View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19589_low_30 (Length: 423)

Name: NF19589_low_30
Description: NF19589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19589_low_30
NF19589_low_30
[»] chr6 (10 HSPs)
chr6 (1-409)||(31564316-31564734)
chr6 (150-314)||(33416366-33416536)
chr6 (7-113)||(33385564-33385670)
chr6 (271-400)||(33385707-33385837)
chr6 (15-113)||(33259861-33259959)
chr6 (7-90)||(24631864-24631947)
chr6 (326-385)||(33281320-33281376)
chr6 (343-397)||(33416538-33416592)
chr6 (326-385)||(33301947-33302003)
chr6 (7-82)||(281808-281881)
[»] chr5 (2 HSPs)
chr5 (151-305)||(30653203-30653360)
chr5 (32-83)||(11457158-11457209)
[»] scaffold0428 (2 HSPs)
scaffold0428 (15-113)||(3949-4047)
scaffold0428 (326-385)||(12876-12932)
[»] chr2 (4 HSPs)
chr2 (268-397)||(17443374-17443503)
chr2 (48-113)||(17443537-17443602)
chr2 (8-85)||(14299588-14299663)
chr2 (67-119)||(43199930-43199982)
[»] chr8 (2 HSPs)
chr8 (7-85)||(13000381-13000457)
chr8 (7-85)||(30191098-30191174)
[»] chr3 (3 HSPs)
chr3 (7-83)||(43115093-43115167)
chr3 (7-85)||(37273171-37273247)
chr3 (10-106)||(24624250-24624344)
[»] chr7 (2 HSPs)
chr7 (7-83)||(3468651-3468725)
chr7 (7-82)||(39345508-39345581)
[»] chr1 (2 HSPs)
chr1 (34-85)||(15581316-15581367)
chr1 (10-85)||(28837002-28837075)
[»] scaffold0311 (1 HSPs)
scaffold0311 (7-82)||(10577-10650)
[»] chr4 (1 HSPs)
chr4 (8-83)||(9843212-9843285)


Alignment Details
Target: chr6 (Bit Score: 355; Significance: 0; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 409
Target Start/End: Complemental strand, 31564734 - 31564316
Alignment:
Q  1 acatacggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31564734 acatatggaaataagctgaaaacaacttttgtggacatgtcattagttgtttccattaactcttcgaaacagtctcacaagtgctaatatgagtgtataa 31564635  T
Q  101 gttcaaatacatcaatccacaagaggcaaaacaatatgagaagatgggcaaaatggaagtataattcattttttctcttttacat------gtaaaaatt 194  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||      |||||||||    
T  31564634 gttcaaatatatcaatccacaagaggcaaaacaatatgaaaagatgggcaaaatggaagtataattaattttttctcttttacatttacatgtaaaaatt 31564535  T
Q  195 gaaatacatgtataaattcaaatctgtctaacatatttacttctattagatgtagaaaaattagaatagaaaca----gcaaataagatgaaattgaaac 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||    
T  31564534 gaaatacatgtataaattcaaatctgtctaacatatttacttctattagatgtagaaaaattagaatagaaacattaagcaaataagatgaaattgaaac 31564435  T
Q  291 cattactcgagcctttgtctgaagaagtaatgccggtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttcatcttc 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31564434 cattactcgagcctttgtctgaagaagtaatgccggtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttcatcttc 31564335  T
Q  391 aacttgtactaccacaggt 409  Q
    |||||||||||||||||||    
T  31564334 aacttgtactaccacaggt 31564316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 150 - 314
Target Start/End: Original strand, 33416366 - 33416536
Alignment:
Q  150 aaaatggaagtataat--tcattttttctcttttacatgtaaaaattgaaatacatgtataaattcaaatctgtctaacatatttacttctattagatgt 247  Q
    |||||||||||||| |  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| |    
T  33416366 aaaatggaagtatattcatcttttcttctcttttacatgtaaaaactgaaatacatgtataaattcaaatctgtccaacatatttacttctatttgatat 33416465  T
Q  248 agaaaaattagaatagaaa----cagcaaataagatgaaattgaaaccattactcgagcctttgtctgaag 314  Q
    |||||||| ||||| ||||     ||||||||||||||||| |||||| |||||||||||||  |||||||    
T  33416466 agaaaaatgagaattgaaatatgaagcaaataagatgaaatggaaacctttactcgagccttcatctgaag 33416536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 33385564 - 33385670
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaa 106  Q
    ||||| |||||||||||||||||| ||||||||||||  | ||||||||| |||||||| ||||||| ||||||||||| |||| | |  ||||||||||    
T  33385564 ggaaaaaagctgaaaacaacttttatggacatgtcatgagctgtttccataaactcttccaaacagtttcacaagtgcttatatcagtagataagttcaa 33385663  T
Q  107 atacatc 113  Q
    || ||||    
T  33385664 atgcatc 33385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 400
Target Start/End: Original strand, 33385707 - 33385837
Alignment:
Q  271 aaataagatgaaattgaaaccattactcgagcctttgtctgaagaagtaatgccggtttgtccattagaattagataagttgttgtttg-tctcggatgc 369  Q
    |||||||||||||||| |||| || ||| ||||||  ||||| |  ||||| ||||||||||||||||| ||||||| | ||||||||| | |   ||||    
T  33385707 aaataagatgaaattgcaacctttgctcaagccttcatctgacgctgtaattccggtttgtccattagagttagatacgctgttgtttgttttttaatgc 33385806  T
Q  370 aattgcaacttcttcatcttcaacttgtact 400  Q
