View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19583_low_26 (Length: 358)
Name: NF19583_low_26
Description: NF19583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19583_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 17 - 342
Target Start/End: Complemental strand, 45793219 - 45792894
Alignment:
| Q |
17 |
tagatcaatgaaattcaaagcattaagcatatgatgaaaagatggcatagttttcacttgtacaaactattcatattaaaggtttattaggtcacttcgc |
116 |
Q |
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| T |
45793219 |
tagatcaatgaaattcaaagcattaagcatatgatgaaaagatggcatagttttcacttgtacaaactattcatattaaaggtttattaggtcacttcgc |
45793120 |
T |
|
| Q |
117 |
agtctattattctttgaaaatacatggaactacttttaatatttgtgttataccataaatcaagtgagctggtcatgtttcatttttatcaacagaccct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45793119 |
agtctattattctttgaaaatacatggaactacttttaatatttgtgttataccataaatcaagtgagctggtcatgtttcatttttatcaacagaccct |
45793020 |
T |
|
| Q |
217 |
gattttatgttgcttgtcactgccaagtgccaagactatttttctctcttcagtatgttactgttcttcagacaacctttgaatcaaataaaccttccac |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
45793019 |
gattttatgttgcttgtcactgccaagtgccaagactatttttttctcttcagtatgttactgttcttcagacaacctttgaatcaaataaaacttccac |
45792920 |
T |
|
| Q |
317 |
catacacatgcatgaaccaaaaggat |
342 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
45792919 |
catacacatgcatgaaccaaaaggat |
45792894 |
T |
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