View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19590_low_3 (Length: 584)

Name: NF19590_low_3
Description: NF19590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19590_low_3
NF19590_low_3
[»] chr8 (31 HSPs)
chr8 (158-566)||(3417355-3417763)
chr8 (12-112)||(3417182-3417282)
chr8 (179-271)||(39205494-39205586)
chr8 (158-226)||(38576288-38576356)
chr8 (387-506)||(39205724-39205843)
chr8 (158-212)||(37732824-37732878)
chr8 (163-216)||(27441469-27441522)
chr8 (163-212)||(32414524-32414573)
chr8 (159-208)||(37064815-37064864)
chr8 (158-214)||(9197818-9197874)
chr8 (158-214)||(11686962-11687018)
chr8 (158-226)||(26654364-26654432)
chr8 (158-214)||(31602014-31602070)
chr8 (158-226)||(41974638-41974706)
chr8 (158-213)||(15198289-15198344)
chr8 (158-216)||(3043240-3043298)
chr8 (162-212)||(8372915-8372965)
chr8 (158-208)||(9197093-9197143)
chr8 (158-208)||(26652291-26652341)
chr8 (158-214)||(3043963-3044019)
chr8 (158-214)||(8373691-8373747)
chr8 (162-226)||(17725640-17725704)
chr8 (158-226)||(22320372-22320440)
chr8 (158-214)||(31641509-31641565)
chr8 (158-214)||(31642085-31642141)
chr8 (158-209)||(3165125-3165176)
chr8 (162-208)||(17724767-17724813)
chr8 (158-208)||(27442145-27442195)
chr8 (158-208)||(32979828-32979878)
chr8 (158-208)||(39778916-39778966)
chr8 (158-208)||(39779845-39779895)
[»] chr5 (30 HSPs)
chr5 (158-566)||(4084877-4085285)
chr5 (163-216)||(1554079-1554132)
chr5 (158-214)||(19128767-19128823)
chr5 (158-214)||(19360474-19360530)
chr5 (158-214)||(234698-234754)
chr5 (158-214)||(237819-237875)
chr5 (162-222)||(6476781-6476841)
chr5 (158-214)||(19359701-19359757)
chr5 (158-209)||(29046026-29046077)
chr5 (158-208)||(13306273-13306323)
chr5 (159-213)||(22799759-22799813)
chr5 (163-216)||(7632097-7632150)
chr5 (170-222)||(10554556-10554608)
chr5 (158-214)||(17071221-17071277)
chr5 (158-214)||(28705877-28705933)
chr5 (161-209)||(34709040-34709088)
chr5 (171-245)||(1281846-1281921)
chr5 (158-209)||(29087922-29087973)
chr5 (163-214)||(33471087-33471138)
chr5 (163-214)||(34600263-34600314)
chr5 (170-212)||(1283500-1283542)
chr5 (158-208)||(17071798-17071848)
chr5 (162-216)||(27364483-27364537)
chr5 (158-236)||(28705162-28705240)
chr5 (158-236)||(33005518-33005596)
chr5 (158-191)||(31081996-31082029)
chr5 (158-214)||(235589-235645)
chr5 (158-214)||(236927-236983)
chr5 (158-222)||(25858207-25858271)
chr5 (163-207)||(38056796-38056840)
[»] chr1 (32 HSPs)
chr1 (198-541)||(33504113-33504459)
chr1 (158-222)||(13262830-13262894)
chr1 (158-214)||(25469085-25469141)
chr1 (158-226)||(28182059-28182127)
chr1 (158-214)||(30663975-30664031)
chr1 (163-214)||(28181535-28181586)
chr1 (159-208)||(37852521-37852570)
chr1 (158-230)||(4135527-4135599)
chr1 (158-214)||(7406242-7406298)
chr1 (158-226)||(49680808-49680876)
chr1 (158-213)||(50271783-50271838)
chr1 (163-209)||(4439210-4439256)
chr1 (158-216)||(8987787-8987845)
chr1 (158-216)||(25671167-25671225)
chr1 (162-236)||(34309207-34309281)
chr1 (374-447)||(22420180-22420253)
chr1 (158-231)||(32038474-32038547)
chr1 (158-214)||(13263515-13263571)
chr1 (163-207)||(17171933-17171977)
chr1 (158-214)||(30663355-30663411)
chr1 (162-226)||(49681660-49681724)
chr1 (158-244)||(9778940-9779027)
chr1 (171-226)||(30931898-30931953)
chr1 (159-226)||(36389773-36389840)
chr1 (163-209)||(4433851-4433897)
chr1 (158-196)||(12760773-12760811)
chr1 (158-208)||(19172580-19172630)
chr1 (158-208)||(36390372-36390422)
chr1 (163-216)||(169624-169677)
chr1 (158-214)||(10121551-10121607)
chr1 (158-222)||(19171775-19171839)
chr1 (158-214)||(25468507-25468563)
[»] chr6 (19 HSPs)
chr6 (211-355)||(12345885-12346029)
chr6 (457-566)||(12345781-12345890)
chr6 (162-236)||(19323743-19323817)
chr6 (158-236)||(19653967-19654045)
chr6 (162-214)||(2512439-2512491)
chr6 (158-214)||(10171273-10171329)
chr6 (158-214)||(26529511-26529567)
chr6 (158-213)||(33435337-33435392)
chr6 (158-208)||(8489284-8489334)
chr6 (159-212)||(33436274-33436327)
chr6 (158-214)||(10171964-10172020)
chr6 (159-211)||(19311828-19311880)
chr6 (170-226)||(19322992-19323048)
chr6 (158-214)||(21133225-21133281)
chr6 (158-214)||(26528820-26528876)
chr6 (158-221)||(18227729-18227791)
chr6 (158-216)||(505534-505592)
chr6 (158-214)||(3623172-3623228)
chr6 (158-214)||(8488466-8488522)
[»] chr2 (30 HSPs)
chr2 (158-312)||(29559320-29559474)
chr2 (158-223)||(1296377-1296442)
chr2 (158-223)||(9276319-9276384)
chr2 (163-231)||(15774205-15774273)
chr2 (162-216)||(9540333-9540387)
chr2 (163-216)||(22301866-22301919)
chr2 (158-226)||(1297109-1297177)
chr2 (158-226)||(9275584-9275652)
chr2 (162-222)||(24933838-24933898)
chr2 (164-216)||(26752719-26752771)
chr2 (162-222)||(29719448-29719508)
chr2 (158-209)||(29512369-29512420)
chr2 (158-212)||(33512095-33512149)
