View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19589_low_58 (Length: 250)

Name: NF19589_low_58
Description: NF19589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19589_low_58
NF19589_low_58
[»] chr7 (32 HSPs)
chr7 (48-250)||(46898361-46898566)
chr7 (48-205)||(9650042-9650204)
chr7 (48-128)||(40864484-40864564)
chr7 (49-128)||(8076928-8077007)
chr7 (48-128)||(27257149-27257229)
chr7 (65-207)||(15566167-15566314)
chr7 (53-127)||(19641226-19641300)
chr7 (55-128)||(47102462-47102535)
chr7 (48-128)||(9009067-9009147)
chr7 (56-207)||(47551985-47552130)
chr7 (56-128)||(10531948-10532020)
chr7 (55-169)||(13345500-13345619)
chr7 (65-169)||(19097286-19097396)
chr7 (67-125)||(39049444-39049502)
chr7 (48-116)||(11297665-11297733)
chr7 (56-128)||(13343514-13343586)
chr7 (207-250)||(10283117-10283160)
chr7 (57-124)||(44784352-44784419)
chr7 (62-128)||(10499210-10499276)
chr7 (62-128)||(10504239-10504305)
chr7 (56-125)||(13337649-13337718)
chr7 (69-128)||(18385753-18385813)
chr7 (48-123)||(43457295-43457370)
chr7 (129-186)||(7838954-7839011)
chr7 (56-89)||(13346447-13346480)
chr7 (65-117)||(838443-838495)
chr7 (65-117)||(845599-845651)
chr7 (65-117)||(852980-853032)
chr7 (65-117)||(1203623-1203675)
chr7 (65-117)||(1210984-1211036)
chr7 (65-117)||(8954349-8954401)
chr7 (203-247)||(26246436-26246480)
[»] chr4 (18 HSPs)
chr4 (48-205)||(13521067-13521229)
chr4 (48-128)||(7902193-7902273)
chr4 (48-128)||(41817719-41817799)
chr4 (50-128)||(3997149-3997227)
chr4 (48-128)||(34561336-34561416)
chr4 (56-128)||(15799224-15799296)
chr4 (55-125)||(42314710-42314780)
chr4 (48-128)||(15882324-15882404)
chr4 (65-169)||(26035087-26035197)
chr4 (56-127)||(3310138-3310209)
chr4 (63-126)||(31297618-31297678)
chr4 (67-128)||(39320494-39320555)
chr4 (206-250)||(7238707-7238751)
chr4 (56-125)||(1150444-1150513)
chr4 (212-249)||(27814302-27814339)
chr4 (65-117)||(14867888-14867940)
chr4 (65-117)||(14891302-14891354)
chr4 (207-247)||(39135883-39135923)
[»] chr8 (19 HSPs)
chr8 (48-128)||(25367089-25367169)
chr8 (48-128)||(4237422-4237502)
chr8 (48-128)||(4242161-4242241)
chr8 (48-128)||(34817824-34817904)
chr8 (48-128)||(37772638-37772718)
chr8 (55-128)||(8330474-8330547)
chr8 (48-128)||(31448946-31449026)
chr8 (56-190)||(14036305-14036443)
chr8 (48-121)||(17153440-17153513)
chr8 (57-121)||(43301822-43301885)
chr8 (48-122)||(17219899-17219973)
chr8 (59-169)||(10934111-10934226)
chr8 (65-169)||(16066307-16066417)
chr8 (65-169)||(22104708-22104818)
chr8 (59-121)||(29220988-29221050)
chr8 (77-190)||(42972967-42973085)
chr8 (67-207)||(4582381-4582527)
chr8 (206-250)||(27881550-27881594)
chr8 (206-250)||(28021731-28021775)
[»] chr3 (27 HSPs)
chr3 (48-128)||(45903663-45903743)
chr3 (48-128)||(3034576-3034656)
chr3 (48-128)||(3673498-3673578)
chr3 (48-128)||(3693552-3693632)
chr3 (48-128)||(8884103-8884183)
chr3 (48-128)||(10585272-10585352)
chr3 (49-169)||(53358970-53359095)
chr3 (48-169)||(6595509-6595636)
chr3 (48-128)||(8070612-8070692)
chr3 (64-169)||(631828-631938)
chr3 (56-128)||(35455970-35456042)
chr3 (65-128)||(8888863-8888926)
chr3 (48-128)||(12898831-12898910)
chr3 (63-128)||(35458206-35458271)
chr3 (67-207)||(8223925-8224071)
chr3 (206-250)||(54982123-54982167)
chr3 (81-128)||(53502153-53502200)
chr3 (67-207)||(30218-30364)
chr3 (65-169)||(14424814-14424924)
chr3 (66-169)||(8197481-8197589)
chr3 (202-250)||(34794285-34794333)
chr3 (65-128)||(429344-429407)
chr3 (208-250)||(11633300-11633342)
chr3 (203-241)||(51857610-51857648)
chr3 (207-247)||(7433411-7433451)
chr3 (57-125)||(19340320-19340387)
chr3 (207-247)||(26167702-26167742)
[»] chr1 (23 HSPs)
chr1 (48-128)||(41097040-41097120)
chr1 (48-169)||(1067305-1067431)
chr1 (48-128)||(3095022-3095102)
chr1 (48-128)||(8273238-8273318)
chr1 (48-128)||(40232474-40232554)
chr1 (55-125)||(26319334-26319404)
chr1 (48-128)||(23254299-23254381)
chr1 (49-98)||(17213255-17213304)
chr1 (65-121)||(22428279-22428335)
chr1 (65-158)||(14813468-14813567)
chr1 (67-204)||(19725007-19725150)
chr1 (65-169)||(26199393-26199503)
chr1 (48-106)||(33055734-33055792)
chr1 (206-247)||(42429832-42429873)
chr1 (206-250)||(49243994-49244038)
chr1 (61-124)||(2367993-2368056)
chr1 (61-124)||(2384326-2384389)
chr1 (207-250)||(6941593-6941636)
chr1 (49-127)||(8989025-8989103)
chr1 (56-169)||(27308018-27308136)
chr1 (210-247)||(17193106-17193143)
chr1 (201-250)||(47796529-47796578)
chr1 (65-168)||(16836382-16836490)
[»] chr5 (24 HSPs)
chr5 (52-169)||(15394940-15395062)
chr5 (48-126)||(42002368-42002446)
chr5 (48-128)||(13300571-13300651)
chr5 (48-128)||(36936592-36936672)
chr5 (48-128)||(36941346-36941426)
chr5 (48-128)||(41997575-41997655)
chr5 (48-128)||(557628-557708)
chr5 (48-128)||(562400-562480)
chr5 (48-128)||(2451850-2451930)
chr5 (48-128)||(8041304-8041384)
chr5 (48-128)||(21323122-21323202)
chr5 (48-169)||(3666760-3666886)
chr5 (48-169)||(12044213-12044339)
chr5 (48-128)||(24435259-24435339)
chr5 (48-128)||(31732474-31732554)
chr5 (48-128)||(32460626-32460710)
chr5 (52-127)||(36949655-36949730)
chr5 (55-169)||(27425242-27425361)
chr5 (67-169)||(8771150-8771257)
chr5 (201-250)||(35041192-35041241)
chr5 (65-121)||(21827290-21827346)
chr5 (206-250)||(35041564-35041608)
chr5 (65-117)||(26869401-26869453)
chr5 (206-250)||(35041746-35041790)
[»] chr6 (8 HSPs)
chr6 (52-168)||(2862622-2862743)
chr6 (52-168)||(2881925-2882046)
chr6 (56-169)||(15645560-15645678)
chr6 (65-207)||(14073994-14074143)
chr6 (65-169)||(26981586-26981696)
chr6 (67-169)||(27073968-27074076)
chr6 (65-128)||(6111860-6111923)
chr6 (65-117)||(18387864-18387916)
[»] scaffold0061 (1 HSPs)
scaffold0061 (48-128)||(49045-49125)
[»] scaffold0060 (2 HSPs)
scaffold0060 (48-128)||(47055-47135)
scaffold0060 (48-128)||(51999-52079)
[»] scaffold0041 (1 HSPs)
scaffold0041 (48-128)||(34806-34886)
[»] scaffold0017 (1 HSPs)
scaffold0017 (48-128)||(149509-149589)
[»] chr2 (19 HSPs)
chr2 (48-128)||(30659077-30659157)
chr2 (48-128)||(10159797-10159877)
chr2 (48-127)||(6296997-6297075)
chr2 (49-128)||(30629774-30629853)
chr2 (48-169)||(28856016-28856142)
chr2 (57-144)||(22845295-22845385)
chr2 (48-112)||(17452591-17452655)
chr2 (50-168)||(30619727-30619849)
chr2 (48-116)||(30641218-30641286)
chr2 (207-250)||(7495825-7495868)
chr2 (67-169)||(7559431-7559538)
chr2 (65-178)||(30640110-30640228)
chr2 (65-169)||(25375793-25375902)
chr2 (206-250)||(41347146-41347190)
chr2 (67-169)||(6857204-6857311)
chr2 (67-169)||(24292550-24292657)
chr2 (56-89)||(17328395-17328428)
chr2 (100-207)||(17452720-17452833)
chr2 (67-124)||(26903165-26903222)
[»] scaffold0182 (1 HSPs)
scaffold0182 (48-128)||(8961-9041)
[»] scaffold0020 (1 HSPs)
scaffold0020 (48-128)||(343-423)
[»] scaffold0070 (2 HSPs)
scaffold0070 (48-128)||(59337-59417)
scaffold0070 (48-128)||(63539-63619)
[»] scaffold0045 (1 HSPs)
scaffold0045 (48-169)||(83787-83913)
[»] scaffold0478 (2 HSPs)
scaffold0478 (48-128)||(3117-3197)
scaffold0478 (48-128)||(8495-8575)
[»] scaffold0211 (1 HSPs)
scaffold0211 (58-125)||(27438-27505)
[»] scaffold0327 (1 HSPs)
scaffold0327 (65-169)||(8684-8794)
[»] scaffold0357 (2 HSPs)
scaffold0357 (65-121)||(13020-13076)
scaffold0357 (65-169)||(3432-3542)
[»] scaffold0132 (1 HSPs)
scaffold0132 (65-207)||(24380-24528)
[»] scaffold0628 (2 HSPs)
scaffold0628 (63-121)||(5657-5715)
scaffold0628 (63-121)||(7365-7423)
[»] scaffold0044 (2 HSPs)
scaffold0044 (67-207)||(81528-81674)
scaffold0044 (67-169)||(65319-65426)
[»] scaffold0015 (1 HSPs)
scaffold0015 (67-207)||(192705-192851)
[»] scaffold0155 (1 HSPs)
scaffold0155 (67-168)||(22422-22529)
[»] scaffold1910 (1 HSPs)
scaffold1910 (65-169)||(743-853)
[»] scaffold0720 (1 HSPs)
scaffold0720 (48-116)||(5658-5726)


Alignment Details
Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 48 - 250
Target Start/End: Complemental strand, 46898566 - 46898361
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttag----aaagtgttttcttagtcgttttgataaaatat 143  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  46898566 tatattgatatatattttattatttggaaatgataaattaaataatcaatttaatcattgttagttagaaagtgttttcttagtcgttttgataaaatat 46898467  T
Q  144 tgtagaatgcaatctgaaatattttgagacgcaatttaaatattttgctgtgcaatctaatatagagcccgtttgttatagttttttcaaggaaaaaatc 243  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  46898466 tgtagaacgcaatctgaaatattttgagacacaatttaaatattttgctgtgcaatctaatataaagcccgtttgttatagttttttcaagga-aaaatc 46898368  T
Q  244 acttatt 250  Q
    |||||||    
T  46898367 acttatt 46898361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 9650042 - 9650204
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc----gttttgataaaatat 143  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    |||||| ||||||||    
T  9650042 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtcccaagttttgctaaaatat 9650141  T
Q  144 tgtagaatgcaatctgaaatattttgagacgcaattt-aaatattttgctgtgcaatctaata 205  Q
    | | || ||||||||  |||||||||  || |||||| |||||||| | |  |||||||||||    
