View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19585_high_13 (Length: 298)
Name: NF19585_high_13
Description: NF19585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19585_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 7 - 290
Target Start/End: Complemental strand, 8153866 - 8153583
Alignment:
| Q |
7 |
actagtcttccgagacaaatcccacattaaagttgccaccaaaatcaaagccaccaacgttgtagacacagtcacaacaaacacaccactaaatcttcgt |
106 |
Q |
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| T |
8153866 |
actaatcttccgagacaaatcccacattaaagttgccaccaaaatcaaagccaccaacgttgtagacacagtcacaacaaacacaccactaaatcttcgt |
8153767 |
T |
|
| Q |
107 |
ccatataaaacttcataagccttaacaaatgatgtaactgccacatagattattgtaagattactcgctactacatcacaaacacccatatatattgata |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
8153766 |
ccatataaaacttcataagccttaacaaatgatgtaactgccacatagattattgtaaggttactcgctactacatcacaaacacccatatatattgata |
8153667 |
T |
|
| Q |
207 |
ttgaacnnnnnnnnnnnggaacaagtaacttgaaatagagaagaaaaacactctatctagatgtggatttattggatctgtgtt |
290 |
Q |
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|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
8153666 |
ttgaacaaaaaaaaaaaggaacaggtaacttgaaatagagaagaaaaacactctatctagatgtggatttattggatttgtgtt |
8153583 |
T |
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