View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19589_high_57 (Length: 245)
Name: NF19589_high_57
Description: NF19589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19589_high_57 |
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Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 34843414 - 34843185
Alignment:
| Q |
1 |
tgaaaagatagattacatcactaaattatcaagtagctggatgaaatttttactaaaaatgtccaatgtacaagcactttgttactcaataaataattcc |
100 |
Q |
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| T |
34843414 |
tgaaaagatagattacatcactaaattatcaagtagctggatgaaatttttactaaaaatgtccaatgtacaagcactttgttactcaataaataattcc |
34843315 |
T |
|
| Q |
101 |
actccaataaatttgcaacatttgcatcctataacttgtctcaatccaaaggttctactttggtggatgccaaagatcttgatagctatgtcacaccann |
200 |
Q |
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| T |
34843314 |
actccaataaatttgcaacatttgcatcctataacttgtctcaatccaaaggttctactttggtggatgccaaagatcttgatagctatgtcacaccatt |
34843215 |
T |
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| Q |
201 |
nnnnnaatccttgatggccttttaattttg |
230 |
Q |
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| T |
34843214 |
tttttaatccttgatggccttttaattttg |
34843185 |
T |
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