T  9650142 tttggattgcaatctagaatattttggaacacaatttgaaatatttgggtaggcaatctaata 9650204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 40864484 - 40864564
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  40864484 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 40864564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 8077007 - 8076928
Alignment:
Q  49 atattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    
T  8077007 atattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtc 8076928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 27257229 - 27257149
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  27257229 tatattgatatatattttattatatagaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 27257149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 15566314 - 15566167
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc----gttttgataaaatattgtagaatgcaatctga 160  Q
    ||||||||||||||| ||||||||| ||| ||| ||  |||| |||||||||||||||||||||    |||||| ||||||||| | |||||||||||||    
T  15566314 tattatttggaaatgttaaattaaataattaatgtatacatttttagaaagtgttttcttagtccaaagttttgttaaaatattttggaatgcaatctga 15566215  T
Q  161 aatattttgagacgcaattt-aaatattttgctgtgcaatctaatata 207  Q
    |||||||||   | |||||| |||||||||| | ||||||||||||||    
T  15566214 aatattttggtgcacaatttgaaatattttggtatgcaatctaatata 15566167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 19641300 - 19641226
Alignment:
Q  53 tgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagt 127  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  19641300 tgatatatattttattatttgaaaatgataaattaaataattaatttaatcattgttagaaagtgtttttttagt 19641226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 47102535 - 47102462
Alignment:
Q  55 atatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  47102535 atatatattttattatttgaaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 47102462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 9009147 - 9009067
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||| |||||| ||||||||||||||| | | |||||||||||| |||||||||||||||||||||    
T  9009147 tatattgatatatattttactatttgaaaatgataaattaaatatttaatttaatcattattagaaagtgttttcttagtc 9009067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 207
Target Start/End: Original strand, 47551985 - 47552130
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtcgttttgataaaatattgtagaatgcaa 155  Q
    ||||||||||| |||||||||||| ||||||||  | | |||||||||||| |||||||||||||||||||||       ||||||||| | ||| | ||    
T  47551985 tatatattttactatttggaaatgttaaattaagtatttaatttaatcattattagaaagtgttttcttagtc-------taaaatattttggaaagtaa 47552077  T
Q  156 tctgaaatattttgagacgcaattt-aaatattttgctgtgcaatctaatata 207  Q
    ||| ||||||||||  || |||||| |||||||||| | ||||||||||||||    
T  47552078 tctaaaatattttggaacacaatttaaaatattttgatatgcaatctaatata 47552130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 10531948 - 10532020
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||| |||||||||||||||| | |  |||| |||||| |||||||||||||||||||||    
T  10531948 tatatattttattattttgaaatgataaattaaatatttcattttatcattattagaaagtgttttcttagtc 10532020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 13345619 - 13345500
Alignment:
Q  55 atatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtaga 149  Q
    ||||||||||||||||||||||||| | ||||||| ||| ||||||| |||| ||| |||||||||||||| ||     |||||| ||||||||| | |     
T  13345619 atatatattttattatttggaaatgtttaattaaataattaatttaaacattattaaaaagtgttttcttactctccgagttttgctaaaatattttggt 13345520  T
Q  150 atgcaatctgaaatattttg 169  Q
    ||||||||  ||||||||||    
T  13345519 atgcaatcgaaaatattttg 13345500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 19097396 - 19097286
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||     |||||| ||||||||| ||||| |||||||    
T  19097396 tattatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgcttttctttgtctccatgttttgctaaaatattttagaacgcaatct 19097297  T
Q  159 gaaatattttg 169  Q
      |||||||||    
T  19097296 agaatattttg 19097286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 39049444 - 39049502
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctta 125  Q
    ||||||| ||||| ||||||||| ||| |||||||||||| ||||||||||||||||||    
T  39049444 ttatttgaaaatgttaaattaaataattaatttaatcattattagaaagtgttttctta 39049502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 11297733 - 11297665
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagt 116  Q
    |||||||||||||||||||||||||||||||  ||||| |||  || | |||||||||| |||||||||    
T  11297733 tatattgatatatattttattatttggaaatattaaatgaaattattattttaatcattattagaaagt 11297665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 13343514 - 13343586
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||| |||||||||||||||| | | ||||| || ||| || ||||||| ||||||||||    
T  13343514 tatatattttattattttgaaatgataaattaaatatttaattttattattattcgaaagtgctttcttagtc 13343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 10283117 - 10283160
Alignment:
Q  207 agagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  10283117 agagcccgtttgttatagtttttttaagaaaaaaatcacttatt 10283160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 44784419 - 44784352
Alignment:
Q  57 atatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctt 124  Q
    ||||||||||| |||| |||||| ||||||||| ||| |||||||||| | ||| |||||||||||||    
T  44784419 atatattttatcatttagaaatgttaaattaaataattaatttaatcaatattaaaaagtgttttctt 44784352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 10499210 - 10499276
Alignment:
Q  62 ttttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| |||||| |||||||||||||||| | | ||||| |||||| |||||||||| ||||||||||    
T  10499210 tttttttattttgaaatgataaattaaatatttaattttatcattattagaaagtgctttcttagtc 10499276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 10504239 - 10504305
Alignment:
Q  62 ttttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| |||||| |||||||||||||||| | | ||||| |||||| |||||||||| ||||||||||    
T  10504239 tttttttattttgaaatgataaattaaatatttaattttatcattattagaaagtgctttcttagtc 10504305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 13337718 - 13337649
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctta 125  Q
    |||||||||||||||||||||||| | ||||||| ||  |||||||  ||| ||| ||||||||||||||    
T  13337718 tatatattttattatttggaaatgtttaattaaataactaatttaaagattattaaaaagtgttttctta 13337649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 18385753 - 18385813
Alignment:
Q  69 atttggaaatgataaattaaacaatcaa-tttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||| ||| || |||||||||| ||| | |||||||||||||||    
T  18385753 atttggaaatgataaattaaataattaagtttaatcattattaaagagtgttttcttagtc 18385813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 43457295 - 43457370
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttct 123  Q
    |||||| | |||||| |||||||||  ||||| ||||||||| |||  ||||||||||| ||| ||||||||||||    
T  43457295 tatattaaaatatatattattatttaaaaatgttaaattaaataattgatttaatcattattaaaaagtgttttct 43457370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 7839011 - 7838954
Alignment:
Q  129 gttttgataaaatattgtagaatgcaatctgaaatattttgagacgcaatttaaatat 186  Q
    |||||| ||||||||| | ||||||||||| ||||||||||| | ||||| |||||||    
T  7839011 gttttgctaaaatattttcgaatgcaatctaaaatattttgatatgcaatctaaatat 7838954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 13346447 - 13346480
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaa 89  Q
    ||||||||||||||||| ||||||||||||||||    
T  13346447 tatatattttattattttgaaatgataaattaaa 13346480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 838443 - 838495
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    |||| |||||||||||||||||||| | | |||||||||||| ||| ||||||    
T  838443 tattgtttggaaatgataaattaaatatttaatttaatcattattaaaaagtg 838495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 845599 - 845651
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    |||| |||||||||||||||||||| | | |||||||||||| ||| ||||||    
T  845599 tattgtttggaaatgataaattaaatatttaatttaatcattattaaaaagtg 845651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 852980 - 853032
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    |||| |||||||||||||||||||| | | |||||||||||| ||| ||||||    
T  852980 tattgtttggaaatgataaattaaatatttaatttaatcattattaaaaagtg 853032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 1203623 - 1203675
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    |||| |||||||||||||||||||| | | |||||||||||| ||| ||||||    
T  1203623 tattgtttggaaatgataaattaaatatttaatttaatcattattaaaaagtg 1203675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 1210984 - 1211036
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    |||| |||||||||||||||||||| | | |||||||||||| ||| ||||||    
T  1210984 tattgtttggaaatgataaattaaatatttaatttaatcattattaaaaagtg 1211036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 8954349 - 8954401
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    ||||||||| ||||||||||||||| | | |||||||||||| ||| ||||||    