chr2 (170-223)||(38361077-38361130)
chr2 (158-214)||(18174668-18174724)
chr2 (158-214)||(22560566-22560622)
chr2 (163-207)||(27177915-27177959)
chr2 (158-226)||(36237629-36237697)
chr2 (158-212)||(8541749-8541803)
chr2 (158-208)||(11751073-11751123)
chr2 (158-208)||(18174097-18174147)
chr2 (158-208)||(22301192-22301242)
chr2 (159-209)||(23343778-23343828)
chr2 (158-208)||(23857028-23857078)
chr2 (167-216)||(11007238-11007287)
chr2 (171-212)||(16692974-16693015)
chr2 (158-214)||(11750255-11750311)
chr2 (158-222)||(12725605-12725669)
chr2 (158-222)||(18820430-18820494)
chr2 (158-214)||(19918720-19918776)
[»] chr7 (42 HSPs)
chr7 (12-104)||(18829576-18829668)
chr7 (158-315)||(16664023-16664180)
chr7 (158-315)||(17638383-17638540)
chr7 (12-85)||(44472350-44472423)
chr7 (202-435)||(22319973-22320201)
chr7 (272-435)||(3163686-3163845)
chr7 (12-85)||(22022449-22022522)
chr7 (163-216)||(1417610-1417663)
chr7 (158-223)||(25343229-25343294)
chr7 (163-216)||(38225972-38226025)
chr7 (158-226)||(25342494-25342562)
chr7 (158-226)||(25343300-25343368)
chr7 (159-222)||(7668480-7668543)
chr7 (158-217)||(46428184-46428243)
chr7 (158-236)||(26636100-26636178)
chr7 (158-207)||(36378809-36378858)
chr7 (158-214)||(27948443-27948499)
chr7 (158-226)||(30660590-30660658)
chr7 (158-226)||(37950454-37950522)
chr7 (158-214)||(45099892-45099948)
chr7 (203-278)||(3163585-3163660)
chr7 (158-209)||(25599019-25599070)
chr7 (158-209)||(46428821-46428872)
chr7 (162-212)||(13785594-13785644)
chr7 (162-236)||(30661432-30661506)
chr7 (162-236)||(37949606-37949680)
chr7 (163-208)||(3029203-3029248)
chr7 (158-223)||(3772516-3772581)
chr7 (161-214)||(21496982-21497035)
chr7 (158-207)||(23889812-23889861)
chr7 (159-223)||(18977759-18977823)
chr7 (163-235)||(24389594-24389666)
chr7 (158-214)||(40273557-40273613)
chr7 (159-214)||(26636859-26636914)
chr7 (171-245)||(47719671-47719746)
chr7 (162-236)||(19067638-19067712)
chr7 (174-219)||(3027987-3028032)
chr7 (184-217)||(5930525-5930558)
chr7 (171-212)||(23901095-23901136)
chr7 (165-210)||(43065119-43065164)
chr7 (159-208)||(45099136-45099185)
chr7 (162-226)||(3688385-3688449)
[»] chr4 (33 HSPs)
chr4 (12-85)||(6507976-6508049)
chr4 (161-302)||(7842440-7842581)
chr4 (158-236)||(8247694-8247772)
chr4 (158-217)||(47785795-47785854)
chr4 (163-220)||(142517-142574)
chr4 (158-226)||(8248507-8248575)
chr4 (164-236)||(8265365-8265437)
chr4 (158-226)||(8266172-8266240)
chr4 (158-222)||(24374787-24374851)
chr4 (162-222)||(19080387-19080447)
chr4 (158-214)||(26147031-26147087)
chr4 (163-214)||(11938714-11938765)
chr4 (158-208)||(598523-598573)
chr4 (163-209)||(599305-599351)
chr4 (158-216)||(31329714-31329772)
chr4 (158-226)||(7841791-7841857)
chr4 (158-215)||(9365167-9365224)
chr4 (158-214)||(20774179-20774235)
chr4 (158-214)||(24158819-24158875)
chr4 (158-214)||(30573708-30573764)
chr4 (158-206)||(40495093-40495141)
chr4 (158-214)||(47688478-47688534)
chr4 (162-214)||(56262480-56262532)
chr4 (163-217)||(1866346-1866400)
chr4 (158-208)||(44792641-44792691)
chr4 (158-208)||(47687907-47687957)
chr4 (170-212)||(55976176-55976218)
chr4 (159-208)||(44469491-44469540)
chr4 (165-214)||(55001439-55001488)
chr4 (173-245)||(55976922-55976995)
chr4 (158-222)||(1465318-1465382)
chr4 (183-223)||(16902903-16902943)
chr4 (170-214)||(16903642-16903686)
[»] chr3 (38 HSPs)
chr3 (158-226)||(45081390-45081458)
chr3 (158-214)||(48648201-48648257)
chr3 (158-209)||(14871151-14871202)
chr3 (158-216)||(13477055-13477113)
chr3 (160-226)||(37520548-37520614)
chr3 (158-214)||(20213530-20213586)
chr3 (158-226)||(46150716-46150784)
chr3 (158-209)||(37988222-37988273)
chr3 (159-214)||(51827493-51827548)
chr3 (158-196)||(10847289-10847327)
chr3 (158-208)||(20212978-20213028)
chr3 (162-212)||(21727530-21727580)
chr3 (163-220)||(8949938-8949995)
chr3 (163-212)||(17603171-17603220)
chr3 (158-223)||(52266443-52266508)
chr3 (170-214)||(981677-981721)
chr3 (158-214)||(27082774-27082830)
chr3 (163-223)||(31974654-31974714)
chr3 (162-214)||(48507031-48507083)
chr3 (158-214)||(48764475-48764531)
chr3 (163-214)||(13349418-13349469)
chr3 (171-214)||(13477777-13477820)
chr3 (159-214)||(48765069-48765124)
chr3 (159-209)||(265102-265152)
chr3 (172-245)||(17603928-17604002)
chr3 (180-230)||(23706786-23706836)
chr3 (180-230)||(23725242-23725292)
chr3 (180-230)||(23743698-23743748)
chr3 (158-208)||(33276890-33276940)
chr3 (158-208)||(33277509-33277559)
chr3 (158-196)||(44029786-44029824)
chr3 (158-208)||(48413317-48413367)
chr3 (160-214)||(48649172-48649226)
chr3 (165-214)||(48506443-48506491)
chr3 (158-215)||(52281764-52281821)
chr3 (158-195)||(52605501-52605538)
chr3 (163-208)||(54458670-54458715)
chr3 (158-214)||(41458031-41458087)
