View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19587_low_24 (Length: 269)
Name: NF19587_low_24
Description: NF19587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19587_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 12268918 - 12268677
Alignment:
| Q |
1 |
actacgagaaaaagacaataaccttaagaggtgcccacgacttccaaacactagacatgagtttgatctcccctatcgattgaccctccccattatcggc |
100 |
Q |
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| T |
12268918 |
actacgagaaaaagacaataaccttaagaggtgcccatgacttccaaacactagacatgagtttgatctcccctgtcgattaaccctccccattatcggc |
12268819 |
T |
|
| Q |
101 |
tagtcacaaaagggtcaactaagttgatttcacggagtacataccatttaggtcatgtttccagaaccaatgatcatgagcaacgagctcaacaattcat |
200 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
12268818 |
tagtcacaaaagggtcaattaagttgatttcacggagtacataccatttaggtcatgtttccacaaccaatgatcatgagcaacgagctcaacaattcat |
12268719 |
T |
|
| Q |
201 |
gc-ccccagacaaacaaccccctcctccacatagcattccaa |
241 |
Q |
| |
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|| ||||||||||||||||||||||||||||||||||||||| |
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| T |
12268718 |
gccccccagacaaacaaccccctcctccacatagcattccaa |
12268677 |
T |
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