View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19585_high_12 (Length: 332)
Name: NF19585_high_12
Description: NF19585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19585_high_12 |
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Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 33 - 319
Target Start/End: Original strand, 34881013 - 34881300
Alignment:
| Q |
33 |
ggagcataagatgtacaagaccaataatagatgaacatgattgaatatctaagcaagtgacaattttgtaggaaagtgcttcatgaaaattttctttcaa |
132 |
Q |
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| T |
34881013 |
ggagcataagatgtacaagaccaataatagatgaacatgattgaatatctaagcaagtgacaattttgtaggaaagtgcttcatgaaaattttctttcaa |
34881112 |
T |
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| Q |
133 |
ttattagattttacagaaatgatagctgacaagattgtcacctcattatggccaatccacctggcttgagtatcctactcatctccttgaaaatatcaag |
232 |
Q |
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| T |
34881113 |
ttattagattttacagaaatgatagctgacaagattgtcacctcattatggccaatccacctggcttgagtatcctattcatctccttgaaaatatcaag |
34881212 |
T |
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| Q |
233 |
aggctttgttaggtagtcaacactgacctgcaagacatattgagttttcaacctttgaatgactggctttagtat-cctattcatctc |
319 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
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| T |
34881213 |
aggctttgttaggtagtcaacactgacctgcaagacatattgagttttcaacctttgaatgactggcttcagtatccctattcatctc |
34881300 |
T |
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