View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19583_low_46 (Length: 282)
Name: NF19583_low_46
Description: NF19583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19583_low_46 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 36878293 - 36878541
Alignment:
| Q |
19 |
aaatggaagggattgaaggagaacgaagcagctacaaactccaaccctcacgaatcaacaacgaagatatactcttctgcatcgacattgatccacaatc |
118 |
Q |
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| T |
36878293 |
aaatggaagggattgaaggagaacgaagcagctacaaactccaaccctcacgaatcaataacgaagatatactcttctgcatcgacattgatccacaatc |
36878392 |
T |
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| Q |
119 |
catggcggagttgaaaggtgctaccagtggtagacccaatggaagacccttcactcgtttagatgcaattaaacaagccattgttcttttcgtcaatgct |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36878393 |
catggcggagttgaaaggtgctaccagtggtagacccaatggaagacccttcactcgtttagatgcaattaaacaagccattgttcttttcgtcaatgct |
36878492 |
T |
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| Q |
219 |
aaactcaccatcaatcctcaacatcgttttgctttcgctactctctctg |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36878493 |
aaactcaccatcaatcctcaacatcgttttgctttcgctactctctctg |
36878541 |
T |
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