original strand, 49938491 - 49938594
Alignment:
Q  437 tcccaccatttgg-tgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 534  Q
    ||||||||||| | || |||| |||||| ||||||||||||| |||||| | |||| ||||| |||||||| | |  ||||||||||||| |||||||||    
T  49938491 tcccaccattttgatgaattggacgcagccttaccctgtttttacacaatacgctgcttccaagacttgaatctgtgacctttcagtcacgtgacaacaa 49938590  T
Q  535 cttt 538  Q
    ||||    
T  49938591 cttt 49938594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 541
Target Start/End: Original strand, 5313099 - 5313153
Alignment:
Q  487 gctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| ||||| |||||||||  |||||||| |||||||||||||||||||||    
T  5313099 gctgttttcaggaattgaacccgtgacctttcaatcacatgacaacaactttacc 5313153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 541
Target Start/End: Complemental strand, 41549428 - 41549358
Alignment:
Q  471 ctgttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||| ||||||||| |||||||||||  || ||||| |||  || |||||||||||||    
T  41549428 ctgttttacacaagaggttgtttccagaacttgaacccgtgacatttcaatcatgtgtcaacaactttacc 41549358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 526
Target Start/End: Original strand, 10379997 - 10380086
Alignment:
Q  438 cccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    ||||| ||||||||||||||||||| | ||| ||| |||| |||||||||| |||||  |||||||||||  |  |||||||||||||||    
T  10379997 cccactatttggtgtattgtacgcaattttatcctatttttacacaagaggttgtttgtaggacttgaacaagtgacctttcagtcacat 10380086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 35532130 - 35532077
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagg 434  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||    
T  35532130 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 40553937 - 40553998
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 445  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| || ||||||    
T  40553937 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 384 - 445
Target Start/End: Complemental strand, 44718702 - 44718641
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 445  Q
    ||||||||||| ||||  ||| ||||||||||||  |||||||||||||||| |||||||||    
T  44718702 aaagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 56323037 - 56322984
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 435  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||| ||||||||    
T  56323037 aaaaagggcaacccggtgcactaaagctcccgcatatccggggtccgggaaggg 56322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 16871215 - 16871155
Alignment:
Q  31 aatcaatcaaaggaatcaaatggggc-agaagtgcaatgcaatcaatcagaagaatcaaaa 90  Q
    ||||||||| | |||||||| ||||  |||||||||||||||||||||||| |||||||||    
T  16871215 aatcaatcagaagaatcaaaaggggagagaagtgcaatgcaatcaatcagacgaatcaaaa 16871155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 477
Target Start/End: Original strand, 48327763 - 48327858
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||| |||| ||||||||| | || ||||||||   ||||  |||||| | ||||||||||  |||||||||||| ||||||||||||||||||    
T  48327763 aaagggtaacccggtgcactaaaacttccgcatatgtggggttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctgtttt 48327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 54147933 - 54147869
Alignment:
Q  140 caatcaaaggaatcaaaagggaggaagaaaccaaattgtgagtact-tactcaccaaacaaccaa 203  Q
    |||||| | ||||||||||||  ||||||||||||||||||| |||  |||||||||||||||||    
T  54147933 caatcagaagaatcaaaaggggagaagaaaccaaattgtgagcactcgactcaccaaacaaccaa 54147869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 16870620 - 16870561
Alignment:
Q  295 aacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaac 354  Q
    |||||||||||||||||| |||   |||||||| ||||| |||||||||||||| |||||    
T  16870620 aacaaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 16870561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 16871086 - 16871004
Alignment:
Q  14 aaaggagggagaagtgtaat-caatcaaaggaatcaaatggggc-agaagtgcaatgcaatcaatcagaagaatcaaaagggg 94  Q
    ||||| |||||||||| ||| |||||| | |||||||| ||||  ||||||||||||||||||||| |||||| ||| |||||    
T  16871086 aaaggggggagaagtgcaatgcaatcagaagaatcaaaaggggggagaagtgcaatgcaatcaatcggaagaaccaatagggg 16871004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16871150 - 16871079
Alignment:
Q  20 gggagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaatcaaaaggggg 95  Q
    |||||||||| ||||||||| | ||| |||| | || ||||||||||||||    |||||||||||||||||||||    
T  16871150 gggagaagtgcaatcaatcagaagaaccaaaagtgggagaagtgcaatgca----atcagaagaatcaaaaggggg 16871079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 508
Target Start/End: Original strand, 17079704 - 17079777
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgttt--tacacaagaggctgtttccaggacttgaaccc 508  Q
    ||||||||||| | |||||||| |||| ||||||||||||  |||||||||   |||||||| |||||||||||    
T  17079704 tcccaccatttagcgtattgtatgcagccttaccctgttttatacacaagatattgtttccaagacttgaaccc 17079777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 446
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 446  Q
    ||||||||||| ||||||||| |||||  |||||  ||||||| |||||||| ||||||||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 42265492 - 42265431
Alignment:
Q  169 accaaattgtgagtactt-actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    ||||||||||||| |||| | |||||||||||||||| |||||| ||||||| ||||||||||    
T  42265492 accaaattgtgagcacttgaatcaccaaacaaccaaattgtgag-actcgactcaccaaacaa 42265431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 8820646 - 8820581
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 446  Q
    |||||||| ||| ||| ||||||| | ||| ||||||  |||||||||||||||| ||||||||||    
T  8820646 aaaaaaggacaatctgatgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 507
Target Start/End: Complemental strand, 14783806 - 14783722
Alignment:
Q  425 tctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacc 507  Q
    |||||||||||||||||| ||||| ||||||||| ||| | |||  |||  |||||||||| || |||||| ||| |||||||||    
T  14783806 tctgggaagggatcccactatttgatgtattgtatgcaattttattctgttttttacacaaaagactgtttacagaacttgaacc 14783722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 24225551 - 24225498
Alignment:
Q  193 caaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtact 246  Q
    |||||||||||| ||| |||||||||  |||||||||| | |||||||||||||    
T  24225551 caaacaaccaaattgtaagcactcgattcaccaaacaaccaaattgtgagtact 24225498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 30714 - 30555
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  30714 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgttttacac 30615  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  30614 aagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttacc 30555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 9e-62; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 385 - 541
Target Start/End: Original strand, 22122918 - 22123074
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaag 484  Q
    |||||||||| ||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaag 22123017  T
Q  485 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  22123018 agactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttacc 22123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 1217247 - 1217088
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  1217247 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgttttacac 1217148  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||| |||||||||||    
T  1217147 aagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttacc 1217088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 384 - 540
Target Start/End: Complemental strand, 39203671 - 39203515
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaa 483  Q
    ||||||||||| ||||||||| ||||||||||||| || |||| |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacacaa 39203572  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||    
T  39203571 gaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttac 39203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 380 - 541
Target Start/End: Original strand, 40272808 - 40272971
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    ||||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||  ||||    
T  40272808 taaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttt 40272907  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||| ||||||||||||||||||||   ||||| ||||||||||||||||||||||||    
T  40272908 acacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttacc 40272971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 383 - 538
Target Start/End: Original strand, 13628789 - 13628948
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgttt--ta 478  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| ||||||||||||  ||    
T  13628789 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctta 13628888  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  13628889 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 384 - 509
Target Start/End: Complemental strand, 31593004 - 31592879
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaa 483  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 31592905  T
Q  484 gaggctgtttccaggacttgaacccg 509  Q
    ||||||||||||||||||||||||||    
T  31592904 gaggctgtttccaggacttgaacccg 31592879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 13730599 - 13730763
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt- 477  Q
    |||||||||||||| ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  ||||||||||||| ||| |||||||||||||     
T  13730599 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttt 13730698  T
Q  478 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  13730699 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 13730763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 385 - 541
Target Start/End: Complemental strand, 22609921 - 22609764
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaa 483  Q
    |||||||||| ||||||||  ||||||||||||  || |||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaa 22609822  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||    
T  22609821 gaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc 22609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 26869866 - 26869705
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttac 479  Q
    |||||||||||||| ||||||| | ||||||||||||  || |||| || ||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  26869866 aaaaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttac 26869767  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  26869766 accagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 26869705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 26573287 - 26573125
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    |||| |||||| |||||||||||| ||||| ||||||  ||||||| |||| ||| |||||||| |||||||||||||||||| |||||||||  |||||    
T  26573287 aaaagagggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgtttttta 26573188  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  26573187 cacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 26573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 46421031 - 46421196
Alignment:
Q  381 aaaaaagggcaacctggtgcact-agagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||||||| | |||||||| | ||||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||    
T  46421031 aaaaaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 46421130  T
Q  478 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
      ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  46421131 ttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttacc 46421196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 12914034 - 12914194
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttaca 480  Q
    |||||||||||| |||||| |  ||||||||||||| |||||||||||||||| || |||||||||||||||||||||| | |||||||||  |||||||    
T  12914034 aaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttaca 12914133  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||  |  ||||||| ||||||| ||||||||||||||    
T  12914134 caagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttacc 12914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 385 - 541
Target Start/End: Original strand, 7696893 - 7697044
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaag 484  Q
    ||||| |||| ||||||||||||||||| ||||| ||| ||| ||||||||      |||||||||||||||||||||| ||||||||||||||||||||    
T  7696893 aagggaaacccggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccatttggtgtattgtacgcagccttaccctgttttacacaag 7696987  T
Q  485 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || ||||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  7696988 agactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 7697044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 29366719 - 29366881
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    ||||||||||||  |||||||| ||||||| ||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||  |    
T  29366719 aaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 29366818  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     ||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  29366819 tacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacc 29366881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 381 - 536
Target Start/End: Complemental strand, 7943150 - 7942993
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    |||||| |||||||  |||||||| ||||||||||||  || ||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||    
T  7943150 aaaaaaaggcaacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgtttttta 7943051  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaact 536  Q
     |||||| ||||||||||||||||||| |||  ||||| |||||||||||||||||||    
T  7943050 gacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 380 - 490
Target Start/End: Complemental strand, 15797381 - 15797271
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttac 479  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  15797381 taaaaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 15797282  T
Q  480 acaagaggctg 490  Q
    |||||||||||    
T  15797281 acaagaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 52926216 - 52926369
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||||| ||||| ||| ||||||||||||  ||||||| |||||||  ||||||||||||||||||||||||||| |||||       ||||    
T  52926216 aaaaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac-------taca 52926308  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  52926309 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 52926369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 8247683 - 8247848
Alignment:
Q  381 aaaaaagggcaacctggtgcact-agagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||| |||||||||  ||||||| | ||||||||||||  ||||||| |||||||  ||||||||||  ||||||||||||||||  |||||||||||||    
T  8247683 aaaatagggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgtttt 8247782  T
Q  478 --acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
      ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  8247783 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 8247848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 16735598 - 16735439
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttac-ac 481  Q
    ||||||||||||  |||||||  |||| |||||||  ||| ||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| | ||    
T  16735598 aaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttctac 16735499  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| ||||||||||||||  || || ||||||||||||||||||||||||    
T  16735498 aagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaactttacc 16735439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 396 - 541
Target Start/End: Original strand, 6411834 - 6411980
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagaggctgtttc 494  Q
    ||||||||| ||||||||||||  || ||||||||||||| ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttta 6411933  T
