View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19586_low_10 (Length: 401)

Name: NF19586_low_10
Description: NF19586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19586_low_10
NF19586_low_10
[»] chr7 (1 HSPs)
chr7 (174-392)||(14710572-14710790)
[»] chr2 (3 HSPs)
chr2 (173-392)||(1925040-1925259)
chr2 (174-383)||(25815198-25815407)
chr2 (174-392)||(19704714-19704929)
[»] chr5 (2 HSPs)
chr5 (174-392)||(22370669-22370888)
chr5 (173-392)||(19304541-19304760)
[»] chr6 (4 HSPs)
chr6 (194-392)||(16811101-16811299)
chr6 (21-165)||(9866214-9866358)
chr6 (21-165)||(9874318-9874462)
chr6 (86-132)||(9851502-9851548)
[»] chr3 (1 HSPs)
chr3 (174-392)||(29899685-29899903)
[»] chr1 (6 HSPs)
chr1 (174-392)||(14715033-14715251)
chr1 (176-392)||(16765094-16765310)
chr1 (227-377)||(22002125-22002275)
chr1 (227-377)||(22008396-22008546)
chr1 (233-392)||(13246252-13246411)
chr1 (175-212)||(18491417-18491454)
[»] scaffold0021 (1 HSPs)
scaffold0021 (174-392)||(156-374)
[»] chr8 (3 HSPs)
chr8 (174-392)||(19463376-19463593)
chr8 (174-392)||(19561055-19561272)
chr8 (174-212)||(18394730-18394768)
[»] scaffold0285 (1 HSPs)
scaffold0285 (173-392)||(8951-9170)
[»] chr4 (1 HSPs)
chr4 (173-212)||(17735975-17736014)
[»] scaffold0047 (1 HSPs)
scaffold0047 (176-212)||(57679-57715)


Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 174 - 392
Target Start/End: Original strand, 14710572 - 14710790
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  14710572 cactacaacattttggccctacgacaacgcctaaattttggaaggtaaaaaaaccgttttggtagagtcccatgaacaacgattttctgattctgttgta 14710671  T
Q  274 atagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgta 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14710672 atagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgagaacggatttttgtttgttattttcgtcaacacgta 14710771  T
Q  374 ttaaccgttccagtataat 392  Q
    |||||||||| ||||||||    
T  14710772 ttaaccgttctagtataat 14710790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 7e-99; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 173 - 392
Target Start/End: Complemental strand, 1925259 - 1925040
Alignment:
Q  173 tcactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgt 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||    
T  1925259 tcactacaacattttggccctacgacaacgcctaaattttggaaggtaaaaaaaccgttttggtagagtcccatgaacaacgattttctgattctgttgt 1925160  T
Q  273 aatagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgt 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  1925159 aatagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgagaacagatttttgtttgttattttcgtcaacacgt 1925060  T
Q  373 attaaccgttccagtataat 392  Q
    ||||||||||| ||||||||    
T  1925059 attaaccgttctagtataat 1925040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 174 - 383
Target Start/End: Complemental strand, 25815407 - 25815198
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         || ||  |||||||||||| ||||||||||||||||| ||||||     
T  25815407 cactacaacattttggccctacgacaacgcctaaattttggaaggtaaaaaaattgttttcatagagtcccatggacaacgattttctgattttgttgtg 25815308  T
Q  274 atagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgta 373  Q
     |||| |||  ||||||||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||    
T  25815307 gtaggatatgctattttttcaatttatttgtaacaactcaaaagtgttgtggtataagaaacgagaacggatttttatttgttatttttgtcaacatgta 25815208  T
Q  374 ttaaccgttc 383  Q
    ||||| ||||    
T  25815207 ttaactgttc 25815198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 174 - 392
Target Start/End: Original strand, 19704714 - 19704929
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    |||||||||||||||| ||    |||||||||||||||||||||||       ||||  || |||||||||||| ||||||||||||||||| |||||||    
T  19704714 cactacaacattttggtcc----acaacgcctaaattttggaaggtaaaaaaaccgttctgatagagtcccatggacaacgattttctgattttgttgta 19704809  T
Q  274 atagggtataatattttttcaatttattc-gtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgt 372  Q
     ||  |||| ||||||||| | ||| ||  ||||| |||| |||||||||||||||||||||| | ||||||||||| |||||||||| |||||||| ||    
T  19704810 gtaatgtatgatattttttaatttttttttgtaacgactcaaaagcgttgtggtataagaaacaagaacggatttttatttgttatttccgtcaacatgt 19704909  T
Q  373 attaaccgttccagtataat 392  Q
    |||||| ||||  |||||||    
T  19704910 attaactgttctggtataat 19704929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 6e-87; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 174 - 392
Target Start/End: Original strand, 22370669 - 22370888
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||       |||| |||||||||||||||||||||||||||||||||| |||||||    
T  22370669 cactacaacattttgaccctacgacaacgcctaaattttgaaaggtaaaaaaaccgttttggtagagtcccatgaacaacgattttctgattatgttgta 22370768  T
Q  274 atagggtataatatttt-ttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgt 372  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22370769 atagggtataatatttttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgagaacggatttttgtttgttattttcgtcaacacgt 22370868  T
Q  373 attaaccgttccagtataat 392  Q
    ||||||| ||| ||||||||    
T  22370869 attaaccattctagtataat 22370888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 173 - 392
Target Start/End: Original strand, 19304541 - 19304760
Alignment:
Q  173 tcactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgt 272  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||         ||  ||||||||| ||||| ||||||||||||| |||||||| |    
T  19304541 tcactacaatattttggccctacaacaacgcctaaattttggaaggtaaaaaaattgttctggtagagtaccatggacaacgattttctaattctgtttt 19304640  T
Q  273 aatagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgt 372  Q
    |||||  ||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||| |     
T  19304641 aatagcatatgatattttttcaatttatttgtaacaactcaaaagcgttgtggtataagaaacgagaacagatttttatttgttatttttgtcaacatgc 19304740  T
Q  373 attaaccgttccagtataat 392  Q
    |||||| ||||  |||||||    
T  19304741 attaactgttctggtataat 19304760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 8e-77; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 194 - 392
Target Start/End: Complemental strand, 16811299 - 16811101
Alignment:
Q  194 acgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgtaatagggtataatattttttc 293  Q
    |||| |||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  16811299 acgataacgcctaaattttggaaggtaaaaaaaccgtcttggtagagtcccatggacaacgattttctgattatgttgtaataggatataatattttttc 16811200  T
Q  294 aatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgtattaaccgttccagtataat 392  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  16811199 aatttattcgtaacaactcgaaagcgttgtggtataagaaacgagaacggatttttgtttgttatattcgtcaatacgtattaaccgttctagtataat 16811101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 9866358 - 9866214
Alignment:
Q  21 ctacaattgtattgattatatgtttacaattgcaaaactggtacgtcccatgattgagattatgatatgaacccctcatcatatataaaatgaagcaaca 120  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9866358 ctacaattgtattgattatatgtttacaattgcaaaacaggtacgtcccatgattgagattatgatatgaacccctcatcatatatgaaatgaagcaaca 9866259  T