[»] scaffold0176 (1 HSPs)
scaffold0176 (158-221)||(26589-26652)
[»] scaffold0085 (3 HSPs)
scaffold0085 (171-223)||(15848-15900)
scaffold0085 (158-214)||(15020-15076)
scaffold0085 (159-214)||(15080-15135)
[»] scaffold0002 (1 HSPs)
scaffold0002 (158-214)||(428900-428956)
[»] scaffold1207 (1 HSPs)
scaffold1207 (162-208)||(1588-1634)
[»] scaffold0418 (1 HSPs)
scaffold0418 (158-206)||(6891-6939)
[»] scaffold0504 (1 HSPs)
scaffold0504 (158-207)||(5385-5434)


Alignment Details
Target: chr8 (Bit Score: 385; Significance: 0; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 158 - 566
Target Start/End: Original strand, 3417355 - 3417763
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccg 257  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3417355 gagtcaggatctgttgacatctggtgttaacgaattcgttgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccg 3417454  T
Q  258 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatttgacgttcttcttcacaccaacccaacagtatatttgtttcg 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3417455 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatttgacgttcttcttcacaccaacccaacagtatatttgtttcg 3417554  T
Q  358 atcgcagctcgtcaccaagatatttcttatttatgtcaaatttattaaattgatcgcaataggagtatgatagtgaatttggagatattttggatgagtt 457  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  3417555 atcgcagctcctcaccaagatatttcttatttatgtcaaatttattaaattgatcgcaataggagtataatagtgaatttggagatattttggaagagtt 3417654  T
Q  458 tgttttttacggtggaatttcatgagtgcaaatggagtttctaaaatgtcggtttgatgcgttattgaaattgcatgatttgaaaatgttgacgaagggt 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3417655 tgttttttacggtggaatttcatgagtgcaaatggagtttctaaaatgtcggtttgatgcgttattgaaattgcatgatttgaaaatgttgacgaagggt 3417754  T
Q  558 gcaaggtat 566  Q
    |||||||||    
T  3417755 gcaaggtat 3417763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 3417182 - 3417282
Alignment:
Q  12 aagaatatgaaagaaaaataatcaaatgataacctgtggacatccaaggctgaataatataaaaagacttgctacatacaaaagccattactcacaatta 111  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3417182 aagaaaatgaaagaaaaataatcaaatgataacctgtggacatccaaggctgaataatataaaaagacttgctacatacaaaagccattactcacaatta 3417281  T
Q  112 c 112  Q
    |    
T  3417282 c 3417282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 39205494 - 39205586
Alignment:
Q  179 tggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaatt 271  Q
    |||||||||||||| ||| |||| ||||||| ||||||| |||||||| ||| ||||||||||||||| | |||||||||||||| |||||||    
T  39205494 tggtgtcaacgaatccgttgacatcaaatctcaaccatctattttatttaatcaaaggtctataatcgcttgttcaccgaataaacttaaatt 39205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 38576356 - 38576288
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  38576356 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 38576288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 506
Target Start/End: Original strand, 39205724 - 39205843
Alignment:
Q  387 tttatgtcaaatttattaaattgatcgcaataggagtatgatagtgaatttggagatattttggatgagtttgttttttacggtggaatttcatgagtgc 486  Q
    |||||||||||||||||||| |||| |||||| ||| | | || |||| |||| ||||||||||| | |||||| | | |||||||| ||| | |||||     
T  39205724 tttatgtcaaatttattaaagtgattgcaatatgagcacggtaatgaacttggggatattttggaagggtttgtctctaacggtggacttttaggagtga 39205823  T
Q  487 aaatggagtttctaaaatgt 506  Q
    |||| |||||| ||||||||    
T  39205824 aaatcgagtttataaaatgt 39205843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 37732824 - 37732878
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||| |||||    
T  37732824 gagtcaggatccgttgacacctggtgtcaacggattcgttgacaccaaaacttaa 37732878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 27441469 - 27441522
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  27441469 aggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatcttaaccat 27441522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 32414573 - 32414524
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  32414573 aggatctgttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 32414524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 37064815 - 37064864
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  37064815 agtcaggatctgttgacaccaggtgtcaacgaattcattgacaccaaatc 37064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 9197874 - 9197818
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| |||||||||  |||||||||||||||| ||||||||||| |||||    
T  9197874 gagtcaggatccgttgacaccaagtgtcaacgaattcgttgacaccaaatcctaacc 9197818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 11687018 - 11686962
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||| |||||| ||||    
T  11687018 gagttaggatccgttgacacctggtgtcaacgaattcgttgacactaaatctcaacc 11686962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 26654432 - 26654364
