View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19589_low_47 (Length: 299)
Name: NF19589_low_47
Description: NF19589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19589_low_47 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 24 - 290
Target Start/End: Original strand, 53704713 - 53704979
Alignment:
| Q |
24 |
actataaacatcaacaatagcaagtgcaacgaattcatcgctaagcgaagggcttgttgaaaatacaattttagctatgaaatcatcacacatttgtctc |
123 |
Q |
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| T |
53704713 |
actataaccatcaacaatagcaagtgcaacgaattcatcgctaagcgaagggcttgttgacaatacaattttagctatgaaatcatcacacatttgtctc |
53704812 |
T |
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| Q |
124 |
aaactaaaaaatcttaaataactatcgtttgtaaccgaatactcacgaccgatatttgaataatcaaagcttaccacattagggaaagtgtgaataggag |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
53704813 |
aaactaaaaaatcttaaataactatcgtttgtaaccgaatactcacggccgatatttgaataatcaaagcttaccacgttagggaaagtgtgaataggag |
53704912 |
T |
|
| Q |
224 |
gaagaaaaagagtgacacatgttaagggattaaaaagacgaatctgaggggtttcattgagaattat |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53704913 |
gaagaaaaagagtgacacatgttaagggattaaaaagacgaatctgaggggtttcattgagaattat |
53704979 |
T |
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