Q  495 caggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || |||||||||||   |||| ||||| |||||||||||||||||||    
T  6411934 caagacttgaacccatgacctatcagttacatgacaacaactttacc 6411980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 382 - 540
Target Start/End: Original strand, 34420641 - 34420802
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||| ||  |||||||| ||||||| ||||  || |||| |||||||| ||||||||||| ||||||| |||||||| |||||||||||||  |    
T  34420641 aaaaagggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgtttttta 34420740  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  34420741 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 382 - 531
Target Start/End: Complemental strand, 516571 - 516417
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt---ggtgtattgtacgcagtcttaccctgtttt- 477  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||| ||||||   ||| |||||| ||||| |||||||||||||     
T  516571 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttt 516472  T
Q  478 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 531  Q
     ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  516471 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 384 - 509
Target Start/End: Original strand, 10795423 - 10795552
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctg--ttttac 479  Q
    ||||||||||||||||||||  ||||||||||||  |||||||  ||||||| ||||||||  ||||||||||||||||||| |||||||||  ||||||    
T  10795423 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttac 10795522  T
Q  480 acaagaggctgtttccaggacttgaacccg 509  Q
    ||||||||||||||||||||||||||||||    
T  10795523 acaagaggctgtttccaggacttgaacccg 10795552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 382 - 481
Target Start/End: Original strand, 34771362 - 34771461
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    |||||||||| || ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  34771362 aaaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 34771461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 382 - 499
Target Start/End: Complemental strand, 54484850 - 54484730
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---tttta 478  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||| ||   |||||    
T  54484850 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttta 54484751  T
Q  479 cacaagaggctgtttccagga 499  Q
    |||||||||||||||||||||    
T  54484750 cacaagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 401 - 540
Target Start/End: Complemental strand, 9607345 - 9607202
Alignment:
Q  401 actagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttcca 496  Q
    |||| ||||||||||||| | |||||||||||||| ||||| ||||  ||||||||| ||||||| |||||||||||||  || ||||||||||||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  497 ggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||||||||||    |||||||||||||||||||||||||||||    
T  9607245 ggacttgaaccgatgacctttcagtcacatgacaacaactttac 9607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 382 - 538
Target Start/End: Original strand, 5173717 - 5173876
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt-a 478  Q
    ||||||||||||| ||||||||| ||||||||||||  || |||| ||||||||  ||||||||||  ||||||||| | |||  |||||  |||||| |    
T  5173717 aaaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgttttta 5173816  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  5173817 cacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 381 - 540
Target Start/End: Complemental strand, 25944630 - 25944468
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt-- 477  Q
    ||||||||||| |||||||| ||| ||||||| ||||  ||||||| |||||||| ||||||||||| |||||||||||| ||| ||| ||| |||||      
T  25944630 aaaaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagtttttt 25944531  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||| |||||| |||||||||||||||||||   ||||||||||||| |||||||||||||||    
T  25944530 acacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 382 - 489
Target Start/End: Complemental strand, 26292489 - 26292382
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||| ||||| |||||||||||| |||||||||| ||||||  |||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  26292489 aaaaaggacaacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctgttttacac 26292390  T
Q  482 aagaggct 489  Q
    ||||||||    
T  26292389 aagaggct 26292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 53996563 - 53996725
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||| || ||||||||| ||||||| ||||  ||| ||| |||||||| ||||||||||| ||||||||||| |||| |||||||||||||  |    
T  53996563 aaaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgtttttta 53996662  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| |||||||| ||||||||| ||  |||||||||||| |||||||||| ||||||    
T  53996663 cacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 507
Target Start/End: Complemental strand, 14987116 - 14986989
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    |||||| |||| ||||||||| ||||||||||||| || |||| ||||| || ||||||||||  ||||||||||||||||| |||||||||||||  ||    
T  14987116 aaagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 14987017  T
Q  480 acaagaggctgtttccaggacttgaacc 507  Q
    ||||||||||||||||||||||||||||    
T  14987016 acaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 437 - 541
Target Start/End: Original strand, 45620881 - 45620988
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaaca 533  Q
    |||||||| |||||||||||||||||| |||||||||||||   |||||||||||||||||||| |||||||||||  ||||||||||||| ||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaaca 45620980  T
Q  534 actttacc 541  Q
    ||||||||    
T  45620981 actttacc 45620988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 380 - 524
Target Start/End: Original strand, 54374341 - 54374488
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccc--tgttt 476  Q
    ||||||| |||| ||||||| |||| ||||||||||||| ||||||| |||||||| |||||||| ||||||| ||||||||||| |||||||  | |||    
T  54374341 taaaaaatggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttt 54374440  T
Q  477 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcac 524  Q
    ||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  54374441 tacacaagaggttgtttccaagacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 437 - 541
Target Start/End: Original strand, 4495717 - 4495823
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 534  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||| ||||| ||| |||||||||||||||  ||||| |||||||||||||||||    
T  4495717 tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaa 4495816  T
Q  535 ctttacc 541  Q
    |||||||    
T  4495817 ctttacc 4495823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 406 - 537
Target Start/End: Original strand, 30928169 - 30928302
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttg 503  Q
    ||||||| ||||| ||||||| |||||||| |||| ||| |||||||||| ||| ||  |||||| ||||||  ||||||||||||||||||||||||||    
T  30928169 agctcccacatatgcagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttg 30928268  T
Q  504 aacccgcaacctttcagtcacatgacaacaactt 537  Q
    ||||||  |||||||||||||||||||| |||||    
T  30928269 aacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 528
Target Start/End: Complemental strand, 33926224 - 33926094
Alignment:
Q  400 cactagagctcccgcatatacagggtctgggaagggatcccaccatt-tggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccag 497  Q
    ||||| ||||| ||||||| |||||||  ||||||| |||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||| |||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgtttttacacaagaggctatttccag 33926125  T
Q  498 gacttgaacccgcaacctttcagtcacatga 528  Q
    |||||||||||   |||||||||||||||||    
T  33926124 gacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 496
Target Start/End: Original strand, 49013469 - 49013589
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctg--tt 475  Q
    ||||||||||||||| ||||||||| ||||||||| ||| | ||||| |||||||| |||||||||  |||||||||||||||||| |||||||||  ||    
T  49013469 taaaaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 49013568  T
Q  476 ttacacaagaggctgtttcca 496  Q
    |||||||||||||||||||||    
T  49013569 ttacacaagaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 457 - 541
Target Start/End: Original strand, 10870025 - 10870110
Alignment:
Q  457 tacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  10870025 tacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 10870110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 537
Target Start/End: Original strand, 45948850 - 45948996
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgttttacacaagaggctgttt 493  Q
    ||||||||| ||||||||||||  ||||||| | |||||| |||||||| ||||||||||||| |||| |||||||  | |||||||||||||| |||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgttt 45948949  T
Q  494 ccaggacttgaacccgcaacct---ttcagtcacatgacaacaactt 537  Q
    |||||| |||||||||  ||||   ||||||||||||| ||||||||    
T  45948950 ccaggaattgaacccgtgaccttccttcagtcacatgaaaacaactt 45948996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 396 - 541
Target Start/End: Complemental strand, 19731147 - 19731000
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgttt 493  Q
    ||||||||| |||||| ||||| |||| ||||||||| || |||||||| | |||||||||||||||  |||||| ||  |||||||||||||||| |||    
T  19731147 ggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctattt 19731048  T
Q  494 ccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||| | |||  |||||||| |||| ||||||||| ||||||    
T  19731047 ccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 385 - 541
Target Start/End: Complemental strand, 33235687 - 33235528
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttacac 481  Q
    |||||||||||||||||||| |||| |||||||   | |||||| || ||| ||||||||||| ||||||||||| |||||||||||||   ||||||||    
T  33235687 aagggcaacctggtgcactaaagcttccgcatacgtaaggtctgcgagggg-tcccaccatttagtgtattgtacacagtcttaccctgtttttttacac 33235589  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttca-gtcacatgacaacaactttacc 541  Q
    |||||||| ||| || || ||||||  |  |||||||| ||||||||||||||||||||||    
T  33235588 aagaggctctttacacgatttgaacttgtgacctttcatgtcacatgacaacaactttacc 33235528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 379 - 493
Target Start/End: Original strand, 45786209 - 45786327
Alignment:
Q  379 ctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctg--t 474  Q
    |||| ||||||||||| ||||||||| |||||| ||||   ||||||| |||||||| ||||||||  ||||||||||||||||||| |||||||||  |    
T  45786209 ctaataaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttt 45786308  T
Q  475 tttacacaagaggctgttt 493  Q
    |||||||||||||||||||    
T  45786309 tttacacaagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 380 - 459
Target Start/End: Complemental strand, 24577996 - 24577917
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtac 459  Q
    ||||||||||||| | |||||||||||||||||| |||| ||||||||||||| |||||||||||||| |||||||||||    
T  24577996 taaaaaagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 423 - 528
Target Start/End: Original strand, 45139515 - 45139624
Alignment:
Q  423 ggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggacttgaacccgcaacctttc 518  Q
    ||||||||||||| |||||||||||  ||||||||||| |||| ||||||||||  ||||||||||||| ||||||||  |||||||||||  |||||||    
T  45139515 ggtctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttc 45139614  T
Q  519 agtcacatga 528  Q
    ||||||||||    
T  45139615 agtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 419 - 493
Target Start/End: Complemental strand, 47624163 - 47624088
Alignment:
Q  419 acagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagaggctgttt 493  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  47624163 acagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 149 - 374
Target Start/End: Complemental strand, 50295677 - 50295452
Alignment:
Q  149 gaatcaaaagggagga--agaaaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtac 245  Q
    |||||||||||| |||  |||||||||||| |||||||||| |||||||||||| ||||||  ||| |||| || |||||||||| |||| |||||| ||    
T  50295677 gaatcaaaaggggggagaagaaaccaaattatgagtacttaactcaccaaacaatcaaagtacgagaactcaactcaccaaacaacccaagtgtgagcac 50295578  T
Q  246 tatcttactcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaatt 345  Q
    |     ||||||  |||||| |||||||||||||| |||| || |||||||||| | ||||||| || ||| |   |||||  ||||| |||||||||||    
T  50295577 t---cgactcacgaaacaaccaaattgtgagcacttgacccactaaacaaacaatcaaattgtgtgcactatctcaactcatccaacaaccaaacaaatt 50295481  T
Q  346 gaatcaaacgaaaccaaatcaaactgaac 374  Q
    ||| |||||  ||| |||| |||||||||    
T  50295480 gaaccaaacagaacgaaattaaactgaac 50295452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 386 - 477
Target Start/End: Original strand, 353351 - 353444
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||| ||||||||| ||||||||||||| | ||||| |||||||| |||||||||  |||||||||||||||||| |||||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 353444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 532
Target Start/End: Complemental strand, 12525567 - 12525414
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    ||||||| ||||||||||||| |  |||||||| ||| ||||||||| ||||||  |||||||||||   || |  | ||||| |||||||||  |||||    
T  12525567 aaaaaagagcaacctggtgcagtgaagctcccgtatacacagggtctaggaaggtgtcccaccatttttggtgtacttcgcagccttaccctgattttta 12525468  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 532  Q
    ||||||||||||||||||||||| ||||| |  |||||||||||| ||||||||    
T  12525467 cacaagaggctgtttccaggactcgaacctgtgacctttcagtcatatgacaac 12525414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 230
Target Start/End: Complemental strand, 42530835 - 42530741
Alignment:
Q  136 caatcaatcaaaggaatcaaaagggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    |||||||||| | ||||||||||||  ||||||||||||||||||| ||   |||||||||||||||||||||||| ||||||| ||||||||||    
T  42530835 caatcaatcagaagaatcaaaaggggagaagaaaccaaattgtgagcacacgctcaccaaacaaccaaagtgtgagaactcgactcaccaaacaa 42530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 437 - 528
Target Start/End: Original strand, 54032612 - 54032705
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatga 528  Q
    |||||||||| ||||||||||| |||| |||||||||||||  |||||||||| |||||||||||||||||||||  ||||| |||||||||||    
T  54032612 tcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatga 54032705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 533
Target Start/End: Original strand, 8410889 - 8411016
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttccaggacttgaa 505  Q
    |||| |||| ||| ||||||||| |||| | |||||||| ||||||||||||  |||| |||||||||||||  ||| ||||| ||||||||||| ||||    
T  8410889 agcttccgcctatgcagggtctgagaagaggtcccaccagttggtgtattgtgagcagccttaccctgttttttacacgaggcagtttccaggacctgaa 8410988  T
Q  506 cccgcaacctttcagtcacatgacaaca 533  Q
    || |  ||||||||||| ||||||||||    
T  8410989 ccggtgacctttcagtcccatgacaaca 8411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 500
Target Start/End: Original strand, 31904857 - 31904975
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggga-tcccaccatttggtgtattgtacgcagtcttaccctg--ttttacac 481  Q
    ||||||| |||||||||||| |||||||||| |   | | |||||||||||  ||||||||||||||||||||||||||||| |||||||  |||||||     
T  31904857 aagggcagcctggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttttacat 31904956  T
Q  482 aagaggctgtttccaggac 500  Q
    || ||||||||||||||||    
T  31904957 aataggctgtttccaggac 31904975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 25517169 - 25517332
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttac 479  Q
    |||||||||||| ||||||||| |||||| |||||  |||| || |||||||| ||||||||||| ||||||||||||||| | || | ||   ||||||    
T  25517169 aaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttac 25517268  T
Q  480 acaagaggctgtttccagg--acttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| ||||||||||   | | | || |  ||||| ||||||||||||||||||||||||    