Q  121 gttaatctaataaagattaatatctccattttttattgtatacta 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9866258 gttaatctaataaagattaatatctccattttttattgtatacta 9866214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 9874318 - 9874462
Alignment:
Q  21 ctacaattgtattgattatatgtttacaattgcaaaactggtacgtcccatgattgagattatgatatgaacccctcatcatatataaaatgaagcaaca 120  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9874318 ctacaattgtattgattatatgtttacaattgcaaaacaggtacgtcccatgattgagattatgatatgaacccctcatcatatatgaaatgaagcaaca 9874417  T
Q  121 gttaatctaataaagattaatatctccattttttattgtatacta 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9874418 gttaatctaataaagattaatatctccattttttattgtatacta 9874462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 9851502 - 9851548
Alignment:
Q  86 tatgaacccctcatcatatataaaatgaagcaacagttaatctaata 132  Q
    ||||||| ||||||||||||| ||||||||||||| | |||||||||    
T  9851502 tatgaactcctcatcatatatgaaatgaagcaacaatcaatctaata 9851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 174 - 392
Target Start/End: Original strand, 29899685 - 29899903
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||       ||||| ||||||||||| ||| ||||||||||||| ||| |||||||    
T  29899685 cactacaacattttggccctacgacaacgcctaaattttggaaagtaaaaaaaccgtcctggtagagtccgatgcacaacgattttctaattttgttgta 29899784  T
Q  274 atagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgta 373  Q
     |||||||  ||||||||| ||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||| |||    
T  29899785 ttagggtaggatattttttaaatttttttataacaactcgaaagcgttgtggtataagaaacgagaacggatttttatttattactttcgtcaacatgta 29899884  T
Q  374 ttaaccgttccagtataat 392  Q
    ||||| ||||  |||||||    
T  29899885 ttaactgttctggtataat 29899903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 174 - 392
Target Start/End: Complemental strand, 14715251 - 14715033
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||       ||||| ||||||||||| ||| ||||||||||||| ||| |||||||    
T  14715251 cactacaacattttggccctacgacaacgcctaaattttggaaagtaaaaaaaccgtcctggtagagtccgatgcacaacgattttctaattttgttgta 14715152  T
Q  274 atagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgta 373  Q
     |||||||  ||||||||| ||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||| |||    
T  14715151 ttagggtaggatattttttaaatttttttataacaactcgaaagcgttgtggtataagaaacgagaacggatttttatttattactttcgtcaacatgta 14715052  T
Q  374 ttaaccgttccagtataat 392  Q
    ||||| ||||  |||||||    
T  14715051 ttaactgttctggtataat 14715033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 176 - 392
Target Start/End: Complemental strand, 16765310 - 16765094
Alignment:
Q  176 ctacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgtaat 275  Q
    ||||||||||||||| ||||||||||||||||||||||||||||         ||  ||||||||||||||| |||||||||||||||||||||| || |    
T  16765310 ctacaacattttggctctacgacaacgcctaaattttggaaggtaaaaaaattgttctggtagagtcccatggacaacgattttctgattctgttttagt 16765211  T
Q  276 agggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgtatt 375  Q
    || |||| ||||||||| |||||||| |||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||| |||||    
T  16765210 agcgtatgatattttttaaatttatttgtaacaactgaaaagcgttgtggtataagaaacgagaacggatttttatttgttatttttatcaacatgtatt 16765111  T
Q  376 aaccgttccagtataat 392  Q
    ||||||||  |||||||    
T  16765110 aaccgttctggtataat 16765094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 227 - 377
Target Start/End: Original strand, 22002125 - 22002275
Alignment:
Q  227 ccgtcttggtagagtcccatgaacaacgattttctgattctgttgtaatagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggt 326  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||||||| ||||| || ||||| |||| ||||||||||| |    
T  22002125 ccgtcctggtagagtcccatggacaacgattttctgattttgttgtagtagggtatgatattttttaaatttttttgtaacgactcaaaagcgttgtgat 22002224  T
Q  327 ataagaaacgaaaacggatttttgtttgttattttcgtcaacacgtattaa 377  Q
    ||||||||| | ||||||||||| ||||||||||||||||||| |||||||    
T  22002225 ataagaaacaagaacggatttttatttgttattttcgtcaacatgtattaa 22002275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 227 - 377
Target Start/End: Original strand, 22008396 - 22008546
Alignment:
Q  227 ccgtcttggtagagtcccatgaacaacgattttctgattctgttgtaatagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggt 326  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||||||| ||||| || ||||| |||| ||||||||||| |    
T  22008396 ccgtcctggtagagtcccatggacaacgattttctgattttgttgtagtagggtatgatattttttaaatttttttgtaacgactcaaaagcgttgtgat 22008495  T
Q  327 ataagaaacgaaaacggatttttgtttgttattttcgtcaacacgtattaa 377  Q
    ||||||||| | ||||||||||| ||||||||||||||||||| |||||||    
T  22008496 ataagaaacaagaacggatttttatttgttattttcgtcaacatgtattaa 22008546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 233 - 392
Target Start/End: Original strand, 13246252 - 13246411
Alignment:
Q  233 tggtagagtcccatgaacaacgattttctgattctgttgtaatagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataaga 332  Q
    ||||||||| ||||| |||||||||||||||||||| |||| || ||||| |||||||||||||||||| |||||||||| ||||| |||| || |||||    
T  13246252 tggtagagttccatggacaacgattttctgattctgctgtagtaaggtatgatattttttcaatttatttgtaacaactcaaaagcattgtagtttaaga 13246351  T
Q  333 aacgaaaacggatttttgtttgttattttcgtcaacacgtattaaccgttccagtataat 392  Q
    |||  ||| | |||||| ||||||||||| |||| || |||||||| ||||  |||||||    
T  13246352 aacataaatgaatttttatttgttatttttgtcagcatgtattaactgttctggtataat 13246411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 18491454 - 18491417
Alignment:
Q  175 actacaacattttggccctacgacaacgcctaaatttt 212  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  18491454 actacaacattttgggcctacgacaacgcctaattttt 18491417  T