T  8954349 tattatttgaaaatgataaattaaatatttaatttaatcattattaaaaagtg 8954401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 26246436 - 26246480
Alignment:
Q  203 atatagagcccgtttgttatagttttttcaaggaaaaaatcactt 247  Q
    |||||||||||||||||||||| |||||  ||| |||||||||||    
T  26246436 atatagagcccgtttgttataggttttttcagggaaaaatcactt 26246480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 13521067 - 13521229
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc----gttttgataaaatat 143  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    |||||| ||||||||    
T  13521067 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtcccaagttttgctaaaatat 13521166  T
Q  144 tgtagaatgcaatctgaaatattttgagacgcaattt-aaatattttgctgtgcaatctaata 205  Q
    | | || ||||||||  |||||||||  || |||||| |||||||| | |  |||||||||||    
T  13521167 tttggattgcaatctagaatattttggaacacaatttgaaatatttgggtaggcaatctaata 13521229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 7902193 - 7902273
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  7902193 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 7902273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 41817799 - 41817719
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  41817799 tatattgatatatattttattatttgaaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 41817719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 3997149 - 3997227
Alignment:
Q  50 tattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  3997149 tattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 3997227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 34561416 - 34561336
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  34561416 tatattgatatatattttattatatgaaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 34561336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 15799224 - 15799296
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  15799224 tatatattttattatttagaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 15799296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 42314710 - 42314780
Alignment:
Q  55 atatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctta 125  Q
    |||||||||||||||| ||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||    
T  42314710 atatatattttattatatggaaatgacaaattaaataattaatttaatcattattagaaagtgttttctta 42314780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 15882324 - 15882404
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||  ||||| ||| ||| | |||||||||| ||||||||| ||||| |||||    
T  15882324 tatattgatatatattttattatttggaaatattaaatgaaaaaattactttaatcattattagaaagttttttcatagtc 15882404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 26035197 - 26035087
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||     |||||| ||||||||| |||||||||||||    
T  26035197 tattatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgcttttctttgtctccatgttttgctaaaatattttagaatgcaatct 26035098  T
Q  159 gaaatattttg 169  Q
      |||||||||    
T  26035097 agaatattttg 26035087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 3310209 - 3310138
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagt 127  Q
    |||||||||||||||||  ||||| ||||||||| ||| |  ||||||||| ||||||||||||||||||||    
T  3310209 tatatattttattatttaaaaatgttaaattaaataattatgttaatcattattagaaagtgttttcttagt 3310138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 31297618 - 31297678
Alignment:
Q  63 tttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttag 126  Q
    ||||||||||||||||||||||||||| | | ||||||||||   |||||||||||||||||||    
T  31297618 tttattatttggaaatgataaattaaatagttaatttaatca---ttagaaagtgttttcttag 31297678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 39320555 - 39320494
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||| ||||||||||||||| |||  ||||||||||| |||||||||||||| ||||||    
T  39320555 ttatttgaaaatgataaattaaataatttatttaatcattattagaaagtgtttttttagtc 39320494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 7238707 - 7238751
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  7238707 tagagcccgtttggtatagttttttcaagaaaaaaatcacttatt 7238751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 1150444 - 1150513
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctta 125  Q
    |||||||||||||| ||| ||||| ||||||||| ||| ||||| |  ||| ||||||||||||||||||    
T  1150444 tatatattttattaattgtaaatgttaaattaaataattaattttactattattagaaagtgttttctta 1150513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 27814302 - 27814339
Alignment:
Q  212 ccgtttgttatagttttttcaaggaaaaaatcacttat 249  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  27814302 ccgtttgttatagtttttttaagaaaaaaatcacttat 27814339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 14867888 - 14867940
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    ||||||||| ||||||||||||||| | | |||||||||||| ||| ||||||    
T  14867888 tattatttgaaaatgataaattaaatatttaatttaatcattattaaaaagtg 14867940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 14891302 - 14891354
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    ||||||||| ||||||||||||||| | | |||||||||||| ||| ||||||    
T  14891302 tattatttgcaaatgataaattaaatatttaatttaatcattattaaaaagtg 14891354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 39135883 - 39135923
Alignment:
Q  207 agagcccgtttgttatagttttttcaaggaaaaaatcactt 247  Q
    ||||||||||||||||| |||||| ||| ||||||||||||    
T  39135883 agagcccgtttgttataatttttttaagaaaaaaatcactt 39135923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 25367089 - 25367169
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  25367089 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 25367169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 4237422 - 4237502
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  4237422 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 4237502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 4242161 - 4242241
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  4242161 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 4242241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 34817824 - 34817904
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  34817824 tatattgatatatattttattatttggaaatgttaaattaaataattaatttaatcattattagaaagtgttttcttagtc 34817904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 37772718 - 37772638
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||| |||||    
T  37772718 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcctagtc 37772638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 8330474 - 8330547
Alignment:
Q  55 atatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  8330474 atatatatattattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 8330547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 31448946 - 31449026
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||  |||||||||    
T  31448946 tatattgatatatattttattatttggaaatgataaattaaataattaatttaataattattagaaagtgccttcttagtc 31449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 14036443 - 14036305
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaa 150  Q
    ||||||||||||||||||||||||  |||||||| ||| |||||||||||| |||  ||  ||||||||||||     |||||| ||||||||| | |||    
T  14036443 tatatattttattatttggaaatgtgaaattaaataattaatttaatcattattatgaa--gttttcttagtcatcaagttttgttaaaatattttggaa 14036346  T
Q  151 tgcaatctgaaatattttgagacgcaatttaa-atattttg 190  Q
     ||||||||||||||||||| | ||||| ||| ||||||||    
T  14036345 cgcaatctgaaatattttgatatgcaatctaatatattttg 14036305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 17153513 - 17153440
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgtttt 121  Q
    |||||||||||||||||||||||||||||||  ||||| ||| ||| | |||||||||| ||||||||| ||||    
T  17153513 tatattgatatatattttattatttggaaatattaaatgaaataattactttaatcattattagaaagtttttt 17153440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 43301822 - 43301885
Alignment:
Q  57 atatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgtttt 121  Q
    |||||| ||||| |||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  43301822 atatatattatt-tttggaaatgataaattaaataattaatttaatcattattagaaagtgtttt 43301885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 17219899 - 17219973
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttc 122  Q
    |||||||||||||||||||||||||||||||  ||||| ||| ||| | |||| ||||| ||||||||| |||||    
T  17219899 tatattgatatatattttattatttggaaatattaaatgaaataattactttattcattattagaaagttttttc 17219973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 10934226 - 10934111
Alignment:
Q  59 atattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgc 153  Q
    ||||||||||||||  ||||| | ||||||| ||| |||| ||||||| ||| |||||||||||||| ||     ||||||||||||| || | || |||    
T  10934226 atattttattatttcaaaatgttcaattaaataattaattgaatcattattataaagtgttttcttaatccttgagttttgataaaatcttttggagtgc 10934127  T
Q  154 aatctgaaatattttg 169  Q
    ||| ||||||||||||    
T  10934126 aatttgaaatattttg 10934111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 16066307 - 16066417