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||||| |||| ||||||||| |||||||| | |||||| ||||||||||||||||| || ||||||||    
T  26654432 gagtcaagatccgttgacaccaggtgtcaatggattcgttgacaccaaatcttaaccgtctattttatt 26654364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 31602014 - 31602070
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  31602014 gagttaggatcggttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 31602070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 41974638 - 41974706
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| | |||| |||| ||||    
T  41974638 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcagccattcattatatt 41974706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 15198344 - 15198289
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaac 213  Q
    |||||||||||  ||||||||||||||||||||||| || |||||||||| |||||    
T  15198344 gagtcaggatcctttgacacctggtgtcaacgaatttgttgacaccaaattttaac 15198289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 3043240 - 3043298
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||| |||||| ||||||||||||||||||| ||||| | ||||||||||| |||||||    
T  3043240 gagttaggatccgttgacacctggtgtcaacaaattcattgacaccaaatcctaaccat 3043298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 8372915 - 8372965
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||| ||||    
T  8372915 caggatccgttgacacctggtgtcaacggattcgttgacaccaaatattaa 8372965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 9197093 - 9197143
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||| ||| ||||||||| ||||||||||||||||| |||||||||||    
T  9197093 gagtcagaatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 9197143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 26652291 - 26652341
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||||||| ||||||||| |||||||||||||||||  ||||||||||    
T  26652291 gagtcaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 26652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 3044019 - 3043963
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| || |||||| ||||||||||||||||| |||||||||| ||||||    
T  3044019 gagttaggatccgtcgacaccaggtgtcaacgaattcgttgacaccaaatgttaacc 3043963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 8373747 - 8373691
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| |||||||||  ||||||||| |||||| |||||||||| ||||||    
T  8373747 gagtcaggatccgttgacaccaagtgtcaacggattcgttgacaccaaatattaacc 8373691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 17725704 - 17725640
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||| ||||||| | ||||||||||||||||| ||||||||||| || ||||  ||||||||    
T  17725704 caggatccgttgacagcaggtgtcaacgaattcgttgacaccaaatcctatccatttattttatt 17725640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 22320372 - 22320440
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||||| |||||  || |||||||||| |||||| ||||||||||||||| | || ||||||||    
T  22320372 gagtcaggatccgttgatgccaggtgtcaacggattcgttgacaccaaatcttaatcgtctattttatt 22320440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 31641509 - 31641565
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||||  |||||||| |||||||| | |||||| |||||||||||||||||    
T  31641509 gagtcaggatccattgacaccaggtgtcaatggattcgttgacaccaaatcttaacc 31641565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 31642141 - 31642085
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||||  |||||||| | ||||||||||||||| |||||||||||| ||||    
T  31642141 gagtcaggatccattgacaccagatgtcaacgaattcgttgacaccaaatctcaacc 31642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 3165176 - 3165125
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    ||||||||||| ||||||| | |||||||||| |||||| ||||||||||||    
T  3165176 gagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatct 3165125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 17724767 - 17724813
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||| |||||||||||||||||||  |||||| |||||||||||    
T  17724767 caggatcagttgacacctggtgtcaacagattcgttgacaccaaatc 17724813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 27442195 - 27442145
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||||||| ||||||||| ||||||||||||| |||  ||||||||||    
T  27442195 gagtcaggatccgttgacaccaggtgtcaacgaatccgttaacaccaaatc 27442145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 32979878 - 32979828
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||||||| ||||||||| |||||||||||||| ||  ||||||||||    
T  32979878 gagtcaggatccgttgacaccaggtgtcaacgaatttgttaacaccaaatc 32979828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 39778916 - 39778966
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||||||||  |||||||| |||||||||||||||||  ||||||||||    
