View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19589_high_63 (Length: 238)
Name: NF19589_high_63
Description: NF19589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19589_high_63 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 44150655 - 44150421
Alignment:
| Q |
1 |
ttacttcctttgttaaaagtctagctagctagctctggccccgtgttgtgaaagaaaaactcttcattaattcttgttgtgaaagggcacaacttgtttt |
100 |
Q |
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| T |
44150655 |
ttacttccatcgttaaaagtctagctagctagctatggccccgtgttgtgaaagaaaaactcttcattaattcttgttgttaaagggcacaacttgtttt |
44150556 |
T |
|
| Q |
101 |
ccacacacgtttcaaaatttattttgtattcatatatagaataataatagaatatcattaactaaattggtttgtcaatgcatgtgaaaggtcgatctat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
44150555 |
ccacacacgtttcaaaatttattttgtattcatatatagaataataatagaatatcattaactaaattgttttgtcaatgcatgtgaaaggtcgatctat |
44150456 |
T |
|
| Q |
201 |
attttctcattctccttagtaaaataaaacttcat |
235 |
Q |
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|||||||| |||||||||||||||||||||||||| |
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| T |
44150455 |
attttctctttctccttagtaaaataaaacttcat |
44150421 |
T |
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