View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19586_low_22 (Length: 218)
Name: NF19586_low_22
Description: NF19586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19586_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 1786493 - 1786312
Alignment:
| Q |
17 |
gaaaagagtaaacaaaatttcaaactctcatgccacaataagtacttnnnnnnnnttaattaccaaatagccattctgaaagacttccatttggacatag |
116 |
Q |
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| T |
1786493 |
gaaaagagtaaacaaaatttcaaactctcatgccacaataagtacttaaaaaaaattaattaccaaatagccattctgaaagacttccatttggacatag |
1786394 |
T |
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| Q |
117 |
ttcatagataagaagacattcatctccatcaacacaacagccaagcaaagaaacaagattttggtgcttgacatgagataga |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1786393 |
ttcatagataagaagacattcatctccatcaacacaacagccaagcaaagaaacaagattttggtgcttgacatgagataga |
1786312 |
T |
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