View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19590_high_24 (Length: 264)
Name: NF19590_high_24
Description: NF19590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19590_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 502086 - 502330
Alignment:
| Q |
3 |
tcagtttcagatcacatgaatggatttcaatatcaaaccgagaaattcgatagctatgtgattgacatggatcccgccttctcttcaggcatcaacaaag |
102 |
Q |
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| T |
502086 |
tcagtttcagatcacatgaatggatttcaatatccaaccgagaaattcgatagctatgtgattgacatggatgccgccttctcttcaggcatcaacaaag |
502185 |
T |
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| Q |
103 |
atagtagtgccaatgctaatcctagaattacggtgtgactctcttttttcttctttaatatttcactacaagactttaattaatattccacatttgggct |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
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| T |
502186 |
atagtagtgccaatgctaatcctagaattacggtgtgactctcttttttcttctttaatatttcactactagac-ttaattaatattccacatttgggct |
502284 |
T |
|
| Q |
203 |
aagaactttttatcttcagaatcctaaaaccacaattagcactaat |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
502285 |
aagaactttttatcttcagaatcctaaaaccacaattagcactaat |
502330 |
T |
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