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Target: scaffold0021 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 174 - 392
Target Start/End: Complemental strand, 374 - 156
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         ||  ||||||||| ||||| ||||||||||||| |||||||| ||    
T  374 cactacaacattttggccctacgacaacgcctaaattttggaaggtaaaaatattgttctggtagagtaccatggacaacgattttctaattctgtttta 275  T
Q  274 atagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgta 373  Q
    ||||  ||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||| ||||||||||| ||||||| | |    
T  274 atagcatatgatattttttcaatttatttgtaacaactcaaaagcgttgtggtataagaaacgagaatggatttttatttgttatttttgtcaacatgca 175  T
Q  374 ttaaccgttccagtataat 392  Q
    ||||| ||||  |||||||    
T  174 ttaactgttctggtataat 156  T

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Target: chr8 (Bit Score: 110; Significance: 3e-55; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 174 - 392
Target Start/End: Original strand, 19463376 - 19463593
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||       || || ||||||||||||||| ||||||||||||||||| |||||||    
T  19463376 cactacaacattttggctctacgacaacgcctaaatttcggaaggtaaaaaaaccctcctggtagagtcccatggacaacgattttctgattttgttgta 19463475  T
Q  274 atagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgta 373  Q
     |||||||| ||||||||||||||| ||  |||| |||| ||||||||||| |||||||||| | ||||||||||| ||||||||||||| ||||| |||    
T  19463476 gtagggtatgatattttttcaattt-tttataacgactcaaaagcgttgtgatataagaaacaagaacggatttttatttgttattttcggcaacatgta 19463574  T
Q  374 ttaaccgttccagtataat 392  Q
    ||||| |||| ||||||||    
T  19463575 ttaactgttctagtataat 19463593  T

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Target: chr8; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 174 - 392
Target Start/End: Original strand, 19561055 - 19561272
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgta 273  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||       || || ||||||||||||||| ||||||||||||||||| |||||||    
T  19561055 cactacaacattttggctctacgacaacgcctaaatttcggaaggtaaaaaaaccctcctggtagagtcccatggacaacgattttctgattttgttgta 19561154  T
Q  274 atagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgta 373  Q
     |||||||| ||||||||||||||| ||  |||| |||| ||||||||||| |||||||||| | ||||||||||| ||||||||||||| ||||| |||    
T  19561155 gtagggtatgatattttttcaattt-tttataacgactcaaaagcgttgtgatataagaaacaagaacggatttttatttgttattttcggcaacatgta 19561253  T
Q  374 ttaaccgttccagtataat 392  Q
    ||||| |||| ||||||||    
T  19561254 ttaactgttctagtataat 19561272  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 18394730 - 18394768
Alignment:
Q  174 cactacaacattttggccctacgacaacgcctaaatttt 212  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  18394730 cactacaacattttagccctacgacaacgcctaattttt 18394768  T

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Target: scaffold0285 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 173 - 392
Target Start/End: Complemental strand, 9170 - 8951
Alignment:
Q  173 tcactacaacattttggccctacgacaacgcctaaattttggaaggtnnnnnnnccgtcttggtagagtcccatgaacaacgattttctgattctgttgt 272  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||         ||  ||||||||||||||| || ||||||||||||||||||| |    
T  9170 tcactacaacattttggctctacgacaacgcctaaattttggaaggtaaaaaaattgttctggtagagtcccatggactacgattttctgattctgtttt 9071  T
Q  273 aatagggtataatattttttcaatttattcgtaacaactcgaaagcgttgtggtataagaaacgaaaacggatttttgtttgttattttcgtcaacacgt 372  Q
    | ||| |||| ||||||||| |||||||| |||||||||  |||||||||||||||||||||| | ||||||||||| |||||||||||  |||||| ||    
T  9070 agtagcgtatgatattttttaaatttatttgtaacaactaaaaagcgttgtggtataagaaacaagaacggatttttatttgttatttttttcaacatgt 8971  T
Q  373 attaaccgttccagtataat 392  Q
    |||||||||||  |||||||    
T  8970 attaaccgttctggtataat 8951  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 17736014 - 17735975
Alignment:
Q  173 tcactacaacattttggccctacgacaacgcctaaatttt 212  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  17736014 tcactacaacattttggccctacgacaacgtctaattttt 17735975  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 57715 - 57679
Alignment:
Q  176 ctacaacattttggccctacgacaacgcctaaatttt 212  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  57715 ctacaacattttggctctacgacaacgcctaattttt 57679  T

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