T  39778916 gagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 39778966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 39779895 - 39779845
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||||||||  |||||||| |||||||||||||||||  ||||||||||    
T  39779895 gagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 39779845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 365; Significance: 0; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 158 - 566
Target Start/End: Original strand, 4084877 - 4085285
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccg 257  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  4084877 gagtcaggatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaaccattcattttattcaattaaaggtctataatcgctggttcaccg 4084976  T
Q  258 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatttgacgttcttcttcacaccaacccaacagtatatttgtttcg 357  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  4084977 aataaaattaaattgaaaacacagtattattgtactatttcttttcttctgcaaaatttgacgttcttcctcacaccaacccaacagtatacttgtttcg 4085076  T
Q  358 atcgcagctcgtcaccaagatatttcttatttatgtcaaatttattaaattgatcgcaataggagtatgatagtgaatttggagatattttggatgagtt 457  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4085077 atcgcagctcctcaccaagatatttcttatttatgtcaaatttattaaattgatcgcaataggagtatgatagtgaatttggagatattttggatgagtt 4085176  T
Q  458 tgttttttacggtggaatttcatgagtgcaaatggagtttctaaaatgtcggtttgatgcgttattgaaattgcatgatttgaaaatgttgacgaagggt 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4085177 tgttttttacggtggaatttcatgagtgcaaatggagtttctaaaatgtcggtttgatgcgttattgaaattgcatgatttgaaaattttgacgaagggt 4085276  T
Q  558 gcaaggtat 566  Q
    |||||||||    
T  4085277 gcaaggtat 4085285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 1554132 - 1554079
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  1554132 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaaccat 1554079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 19128767 - 19128823
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||    
T  19128767 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaacc 19128823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 19360530 - 19360474
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  19360530 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatattaacc 19360474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 234698 - 234754
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||||    
T  234698 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatattaacc 234754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 237875 - 237819
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||||    
T  237875 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatattaacc 237819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 6476841 - 6476781
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||| |||||    
T  6476841 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccattcattt 6476781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 19359701 - 19359757
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||||    
T  19359701 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatattaacc 19359757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 29046026 - 29046077
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    ||||||||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  29046026 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 29046077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 13306323 - 13306273
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  13306323 gagtcaggatccgttgacacctgatgtcaacgaattcgttgacatcaaatc 13306273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 22799813 - 22799759
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaac 213  Q
    |||||| ||| ||||||||| |||||||| |||||||| ||||||||||||||||    
T  22799813 agtcagaatccgttgacaccaggtgtcaatgaattcgttgacaccaaatcttaac 22799759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 7632097 - 7632150
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||||| ||||||||| |||||||||| |||||| |||||||||||||| ||||    
T  7632097 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttatccat 7632150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 10554556 - 10554608
Alignment:
Q  170 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||||||| |||||||||| |||||| |||||||||||| |||||| |||||    
T  10554556 gttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccattcattt 10554608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 17071221 - 17071277
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||| | ||||||||||||||||| |||||||||||| ||||    
