View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19589_high_65 (Length: 234)
Name: NF19589_high_65
Description: NF19589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19589_high_65 |
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Alignment Details
Target: chr8 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 1234309 - 1234434
Alignment:
| Q |
10 |
aagaatatctagttggaagcctatccagcaacaaatgcgaaaatggagttaaaatatgttttgagactcattaaattactaagttttggttttaggcttc |
109 |
Q |
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| T |
1234309 |
aagaatatctagttggaagcctatccagcaacaaatgccaatacatagtt-aaatatg--ttgagactcattaaattactaagttttgtttttaggcttc |
1234405 |
T |
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| Q |
110 |
attaaaataatcacacggcatttcttgtc |
138 |
Q |
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| T |
1234406 |
attaaaaaaatcacacggcatttcttgtc |
1234434 |
T |
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