T  25517269 acaagaggatgtttccaggtcccatcatcctgtgaccttccagtcacatgacaacaactttacc 25517332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 430 - 537
Target Start/End: Complemental strand, 39212101 - 39211992
Alignment:
Q  430 gaagggatcccaccatttggtgtattgtacgcagtcttaccctgtt--ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatg 527  Q
    |||||||||||  ||| || ||||||||||||||||||||| ||||  |||||||||||| | |||||||||||||||||||  || ||||||||||||     
T  39212101 gaagggatcccgtcatctgatgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacata 39212002  T
Q  528 acaacaactt 537  Q
    || |||||||    
T  39212001 acgacaactt 39211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 467 - 541
Target Start/End: Complemental strand, 53062112 - 53062036
Alignment:
Q  467 taccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||  ||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 396 - 541
Target Start/End: Complemental strand, 19751723 - 19751576
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgttt 493  Q
    ||||||||| |||||  ||||| |||  ||||||||| || |||||||| | |||||||||||||||  |||||| ||  |||||||||||||||| |||    
T  19751723 ggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggctattt 19751624  T
Q  494 ccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||| | |||  |||||||| |||| |||||| || ||||||    
T  19751623 ccaggacttgcatccgtgacctttcaatcacgtgacaaaaaatttacc 19751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 459
Target Start/End: Complemental strand, 24578086 - 24578007
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtac 459  Q
    ||||||||||||||| |||||||||||| ||||||||||  |||||||||||| |  ||||||||||| |||||||||||    
T  24578086 taaaaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 497
Target Start/End: Complemental strand, 31831343 - 31831241
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaa 483  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||| ||           |||||||||||||||||| |||| |||||||| ||||||||||    
T  31831343 aaagggcaacccggtgcactagagcacccgcatatgcagggtccgg-----------accatttggtgtattgtatgcagccttaccctattttacacaa 31831255  T
Q  484 gaggctgtttccag 497  Q
    ||||||||||||||    
T  31831254 gaggctgtttccag 31831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 450
Target Start/End: Original strand, 24851298 - 24851367
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggt 450  Q
    |||||||||||||| ||||||||| ||||||||||||| |||| || |||||||| ||||||||||||||    
T  24851298 aaaaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatttggt 24851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 30452953 - 30452892
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 444  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  30452953 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 507
Target Start/End: Complemental strand, 55401288 - 55401208
Alignment:
Q  430 gaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacc 507  Q
    |||||| ||||||||||| |||||||| |||||||||||| ||||||||  |||||||||||||||| |||||||||||||    
T  55401288 gaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 35417981 - 35417914
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||| |||||| ||  |||| |||||||||||| ||||||||||||    
T  35417981 ttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc 35417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 398 - 506
Target Start/End: Original strand, 43114882 - 43114994
Alignment:
Q  398 tgcactagagctcccgcatatacaggg-tctgggaagggatcccaccatttggtgtattgtacgcagtc-ttaccctgtttt---acacaagaggctgtt 492  Q
    ||||||| ||||||||||||  ||||| ||  ||||||| |||||||||||||||||||||| | || | ||||||||||||   |||||||||||||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaaggg-tcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtt 43114980  T
Q  493 tccaggacttgaac 506  Q
    ||||||||||||||    
T  43114981 tccaggacttgaac 43114994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 508
Target Start/End: Complemental strand, 9276395 - 9276289
Alignment:
Q  409 tcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggc------tgtttccaggac 500  Q
    |||||||||  ||||||| ||||| || ||| ||||||||||||||||||||||| |||||||||  |||||||||||||||      ||||||||||||    
T  9276395 tcccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgaggttgtttccaggac 9276297  T
Q  501 ttgaaccc 508  Q
    ||||||||    
T  9276296 ttgaaccc 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 439 - 520
Target Start/End: Original strand, 52428532 - 52428616
Alignment:
Q  439 ccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccag-gacttgaacccgcaacctttcag 520  Q
    |||| |||||||||||||||||||| |||||||||  ||||||||||||||||| |||||| ||||| ||||||  |||||||||    
T  52428532 ccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctttcag 52428616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 44403553 - 44403715
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtg-tattgtacgcagtcttaccctgt--ttta 478  Q
    ||||| |||| || ||||||||| |||| | |||||   |||||| |||||||| ||||||||||| ||| |||| | ||||| |||||| |||  ||||    
T  44403553 aaaaaaggcagcccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtctttta 44403652  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||| || ||||||||| |||| |  |||||| || ||| |||||| |||||||||    
T  44403653 cacaagaggctattcccaggactttaacctgtgaccttttagccacgtgacaataactttacc 44403715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 46692047 - 46692165
Alignment:
Q  149 gaatcaaaagggag-gaagaaaccaaattgtgagtact-tactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtact 246  Q
    |||||||||||||| ||||||||||||||||||| |||  |||||||||||||| ||| |||||| | | ||| |||||||||| | ||||||||| |||    
T  46692047 gaatcaaaagggagagaagaaaccaaattgtgagcactcgactcaccaaacaactaaa-tgtgagaattagactcaccaaacaaccaaattgtgagaact 46692145  T
Q  247 atctt-actcacccaacaac 265  Q
    |  || ||||||||||||||    
T  46692146 agattaactcacccaacaac 46692165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 21875111 - 21875018
Alignment:
Q  444 atttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||| ||||||||||||||| |||||||| ||||   |||||||||| ||||||||| | |||||||||       ||||||||||||||||||||||||    
T  21875111 atttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaacccg-------tcagtcacatgacaacaactttac 21875019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 501
Target Start/End: Original strand, 50624949 - 50625072
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt--t 477  Q
    |||||||||||| || ||||||||| ||||||| | ||  ||||| |  ||||||  ||||||||  |||||||||||||||   |||||||| |||  |    
T  50624949 taaaaaagggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgctaccttacccttttttat 50625048  T
Q  478 acacaagaggctgtttccaggact 501  Q
    ||||||||||||||||| ||||||    
T  50625049 acacaagaggctgtttctaggact 50625072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 539
Target Start/End: Original strand, 1121260 - 1121382
Alignment:
Q  420 cagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgttt--tacacaagaggctgtttccaggacttgaacccgcaacctt 516  Q
    ||||||||| ||| || |||| |||||| ||||||||||||||||||| ||| | |||  ||||||||| | |||||||||||||| ||| ||  |||||    
T  1121260 cagggtctgagaaaggctcccgccattttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctt 1121359  T
Q  517 tcagtcacatgacaacaacttta 539  Q
    |||| |||  |||||||| ||||    
T  1121360 tcagccaccggacaacaaattta 1121382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 31672842 - 31672732
Alignment:
Q  393 cctggtgcactagagctcccgcatatacagggtctgggaaggga-tcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggct 489  Q
    |||||||||||| |||||||||| |   | | | ||||||| || |||||||||||||||||||||||||| |||| || ||  ||||||| || |||||    
T  31672842 cctggtgcactaaagctcccgcacacgtaagatatgggaagagagtcccaccatttggtgtattgtacgcactcttgccttgttttttacataataggct 31672743  T
Q  490 gtttccaggac 500  Q
    |||||||||||    
T  31672742 gtttccaggac 31672732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 28905041 - 28904941
Alignment:
Q  444 atttggtgtattgtacgcagtcttaccctgtt---ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||||||||| ||||| |||||||||| ||||   ||||||||||| ||||| || |||||| |||  |  || ||| ||||||||||||||||||||||    
T  28905041 atttggtgtaatgtacacagtcttaccttgttattttacacaagagactgttccctggacttaaacatgtgactttttagtcacatgacaacaactttac 28904942  T
Q  541 c 541  Q
    |    
T  28904941 c 28904941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 541
Target Start/End: Original strand, 829454 - 829601
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctgt--tttacacaagaggctgtt 492  Q
    ||||||||| |||||| |||||  ||||||  |||||||| |||||||| ||||||||||||||||||   ||||  |||  |||| |||||||| ||||    
T  829454 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgttctttagacaagaggttgtt 829553  T
Q  493 tccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || || |||||||| ||    |||||| |||| ||||||||||||||||    
T  829554 tctagaacttgaactcg-ggtctttcaatcacgtgacaacaactttacc 829601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 426
Target Start/End: Original strand, 6242282 - 6242327
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtc 426  Q
    |||||||||||||| |||||||||||||||| |||||| |||||||    
T  6242282 aaaaaagggcaacccggtgcactagagctcctgcatatgcagggtc 6242327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 431 - 533
Target Start/End: Complemental strand, 29106659 - 29106555
Alignment:
Q  431 aagggatcccaccatttggtgtattgtacgcagtcttaccc--tgttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatga 528  Q
    |||||||||||| ||||||||||||||||| |  |||| ||  | |||||||||||||| ||||| || |||||| |||||  | |||| || |||||||    
T  29106659 aagggatcccacaatttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtgatctttgagccacatga 29106560  T
Q  529 caaca 533  Q
    |||||    
T  29106559 caaca 29106555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 9627780 - 9627713
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| ||||||| ||||||| |||||  | |||||||||||| ||||| |||| |||||    
T  9627780 ttttacacaagagtctgtttctaggacttaaacccataccctttcagtcacgtgacaccaacgttacc 9627713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 26782431 - 26782364
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||  |||||| |||||||||| |||  |||||||| || |||||||| |||||||||    
T  26782431 ttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttacc 26782364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 42530879 - 42530844
Alignment:
Q  59 aagtgcaatgcaatcaatcagaagaatcaaaagggg 94  Q
    ||||| ||||||||||||||||||||||||||||||    
T  42530879 aagtgaaatgcaatcaatcagaagaatcaaaagggg 42530844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 432
Target Start/End: Complemental strand, 47624259 - 47624208
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaa 432  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||    
T  47624259 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 50295928 - 50295873
Alignment:
Q  34 caatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaatcaaa 89  Q
    |||||| | |||||||| | || |||||||||||||||||||||| ||||||||||    
T  50295928 caatcagaagaatcaaaagagggagaagtgcaatgcaatcaatcaaaagaatcaaa 50295873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 4495672 - 4495709
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcata 417  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  4495672 taaaaaagggcaacccggtgcactaaagctcccgcata 4495709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 10484615 - 10484667
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 435  Q
    |||||||||||| ||||||||| ||||||||||||  |||||||  |||||||    
T  10484615 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggg 10484667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 40390401 - 40390365
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcata 417  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  40390401 aaaaaagggcaacccggtgcactaaagctcccgcata 40390365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 4e-61; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 383 - 530
Target Start/End: Complemental strand, 32703558 - 32703411
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  32703558 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 32703459  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgaca 530  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||    
T  32703458 agaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 35710449 - 35710289
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||||| ||||||||||||||||||||||| || | || |||||||| |||||||||||||||||||| |||||| |||||||| |||||||    
T  35710449 aaaaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctattttaca 35710350  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  35710349 caagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttacc 35710289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 8169982 - 8170141
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    ||||||||||||| ||||||||  | ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  8169982 aaaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 8170081  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || |||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  8170082 aaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacc 8170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 41014454 - 41014295
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacac 481  Q
    |||||||||||| ||||||||| ||||||||||||| | |||||  ||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  41014454 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacac 41014355  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  41014354 aagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 41014295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 38879719 - 38879557
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||  |    
T  38879719 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 38879620  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  38879619 tacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 38879557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 24449028 - 24448866
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgtttta 478  Q
    |||||||||||||| ||||||||| |||||| |||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||||  | |||||    
T  24449028 aaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctatttttta 24448929  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  24448928 cacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 24448866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 4619103 - 4619265
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||| ||||||||| ||||| ||||||| | ||||| |||||||| ||||||||||  ||||||||||||||||| |||||||||||||  |    
T  4619103 aaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 4619202  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  4619203 cacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 4619265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 43334341 - 43334178
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt-- 477  Q
    ||||||||||||| ||||||||| |||||||||||   ||||||| |||||||| |||||||||||  |||||||||||||||| |||||||||||||      
T  43334341 aaaaagggcaacccggtgcactaaagctcccgcatcg-cagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 43334243  T
Q  478 -acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  43334242 tacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 43334178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 387 - 502
Target Start/End: Complemental strand, 7368528 - 7368413
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagag 486  Q
    |||||||| ||||||||||||||||| ||||| ||||||| |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttacacaagag 7368429  T
Q  487 gctgtttccaggactt 502  Q
    ||||||||||||||||    
T  7368428 gctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 1565566 - 1565407
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttaca 480  Q
    ||||||||||| ||||||||| ||||||| ||||| ||||||| |||||||| |||| |||||||||| ||||||||||| ||||   ||   ||||||     
