View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19589_low_73 (Length: 225)

Name: NF19589_low_73
Description: NF19589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19589_low_73
NF19589_low_73
[»] chr8 (1 HSPs)
chr8 (165-204)||(1234545-1234584)


Alignment Details
Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 1234545 - 1234584
Alignment:
165 ttgcgcgaaacacgttgagaaaatgatttgcagagagaat 204  Q
    ||||||||||||||||||||||||||||| ||||||||||    
1234545 ttgcgcgaaacacgttgagaaaatgatttacagagagaat 1234584  T

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