T  17071221 gagttaggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 17071277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 28705933 - 28705877
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| ||||| |||||| ||||    
T  28705933 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacactaaatctcaacc 28705877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 34709088 - 34709040
Alignment:
Q  161 tcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    |||||||||||||||||| |||||||||| |||||| | ||||||||||    
T  34709088 tcaggatctgttgacaccaggtgtcaacggattcgttggcaccaaatct 34709040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 1281846 - 1281921
Alignment:
Q  171 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat-taaaggtctataatc 245  Q
    |||||||| |||||||||| |||||| ||||||||||||||| | | ||||| ||| ||| |||||||| ||||||    
T  1281846 ttgacaccaggtgtcaacggattcgttgacaccaaatcttaaacgttcatttaatttaatctaaaggtcaataatc 1281921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 29087922 - 29087973
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    ||||||||||| ||||||||| |||||||||| |||| | ||||||||||||    
T  29087922 gagtcaggatccgttgacaccaggtgtcaacggattcattgacaccaaatct 29087973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 33471138 - 33471087
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||||||||  |||||||||||||||| |||| ||||||| ||||    
T  33471138 aggatctgttgacaccacgtgtcaacgaattcgttgacaacaaatctcaacc 33471087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 34600263 - 34600314
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||| ||||||| | ||||||||||||||||| |||||||||||| ||||    
T  34600263 aggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 34600314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 1283542 - 1283500
Alignment:
Q  170 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    ||||||||| |||||||||| |||||| |||||||||||||||    
T  1283542 gttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 1283500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 17071848 - 17071798
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||| |||||| ||||||||| ||||| ||||||||||| |||||||||||    
T  17071848 gagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 17071798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 27364537 - 27364483
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    ||||||| ||||||||| |||||||| | |||||| |||||||||||| ||||||    
T  27364537 caggatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaaccat 27364483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 28705162 - 28705240
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||||| ||| ||||||||| |||||||||| ||||||  ||||||||||| |||||  |||| |||| ||| |||||    
T  28705162 gagtcagtatccgttgacaccaggtgtcaacggattcgtttacaccaaatctcaaccagacattatatttaatcaaagg 28705240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 33005518 - 33005596
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    |||||| |||| |||||||||  ||||||| |||||||| ||||| ||||||||||| |  |||||||| ||| |||||    
T  33005518 gagtcatgatccgttgacaccaagtgtcaatgaattcgttgacacaaaatcttaaccgttgattttatttaatcaaagg 33005596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 31081996 - 31082029
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaa 191  Q
    ||||||||||| ||||||||||||||||||||||    
T  31081996 gagtcaggatccgttgacacctggtgtcaacgaa 31082029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 235589 - 235645
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| ||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  235589 gagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 235645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 236983 - 236927
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| ||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  236983 gagttaggatccattgacaccaggtgtcaacggattcgtagacaccaaatctcaacc 236927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 25858207 - 25858271
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||| ||||| ||||||||  |||||||||| |||||| ||||||||||| ||| | |||||||    
T  25858207 gagtcgggatccgttgacactaggtgtcaacggattcgttgacaccaaatcataatcttccattt 25858271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 38056796 - 38056840
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 207  Q
    |||||||||||||||| |||||||||| ||| || ||||||||||    
T  38056796 aggatctgttgacaccaggtgtcaacggattggttgacaccaaat 38056840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 181; Significance: 2e-97; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 198 - 541
Target Start/End: Original strand, 33504113 - 33504459
Alignment:
Q  198 gacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaattgaaaacaaagcattattgtactattt 297  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| ||| || ||||||||||| |||    
T  33504113 gacaccaaatctcaaccatccattttattcaatcaaaggtctataatcgtttgttcatcgaataaacttaaattgaacacacagtattattgtactcttt 33504212  T
Q  298 cttttcttctgcaaaatttgacgttcttcttcacaccaacccaacagtatatttgtttcgatcgcagctcgtcaccaagatatttcttatttatgtcaaa 397  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| |||| |||||| ||||||| ||| |||  |||||||||| |||||||||||||    
T  33504213 cttttcttctgcaaaatttgacactcttcctcacaccaacccaacaatatacttgtttggatcgcaactcctcatgaagatatttcctatttatgtcaaa 33504312  T
Q  398 tttattaaattgatcgcaataggagtatgatagtgaatttggagatattttggatgagtttgttttttacggtggaatttcatgagtgcaaatggagttt 497  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||||| |  ||||||| | || ||||||||| | |||||||||| ||||||    
T  33504313 tttattaaattgatcgcaataggagtatggtagtgaatttagggatattttggaaggctttgtttctaaccgtggaattttaggagtgcaaatcgagttt 33504412  T
Q  498 ctaaaatgtc---ggtttgatgcgttattgaaattgcatgatttgaa 541  Q
    ||||||| |    |||||||||| ||||   ||||||||||||||||    
T  33504413 ctaaaattttcttggtttgatgccttatctgaattgcatgatttgaa 33504459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 13262830 - 13262894
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||| |||| |||||||    
T  13262830 gagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccctccattt 13262894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 25469141 - 25469085
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||    
T  25469141 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaacc 25469085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 28182127 - 28182059
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||||||||||||| |||||||||| |||| | ||||||||||||||||| || ||||||||    
T  28182127 gagtgaggatctgttgacaccaggtgtcaacggattctttgacaccaaatcttaaccgtctattttatt 28182059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 30664031 - 30663975
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| |||||||||||||||||||| |||||| |||||||||||| ||||    
T  30664031 gagtcaggatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaacc 30663975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 28181535 - 28181586
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  28181535 aggatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaacc 28181586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 37852521 - 37852570
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  37852521 agtcaggatccgttgacacctggtgtcaacgaattcgttaacaccaaatc 37852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 4135599 - 4135527
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat 230  Q
    |||| |||||| |||| || | |||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  4135599 gagttaggatccgttggcatcaggtgtcaacatattcgttgacaccaaatcttaaccatcaattttattcaat 4135527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 7406242 - 7406298
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| ||||| ||||||||||| |||||||||||| ||||    
T  7406242 gagtcaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatctcaacc 7406298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 49680808 - 49680876
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| | ||||| ||||||||    
T  49680808 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcatccatcaattttatt 49680876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 50271838 - 50271783
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaac 213  Q
    ||||||||||| ||||||||| ||| |||| |||||||| ||||||||||||||||    
T  50271838 gagtcaggatccgttgacaccaggtatcaatgaattcgttgacaccaaatcttaac 50271783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 4439256 - 4439210
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||||    
T  4439256 aggatccgttgacacctggtgtcaacggattcgttgacaccaaatct 4439210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 8987787 - 8987845
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    ||||||||||| ||||||| | |||||||||| |||||| |||||||||||| ||||||    
T  8987787 gagtcaggatcggttgacatcaggtgtcaacggattcgttgacaccaaatctcaaccat 8987845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 25671167 - 25671225
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    ||||||||||| ||||||||||||||| |||| ||||||  |||||||||| |||||||    
T  25671167 gagtcaggatccgttgacacctggtgttaacggattcgttaacaccaaatcctaaccat 25671225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 34309281 - 34309207
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| |||| |  |||||||| ||| |||||    
T  34309281 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttatttaatcaaagg 34309207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 374 - 447
