View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19590_high_33 (Length: 236)
Name: NF19590_high_33
Description: NF19590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19590_high_33 |
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Alignment Details
Target: chr1 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 34182455 - 34182605
Alignment:
| Q |
71 |
gacaatgatagaaaataacaaaaaatgttataagttcgtgggagaataaccattatcaaatagttatactagcatatctataatcatgttagtggaaaag |
170 |
Q |
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| T |
34182455 |
gacaatgagagaaaataacaaaaaatgttataaattcgtgggagaataaccattatcaaatagttatactagcatatctataatcatgtgagtggaaaag |
34182554 |
T |
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| Q |
171 |
gttttacctagatataaaacaccaaattaaaaagagtcataagtttaattt |
221 |
Q |
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| T |
34182555 |
gttttacctagatataaaacaccaaattaaaaagagtcataagtttaattt |
34182605 |
T |
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