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    |||||||||||||||||| |||||| | | |||||||||||||||| |||||| ||||||| |||     |||||| ||||||||| ||||| | |||||    
T  16066307 tattatttggaaatgatatattaaatatttaatttaatcattgttaaaaagtgcttttctttgtccccatgttttgctaaaatattttagaacgtaatct 16066406  T
Q  159 gaaatattttg 169  Q
      |||||||||    
T  16066407 agaatattttg 16066417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 22104818 - 22104708
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    |||| |||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||     |||||| ||||||||| ||||| |||||||    
T  22104818 tattgtttggaaatgataaattaaatatttaatttaatcattattaaaaagtgcttttctttgtctccatgttttgctaaaatattttagaacgcaatct 22104719  T
Q  159 gaaatattttg 169  Q
      |||||||||    
T  22104718 agaatattttg 22104708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 29221050 - 29220988
Alignment:
Q  59 atattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgtttt 121  Q
    |||||| |||||||| ||||| ||| ||||| ||| |||||||||||| ||||||||||||||    
T  29221050 atatttaattatttgaaaatgttaatttaaataattaatttaatcattattagaaagtgtttt 29220988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 42973085 - 42972967
Alignment:
Q  77 atgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaaatattttgag 171  Q
    ||||||||||||| ||| |||||||||||  |||||||||||||| | ||||     |||||| ||||||||| | ||| ||||||| ||||||||||      
T  42973085 atgataaattaaataattaatttaatcatcattagaaagtgttttttgagtccccaagttttggtaaaatattttggaacgcaatctaaaatattttgga 42972986  T
Q  172 acgcaatttaaatattttg 190  Q
    || ||||  ||||||||||    
T  42972985 acacaataaaaatattttg 42972967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 4582381 - 4582527
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||||||||| ||| ||| |  ||||| ||| |||||| |||||| |||     |||||| |||| |||| | |||||||||||  |    
T  4582381 ttatttggaaatgataaattaaataattaatctggtcattattaaaaagtgctttcttggtccccaagttttgctaaattattttggaatgcaatctaga 4582480  T
Q  162 atattttgagacgcaat-ttaaatattttgctgtgcaatctaatata 207  Q
    ||||||||  || |||| | |||||||||| |  |||||||||||||    
T  4582481 atattttggaacacaatctaaaatattttggtaggcaatctaatata 4582527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 27881594 - 27881550
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||||||| |||||||||| ||||| ||| |||||||||||||||    
T  27881594 tagagcccatttgttatagcttttttaagaaaaaaatcacttatt 27881550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 28021775 - 28021731
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||||||| |||||||||| ||||| ||| |||||||||||||||    
T  28021775 tagagcccatttgttatagcttttttaagaaaaaaatcacttatt 28021731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 45903663 - 45903743
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  45903663 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 45903743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 3034656 - 3034576
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  3034656 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 3034576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 3673578 - 3673498
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  3673578 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 3673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 3693632 - 3693552
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  3693632 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 3693552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 8884183 - 8884103
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    
T  8884183 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtc 8884103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 10585272 - 10585352
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  10585272 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 10585352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 53359095 - 53358970
Alignment:
Q  49 atattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatat 143  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||| ||||||| |||     |||||||||||||||    
T  53359095 atattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattaaaaagtattttcttcgtccccaagttttgataaaatat 53358996  T
Q  144 tgtagaatgcaatctgaaatattttg 169  Q
    | | |||  |||| ||||||||||||    
T  53358995 tttggaacacaatatgaaatattttg 53358970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 169
Target Start/End: Original strand, 6595509 - 6595636
Alignment:
Q  48 tatattgatatatattttattatttg-gaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaat 141  Q
    |||||||||||||||||||||||||  |||||| ||||||||  ||| ||||||||||||||||||||||| ||||||||||     |||||| ||||||    
T  6595509 tatattgatatatattttattatttttgaaatgttaaattaagtaattaatttaatcattgttagaaagtgctttcttagtccccaagttttgctaaaat 6595608  T
Q  142 attgtagaatgcaatctgaaatattttg 169  Q
    ||| ||||| ||||||| ||||||||||    
T  6595609 attttagaacgcaatctaaaatattttg 6595636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 8070692 - 8070612
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||| ||||||||||    
T  8070692 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattataagaaagtgctttcttagtc 8070612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 631938 - 631828
Alignment:
Q  64 ttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    |||||||||||| ||||||||||||| ||| |||||||| ||| |||||||||||||||||||||     |||||| ||||||||| | |||| ||||||    
T  631938 ttattatttggagatgataaattaaataattaatttaattattattagaaagtgttttcttagtccccaagttttgctaaaatattttggaatacaatct 631839  T
Q  159 gaaatattttg 169  Q
    |||||||||||    
T  631838 gaaatattttg 631828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 35455970 - 35456042
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||| | ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  35455970 tatatattttattattggaaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 35456042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 8888926 - 8888863
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  8888926 tattatttggaaatgataaattaaataataaatttaatcattattagaaagtgttttcttagtc 8888863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 12898831 - 12898910
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||| ||||||||||||||||| | ||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||    
T  12898831 tatattaatatatattttattattag-aaatgataaattaaataattaatttaatcattattagaaagttttttcttagtc 12898910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 35458271 - 35458206
Alignment:
Q  63 tttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||| || |||||| |||||| |||| |||| |||||||||||||||||||||    
T  35458271 tttattatttggaaatgttagattaaataatcaaattaaacattattagaaagtgttttcttagtc 35458206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 8224071 - 8223925
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||||||||| ||| |||||  ||||| ||| ||||||||||||| |||     |||||| |||| |||| ||||| |||||||  |    
T  8224071 ttatttggaaatgataaattaaataattaatttggtcattattaaaaagtgttttcttggtccccaagttttgctaaattattttagaacgcaatctaga 8223972  T
Q  162 atattttgagacgcaat-ttaaatattttgctgtgcaatctaatata 207  Q
    ||||||||  || |||| | |||||||||| |  |||||||||||||    
T  8223971 atattttggaacacaatctaaaatattttggtaagcaatctaatata 8223925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 54982167 - 54982123
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||||||||||| |||||||||||| |||||||||||||||||||    
T  54982167 tagagcccgtttattatagtttttttaaggaaaaaatcacttatt 54982123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 53502153 - 53502200
Alignment:
Q  81 taaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||||||    
T  53502153 taaattaaacaattaatttattcattattagaaagtgttttcttagtc 53502200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 30364 - 30218
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||||||||| ||| |||||  ||||| ||| |||||| |||||| |||     |||||| |||| |||| ||||| |||||||  |    
T  30364 ttatttggaaatgataaattaaataattaatttggtcattattaaaaagtgctttcttggtcccaaagttttgctaaattattttagaacgcaatctaga 30265  T
Q  162 atattttgagacgcaat-ttaaatattttgctgtgcaatctaatata 207  Q
    ||||||||  || |||| | |||||||||| |  |||||||||||||    
T  30264 atattttggaacacaatctaaaatattttggtaggcaatctaatata 30218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 14424814 - 14424924
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    |||| |||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||     |||||| ||||||||| ||||| |||||||    
T  14424814 tattgtttggaaatgataaattaaatatttaatttaatcattattaaaaagtgcttttctttgtctccatgttttgctaaaatattttagaacgcaatct 14424913  T
Q  159 gaaatattttg 169  Q
      |||||||||    
T  14424914 agaatattttg 14424924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 8197589 - 8197481
Alignment:
Q  66 attatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctga 160  Q
    |||||||||||||||||||||||| ||| |||||  ||||| ||| |||||| |||||| |||     |||||| |||| |||| ||||| |||||||      