T  1565566 aaagggcaacccggtgcacta-agctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagccttaatatgtttttttact 1565468  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1565467 caagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacc 1565407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 27328867 - 27328728
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggact 501  Q
    ||||||||||||  ||||||  |||||||| ||||||||||  ||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||    
T  27328867 agctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggact 27328768  T
Q  502 tgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| |  ||||||||||||||||||||||||||||||    
T  27328767 tgaacctgtgacctttcagtcacatgacaacaactttacc 27328728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 383 - 539
Target Start/End: Original strand, 22861668 - 22861823
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    ||||||||||   ||||||||||||||||||||||| ||||||  | |||||| |||||||||||| ||||||||  ||||||||||  |||||||||||    
T  22861668 aaaagggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgtgagcagtcttact-tgttttacaca 22861766  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||| ||| ||| |||||||||| |||  ||||||||||||||||||||||||||||    
T  22861767 agagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaacttta 22861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 454 - 541
Target Start/End: Original strand, 37024626 - 37024713
Alignment:
Q  454 ttgtacgcagtcttaccctgttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  37024626 ttgtacgcagccttaccctgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 37024713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 22600567 - 22600430
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgttttacacaagaggctgtttccaggacttg 503  Q
    ||||||||||||  |||| || |||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||| |   |||||||||||||||    
T  22600567 agctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttg 22600468  T
Q  504 aacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| |||||| ||||||||||| ||||||||||||    
T  22600467 aacccgtaaccttccagtcacatgataacaactttacc 22600430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 384 - 508
Target Start/End: Original strand, 13801767 - 13801895
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccctg--ttttac 479  Q
    ||||||||||| ||||||||| ||||| ||||||| | ||||| |||||||| |||||||||  |||||||||||||||||| |||||||||  ||||||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 13801866  T
Q  480 acaagaggctgtttccaggacttgaaccc 508  Q
    ||||||||||| |||||||||||||||||    
T  13801867 acaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 28516432 - 28516593
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttgg-tgtattgtacgcagtcttaccctgtttt--ac 479  Q
    |||||||||||||||| ||||| |||||| ||||   ||||||||||||| || ||||||||||| | |||||||||||||| | || ||||||||  ||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttac 28516531  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| |||||||| ||||||||||||  ||||||||| ||| ||||||||||||||||    
T  28516532 acaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 198 - 383
Target Start/End: Original strand, 11335393 - 11335572
Alignment:
Q  198 aaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatcttactcacccaacaactaaattgtgagcactagaccaaccaaacaaac 297  Q
    ||||||| |||||||| ||||| |||||||||| | || ||||||||||  |     |||| |||||  |||||||||||||| ||||  ||||||||||    
T  11335393 aaccaaattgtgagcattcgactcaccaaacaaccaaagtgtgagtacttcc-----caccaaacaaacaaattgtgagcacttgacccgccaaacaaac 11335487  T
Q  298 aaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaactgaacgaagctaaa 383  Q
    ||||||||||||||| ||| | |||||||| ||||| |||||||||||||| ||||||||| |||||||||||||| ||| |||||    
T  11335488 aaaccaattgtgagcactatcttgactcac-caacaaccaaacaaattgaaccaaacgaaatcaaatcaaactgaatgaaactaaa 11335572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 407 - 541
Target Start/End: Complemental strand, 2838890 - 2838754
Alignment:
Q  407 gctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacacaagaggctgtttccaggacttgaa 505  Q
    |||||||||||  ||||||| | |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||   |||||||     
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctgagacttgac 2838791  T
Q  506 cccgcaaccttt-cagtcacatgacaacaactttacc 541  Q
    | ||  |||||| ||||||||||||||||||||||||    
T  2838790 ctcgtgacctttacagtcacatgacaacaactttacc 2838754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 540
Target Start/End: Complemental strand, 22187422 - 22187262
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||||||| ||||||| |||||| ||||||  ||||| ||||||||| || ||   |||  ||||||||||||||||||||| | ||||||  ||    
T  22187422 aaagggcaacctgatgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttac 22187323  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||||||||||||||||||| |||| |  |||||||||||| ||||||||||||||||    
T  22187322 acaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttac 22187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 478
Target Start/End: Original strand, 34154814 - 34154908
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttta 478  Q
    ||||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgattta 34154908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 380 - 534
Target Start/End: Complemental strand, 1405326 - 1405170
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgtttt 477  Q
    ||||||||||||| | |||| |||||||||||||||||| ||||||   |||| || ||||||||||||||||||||||||||  ||||| |  | ||||    
T  1405326 taaaaaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgcaaacttactctatttttt 1405227  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaa 534  Q
    | | |||||| |||||||||||||||||||||  |||||  ||||||||||||||||    
T  1405226 atataagaggttgtttccaggacttgaacccgtgaccttctagtcacatgacaacaa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 19142940 - 19143101
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttac 479  Q
    |||||||||||  |  |||||||| | ||||||||||  || |||| |||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||    
T  19142940 aaaaaagggcaggccagtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtttttac 19143039  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| ||||||||||||||||||| |   | ||| |||||| ||||||||| ||||||    
T  19143040 acaagaggttgtttccaggacttgaacctgtggcattttagtcacgtgacaacaattttacc 19143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 385 - 537
Target Start/End: Original strand, 12006329 - 12006485
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat--ttggtgtattgtacgcagtcttaccc--tgttttaca 480  Q
    |||||||||  ||||||||| ||||||||||||  |||||||||||||||| |||||||||  ||||||||||||| | || |||||||  | |||||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttaca 12006428  T
Q  481 caagaggctgtttccaggacttgaa-cccgcaacctttcagtcacatgacaacaactt 537  Q
     |||||| |||||||| |||||||| ||||  ||||||||||||||||||||||||||    
T  12006429 taagaggttgtttcca-gacttgaaccccgtgacctttcagtcacatgacaacaactt 12006485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 506
Target Start/End: Complemental strand, 43574729 - 43574617
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt--tacacaagaggctgttt 493  Q
    ||||| ||| ||||||||||||  ||||||| |||||||| |||||||||||||| |||||||||||| ||||||||||||  ||||||||||  |||||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgttt 43574630  T
Q  494 ccaggacttgaac 506  Q
    |||||||||||||    
T  43574629 ccaggacttgaac 43574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 539
Target Start/End: Original strand, 24323727 - 24323862
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttg 503  Q
    |||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||  |||||||||  |||||||||||||| ||||||||| |||||    
T  24323727 agctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttg 24323826  T
Q  504 aacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||     || ||||||||||| || ||||||||||    
T  24323827 aacatttgacatttcagtcacacgataacaacttta 24323862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 406 - 539
Target Start/End: Original strand, 24360351 - 24360486
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttg 503  Q
    |||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||  |||||||||  |||||||||||||| ||||||||| |||||    
T  24360351 agctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaacttg 24360450  T
Q  504 aacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||     || ||||||||||| || ||||||||||    
T  24360451 aacatttgacatttcagtcacacgataacaacttta 24360486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 396 - 541
Target Start/End: Original strand, 208939 - 209086
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgttt 493  Q
    ||||||||| |||||  |||||  |||||||  ||||||| ||||||||||| ||||||||| | |||| ||||||||||||| |||||||||| ||||     
T  208939 ggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttg 209038  T
Q  494 ccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||  |  |||||| |||||||||||||||||||||||    
T  209039 ccaggacttgaacttgtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 384 - 493
Target Start/End: Original strand, 7097760 - 7097870
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttacaca 482  Q
    |||||||| | |||||||||| ||||||||||||  ||||||  |||||||| || |||||||||||||||||||||||  ||||||||| |||||||||    
T  7097760 aaagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacaca 7097859  T
Q  483 agaggctgttt 493  Q
    |||||||||||    
T  7097860 agaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 384 - 492
Target Start/End: Original strand, 16880647 - 16880757
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacac 481  Q
    |||||| |||| ||||||||| ||||||||||||  || |||| |||||| | || |||||||||||||||||||||||| |||||||||  ||||||||    
T  16880647 aaagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacac 16880746  T
Q  482 aagaggctgtt 492  Q
    |||||||||||    
T  16880747 aagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 385 - 498
Target Start/End: Complemental strand, 20135740 - 20135623
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--aca 480  Q
    |||||||||| ||||||||  |||||| |||||| | ||||| |||||||| ||||||||||  ||||||||||||||||| |||||| ||||||  |||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  481 caagaggctgtttccagg 498  Q
    ||||||||||||||||||    
T  20135640 caagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 396 - 533
Target Start/End: Complemental strand, 1850762 - 1850624
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttc 494  Q
    ||||||||| |||| ||||||   |||||||  ||||| | |||||||||||| |||||||||||||  ||||  ||||||| |||||||||| | ||||    
T  1850762 ggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttc 1850663  T
Q  495 caggacttgaacccgcaacctttcagtcacatgacaaca 533  Q
    | |||||||||||||  ||||||||||||||||||||||    
T  1850662 cgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 459
Target Start/End: Complemental strand, 16957450 - 16957374
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtac 459  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||||||||||||||||||||||    
T  16957450 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 421 - 541
Target Start/End: Complemental strand, 39301222 - 39301099
Alignment:
Q  421 agggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgtttta--cacaagaggctgtttccaggacttgaacccgcaaccttt 517  Q
    |||||| |||||||| ||||||| ||| |||| ||| ||||||  ||||||||||||||  ||||||||| |||| ||| ||||||||||||  ||||||    
T  39301222 agggtccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgaccttt 39301123  T
Q  518 cagtcacatgacaacaactttacc 541  Q
    |||| |||||||||||||||||||    
T  39301122 cagtaacatgacaacaactttacc 39301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 23974823 - 23974756
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  23974823 ttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 23974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 424 - 532
Target Start/End: Original strand, 22907904 - 22908014
Alignment:
Q  424 gtctggga-agggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagt 521  Q
    |||||||| |||| |||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||||  ||||||||||||   ||||||||||    
T  22907904 gtctgggagaggggtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagt 22908003  T
Q  522 cacatgacaac 532  Q
    ||||| |||||    
T  22908004 cacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 539
Target Start/End: Complemental strand, 30006456 - 30006303
Alignment:
Q  388 ggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt--tttacacaaga 485  Q
    ||||||| ||||||||| |||||||||||| | |||  | |||||||| ||||||||||| ||||| ||||| ||| ||||||||||  |||| | ||||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataaga 30006357  T
Q  486 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    || ||||| | ||||||||| |    ||||||||||||||||||||||| ||||    
T  30006356 ggttgttttccggacttgaatctatgacctttcagtcacatgacaacaaattta 30006303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 477
Target Start/End: Original strand, 9794390 - 9794471
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||| |||| | |||||| | ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  9794390 ggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 11335279 - 11335355
Alignment:
Q  21 ggagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaatcaaaagggggaga 98  Q
    ||||||||| ||||||||||| |||| ||| |||| |||||||||||||||||||||||||||||||| |||||||||    
T  11335279 ggagaagtgaaatcaatcaaaagaatgaaaagggg-agaagtgcaatgcaatcaatcagaagaatcaatagggggaga 11335355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 11335361 - 11335466
Alignment:
Q  137 aatcaatcaaaggaatcaaaagggag-gaagaaaccaaattgtgagtactt-actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaacca 234  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||| | |  ||||||||||||||||||||||||| |||   |||||||||||||| |    
T  11335361 aatcaatcaaaagaatcaaaagggggagaagaaaccaaattgtgagcattcgactcaccaaacaaccaaagtgtgagtact--tcccaccaaacaaacaa 11335458  T
Q  235 attgtgag 242  Q
    ||||||||    
T  11335459 attgtgag 11335466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 477
Target Start/End: Complemental strand, 3771475 - 3771381
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||| || ||||||||| ||||||| |||| |||| ||| |||||||| |||||||| |||||||||||| | ||| |||||||||||||    
T  3771475 aaaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctgtttt 3771381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 443
Target Start/End: Original strand, 16028621 - 16028683
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacc 443  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  16028621 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 497
Target Start/End: Complemental strand, 29334532 - 29334415
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt-tggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||| || |||||| || || |||| ||||  ||||||| ||||| || |||||||||| ||||||||||||||||| |||||| ||||||  ||    
T  29334532 aaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttac 29334433  T
Q  480 acaagaggctgtttccag 497  Q
    ||||||||||||||||||    
T  29334432 acaagaggctgtttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 525
Target Start/End: Original strand, 42924842 - 42924977
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggt--ctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--acacaagaggct 489  Q
    ||||||||| |||| |||||||  ||||||  |||||||||||| ||| |||||  |||||||||||||||  |||||||||||||  |||||||| | |    
T  42924842 ggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttttacacaagatgtt 42924941  T
Q  490 gtttccaggacttgaacccgcaacctttcagtcaca 525  Q
    |||| |||||||||||| ||  ||||||||||||||    
T  42924942 gttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 445 - 541
Target Start/End: Complemental strand, 31299705 - 31299608
Alignment:
Q  445 tttggtgtattgtacgcagtcttaccctgttttac-acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||| ||||||||||||||| |||| ||||||||  ||||||||||||||| |||||||||||  |  |||| | |||||||||||||||||||||||    
T  31299705 tttgatgtattgtacgcagttttacactgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttacc 31299608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 41426043 - 41425956
Alignment:
Q  424 gtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacccg 509  Q
    |||||||||||| |||||||| ||||||||||||| |||| |||||||||  |||||||||| | | ||||||||| |||||||||||    
T  41426043 gtctgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccg 41425956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 9511880 - 9511813
Alignment:
Q  164 aagaaaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    |||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  9511880 aagaaatcaaattgtgagtatttaactcaccaaacaaccaaattgtgagcactcgactcaccaaacaa 9511813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 9511845 - 9511742
Alignment:
Q  168 aaccaaattgtgagtactt-actcaccaaacaaccaaagtgtgagcactcgacccaccaaac----aaaccaattgtgagtactatctt-actcacccaa 261  Q
    |||||||||||||| |||  ||||||||||||||| ||||||||||||||||| ||||||||    |||| ||||||||| |||||||| ||||||| ||    
T  9511845 aaccaaattgtgagcactcgactcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaacgaattgtgaggactatcttaactcacctaa 9511746  T
Q  262 caac 265  Q
    ||||    
T  9511745 caac 9511742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 406 - 537
Target Start/End: Original strand, 34074584 - 34074717
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttg 503  Q
    ||||||| ||||  |||||| |||||||||  ||  ||||||||||||||| |||||  |||||  ||||||  ||||||||||||||||| ||||||||    
T  34074584 agctcccccatacgcagggtttgggaaggggccctgccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttg 34074683  T
Q  504 aacccgcaacctttcagtcacatgacaacaactt 537  Q
    |||  |  ||||||||||||  ||||||||||||    
T  34074684 aacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 9511961 - 9511882
Alignment:
Q  20 gggagaagtgtaatcaatcaaaggaatcaaatgggg--cagaagtgcaatgcaatcaatcag-aagaatcaaaaggggga 96  Q
    |||||||||| ||||||||| | |||||||| ||||  ||||||||||||||||||||| || |||||||||||||||||    
T  9511961 gggagaagtgcaatcaatcagaagaatcaaaaggggatcagaagtgcaatgcaatcaattagaaagaatcaaaaggggga 9511882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 502
Target Start/End: Original strand, 5873322 - 5873441
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccct-gttttacaca 482  Q
    |||||||| || | ||||||| ||||||||||||  ||| ||| ||| |||  |||||||| |||||||| |||||  || ||||||||  |||||||||    
T  5873322 aaagggcatcccgatgcactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtacttagccttaccctatttttacaca 5873421  T
Q  483 agaggctgtttccaggactt 502  Q
    |||||||||||||| |||||    
T  5873422 agaggctgtttccacgactt 5873441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 443
Target Start/End: Original strand, 30877564 - 30877623
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacc 443  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||| |||||||| |||||||    
T  30877564 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 374
Target Start/End: Complemental strand, 9511825 - 9511703
Alignment:
Q  252 actcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatca 351  Q
    ||||||| ||||||  || |||||||||| |||  ||||||||||||||| |||||||||  ||| | | ||||||  |||| ||||||||||| || ||    
T  9511825 actcaccaaacaaccgaagtgtgagcactcgactcaccaaacaaacaaacgaattgtgaggactatcttaactcacctaacaaccaaacaaattcaacca 9511726  T
Q  352 aacgaaaccaaatcaaactgaac 374  Q
    | |||| ||||||||||| ||||    
T  9511725 agcgaatccaaatcaaaccgaac 9511703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 487 - 541
Target Start/End: Complemental strand, 17419944 - 17419890
Alignment:
Q  487 gctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||| ||||||    
T  17419944 gctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttacc 17419890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 499
Target Start/End: Original strand, 12575660 - 12575779
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccctgt---tttac 479  Q
    |||||||| || ||||||| | |||||| |||||  |||||||  ||||||| |||||||| ||||||||||||||||||   ||| |||||   |||||    
T  12575660 aaagggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgcaactttagcctgtttatttac 12575759  T
Q  480 acaagaggctgtttccagga 499  Q
     |||||||||||||||||||    
T  12575760 gcaagaggctgtttccagga 12575779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 19438800 - 19438759
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtc 426  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  19438800 aagggcaacctggtgcactagagctcccgcatatgcagggtc 19438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 13774988 - 13774920
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagt 464  Q
    ||||||||| ||||||||||||  ||||||| || |||||||||  |||||||||||||||| ||||||    
T  13774988 ggtgcactaaagctcccgcatacgcagggtccggaaagggatcctgccatttggtgtattgtgcgcagt 13774920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 522
Target Start/End: Complemental strand, 22025586 - 22025538
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtc 522  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||    
T  22025586 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtc 22025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 32354263 - 32354211
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 435  Q
    |||||||||||| ||||||||| |||||||||||| |||||||| ||||||||    
T  32354263 aaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 92
Target Start/End: Original strand, 11335165 - 11335200
Alignment:
Q  57 agaagtgcaatgcaatcaatcagaagaatcaaaagg 92  Q
    ||||||||||||||||||||||||||||||||||||    
T  11335165 agaagtgcaatgcaatcaatcagaagaatcaaaagg 11335200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 24136790 - 24136719
Alignment:
Q  283 accaaccaaacaaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaac 354  Q
    ||||| ||||| |||||||||||||||||| |||   |||||||| ||||| |||||||||||||| |||||    
T  24136790 accaaacaaacgaacaaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 24136719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 11335424 - 11335510
Alignment:
Q  168 aaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaa----caaaccaattgtgagtactatctt 251  Q
    ||||||| ||||||||||| | |||||||||| |||| |||||||||| ||||| |||||    ||||||||||||||| ||||||||    
T  11335424 aaccaaagtgtgagtacttcc-caccaaacaaacaaattgtgagcacttgacccgccaaacaaacaaaccaattgtgagcactatctt 11335510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 24136978 - 24136896
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtactt-actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    |||||| ||||| ||||||||| |||||||||| |||  |||||||||||||||||| |||||| | ||| | ||||||||||    
T  24136978 gaatcagaaggggggaagaaacaaaattgtgagcactcgactcaccaaacaaccaaattgtgagaagtcggctcaccaaacaa 24136896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 446
Target Start/End: Complemental strand, 25622595 - 25622533
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt 446  Q
    ||||||||| | ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||    
T  25622595 aaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 541
Target Start/End: Original strand, 39079875 - 39079925
Alignment:
Q  491 tttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| ||||||||||||  ||||||| ||||||||||||||||||||||    
T  39079875 tttccaagacttgaacccgtgacctttctgtcacatgacaacaactttacc 39079925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 39801652 - 39801591
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 444  Q
    |||| ||||||| ||||||||| ||||||||||||   ||||||||||||||| ||||||||    
T  39801652 aaaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 4654426 - 4654478
Alignment:
Q  395 tggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt 447  Q
    |||||||||| ||||||||||||| ||||||  | ||||||||||||||||||    
T  4654426 tggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccattt 4654478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 537
Target Start/End: Original strand, 10634238 - 10634301
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    |||| |||| |||| |||||| |||||||||||||   ||||||||||||| ||||||||||||    
T  10634238 ttttgcacacgaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaactt 10634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 11657695 - 11657785
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttac 469  Q
    |||||||||||| || |||| |||| || |||||| | | ||||||  |||||||| |||||||| |||||||||||||| |||| |||||    
T  11657695 taaaaaagggcagcccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccaccattttggtgtattgtatgcagccttac 11657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 10943842 - 10943914
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtat 454  Q
    ||||||||||| || ||||||||| ||||||||||| | ||||||| |||||||| ||||   |||||||||||    
T  10943842 aaaaaagggcagcccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtcccgttatttggtgtat 10943914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 11335350 - 11335391
Alignment:
Q  20 gggagaagtgtaatcaatcaaaggaatcaaatggggcagaag 61  Q
    |||||||||||||||||||||| |||||||| |||| |||||    
T  11335350 gggagaagtgtaatcaatcaaaagaatcaaaagggggagaag 11335391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 457
Target Start/End: Original strand, 10306496 - 10306548
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgt 457  Q
    ||||||||||||  ||||||| |||||||| |||||||| |||||||||||||    
T  10306496 agctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 418
Target Start/End: Complemental strand, 11462958 - 11462926
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatat 418  Q
    ||||||||| |||||||||||||||||||||||    
T  11462958 agggcaacccggtgcactagagctcccgcatat 11462926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 24137040 - 24136984
Alignment:
Q  149 gaatcaaaagggaggaagaaaccaaattgtgagtact-tactcaccaaacaaccaaa 204  Q
    |||||||| |||  ||||||||||||||||||| |||  ||||||||||||||||||    
T  24137040 gaatcaaagggggagaagaaaccaaattgtgagaactagactcaccaaacaaccaaa 24136984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 24137114 - 24137051
Alignment:
Q  167 aaaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaa 230  Q
    ||||||||||||||| ||| | ||||||||||||||||| |||||| ||| ||| ||||||||||    
T  24137114 aaaccaaattgtgagcactcaactcaccaaacaaccaaa-tgtgagaactagactcaccaaacaa 24137051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 383 - 537
Target Start/End: Original strand, 21779260 - 21779414
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  21779260 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacaca 21779359  T
Q  483 agaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  21779360 agaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaactt 21779414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 23397899 - 23397742
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaa 483  Q
    ||||||||||| |||||||||||||||||||||||  |||||| | |||||| |||||||||||||||||||||||| || |||||||| ||||||||||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctattttacacaa 23397800  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  23397799 gaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacc 23397742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 9671315 - 9671156
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9671315 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 9671216  T
Q  483 agaggctgtttccaggacttgaacccgcaaccttt-cagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||| |||||||||  || ||| ||||||||||||||||||||||||    
T  9671215 agaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttacc 9671156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 8455315 - 8455475
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgttttaca 480  Q
    |||||||||||| ||||||||| |||||| |||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||||  |||||||||    
T  8455315 aaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttaca 8455414  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  8455415 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 8455475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 25249735 - 25249896
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt-tac 479  Q
    |||||||||||||| ||||||||| ||||| ||||||  ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  25249735 aaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtttgtac 25249834  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| ||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||    
T  25249835 acaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttacc 25249896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 384 - 539
Target Start/End: Complemental strand, 10543835 - 10543676
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||||||||||  |||||||||||||||| |||||||||||||  ||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttac 10543736  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  10543735 acaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10543676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 14530455 - 14530294
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||  |||||||||||||| || |||||||||||||  |     
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttat 14530356  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  14530355 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 14530294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 381 - 526
Target Start/End: Complemental strand, 14444866 - 14444720
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttac 479  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||| |||||||| |||||||||||||||||| |||| ||| ||||||||| ||||||    
T  14444866 aaaaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttttac 14444767  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||    
T  14444766 acaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 11514571 - 11514412
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--aca 480  Q
    |||||||||| | ||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||  |||    
T  11514571 aaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttactttgttttttaca 11514473  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||    
T  11514472 caagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttacc 11514412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 24200622 - 24200784
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||| ||||||||| ||||| | ||||  ||||||| |||||||| |||||||||||  |||||||||||||||| |||||||||||||  |    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttttta 24200721  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  24200722 cacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacc 24200784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 381 - 526
Target Start/End: Complemental strand, 10546301 - 10546153
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---tttt 477  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||   ||||    
T  10546301 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttt 10546202  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacat 526  Q
    | |||||||| |||||||||||||||||||||  |||||||||||||||    
T  10546201 atacaagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 420 - 541
Target Start/End: Original strand, 12023955 - 12024077
Alignment:
Q  420 cagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttc 518  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  12023955 cagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttc 12024054  T
Q  519 agtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||    
T  12024055 agtcacatgacaacaactttacc 12024077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 378 - 541
Target Start/End: Complemental strand, 17668143 - 17667978
Alignment:
Q  378 gctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tt 475  Q