    |||||||||||||||| ||||||||||||||    
T  33385807 aattgcaacttcttcaccttcaacttgtact 33385837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 33259861 - 33259959
Alignment:
Q  15 gctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaaatacatc 113  Q
    |||||||||| ||||| ||||||||||||| |  |||||||| |||||||| ||||||| |  |||||||| |||| | | ||||||||||||||||||    
T  33259861 gctgaaaacagcttttatggacatgtcattagccgtttccataaactcttccaaacagtttggcaagtgcttatatcaatatataagttcaaatacatc 33259959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 24631947 - 24631864
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatat 90  Q
    ||||||||||| |||||| ||||| ||||||| ||||  ||||||||||| |||||||| ||| ||| ||||||||||| ||||    
T  24631947 ggaaataagctaaaaacagcttttatggacatatcatgagttgtttccataaactcttccaaatagtttcacaagtgcttatat 24631864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 33281320 - 33281376
Alignment:
Q  326 gtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttca 385  Q
    ||||||||||||||||||||||   || ||||||||||||||||||||||||| ||||||    
T  33281320 gtttgtccattagaattagata---tgctgtttgtctcggatgcaattgcaacctcttca 33281376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 33416538 - 33416592
Alignment:
Q  343 agataagttgttgtttgtctcggatgcaattgcaacttcttcatcttcaacttgt 397  Q
    |||||||||| ||||||| || ||||||||||||||  |||||||||||||||||    
T  33416538 agataagttgctgtttgtttcagatgcaattgcaaccgcttcatcttcaacttgt 33416592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 33301947 - 33302003
Alignment:
Q  326 gtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttca 385  Q
    ||||||||||||||||||||||   || ||||||||||||||||||| ||||| ||||||    
T  33301947 gtttgtccattagaattagata---tgatgtttgtctcggatgcaatagcaacctcttca 33302003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 281881 - 281808
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagt 82  Q
    |||||||||||||||||||||| |   ||||||||||  |||| |||||||| |||| | ||||||||||||||||    
T  281881 ggaaataagctgaaaacaacttata--gacatgtcataagttgcttccattagctctcccaaacagtctcacaagt 281808  T

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Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 305
Target Start/End: Complemental strand, 30653360 - 30653203
Alignment:
Q  151 aaatggaagtataattcattttttctcttttacatgtaaaaattgaaatacatgtataaattcaaatctgtctaacatatttacttctattagatgtaga 250  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||||| |||||| | |||||||| ||    
T  30653360 aaatggaagtataatttattttttctcttttacatgtaaaaaccgaaagacatgtataagttcaaatctgtctaacataattactt-tgttagatgttga 30653262  T
Q  251 aaaattagaatagaaaca----gcaaataagatgaaattgaaaccattactcgagcctt 305  Q
    ||||||||||||||||||    |||||||||||||||||  |||| |||||||||||||    
T  30653261 aaaattagaatagaaacatgacgcaaataagatgaaattttaacctttactcgagcctt 30653203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 11457158 - 11457209
Alignment:
Q  32 tggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtg 83  Q
    ||||||||||||  ||||||||||| | |||||| |||||||||||||||||    
T  11457158 tggacatgtcataagttgtttccataagctcttcaaaacagtctcacaagtg 11457209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 3949 - 4047
Alignment:
Q  15 gctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaaatacatc 113  Q
    |||||||||| ||||| ||||||||||||  |  |||||||| |||||||| ||||||||||||||||||| |||| | | ||||||||||||||||||    
T  3949 gctgaaaacagcttttatggacatgtcatgagccgtttccataaactcttccaaacagtctcacaagtgcttatatcaatatataagttcaaatacatc 4047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 12932 - 12876
Alignment:
Q  326 gtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttca 385  Q
    ||||||||||||||||||||||   || ||||||||||||||||||||||||| ||||||    
T  12932 gtttgtccattagaattagata---tgctgtttgtctcggatgcaattgcaacctcttca 12876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 17443503 - 17443374
Alignment:
Q  268 agcaaataagatgaaattgaaaccattactcgagcctttgtctgaagaagtaatgccggtttgtccattagaattagataagttgttgtttgtctcggat 367  Q
    ||||||||||||||||||| |||| ||  || ||||||  |||||||  ||||||| ||||||||||||||| ||||||| |   |||||||| ||  ||    
T  17443503 agcaaataagatgaaattgcaacctttggtcaagccttcatctgaagctgtaatgctggtttgtccattagagttagatacgccattgtttgtttcaaat 17443404  T
Q  368 gcaattgcaacttcttcatcttcaacttgt 397  Q
    ||||||||||||||||||  ||||||||||    
T  17443403 gcaattgcaacttcttcacgttcaacttgt 17443374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 17443602 - 17443537
Alignment:
Q  48 tgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaaatacatc 113  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| | | ||||||||||||||||||    
T  17443602 tgtttccataaactcttccaaacagtctcacaagtgcttatatcagtatataagttcaaatacatc 17443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 14299663 - 14299588
Alignment:
Q  8 gaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 85  Q
    ||||||||||||||||||  | | |||| |||||||  ||||||||||| |||||||| |||||||| | ||||||||    
T  14299663 gaaataagctgaaaacaa--tgtatggatatgtcataagttgtttccataaactcttccaaacagtccctcaagtgct 14299588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 43199930 - 43199982
Alignment:
Q  67 aaacagtctcacaagtgctaatatgactgtataagttcaaatacatcaatcca 119  Q
    ||||||||||||||||||| |||||| |  ||||||||||||| || ||||||    
T  43199930 aaacagtctcacaagtgcttatatgagtagataagttcaaataaatgaatcca 43199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 13000457 - 13000381
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 85  Q
    ||||||||||||||||||||||  |||||||||||||  |||||| |||| |||||||  ||| |||||||||||||||    
T  13000457 ggaaataagctgaaaacaactt--gtggacatgtcataagttgttaccataaactcttgcaaatagtctcacaagtgct 13000381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 30191174 - 30191098
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 85  Q
    ||||||||||||||||||| |||||   |||||||||  ||||||||||| | |||| | ||||||||| |||||||||    
T  30191174 ggaaataagctgaaaacaagttttga--acatgtcataagttgtttccataagctctcccaaacagtctaacaagtgct 30191098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 43115093 - 43115167
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtg 83  Q
    ||||||||||||||||||| || ||  ||||||||||  ||||||||||| |||||||| ||||| |||||||||||    
T  43115093 ggaaataagctgaaaacaagttatg--gacatgtcataagttgtttccataaactcttccaaacaatctcacaagtg 43115167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 37273171 - 37273247
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 85  Q
    ||||||||| |||||||||||| ||  ||||||||||  ||||||||||| | |||| | |||||||||||| ||||||    
T  37273171 ggaaataagttgaaaacaacttatg--gacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgct 37273247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 24624250 - 24624344
Alignment:
Q  10 aataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaa 106  Q
    |||||||||||||||   ||| ||||||||||||  | ||||| ||| | |||||| ||||||||| |||||||||||| ||| |  ||||||||||    
T  24624250 aataagctgaaaacag--tttatggacatgtcataagctgttttcataagctcttccaaacagtcttacaagtgctaatgtgagtagataagttcaa 24624344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 3468651 - 3468725
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtg 83  Q
    ||||||||| || ||||||||| ||  ||||||||||| ||||||||||  |||||| ||||||||||||| |||||    
T  3468651 ggaaataagttggaaacaacttatg--gacatgtcattagttgtttccaacaactctccgaaacagtctcaaaagtg 3468725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 39345508 - 39345581
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagt 82  Q
    ||||||||||||||| |||||| ||  ||||||||||    ||||||||| |||||| | ||||||||||||||||    
T  39345508 ggaaataagctgaaagcaacttatg--gacatgtcataaactgtttccatgaactctaccaaacagtctcacaagt 39345581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 15581316 - 15581367
Alignment:
Q  34 gacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 85  Q
    ||||||||||  ||||||||||||| |||||| ||||| |||||||||||||    
T  15581316 gacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgct 15581367  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 28837075 - 28837002
Alignment:
Q  10 aataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 85  Q
    ||||||||||||||| ||| ||||  ||||||||| | |||||   |||| ||||| |||||||||||||||||||    
T  28837075 aataagctgaaaacagcttatgtg--catgtcattagctgttttggttaagtcttctaaacagtctcacaagtgct 28837002  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 10650 - 10577
Alignment:
Q  7 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagt 82  Q
    ||||||||||||||||||||  || ||||||||||||| ||||||| ||| | || |   ||||||||||||||||    
T  10650 ggaaataagctgaaaacaac--ttatggacatgtcattagttgtttacataagctttgtcaaacagtctcacaagt 10577  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 9843285 - 9843212
Alignment:
Q  8 gaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtg 83  Q
    |||||||||||||||||||  || |||| |||| ||| ||||||| | | | ||||| ||||||||||||||||||    
T  9843285 gaaataagctgaaaacaac--ttatggatatgtgattagttgttttcttaatctctttgaaacagtctcacaagtg 9843212  T

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