T  8197589 attatttggaaatgataaattaaataattaatttggtcattattaaaaagtgctttcttggtccccaagttttgctaaattattttagaacgcaatctag 8197490  T
Q  161 aatattttg 169  Q
    |||||||||    
T  8197489 aatattttg 8197481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 34794285 - 34794333
Alignment:
Q  202 aatatagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    ||||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  34794285 aatatagcgtccgtttgttatagtttttttaagaaaaaaatcacttatt 34794333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 429407 - 429344
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||  ||||| ||||||||| ||| ||||||| |||| ||||||||||||||| |||||    
T  429407 tattatttaaaaatgttaaattaaataattaatttaaacattattagaaagtgttttcgtagtc 429344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 11633342 - 11633300
Alignment:
Q  208 gagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||| |||||||||||||||||| ||| |||||||||||||||    
T  11633342 gagctcgtttgttatagtttttttaagaaaaaaatcacttatt 11633300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 51857610 - 51857648
Alignment:
Q  203 atatagagcccgtttgttatagttttttcaaggaaaaaa 241  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  51857610 atatagagcccgtttgttatagtttttttaagaaaaaaa 51857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 7433411 - 7433451
Alignment:
Q  207 agagcccgtttgttatagttttttcaaggaaaaaatcactt 247  Q
    |||| ||||||||||||||||||| ||| ||||||||||||    
T  7433411 agagtccgtttgttatagtttttttaagaaaaaaatcactt 7433451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 19340387 - 19340320
Alignment:
Q  57 atatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctta 125  Q
    ||||||||||| ||||||||||| ||||||||  ||| ||||| |||| | |||||||||||| |||||    
T  19340387 atatattttataatttggaaatgttaaattaagtaattaattt-atcaatattagaaagtgttatctta 19340320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 26167702 - 26167742
Alignment:
Q  207 agagcccgtttgttatagttttttcaaggaaaaaatcactt 247  Q
    |||||||||||||||||| ||||| ||| ||||||||||||    
T  26167702 agagcccgtttgttatagcttttttaagaaaaaaatcactt 26167742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 41097040 - 41097120
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  41097040 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 41097120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 1067431 - 1067305
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaata 142  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||     |||||| |||||||    
T  1067431 tatattgatatatattttattatttgaaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtctccaagttttgctaaaata 1067332  T
Q  143 ttgtagaatgcaatctgaaatattttg 169  Q
    || ||||| |||||||  |||||||||    
T  1067331 ttttagaacgcaatctagaatattttg 1067305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 3095102 - 3095022
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  3095102 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 3095022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 8273238 - 8273318
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| ||| |||||||||||||||||||||    
T  8273238 tatattgatatatattttattatttggaaatgataaattaaataattaatctaattattattagaaagtgttttcttagtc 8273318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 40232474 - 40232554
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||    
T  40232474 tatatcgatatatattttattatttggaaatgataaattaaataattaatttaatcattagtagaaagtgttttcttagtc 40232554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 26319334 - 26319404
Alignment:
Q  55 atatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctta 125  Q
    |||||||||||||| |||| ||||||||||||||| ||| ||| |||||||| |||||||||| |||||||    
T  26319334 atatatattttattgtttgaaaatgataaattaaataattaatataatcattattagaaagtgctttctta 26319404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 23254299 - 23254381
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaatta--aacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||| ||||||||||||||||||  ||||| |||| ||  || |||||||||||||||| ||| |||||||||||||||||    
T  23254299 tatattcatatatattttattatttaaaaatgttaaaatataaataatcaatttaatcattattaaaaagtgttttcttagtc 23254381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 17213255 - 17213304
Alignment:
Q  49 atattgatatatattttattatttggaaatgataaattaaacaatcaatt 98  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  17213255 atattgatatatattttattatttgtaaatgataaattaaataattaatt 17213304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 22428279 - 22428335
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgtttt 121  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||| ||||||||||    
T  22428279 tattatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgtttt 22428335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 14813567 - 14813468
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||     |||||| ||||||||| ||||| |||||||    
T  14813567 tattatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgcttttctttgtctccatgttttgctaaaatattttagaacgcaatct 14813468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 19725007 - 19725150
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||| ||||||||||||||  | | |||||||||||| ||| ||||||||||||| |||     |||||| ||||||||| ||||| |||||||  |    
T  19725007 ttatttgaaaatgataaattaattatttaatttaatcattattaaaaagtgttttctttgtccccaagttttgctaaaatattttagaacgcaatctaga 19725106  T
Q  162 atattttgagacgcaat-ttaaatattttgctgtgcaatctaat 204  Q
    ||| ||||| || |||| | |||||||||| |  ||||||||||    
T  19725107 ataatttgaaactcaatctgaaatattttggttggcaatctaat 19725150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 26199503 - 26199393
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    |||| |||||||||||||||||||| | |  ||||||||||||||| |||||| ||||||  |||     |||||| ||||||||| ||||| |||||||    
T  26199503 tattgtttggaaatgataaattaaatatttgatttaatcattgttaaaaagtgcttttctctgtctccatgttttgctaaaatattttagaacgcaatct 26199404  T
Q  159 gaaatattttg 169  Q
     ||||||||||    
T  26199403 aaaatattttg 26199393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 33055792 - 33055734
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcatt 106  Q
    |||||||||||||||||||||||| ||||||||||||| |||  || ||||||| ||||    
T  33055792 tatattgatatatattttattattaggaaatgataaatgaaatgattaatttaaacatt 33055734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 42429873 - 42429832
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcactt 247  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  42429873 tagagcccgtttgttatagcttttttaaggaaaaaatcactt 42429832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 49244038 - 49243994
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||    
T  49244038 tagagccggtttgttatagctttttcaaggaaaaaatcatttatt 49243994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 2368056 - 2367993
Alignment:
Q  61 attttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctt 124  Q
    ||||| ||||||||||||||||||||||| ||| |||||  ||||| ||| |||||| ||||||    
T  2368056 atttttttatttggaaatgataaattaaataattaatttggtcattattaaaaagtgctttctt 2367993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 2384326 - 2384389
Alignment:
Q  61 attttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctt 124  Q
    ||||| ||||||||||||||||||||||| ||| |||||  ||||| ||| |||||| ||||||    
T  2384326 atttttttatttggaaatgataaattaaataattaatttggtcattattaaaaagtgctttctt 2384389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 6941636 - 6941593
Alignment:
Q  207 agagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||| |||||||||||||||||||||| |||||||||| |||||    
T  6941636 agagtccgtttgttatagttttttcaaagaaaaaatcagttatt 6941593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 8989025 - 8989103
Alignment:
Q  49 atattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagt 127  Q
    |||||| |||||||||||||||||  ||||  ||||||||| ||| |||||||| ||| ||| ||| || |||||||||    
T  8989025 atattgttatatattttattattttcaaatattaaattaaataattaatttaattattattaaaaattgctttcttagt 8989103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 27308018 - 27308136
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaa 150  Q
    |||| ||||||| ||||| ||||  ||||||||| ||| |||||||||||| || ||||||| ||||||| ||     | |||||||||||||| | |||    
T  27308018 tataaattttatcatttgaaaatattaaattaaataattaatttaatcattattggaaagtgctttcttaatccccaagctttgataaaatattttggaa 27308117  T
Q  151 tgcaatctgaaatattttg 169  Q
     ||||| | ||||||||||    
T  27308118 cgcaatataaaatattttg 27308136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 17193106 - 17193143
Alignment:
Q  210 gcccgtttgttatagttttttcaaggaaaaaatcactt 247  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  17193106 gcccgtttgttatagtttttttatggaaaaaatcactt 17193143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 47796578 - 47796529
Alignment:
Q  201 taatatagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||| ||||||||||||||||||| ||||| ||| | |||||||||||||    
T  47796578 taatttagagcccgtttgttatagcttttttaagaacaaaatcacttatt 47796529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 16836382 - 16836490