    ||||||||||||||||| ||||||||| |||||||  |||  ||||||  | |||||| | ||||||||||||||||||||||||| |||||||||  ||    
T  17668143 gctaaaaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgattt 17668044  T
Q  476 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||| | |||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  17668043 ttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 17667978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 400 - 540
Target Start/End: Original strand, 99281 - 99421
Alignment:
Q  400 cactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttccagga 499  Q
    ||||| |||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||| ||| || ||||||  ||||||||||||||| ||||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgttttttacaagaggctgtttctagga 99380  T
Q  500 cttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||||||  ||||||||||||| |||||||||||||||    
T  99381 cttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 380 - 537
Target Start/End: Original strand, 19977710 - 19977869
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgtttt 477  Q
    |||||||||| || ||||||||||| |||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||  |||| ||  | ||||    
T  19977710 taaaaaagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctatttttt 19977809  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactt 537  Q
    ||| |||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||    
T  19977810 acaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaactt 19977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 27573757 - 27573597
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt-taca 480  Q
    ||||||||||||| | ||||||| ||||||| |||| ||||||| ||||||  | | ||||||||||||||||||||||||| |||||| ||||| ||||    
T  27573757 aaaaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgtttataca 27573658  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||| || |||||||||||    ||||||||||||||||||||||||||||||    
T  27573657 caagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactttacc 27573597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 393 - 541
Target Start/End: Original strand, 32781298 - 32781447
Alignment:
Q  393 cctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctg 490  Q
    |||||||||| | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||    
T  32781298 cctggtgcacaa-agctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttg 32781396  T
Q  491 tttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||  ||||||||| ||  |||||||||  ||||  |||||||||||||    
T  32781397 tttccgagacttgaactcgtgacctttcagcaacattgcaacaactttacc 32781447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 378 - 541
Target Start/End: Complemental strand, 17623705 - 17623540
Alignment:
Q  378 gctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tt 475  Q
    |||||||||||||||||  |||||||| |||| || ||||  |||| |  |||||||| | ||||||||||||||||||||||||| |||||||||  ||    
T  17623705 gctaaaaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgattt 17623606  T
Q  476 ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||| |||||| ||||||||||||||  ||||| ||||| ||||||||||||||||||    
T  17623605 ttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttacc 17623540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 419 - 541
Target Start/End: Complemental strand, 22371154 - 22371033
Alignment:
Q  419 acagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttccaggacttgaacccgcaacctttc 518  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||  ||||  |    
T  22371154 acagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacgaggctgtttccaggacttgaacccgtgacctccc 22371056  T
Q  519 agtcacatgacaacaactttacc 541  Q
    |||||||||||||||||||||||    
T  22371055 agtcacatgacaacaactttacc 22371033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 381 - 501
Target Start/End: Complemental strand, 36871629 - 36871509
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-ac 479  Q
    |||||||||||||| ||||||||| ||||||||||||  |||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||    
T  36871629 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcac 36871531  T
Q  480 acaagaggctgtttccaggact 501  Q
    ||||||||||||||||||||||    
T  36871530 acaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 383 - 539
Target Start/End: Complemental strand, 5841166 - 5841006
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--a 478  Q
    |||||||||||  ||||||||| ||||||||||||| | ||||| |||||||| ||||||||||  || |||||||||||||  |||||||| ||||  |    
T  5841166 aaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctatttttta 5841067  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    ||||| |||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||    
T  5841066 cacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 7214674 - 7214510
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttg--gtgtattgtacgcagtcttaccctgt--tt 476  Q
    |||||| ||||||||||||||||| | ||| ||||||  ||| ||| | ||||||||| ||||||||   ||||||||||||||| ||||||||||  ||    
T  7214674 aaaaaaaggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattt 7214575  T
Q  477 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||| ||||||||| |||||||||||   ||||||||||||||||||||||||||||||    
T  7214574 tacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttacc 7214510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 25079717 - 25079877
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttaca 480  Q
    ||||||||||| ||||||||| |||||  |||||  ||||||| |||||||| |||||||||| |||||||||||||||  |||||| ||   |||||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttaca 25079816  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| |||||| | ||||||||||||  ||||| ||||||||||||||||||||||||    
T  25079817 caagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttacc 25079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 14544201 - 14544039
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtg--tattgtacgcagtcttaccctgtttt---a 478  Q
    |||||||||| |||||||||| ||||||||||||  |||||||  ||||||| ||| |||||||  ||  ||||| ||||||||||||||||||||   |    
T  14544201 aaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttcta 14544102  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||| || || ||| | |||||||||||||||||||||||||||||||    
T  14544101 cacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttacc 14544039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 382 - 541
Target Start/End: Complemental strand, 17896397 - 17896235
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt---a 478  Q
    ||||||||||||  | ||||||| ||||||| ||||  ||||||| | |||||| |||||||||||||| |||||||||||| |||||||| ||||   |    
T  17896397 aaaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctattttttta 17896298  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| |||||| |||||||||| |||  ||||||| ||||||||||||||||||||||    
T  17896297 cacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaactttacc 17896235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 383 - 541
Target Start/End: Original strand, 39914305 - 39914465
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt---ac 479  Q
    |||||||||||| | ||||||| ||||||||||||  ||||||| || ||||| |||||||||| |||||||||||| ||  |||||||||||||   ||    
T  39914305 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttac 39914403  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||| ||||||||| |||||| ||||  ||||| ||||||||||||||||||||||||    
T  39914404 acaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttacc 39914465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 406 - 541
Target Start/End: Original strand, 21377095 - 21377232
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttg 503  Q
    ||||||| ||||  ||||||  |||||||| ||||||||||||||| ||||||| ||| |||||||||||||  |||||||||| |||||| | ||||||    
T  21377095 agctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttg 21377194  T
Q  504 aacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||| || |||||||||||||||||||||||||||||||    
T  21377195 aactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 429 - 539
Target Start/End: Complemental strand, 5450376 - 5450263
Alignment:
Q  429 ggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcaca 525  Q
    ||||||| ||||||| ||||||||||||||||||| |||||| ||||||   |||||||||| ||||||||||| |||||||||  ||||||||||||||    
T  5450376 ggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcaca 5450277  T
Q  526 tgacaacaacttta 539  Q
    ||||||||||||||    
T  5450276 tgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 406 - 541
Target Start/End: Complemental strand, 33795398 - 33795261
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtatt-gtacgcagtcttaccctgtttt--acacaagaggctgtttccaggactt 502  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||||||| |||||||| |||||||||||||  || ||||||| ||||||| ||||||    
T  33795398 agctcccgcatacacagggtctgggaaggggtcccaccata-ggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggactt 33795300  T
Q  503 gaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||  |||||||| |||| ||||||||||||||||    
T  33795299 gaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 381 - 502
Target Start/End: Complemental strand, 30826173 - 30826052
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccct-gttttac 479  Q
    |||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||  ||||||||  ||||||    
T  30826173 aaaaaaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaaggg-ttccaccatttggtgtattgtacgcaaccttaccctatttttac 30826075  T
Q  480 acaagaggctgtttccaggactt 502  Q
    ||||||||||||||||| |||||    
T  30826074 acaagaggctgtttccaagactt 30826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 24859985 - 24860145
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-ac 479  Q
    |||||| ||||| | ||||||||| ||||||||||||  ||||||| | |||||| | | ||||||||||||||||||||||| || ||| |||||| ||    
T  24859985 aaaaaaaggcaatccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcagcct-accatgtttttac 24860083  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    || ||||| |||||||||| ||| |||||| |||||| ||||||||||||||||| ||||||    
T  24860084 accagaggttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaattttacc 24860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 381 - 532
Target Start/End: Complemental strand, 25641639 - 25641487
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt-ac 479  Q
    |||||||| ||| | ||| ||||| ||||| ||||||  |||| |  |||||||| |||||| |||||||||||||||||||   |||||||||||| ||    
T  25641639 aaaaaaggacaatccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgttttcac 25641540  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaac 532  Q
    |||| | |||||||||||||||||||||||  |||||||||||||||||||||    
T  25641539 acaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 384 - 541
Target Start/End: Original strand, 40416871 - 40417030
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acac 481  Q
    ||||||||||| ||||||||| ||||| ||||||| |||||||    || || ||||| || |||||||||||||| ||| ||| |||||||||  | ||    
T  40416871 aaagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttatac 40416970  T
Q  482 aagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||| |||||||| ||||||||||||  ||||| ||||||||||||||||||||||||    
T  40416971 aagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacc 40417030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 382 - 539
Target Start/End: Original strand, 31158437 - 31158598
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtcttaccctg--tttt 477  Q
    ||||||| ||| | |||| |||| ||||||||||||  |||||||||||||||| ||||||||  |||||| ||||||| ||| ||||||||||  ||||    
T  31158437 aaaaaggacaatcaggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgtttttt 31158536  T
Q  478 acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    || |||||||||||||  | ||||| |||||   ||||||||||||||||||||||||||||    
T  31158537 acgcaagaggctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 44643659 - 44643498
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg---ttttac 479  Q
    ||||||||| || |||||||||  |||||||||||  |||||||||||||||| ||||||||||||||  ||||||||||| ||||| |||   ||||||    
T  44643659 aaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttttac 44643560  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
      |||||||| |||| || |||||||| ||  |||||||||||||||||  |||||||||||    
T  44643559 ggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacc 44643498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 187 - 374
Target Start/End: Original strand, 1173572 - 1173760
Alignment:
Q  187 actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtactatcttactcacccaacaactaaattgtgagcactagacca 286  Q
    |||||||||||||||||| | |||| ||||||| |||||||||||| |||| |||| |||     || |||| |||||  ||||| |||||||| ||||     
T  1173572 actcaccaaacaaccaaaatatgagtactcgactcaccaaacaaacaaattatgagcactcg---acccaccaaacaaacaaattatgagcacttgaccc 1173668  T
Q  287 accaaa----caaacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaactgaac 374  Q
    ||||||    |||||||||||||| ||||  ||| | ||||||||  |||| ||||||||||| ||||||||||||||||||||||||||||    
T  1173669 accaaacaaacaaacaaaccaattttgagaactatcttgactcacctaacaaccaaacaaatttaatcaaacgaaaccaaatcaaactgaac 1173760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 387 - 541
Target Start/End: Original strand, 4516354 - 4516510
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaag 484  Q
    ||||| || ||| ||||| |||| || ||||  ||||||| |||||||| |||||||| ||||||||||||||||||  || |||||  |||||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaag 4516453  T
Q  485 aggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||| || |||||||   |  ||||||||||||| ||||||||||||||||    
T  4516454 aggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc 4516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 406 - 537
Target Start/End: Original strand, 17380259 - 17380391
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttt-tacacaagaggctgtttccaggacttga 504  Q
    |||||||||||   |||||||  ||||||| | ||| |||||||||||||| || ||  |||||||||||| ||||||||||| |||||||| |||||||    
T  17380259 agctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttatacacaagaggttgtttccaagacttga 17380358  T
Q  505 acccgcaacctttcagtcacatgacaacaactt 537  Q
    |||||  ||||||| ||||||||||||||||||    
T  17380359 acccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 384 - 497
Target Start/End: Original strand, 40762234 - 40762349
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgttttacac 481  Q
    ||||||||||| ||||||||| ||||||| ||||  |||||||  |||| || |||||||||||||||||||||||| || |||||||  | ||||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacac 40762333  T
Q  482 aagaggctgtttccag 497  Q
    ||||||||||||||||    
T  40762334 aagaggctgtttccag 40762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 422 - 541
Target Start/End: Original strand, 23145736 - 23145857
Alignment:
Q  422 gggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttca 519  Q
    ||||| ||||| || |||||||| |||||||||||||||||| ||||| |||||||  ||||||||| |||||| || ||||||||||||  ||||||||    
T  23145736 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23145835  T
Q  520 gtcacatgacaacaactttacc 541  Q
    |||||   ||||||||||||||    
T  23145836 gtcacgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 422 - 541
Target Start/End: Original strand, 23557526 - 23557647
Alignment:
Q  422 gggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttgaacccgcaacctttca 519  Q
    ||||| ||||| || |||||||| |||||||||||||||||| ||||| |||||||  ||||||||| |||||| || ||||||||||||  ||||||||    
T  23557526 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23557625  T
Q  520 gtcacatgacaacaactttacc 541  Q
    |||||   ||||||||||||||    
T  23557626 gtcacgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 447 - 541
Target Start/End: Complemental strand, 17705567 - 17705471
Alignment:
