View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19589_high_41 (Length: 323)
Name: NF19589_high_41
Description: NF19589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19589_high_41 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 7 - 310
Target Start/End: Original strand, 17594848 - 17595152
Alignment:
| Q |
7 |
gagatgaacttagactcagtactaagagcaagaaaaaag-catcaagcattgcaattgttggaacaattattccaatattatttggacttggaacatatt |
105 |
Q |
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| T |
17594848 |
gagatgaacttagactcagtactaagagcaagaaaaaaggcatcaagcattgcaattgttggaacaattattccaatattatttggacttggaacatatt |
17594947 |
T |
|
| Q |
106 |
ttttggttgggaaaaccaaaggatatgatgataattcatatatgaaccgtaatggttatttattatggtcattaattgttactatcacaagttttccagt |
205 |
Q |
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| T |
17594948 |
ttttggttgggaaaaccaaaggatatgatgagaattcatatatgaaccgtaatgcttatttattatggtcattagttgttactatcacaagttttccagt |
17595047 |
T |
|
| Q |
206 |
ggtggcccacattctttcagatcttaagattctttatactggacttggtaaagtggcattaacagcagctacaatgaacgactttatcaattgggcaatg |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17595048 |
ggtggcccacattctttcagatcttaagattctttatactggacttggaaaagtggcattaacagcagctacaatgaacgactttatcaattgggcaatg |
17595147 |
T |
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| Q |
306 |
tttat |
310 |
Q |
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||||| |
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| T |
17595148 |
tttat |
17595152 |
T |
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