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctg 159  Q
    ||||||||| ||||||||||||||| | | ||||| ||| || ||| |||||| |||||| |||     |||||| ||||||||| ||||| |||||||     
T  16836382 tattatttgaaaatgataaattaaatatttaatttgatcgttattaaaaagtgatttctttgtccccaagttttgctaaaatattttagaacgcaatcta 16836481  T
Q  160 aaatatttt 168  Q
     ||||||||    
T  16836482 gaatatttt 16836490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 15394940 - 15395062
Alignment:
Q  52 ttgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgt 146  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||     |||||| ||||||||| |    
T  15394940 ttgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtccccaagttttgctaaaatatttt 15395039  T
Q  147 agaatgcaatctgaaatattttg 169  Q
    ||||  ||||||  |||||||||    
T  15395040 agaacacaatctagaatattttg 15395062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 42002446 - 42002368
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttag 126  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  42002446 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttag 42002368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 13300571 - 13300651
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  13300571 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 13300651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 36936592 - 36936672
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  36936592 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 36936672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 36941346 - 36941426
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  36941346 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 36941426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 41997655 - 41997575
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    
T  41997655 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtc 41997575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 557708 - 557628
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    
T  557708 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtc 557628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 562480 - 562400
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    
T  562480 tatactgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtc 562400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 2451930 - 2451850
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||    
T  2451930 tatattgatatatattttattatttagaaatgataaattaaataattaatttaattattattagaaagtgttttcttagtc 2451850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 8041304 - 8041384
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||| |||||    
T  8041304 tatattgatatatattttattatttagaaatgataaattaaataattaatttaatcattattagaaagtgttttcgtagtc 8041384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 21323122 - 21323202
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||    
T  21323122 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattacaaagtgttttcttagtc 21323202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 3666886 - 3666760
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaata 142  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| | |||||||||| |||||||||| ||||||||||     |||||| |||||||    
T  3666886 tatattgatatatattttattatctggaaatgataaattaaataattagtttaatcattattagaaagtgctttcttagtccctaagttttgctaaaata 3666787  T
Q  143 ttgtagaatgcaatctgaaatattttg 169  Q
    || | ||| ||||||  ||||||||||    
T  3666786 ttttggaacgcaatcgaaaatattttg 3666760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 169
Target Start/End: Original strand, 12044213 - 12044339
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaata 142  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||     |||||| |||||||    
T  12044213 tatattgatatatattttattgtctggaaatgataaattaaataattaatttaatcattattagaaagtgatttcttagtccccaagttttgttaaaata 12044312  T
Q  143 ttgtagaatgcaatctgaaatattttg 169  Q
    || | ||| |||||||  |||||||||    
T  12044313 ttttggaacgcaatctagaatattttg 12044339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 24435259 - 24435339
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||| || ||||||| ||||||||||    
T  24435259 tatattgatatatattttattatttggaaatgataaattaaaggattaatttaatcattatttgaaagtgctttcttagtc 24435339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 31732554 - 31732474
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||| |||||||||||| ||||||||||||||| |||||    
T  31732554 tatattgatatatattttattatatgaaaatgataaattaaataattaatttaatcattattagaaagtgttttcctagtc 31732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 32460626 - 32460710
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttaga----aagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    ||||||||||||||||    
T  32460626 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagatagtaagtgttttcttagtc 32460710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 36949730 - 36949655
Alignment:
Q  52 ttgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagt 127  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||| |||||||||    
T  36949730 ttgatatatattttattatttggaaatgataaattaaataattaatttaatcgttattagaaagtgctttcttagt 36949655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 27425361 - 27425242
Alignment:
Q  55 atatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtaga 149  Q
    |||||||||||||||||| || ||| ||||||||| ||| | |||||||||| |||||||||||||||||| ||     |||||| ||||||||| |  |    
T  27425361 atatatattttattatttagagatgttaaattaaataattattttaatcattattagaaagtgttttcttactccctaagttttgttaaaatattttgaa 27425262  T
Q  150 atgcaatctgaaatattttg 169  Q
    | ||||||| ||||||||||    
T  27425261 acgcaatctaaaatattttg 27425242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 8771257 - 8771150
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||||||||  | | |||||||||||| ||| ||||||||||||| |||     |||||| ||||||||| ||||| |||| || ||    
T  8771257 ttatttggaaatgataaattaattatttaatttaatcattattaaaaagtgttttctttgtccccaagttttgctaaaatattttagaacgcaaactaaa 8771158  T
Q  162 atattttg 169  Q
    ||||||||    
T  8771157 atattttg 8771150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 35041241 - 35041192
Alignment:
Q  201 taatatagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||| ||||||||||||||||||| ||||| ||| |||||||||||||||    
T  35041241 taatttagagcccgtttgttatagcttttttaagaaaaaaatcacttatt 35041192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 21827346 - 21827290
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgtttt 121  Q
    |||| |||||||||||||||||||| | |  ||||||||||||||| ||||||||||    
T  21827346 tattgtttggaaatgataaattaaatatttgatttaatcattgttaaaaagtgtttt 21827290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 35041564 - 35041608
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||    
T  35041564 tagagtccgtttgttataggtttttcaaggaaaaaaacacttatt 35041608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 26869401 - 26869453
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    |||| |||||||||||||||||||| | |  ||||||||||||||| ||||||    
T  26869401 tattgtttggaaatgataaattaaatatttgatttaatcattgttaaaaagtg 26869453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 35041746 - 35041790
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||||    
T  35041746 tagagcacgtttgttatagcttttttaagaaaaaaatcacttatt 35041790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 2862622 - 2862743
Alignment:
Q  52 ttgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgt 146  Q
    |||||||||||||||||||||| ||||| ||| ||||| ||| |||||||||||| |||||||||||||||||||||     |||||| ||||||||| |    
T  2862622 ttgatatatattttattatttgaaaatgttaacttaaataattaatttaatcattattagaaagtgttttcttagtcctcaagttttgctaaaatatttt 2862721  T
Q  147 agaatgcaatctgaaatatttt 168  Q
    |||| |||||||||||||||||    
T  2862722 agaacgcaatctgaaatatttt 2862743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 2881925 - 2882046
Alignment:
Q  52 ttgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgt 146  Q
    |||||||||||||||||||||| ||||| ||| ||||| ||| |||||||||||| |||||||||| ||| ||||||     |||||| ||||||||| |    
T  2881925 ttgatatatattttattatttgaaaatgttaacttaaataattaatttaatcattattagaaagtgcttttttagtcctcaagttttgctaaaatatttt 2882024  T
Q  147 agaatgcaatctgaaatatttt 168  Q
    |||| |||||||||||||||||    
T  2882025 agaacgcaatctgaaatatttt 2882046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 15645678 - 15645560
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaa 150  Q
    |||||||||||| ||||||||||| ||||||||| ||| |||||||||||  ||||| |||||||||||| ||     |||||| ||| ||||| | |||    
T  15645678 tatatattttataatttggaaatgttaaattaaataattaatttaatcatgtttagagagtgttttcttactcccccagttttgctaagatattttggaa 15645579  T
Q  151 tgcaatctgaaatattttg 169  Q
     ||||| ||||||||||||    
T  15645578 cgcaatatgaaatattttg 15645560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 14074143 - 14073994