Q  447 tggtgtattgtacgcagtcttaccctgtt--ttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||| ||| ||||| |||||  ||||||||||||| ||||||||||||||||||||  |||||  |||||||||||||||||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttacc 17705471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 380 - 540
Target Start/End: Original strand, 45235813 - 45235976
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtt---t 476  Q
    |||||| ||||||| |||| ||||| |||||| |||||   ||||||||| ||||| ||||||||||| |||||||  ||| || |||||||| ||   |    
T  45235813 taaaaaggggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattt 45235912  T
Q  477 tacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||| ||||| ||||||| ||||||||||| ||  | ||||||||||||||| |||||||||||    
T  45235913 tacagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 508
Target Start/End: Original strand, 15296403 - 15296533
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgt--ttt 477  Q
    ||||||||||| ||||| |||| | |||| || ||||  ||||||| | ||||||||||||| |||| ||| |||||||||||| ||||||||||  |||    
T  15296403 aaaaaagggcagcctggcgcaccaaagcttccacatacgcagggtccgagaagggatcccactattttggtatattgtacgcagccttaccctgtatttt 15296502  T
Q  478 acacaagaggctgtttccaggacttgaaccc 508  Q
    |||||| ||||||||||| ||||||||||||    
T  15296503 acacaacaggctgtttccgggacttgaaccc 15296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 528
Target Start/End: Complemental strand, 19615117 - 19614981
Alignment:
Q  395 tggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatt--tggtgtattgtacgcagtcttaccctgtttt--acacaagaggctg 490  Q
    |||||||||| |||||| |||||  ||||||  |||||||| ||| || |||  |||| ||||||||||||||||||||||||||  | |||||||| ||    
T  19615117 tggtgcactaaagctcctgcatacgcagggttcgggaaggggtcc-actattattggtatattgtacgcagtcttaccctgttttttatacaagaggatg 19615019  T
Q  491 tttccaggacttgaacccgcaacctttcagtcacatga 528  Q
    |||| ||||||||||||||  |||||||||||||||||    
T  19615018 tttcaaggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 406 - 541
Target Start/End: Original strand, 44521395 - 44521532
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttg 503  Q
    |||||||| |||| ||  |||||||||||| |||| |||||||||||||| || |||| |||||| ||  |||||||||||||  |||||||| || |||    
T  44521395 agctcccgtatatgcaatgtctgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttg 44521494  T
Q  504 aacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||| ||  ||||||||||||| ||| ||||||||||||    
T  44521495 aacgcgtgacctttcagtcacgtgataacaactttacc 44521532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 477
Target Start/End: Complemental strand, 25632644 - 25632551
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||||| ||||||||| ||||||||||||   | |||  ||||||| |||||||||||||||||||||||||||| |||| ||||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgtttt 25632551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 26684618 - 26684781
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttacc---ctgtttta 478  Q
    ||||||| ||| | |||||| || ||||||||||||  ||||||  |||||| | ||||||||||| || |||||||||||| ||||||    | |||||    
T  26684618 aaaaaggacaatccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatattttttta 26684717  T
Q  479 cacaagagg-ctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| |||||| |||||||| ||||    |||||||| |||||||||||||||||||||    
T  26684718 cacaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttacc 26684781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 464 - 539
Target Start/End: Complemental strand, 44604908 - 44604832
Alignment:
Q  464 tcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| |  ||||| ||||||||||||||||||||||    
T  44604908 tcttaccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 445 - 541
Target Start/End: Original strand, 29419946 - 29420048
Alignment:
Q  445 tttggtgtattgtacgcag----tcttaccctg--ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttt 538  Q
    |||||||||||||||||||     |||||||||  |||||||||||||| |||||||||||||||||| ||  ||||||||||||  |||||||||||||    
T  29419946 tttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaacttt 29420045  T
Q  539 acc 541  Q
    |||    
T  29420046 acc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 8986293 - 8986208
Alignment:
Q  158 gggaggaagaaaccaaattgtgagtacttactcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagt 243  Q
    ||||| |||||||||||||||||| || | |||||||||||||||||||||||| | ||||| |||||||||| | |||| |||||    
T  8986293 gggagaaagaaaccaaattgtgagcacatgctcaccaaacaaccaaagtgtgagaaatcgactcaccaaacaagcaaattatgagt 8986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 506
Target Start/End: Original strand, 13245096 - 13245210
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaag 484  Q
    |||||||||| | | ||||| |||||||| |||| || |||| |||||||| ||||||||||| ||||| ||||||||| ||||||       |||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc-------acacaag 13245188  T
Q  485 aggctgtttccaggacttgaac 506  Q
    ||| ||||||||||||||||||    
T  13245189 aggttgtttccaggacttgaac 13245210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 507
Target Start/End: Complemental strand, 17471673 - 17471558
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctg---ttttacacaagaggctgt 491  Q
    ||||||||| | ||||||||||  ||||||| |||||||| || || ||||| ||| ||||||||||||||||| ||||   ||||||||||||||||||    
T  17471673 ggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggctgt 17471574  T
Q  492 ttccaggacttgaacc 507  Q
    |||   ||||||||||    
T  17471573 ttctgagacttgaacc 17471558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 502
Target Start/End: Original strand, 30864439 - 30864536
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccct-gttttacacaagaggctgtttccaggactt 502  Q
    |||| |||||||  |||||| |||||| |||||  |||||||||| |||||||||||  ||||||||  ||||||||||||||||||||||| |||||    
T  30864439 agcttccgcatacgcagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccctatttttacacaagaggctgtttccatgactt 30864536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 440 - 523
Target Start/End: Original strand, 2003592 - 2003678
Alignment:
Q  440 caccatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtca 523  Q
    ||||||||| |||||||||||||  |||||||||||||   || |||| |||||||||||||||||| |||||  ||||||||||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttcagtca 2003678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 477
Target Start/End: Complemental strand, 24890533 - 24890453
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    |||||||| |||||| |||||  ||||||| |||||||| |||||||| ||||||||||||| |||| |||||| ||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttt 24890453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 532
Target Start/End: Original strand, 31821355 - 31821491
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagaggctgtttcc 495  Q
    |||||| || |||||||||||| ||||| |  || ||||| ||||| ||||||||||||||||| ||  |||||||| ||||  |||   |||||||||     
T  31821355 ggtgcattaaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccctattttttacacacggctgtttct 31821454  T
Q  496 aggacttgaacccgcaacctttcagtcacatgacaac 532  Q
    | ||||||||| ||  ||||||||||||||| |||||    
T  31821455 acgacttgaactcgtgacctttcagtcacataacaac 31821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 38584002 - 38584066
Alignment:
Q  34 caatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaatcaaaagggggaga 98  Q
    |||||| | |||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||    
T  38584002 caatcagaagaatcaaaagggggagaagtgcaatgcaatcactcagaaaaatcaaaagggggaga 38584066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 1173471 - 1173620
Alignment:
Q  149 gaatcaaaagggag-gaagaaaccaaattgtgagtactt-actcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagtact 246  Q
    |||||||||||| | ||||||||||||||||||| |||  |||||||||||||||||||||||||| ||  || |||||||||||| |  |||||| |||    
T  1173471 gaatcaaaagggcgagaagaaaccaaattgtgagcactagactcaccaaacaaccaaagtgtgagcgct-tactcaccaaacaaacaacatgtgagcact 1173569  T
Q  247 atcttactcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaa 300  Q
    |    ||||||| |||||| ||| | |||| ||| |||  ||||||||||||||    
T  1173570 a---gactcaccaaacaaccaaaatatgagtactcgactcaccaaacaaacaaa 1173620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 34080237 - 34080176
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 444  Q
    |||||||||||| ||||||||| | ||||||||||| ||||||| |||||||| ||||||||    
T  34080237 aaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 38584195 - 38584247
Alignment:
Q  191 accaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgagt 243  Q
    |||||||||||||| |||||||||||||| |||||||||| | ||||||||||    
T  38584195 accaaacaaccaaaatgtgagcactcgactcaccaaacaagcaaattgtgagt 38584247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 40579750 - 40579810
Alignment:
Q  385 aagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 445  Q
    |||||||||| ||||||||| ||||||||||||  ||||||| |||||||| |||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 445
Target Start/End: Complemental strand, 41410000 - 41409936
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccat 445  Q
    |||| ||||||||| ||||||||  ||||||||||||| ||||||| |||||||| |||||||||    
T  41410000 aaaagagggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 477
Target Start/End: Original strand, 39499240 - 39499323
Alignment:
Q  394 ctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt 477  Q
    ||||||||||| ||||||||||||  |||| |  |  |||||||||||||||||| ||||||||||||||  ||||||| ||||    
T  39499240 ctggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttaccctatttt 39499323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 435
Target Start/End: Original strand, 39189501 - 39189555
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 435  Q
    |||||| ||||||| ||||||||||||||||||||||| | ||||| ||||||||    
T  39189501 aaaaaaaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 39189555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 4794924 - 4794871
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggt 450  Q
    |||||||||||||||||||||| |||| || |||||||| ||||| ||||||||    
T  4794924 gtgcactagagctcccgcatatgcaggatccgggaaggggtcccatcatttggt 4794871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 23488619 - 23488535
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca--tttggtgtattgtacgcagtc 465  Q
    ||||| |||||| ||||||||| ||||| ||||||  ||||||| |||||||| ||||||||  ||| |||||||| ||||||||    
T  23488619 aaaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattgcacgcagtc 23488535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 29409360 - 29409397
Alignment:
Q  57 agaagtgcaatgcaatcaatcagaagaatcaaaagggg 94  Q
    |||||||||||||||||||||||||||||||| |||||    
T  29409360 agaagtgcaatgcaatcaatcagaagaatcaacagggg 29409397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 31523353 - 31523296
Alignment:
Q  397 gtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtat 454  Q
    |||||||| ||||||||||||| |||||| |||||| || | ||||||||||||||||    
T  31523353 gtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatttggtgtat 31523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 38583953 - 38584027
Alignment:
Q  20 gggagaagtgtaatcaatcaaaggaatcaaatggggcagaagtgcaatgcaatcaatcagaagaatcaaaagggggaga 98  Q
    |||||||||| ||||||||| | |||||||| |||  |||| |||||||    ||||||||||||||||||||||||||    
T  38583953 gggagaagtgcaatcaatcagaagaatcaaaagggcgagaaatgcaatg----caatcagaagaatcaaaagggggaga 38584027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 38584136 - 38584201
Alignment:
Q  168 aaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaac 232  Q
    |||||||||||||| ||||| |||||||||| |||||| |||||||||| ||| |||||| |||||    
T  38584136 aaccaaattgtgagcacttaactcaccaaactaccaaattgtgagcacttgactcaccaaccaaac 38584201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 32290644 - 32290604
Alignment:
Q  187 actcaccaaacaaccaaagtgtgagcactcgacccaccaaa 227  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  32290644 actcaccaaacaaccaaattgtgagcacttgacccaccaaa 32290604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 34766394 - 34766330
Alignment:
Q  380 taaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca 444  Q
    |||||||||| |||| | ||||||| ||||||||||||  ||||||| |||||||| ||||||||    
T  34766394 taaaaaagggaaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 541
Target Start/End: Complemental strand, 35017849 - 35017793
Alignment:
Q  486 ggctgtttccaggacttgaacccgcaacctttca-gtcacatgacaacaactttacc 541  Q
    |||||||| |||||||| ||||||  |||||||| ||||||||||||||||||||||    
T  35017849 ggctgttttcaggacttaaacccgtgacctttcaagtcacatgacaacaactttacc 35017793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 38584256 - 38584344
Alignment:
Q  283 accaaccaaacaaacaaaccaa-ttgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaacgaaaccaaatcaaact 370  Q
    ||||| ||||| |||||||||| |||||||| |||   |||||||| ||||| |||||||||||||| ||||| ||||| ||| |||||    
T  38584256 accaaacaaacgaacaaaccaaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaactaaaccgaataaaact 38584344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 44449419 - 44449529
Alignment:
Q  420 cagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctgttttaca--caagaggctgtttccaggacttgaacccgcaacctt 516  Q
    ||||||| |||||||| |||||| |||| |||||||||||||||| |||| |||||||| ||  ||||||| |||||  |||| |||||| ||  |||||    
T  44449419 cagggtccgggaaggggtcccactattttggtgtattgtacgcagccttatcctgtttttcattcaagaggttgtttttagga-ttgaactcgtgacctt 44449517  T
Q  517 tcagtcacatga 528  Q
    ||||| ||||||    
T  44449518 tcagttacatga 44449529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 540
Target Start/End: Complemental strand, 4795891 - 4795730
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt-ggtgtattgtacgcagtcttaccctg---tttta 478  Q
    ||||||||||||   ||||||| |||| | ||||| ||| |||| |||||  | ||||||||||| ||||||||| ||||||||| | | ||   |||||    
T  4795891 aaaagggcaacccactgcactaaagcttcggcatacacaaggtccgggaaaaggtcccaccattttggtgtattgcacgcagtctaatcttgttttttta 4795792  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    | || |||||||||| || ||||| |||  |  || |||||||||| |||||||||||||||    
T  4795791 cgcatgaggctgttttcaagacttcaacaagtgacttttcagtcacgtgacaacaactttac 4795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 435
Target Start/End: Complemental strand, 8576030 - 8575979
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaaggg 435  Q
    ||||||||||||||||||||| ||||||| ||||  ||||||| ||||||||    
T  8576030 aaagggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggg 8575979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 8986182 - 8986123
Alignment:
Q  295 aacaaaccaattgtgagctctaccatgactcactcaacagccaaacaaattgaatcaaac 354  Q
    |||||||||||||||||| |||   |||||||| ||||| |||||||||||||| |||||    
T  8986182 aacaaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 8986123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 506
Target Start/End: Original strand, 12315712 - 12315775
Alignment:
Q  444 atttggtgtattgtacgcagtcttaccctg-ttttacacaagaggctgtttccaggacttgaac 506  Q
    |||||||||||||||| ||||||||||||| ||||  | |||| |||||||||| |||||||||    
T  12315712 atttggtgtattgtacacagtcttaccctgttttttaataagaagctgtttccatgacttgaac 12315775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 454
Target Start/End: Complemental strand, 31525838 - 31525771
Alignment:
Q  387 gggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtat 454  Q
    |||||| | ||| ||||| ||||||||||||| |||||||||| || || ||||| ||||||||||||    
T  31525838 gggcaatccggtacactaaagctcccgcatatgcagggtctggcaaagggtcccatcatttggtgtat 31525771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 38584085 - 38584180
Alignment:
Q  149 gaatcaaaagggag-gaagaaaccaaattgtgagtactta-ctcaccaaacaaccaaagtgtgagcactcgacccaccaaacaaaccaattgtgag 242  Q
    |||||||||||| | ||| ||| ||||||||||| | ||| ||||||||||||||||| ||||||||||  || |||||||| | | |||||||||    
T  38584085 gaatcaaaagggggagaaaaaatcaaattgtgagcatttaactcaccaaacaaccaaattgtgagcacttaactcaccaaactaccaaattgtgag 38584180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 8986555 - 8986474
Alignment:
Q  14 aaaggagggagaagtgtaat-caatcaaaggaatcaaatggggc-agaagtgcaatgcaatcaatcagaagaatcaaaaggg 93  Q
