View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19590_low_13 (Length: 349)
Name: NF19590_low_13
Description: NF19590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19590_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 121 - 292
Target Start/End: Original strand, 32009387 - 32009558
Alignment:
| Q |
121 |
ggctgcttggaggcgtttcattacgcaccatctcacttcttcaatccatcaagctcgaatgcaggtcactcactacttcaatacannnnnnnnnnnnnnn |
220 |
Q |
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| T |
32009387 |
ggctgcttggaagcgtttcattacgcaccacctcacttcttcaatccatcaagctcgaatgcaggtcactcactacttcaatacattttcttttcttttt |
32009486 |
T |
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| Q |
221 |
nnnnnnnngaatttgatcatccaataagagttagtgacttggtattacaatttctttcatcaacgaccatgt |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32009487 |
tctttcttgaatttgatcatccaataagagttagtgacttggtattacaatttctttcatcaacgaccatgt |
32009558 |
T |
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