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctg 159  Q
    ||||||||||||||||||||||||| ||| |||||  ||||| ||| |||||| |||||| |||     |||||| |||| |||| |||||||||||||     
T  14074143 tattatttggaaatgataaattaaataattaatttggtcattattaaaaagtgctttcttggtccccaagttttgctaaattattttagaatgcaatcta 14074044  T
Q  160 aaatattttgagacgcaattt--aaatattttgctgtgcaatctaatata 207  Q
     |||||||||  || |||| |  |||||||||| |  |||||||||||||    
T  14074043 taatattttggaacacaatctaaaaatattttggtaggcaatctaatata 14073994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 26981696 - 26981586
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||     |||||| ||||||||| ||||| |||||||    
T  26981696 tattatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgattttctttgtctccatgttttgctaaaatattttagaacgcaatct 26981597  T
Q  159 gaaatattttg 169  Q
      |||||||||    
T  26981596 agaatattttg 26981586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 27074076 - 27073968
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatctga 160  Q
    ||||||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||     |||||| ||||||||| ||||| |||||||      
T  27074076 ttatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgattttctttgtctccatgttttgctaaaatattttagaacgcaatctag 27073977  T
Q  161 aatattttg 169  Q
    |||||||||    
T  27073976 aatattttg 27073968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 6111860 - 6111923
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||| |||||||||||||||  ||   |||||||||| |||||||||||||||||||||    
T  6111860 tattatttgaaaatgataaattaaatgattgttttaatcattattagaaagtgttttcttagtc 6111923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 18387916 - 18387864
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg 117  Q
    ||||||||||||||||||||||||| | | |||||||||||||| | ||||||    
T  18387916 tattatttggaaatgataaattaaatatttaatttaatcattgtaaaaaagtg 18387864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 49045 - 49125
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  49045 tatattgatatatattttattatttgaaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 49125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 47055 - 47135
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  47055 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 47135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 51999 - 52079
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  51999 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 52079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 34806 - 34886
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  34806 tatattgatatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 34886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 149589 - 149509
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  149589 tatattgatatatattttattatttgaaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 149509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 30659157 - 30659077
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    
T  30659157 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtgctttcttagtc 30659077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 10159797 - 10159877
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||  ||||||||||    
T  10159797 tatattgatatatattttattatttggaaatgataaattaaataattaatttaatcattattagaaagtactttcttagtc 10159877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 6296997 - 6297075
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagt 127  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  6296997 tatattgatatatattttattatttggaaatgataaattaaataattaatttaa-cattattagaaagtgttttcttagt 6297075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 30629853 - 30629774
Alignment:
Q  49 atattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||| ||||||||||| |||||| ||||||||| ||| |||||||||||| |||| ||||||||||||||||    
T  30629853 atattgatatatgttttattatttagaaatgttaaattaaataattaatttaatcattattaggaagtgttttcttagtc 30629774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 28856142 - 28856016
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaata 142  Q
    |||||||||||| ||||||||||||||||||||||||||| | | | |||||||||||| |||||||||| ||| ||||||     |||||| |||||||    
T  28856142 tatattgatatacattttattatttggaaatgataaattagatagttaatttaatcattattagaaagtgcttttttagtccccaagttttgctaaaata 28856043  T
Q  143 ttgtagaatgcaatctgaaatattttg 169  Q
    || | ||| |||||||  |||||||||    
T  28856042 ttttggaacgcaatctagaatattttg 28856016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 22845385 - 22845295
Alignment:
Q  57 atatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagt---cgttttgataaaatatt 144  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||||||  |||||||||| |||||||||   ||||||| |||||||||    
T  22845385 atatattttattatgtggaaatgataaattaaataattaatttaatcatcattagaaagtgctttcttagtccccgttttgctaaaatatt 22845295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 17452591 - 17452655
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttaga 112  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||| |||||    
T  17452591 tatattgatatatatttttttatttggaaatgataaattaaatagttaatttaatcattattaga 17452655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 30619849 - 30619727
Alignment:
Q  50 tattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatatt 144  Q
    ||||||||||| ||||||||||| |||||| |||| |||| ||| |||||||||||| |||| || |||||||||||||      ||||| |||||||||    
T  30619849 tattgatatatgttttattatttagaaatgttaaa-taaataattaatttaatcattattaggaaatgttttcttagtctccaaattttgttaaaatatt 30619751  T
Q  145 gtagaatgcaatctgaaatatttt 168  Q
     | ||| | |||||||||||||||    
T  30619750 ttggaacgtaatctgaaatatttt 30619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 30641218 - 30641286
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagt 116  Q
    |||||||||||||||||||||||||| ||||  ||||| ||| ||| | |||||||||| |||||||||    
T  30641218 tatattgatatatattttattatttgaaaatattaaatgaaataattactttaatcattattagaaagt 30641286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 7495868 - 7495825
Alignment:
Q  207 agagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  7495868 agagcccgtttgttatagtttttttaagaaaaaaatcacttatt 7495825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 7559431 - 7559538
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||||||||  | | |||||||||||| ||| ||||| ||||||| |||     |||||| ||||||||| ||||| |||| || ||    
T  7559431 ttatttggaaatgataaattaattatttaatttaatcattattaaaaagtattttctttgtccccaagttttgctaaaatattttagaacgcaaactaaa 7559530  T
Q  162 atattttg 169  Q
    ||||||||    
T  7559531 atattttg 7559538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 30640110 - 30640228
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctg 159  Q
    |||||||| ||||||  |||||||| ||| ||||||| |||| ||||||||||||||| |||||     |||||| ||||||||| | |||  |||| ||    
T  30640110 tattatttagaaatgtaaaattaaataattaatttaaacattattagaaagtgttttcgtagtccccaagttttgctaaaatattttggaacacaatttg 30640209  T
Q  160 aaatattttgagacgcaat 178  Q
    ||||||||||  |||||||    
T  30640210 aaatattttggtacgcaat 30640228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 25375902 - 25375793
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctg 159  Q
    ||||||||| ||||||||||||||| | | ||||| |||||| ||| |||||||||||||  ||     |||||  ||||||||| |||||||||||||     
T  25375902 tattatttgaaaatgataaattaaatatttaatttgatcattattaaaaagtgttttctttctccccaagttttactaaaatattttagaatgcaatcta 25375803  T
Q  160 aaatattttg 169  Q
     |||||||||    
T  25375802 taatattttg 25375793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 41347146 - 41347190
Alignment:
Q  206 tagagcccgtttgttatagttttttcaaggaaaaaatcacttatt 250  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  41347146 tagagtccgtttgttatagcttttttaaggaaaaaatcacttatt 41347190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 6857311 - 6857204
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||||||||| ||| ||||| |||||| ||| | |||| |||||| |||      ||||| |||| |||| | ||||||||||| ||    
T  6857311 ttatttggaaatgataaattaaataattaatttgatcattattaaagagtgctttcttggtccccaatttttgctaaattatttttgaatgcaatctaaa 6857212  T
Q  162 atattttg 169  Q
    ||||||||    
T  6857211 atattttg 6857204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 24292550 - 24292657
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||| ||||| ||| |||||  ||||| ||| ||||||||||||| |||     |||||| |||| |||| ||||| |||||||  |    
T  24292550 ttatttggaaatgataatttaaataataaatttggtcattattaaaaagtgttttcttggtccccaagttttgctaaattattttagaacgcaatctaga 24292649  T
Q  162 atattttg 169  Q
    ||||||||    
T  24292650 atattttg 24292657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 17328428 - 17328395
Alignment:
Q  56 tatatattttattatttggaaatgataaattaaa 89  Q
    ||||||||||||||||| ||||||||||||||||    
T  17328428 tatatattttattatttagaaatgataaattaaa 17328395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 207
Target Start/End: Original strand, 17452720 - 17452833
Alignment:
Q  100 aatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaaatattttgagacgcaattt-aaatattttgctg 193  Q
    ||||||| ||||||||||||||||| |||     |||||| | ||||||| ||||| |||||||  |||||||||  || |||||| |||||||||| |     
T  17452720 aatcattattagaaagtgttttcttggtccctaagttttgctgaaatattttagaacgcaatctagaatattttggaacacaatttgaaatattttggta 17452819  T
Q  194 tgcaatctaatata 207  Q
     |||||||||||||    
T  17452820 ggcaatctaatata 17452833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 26903222 - 26903165
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctt 124  Q
    ||||||||||||||||||||||| ||| |||||  ||||| ||| |||||| ||||||    
T  26903222 ttatttggaaatgataaattaaataattaatttggtcattattaaaaagtgctttctt 26903165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 8961 - 9041
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  8961 tatattgttatatattttattatatggaaatgataaattaaataattaatttaatcattattagaaagtgttttcttagtc 9041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 343 - 423
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||| |||||||||||||    
T  343 tatattgatatatattttattatttggaaatgataaattaaataattaatttgatcattattagaaaatgttttcttagtc 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 59417 - 59337
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||  |||||||| ||| |||||||||||||||||||||    
T  59417 tatattgatatatattttactatttggaaatgataaattaaataaataatttaattattattagaaagtgttttcttagtc 59337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 63619 - 63539
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||  |||||||| ||| |||||||||||||||||||||    
T  63619 tatattgatatatattttactatttggaaatgataaattaaataaataatttaattattattagaaagtgttttcttagtc 63539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 83913 - 83787
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaata 142  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||| |||||||||||| |||||||||| ||||||| ||      ||||| || ||||    
T  83913 tatattgatatatattgtattatttagaaatgataaattaaataattaatttaatcattattagaaagtgctttcttaatctccaaattttgctagaata 83814  T
Q  143 ttgtagaatgcaatctgaaatattttg 169  Q
    || | ||| ||||||||||||||||||    
T  83813 ttttggaacgcaatctgaaatattttg 83787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 3197 - 3117
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    |||||||||||||||||||||||||||||||  ||||| ||| ||| | |||||||||| ||||||||| ||||| |||||    
T  3197 tatattgatatatattttattatttggaaatattaaatgaaataattactttaatcattattagaaagttttttcatagtc 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 8575 - 8495
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc 128  Q
    ||||||||||||||||||| |||||||||||  ||||| ||| ||| | |||||||||| ||||||||| ||||| |||||    
T  8575 tatattgatatatattttactatttggaaatattaaatgaaataattactttaatcattattagaaagttttttcatagtc 8495  T

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Target: scaffold0211 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 27438 - 27505
Alignment:
Q  58 tatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttctta 125  Q
    ||||||| ||||| |||||||| ||||||||| ||| |||||||||||| | ||||||||||||||||    
T  27438 tatatttgattatatggaaatgttaaattaaataattaatttaatcattatcagaaagtgttttctta 27505  T

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Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 8684 - 8794
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    ||||||||||||||||||||||||| | | ||||||||| || ||| |||||| ||||||| |||     |||||| ||||||||| ||||| |||||||    
T  8684 tattatttggaaatgataaattaaatatttaatttaatccttattaaaaagtgcttttctttgtctccatgttttgctaaaatattttagaacgcaatct 8783  T
Q  159 gaaatattttg 169  Q
     ||||||||||    
T  8784 aaaatattttg 8794  T

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Target: scaffold0357 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 13020 - 13076
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgtttt 121  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||| ||||||||||    
T  13020 tattatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgtttt 13076  T

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Target: scaffold0357; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 3432 - 3542
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||     |||||| ||||||||  ||||| |||||||    
T  3432 tattatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgcttttctttgtctccatgttttgctaaaatatcttagaacgcaatct 3531  T
Q  159 gaaatattttg 169  Q
      |||||||||    
T  3532 agaatattttg 3542  T

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Target: scaffold0132 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 207
Target Start/End: Original strand, 24380 - 24528
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctg 159  Q
    ||||||||||||||||||||||||| | |  ||||||||||| ||| ||||||||||||| |||     |||||| |||| |||| ||||| |||||||     
T  24380 tattatttggaaatgataaattaaatatttgatttaatcattattaaaaagtgttttcttggtccccaggttttgctaaattattttagaacgcaatcta 24479  T
Q  160 aaatattttgagacgcaat-ttaaatattttgctgtgcaatctaatata 207  Q
     |||| ||||  || |||| | |||||||||| |  |||||||||||||    
T  24480 gaatactttggaacacaatctaaaatattttggtaggcaatctaatata 24528  T

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Target: scaffold0628 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 5715 - 5657
Alignment:
Q  63 tttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgtttt 121  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||  |||||||| ||||    
T  5715 tttattatttggaaatgataatttaaagaattaatttaatcattactagaaagtatttt 5657  T

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Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 7423 - 7365
Alignment:
Q  63 tttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgtttt 121  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||  |||||||| ||||    
T  7423 tttattatttggaaatgataatttaaagaattaatttaatcattactagaaagtatttt 7365  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 81674 - 81528
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||||||||  ||| |||||| ||||| ||| |||||| |||||| |||     |||||| |||| |||| ||||| |||||||  |    
T  81674 ttatttggaaatgataaattaattaattaatttagtcattattaaaaagtgctttcttggtccccaagttttgctaaattattttagaacgcaatctaga 81575  T
Q  162 atattttgagacgcaat-ttaaatattttgctgtgcaatctaatata 207  Q
    ||||||||  || |||| | |||||||||| |  |||||||||||||    
T  81574 atattttgtaacacaatctaaaatattttggtaggcaatctaatata 81528  T

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Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 65426 - 65319
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||| ||||||||||||||| ||| |||||| ||||| ||| |||||| |||||| |||     |||||| |||| |||| ||||| |||||||  |    
T  65426 ttatttgaaaatgataaattaaataattaatttagtcattattaaaaagtgctttcttggtccccaagttttgctaaattattttagaacgcaatctaga 65327  T
Q  162 atattttg 169  Q
    ||||||||    
T  65326 atattttg 65319  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 192705 - 192851
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtgttttcttagtc-----gttttgataaaatattgtagaatgcaatctgaa 161  Q
    ||||||||||||||||||||||| ||| |||||  ||||| ||| |||||| |||||| |||     |||||| |||| |||| ||||| |||||||  |    
T  192705 ttatttggaaatgataaattaaataattaatttggtcattattaaaaagtgctttcttggtccccaagttttgctaaattattttagaacgcaatctaga 192804  T
Q  162 atattttgagacgcaat-ttaaatattttgctgtgcaatctaatata 207  Q
    ||||||||  || |||| | |||||||||| |  |||||||||||||    
T  192805 atattttggaacacaatctaaaatattttggtaggcaatctaatata 192851  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 22529 - 22422
Alignment:
Q  67 ttatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatctga 160  Q
    ||||||||||||||||||||||| | | |||||||||||| ||| |||||| ||||||| |||      ||||| ||||||||| ||||| |||||||      
T  22529 ttatttggaaatgataaattaaatatttaatttaatcattattaaaaagtgattttctttgtctccattttttgctaaaatattttagaacgcaatctag 22430  T
Q  161 aatatttt 168  Q
    ||||||||    
T  22429 aatatttt 22422  T

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Target: scaffold1910 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 853 - 743
Alignment:
Q  65 tattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagtg-ttttcttagtc-----gttttgataaaatattgtagaatgcaatct 158  Q
    ||||||||| ||||||||||||||| | | ||||||| |||||||| |||||| ||||||| |||     |||||| ||||||||| ||||| | |||||    
T  853 tattatttgaaaatgataaattaaatatttaatttaaccattgttaaaaagtgcttttctttgtccccatgttttgctaaaatattttagaacgtaatct 754  T
Q  159 gaaatattttg 169  Q
      |||||||||    
T  753 ataatattttg 743  T

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Target: scaffold0720 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 5658 - 5726
Alignment:
Q  48 tatattgatatatattttattatttggaaatgataaattaaacaatcaatttaatcattgttagaaagt 116  Q
    |||||||||||||||| ||||||||| ||||  ||||| ||| ||| | |||||| ||| |||||||||    
T  5658 tatattgatatatattatattatttgaaaatattaaatgaaataattactttaattattattagaaagt 5726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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