    ||||| |||||||||| ||| |||||| | |||||||| ||||  ||||||||||||||||||||| |||||| ||| ||||    
T  8986555 aaaggggggagaagtgcaatgcaatcagaagaatcaaaaggggggagaagtgcaatgcaatcaatcggaagaaccaataggg 8986474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 22371248 - 22371199
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaa 432  Q
    |||||||||||| ||||||||| ||||||||||||  ||||||| |||||    
T  22371248 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 540
Target Start/End: Original strand, 34752759 - 34752820
Alignment:
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||||| ||||||||| |||||||  ||  ||||||||||||||||| ||||| |||||    
T  34752759 cacaagaggttgtttccagaacttgaattcgtgacctttcagtcacatgataacaagtttac 34752820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 38583918 - 38583955
Alignment:
Q  57 agaagtgcaatgcaatcaatcagaagaatcaaaagggg 94  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  38583918 agaagtgcaatacaatcaatcagaagaatcaaaggggg 38583955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 1173233 - 1173269
Alignment:
Q  63 gcaatgcaatcaatcagaagaatcaaaagggggagag 99  Q
    |||||||||||||||||||||||||| || |||||||    
T  1173233 gcaatgcaatcaatcagaagaatcaacagagggagag 1173269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 32290598 - 32290558
Alignment:
Q  198 aaccaaagtgtgagcactcgacccaccaaacaaaccaattg 238  Q
    ||||||| |||||||||| |||||||||||||||| |||||    
T  32290598 aaccaaattgtgagcacttgacccaccaaacaaacaaattg 32290558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 32290644 - 32290584
Alignment:
Q  252 actcacccaacaactaaattgtgagcactagaccaaccaaacaaacaaaccaattgtgagc 312  Q
    ||||||| |||||| |||||||||||||| |||| |||||| ||| || | ||||||||||    
T  32290644 actcaccaaacaaccaaattgtgagcacttgacccaccaaaaaaataaccaaattgtgagc 32290584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 116; Significance: 9e-59; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 386 - 541
Target Start/End: Original strand, 10052 - 10207
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaaga 485  Q
    ||||||||| |||||||| ||||||| |||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaaga 10151  T
Q  486 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  10152 ggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 10207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 386 - 541
Target Start/End: Original strand, 20380 - 20535
Alignment:
Q  386 agggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaaga 485  Q
    ||||||||| |||||||| ||||||| |||||| ||||||| |||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaaga 20479  T
Q  486 ggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  20480 ggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 106; Significance: 8e-53; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 11264 - 11108
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaa 483  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||| |||| |||||  ||||||||||||    
T  11264 aaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgttttacacaa 11165  T
Q  484 gaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||    
T  11164 gaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttacc 11108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 382 - 541
Target Start/End: Original strand, 13022 - 13182
Alignment:
Q  382 aaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg-ttttaca 480  Q
    ||||||||||||| ||||||||| ||| ||||||||  |||||||||||||||| |||||||||| |||||||||||||||| |||||| || ||||||     
T  13022 aaaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgtttttacg 13121  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  13122 caagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttacc 13182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 383 - 508
Target Start/End: Original strand, 48633 - 48758
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacaca 482  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  48633 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 48732  T
Q  483 agaggctgtttccaggacttgaaccc 508  Q
    ||||||||||||||  ||||||||||    
T  48733 agaggctgtttccaccacttgaaccc 48758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 388 - 541
Target Start/End: Original strand, 1591 - 1744
Alignment:
Q  388 ggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttacacaagagg 487  Q
    ||||||||||||||||| ||||||||||||  | ||||| |||||||| ||||| |||||||||||||||| |||| |||| ||||||||||||||||||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgttttacacaagagg 1690  T
Q  488 ctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
     ||||| ||||||||||||||   ||||||||||||||||||||||||||||||    
T  1691 ttgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttacc 1744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 92; Significance: 2e-44; HSPs: 5)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 381 - 541
Target Start/End: Complemental strand, 46969 - 46807
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc--tgtttta 478  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||  |||||||  | |||||    
T  46969 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttttta 46870  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||| ||||||||| |||||||||||  |||||  |||||||||||||||||||||||    
T  46869 cacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttacc 46807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 381 - 541
Target Start/End: Original strand, 24769 - 24926
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--tttta 478  Q
    |||||||||||||| | ||||||| ||||||||||||  ||||||  |||||||| |||||||||||||||| |||||||||| |||||||||  |||||    
T  24769 aaaaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtttttta 24868  T
Q  479 cacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||     |||||||||||   ||||||||||||||||||||||||||||||    
T  24869 cacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaactttacc 24926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 383 - 504
Target Start/End: Complemental strand, 43794 - 43672
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaa-gggatcccaccatttggtgtattgtacgcagtcttaccctgttttacac 481  Q
    |||||||||||   |||||||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  43794 aaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacac 43695  T
Q  482 aagaggctgtttccaggacttga 504  Q
    |||| ||||||||||| ||||||    
T  43694 aagacgctgtttccagaacttga 43672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 379 - 472
Target Start/End: Original strand, 46702 - 46796
Alignment:
Q  379 ctaaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccacca-tttggtgtattgtacgcagtcttaccct 472  Q
    ||||||| ||||| |||| |||| || ||||||||||||  |||||||||||||||| |||||||| |||||| ||||||| |||  ||||||||    
T  46702 ctaaaaatgggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattttggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 540
Target Start/End: Original strand, 46995 - 47041
Alignment:
Q  494 ccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    ||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  46995 ccaggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

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Target: scaffold0049 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 384 - 541
Target Start/End: Complemental strand, 59114 - 58953
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccattt--ggtgtattgtacgcagtcttaccctgtttt--ac 479  Q
    ||||||||||| | ||||||| ||||||||||||  ||| |||||||||||| |||||||||||  ||||||||||||||||||||||||||||||  |     
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttat 59015  T
Q  480 acaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||    
T  59014 acaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttacc 58953  T

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Target: scaffold0311 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 383 - 541
Target Start/End: Complemental strand, 10946 - 10786
Alignment:
Q  383 aaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttaca 480  Q
    ||||| ||||||  |||||||| ||||||||||||  ||||||| |||||||| |||||||||||||||||||| |||||| | |||||||  |||||||    
T  10946 aaaagagcaacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttaca 10847  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    ||||||| ||||| |||  ||||||||||  ||||| ||||||||||||||||||||||||    
T  10846 caagaggttgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttacc 10786  T

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Target: scaffold0180 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 381 - 471
Target Start/End: Original strand, 24130 - 24220
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccc 471  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  24130 aaaaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0254 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 540
Target Start/End: Complemental strand, 4264 - 4134
Alignment:
Q  415 atatacagggtctgggaagggatcccaccattt---ggtgtattgtacgcagtcttaccctgt--tttacacaagaggctgtttccaggacttgaacccg 509  Q
    ||||| |||||| |||||||| |||||||| ||   |||||||||||||||  |||| |||||  ||||||||||||| |||||||||||||||||||||    
T  4264 atatatagggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccg 4165  T
Q  510 caacctttcagtcacatgacaacaactttac 540  Q
      ||||||||||||||| |||||||||||||    
T  4164 tgacctttcagtcacataacaacaactttac 4134  T

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Target: scaffold0005 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 437 - 541
Target Start/End: Original strand, 226458 - 226565
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaaca 533  Q
    |||||||||||| ||||||||| |||| |||||||||||||   | ||||||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  226458 tcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaaca 226557  T
Q  534 actttacc 541  Q
    ||||||||    
T  226558 actttacc 226565  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 507
Target Start/End: Original strand, 55924 - 56008
Alignment:
Q  425 tctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacc 507  Q
    |||||||||||||||||| ||||| ||||||||| ||| | |||  |||  |||||||||| || |||||| ||| |||||||||    
T  55924 tctgggaagggatcccactatttgatgtattgtatgcaattttattctgttttttacacaaaagactgtttacagaacttgaacc 56008  T

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Target: scaffold0036 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 437 - 531
Target Start/End: Original strand, 35070 - 35167
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgtttt---acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaa 531  Q
    ||||||||||||||||||||||||||| |||||||||||||   ||||||||| |||||| |||||||||||||||  ||||| ||||||||||||||    
T  35070 tcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgacaa 35167  T

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Target: scaffold0018 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 509
Target Start/End: Original strand, 72867 - 72995
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctg--ttttacac 481  Q
    ||||||||||||||||||||| ||||||||||||  |||| || |||||||| | | |||||||||||||||||| |||| |||||| ||  ||||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacac 72966  T
Q  482 aagaggc-tgtttccaggacttgaacccg 509  Q
    ||||| | |||||| ||||||||||||||    
T  72967 aagagacttgtttctaggacttgaacccg 72995  T

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Target: scaffold0167 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 526
Target Start/End: Complemental strand, 23712 - 23590
Alignment:
Q  406 agctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgtttt--acacaagaggctgtttccaggacttg 503  Q
    ||||||| ||||  || ||||||||||||| |||||||||||| |  ||||||||||| || ||||||||||  |||||||||| ||||| || ||||||    
T  23712 agctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttg 23613  T
Q  504 aacccgcaacctttcagtcacat 526  Q
    |||||| | ||||||||||||||    
T  23612 aacccgtaccctttcagtcacat 23590  T

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Target: scaffold0194 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 539
Target Start/End: Complemental strand, 24786 - 24642
Alignment:
Q  381 aaaaaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgttttaca 480  Q
    |||||||||||| | ||||||||  |||||||| |||  |||||||||| |||||   |||| |||||||||||| |||||||||||||||             
T  24786 aaaaaagggcaatcaggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgcagtcttaccc--------- 24696  T
Q  481 caagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaacttta 539  Q
         ||||||||||||||||||||||||  ||||| ||||||| ||||||||||||||    
T  24695 -----ggctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaacttta 24642  T

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Target: scaffold0031 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 541
Target Start/End: Complemental strand, 43209 - 43105
Alignment:
Q  437 tcccaccatttggtgtattgtacgcagtcttaccctgtttt-acacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaac 535  Q
    |||||||||||| |||||||||    ||||||| ||||||| ||||||||||||||||| ||||| ||||| ||  |||||||| ||||||||||| |||    
T  43209 tcccaccatttgatgtattgtaaat-gtcttactctgtttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataac 43111  T
Q  536 tttacc 541  Q
    ||||||    
T  43110 tttacc 43105  T

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Target: scaffold0954 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 501
Target Start/End: Complemental strand, 3667 - 3560
Alignment:
Q  396 ggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt--tttacacaagaggctgttt 493  Q
    ||||||||| |||| |||||||  ||||||  |||||||| ||||| |||| |||||||| ||||||| |||||| | |  ||||||||||||||| |||    
T  3667 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctcttt 3568  T
Q  494 ccaggact 501  Q
    ||||||||    
T  3567 ccaggact 3560  T

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Target: scaffold0116 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 474 - 541
Target Start/End: Complemental strand, 8934 - 8867
Alignment:
Q  474 ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||| | ||||||||||| ||||||| |  ||||| ||||||||||||||||||||||||    
T  8934 ttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttacc 8867  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 540
Target Start/End: Complemental strand, 83903 - 83852
Alignment:
Q  489 tgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttac 540  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttac 83852  T

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Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 58630 - 58699
Alignment:
Q  384 aaagggcaacctggtgcactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtat 454  Q
    |||||||| |||||||||| |||||||||||||| |||||||| | |||||| || ||||||| |||||||    
T  58630 aaagggcagcctggtgcac-agagctcccgcatacacagggtccgagaaggggtctcaccattcggtgtat 58699  T

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Target: scaffold0867 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 3685 - 3793
Alignment:
Q  400 cactagagctcccgcatatacagggtctgggaagggatcccaccatttggtgtattgtacgcagtcttaccctgt-tttacacaagaggctgtttccagg 498  Q
    ||||| |||||||||||||||| | ||  | || || ||||||||||||||||||||||||||   ||||| ||| |||||||||| || ||||| |||     
T  3685 cactaaagctcccgcatatacaagatcgagaaaagggtcccaccatttggtgtattgtacgcaacgttaccttgtatttacacaag-ggttgttttcaga 3783  T
Q  499 acttgaaccc 508  Q
    ||||||||||    
T  3784 acttgaaccc 3793  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 33005 - 32906
Alignment:
Q  444 atttggtgtattgtacgcagtcttaccctg--ttttacacaagaggctgtttccaggacttgaacccgcaacctttcagtcacatgacaacaactttacc 541  Q
    |||||||||||||||  ||||||||| |||  ||||||| |||||| | ||||  ||||||||||||   |||||| |||||| || |||||||| ||||    
T  33005 atttggtgtattgtatacagtcttactctgttttttacagaagaggttttttcgcggacttgaacccatgacctttaagtcacgtggcaacaactatacc 32906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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