Target Start/End: Complemental strand, 22420253 - 22420180
Alignment:
Q  374 aagatatttcttatttatgtcaaatttattaaattgatcgcaataggagtatgatagtgaatttggagatattt 447  Q
    |||| ||||||| |||||||||||||||| ||||||||| |||| |||||| | | |||||||| | |||||||    
T  22420253 aagacatttcttgtttatgtcaaatttataaaattgatctcaattggagtaagtttgtgaatttagggatattt 22420180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 32038474 - 32038547
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaatt 231  Q
    |||| |||||| ||||| ||| ||||||||||||||||| |||||||||||| |||| || | |||||| ||||    
T  32038474 gagttaggatcggttgataccaggtgtcaacgaattcgttgacaccaaatctcaaccgtctaatttatttaatt 32038547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 13263571 - 13263515
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||| | |||||| |||||||||||| ||||    
T  13263571 gagtcaggatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaacc 13263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 17171933 - 17171977
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 207  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||    
T  17171933 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 17171977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 30663355 - 30663411
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| ||| |||||| |||||| |||||||||||| ||||    
T  30663355 gagtcaggatccgttgacaccaggtatcaacggattcgttgacaccaaatctcaacc 30663411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 49681724 - 49681660
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||| ||||||||| | | ||||||||| ||| |||||||||||| ||||||| ||||||||    
T  49681724 caggatccgttgacaccagatatcaacgaatccgttgacaccaaatctcaaccatcgattttatt 49681660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 9779027 - 9778940
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat-taaaggtctataat 244  Q
    ||||||||||| |||||||||||||||||||| ||   | ||||||||||||  |||||| ||||| || |||  |||||||||||||    
T  9779027 gagtcaggatccgttgacacctggtgtcaacggatagtttgacaccaaatctccaccatctattttttttaatccaaaggtctataat 9778940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 30931898 - 30931953
Alignment:
Q  171 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||||||| |||||||||| ||||||  ||||||||||||||||||| | ||||||    
T  30931898 ttgacaccaggtgtcaacggattcgttaacaccaaatcttaaccatctaatttatt 30931953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 36389773 - 36389840
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||||||||| |||||||||||||||||||| ||| |  ||||||||||||  ||| || ||||||||    
T  36389773 agtcaggatccgttgacacctggtgtcaacggatttgctgacaccaaatctcgaccgtctattttatt 36389840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 4433897 - 4433851
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    |||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  4433897 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 4433851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 12760773 - 12760811
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgt 196  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  12760773 gagttaggatccgttgacacctggtgtcaacgaattcgt 12760811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 19172630 - 19172580
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||||||||  |||||||| |||||||||| |||||| |||||||||||    
T  19172630 gagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 19172580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 36390422 - 36390372
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||| |||||| ||||||||| ||||||||||||| ||| |||||||||||    
T  36390422 gagttaggatccgttgacaccaggtgtcaacgaatccgttgacaccaaatc 36390372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 169677 - 169624
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||||| ||||||||| ||||||||||||||  | |||||||||||| ||||||    
T  169677 aggatccgttgacaccaggtgtcaacgaatttattgacaccaaatctcaaccat 169624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 10121607 - 10121551
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||| |||||||||| ||| || |||||||||||| ||||    
T  10121607 gagttaggatccgttgacaccaggtgtcaacggattggttgacaccaaatctcaacc 10121551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 19171775 - 19171839
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||| ||||| ||||||| |  ||||||||| |||||| ||||||||||| ||||| |||||||    
T  19171775 gagtcgggatccgttgacatcaagtgtcaacggattcgttgacaccaaatcctaaccttccattt 19171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 25468507 - 25468563
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||||  |||||||| |||||||||| |||| | |||||||||||| ||||    
T  25468507 gagtcaggatccattgacaccaggtgtcaacggattcattgacaccaaatctcaacc 25468563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 3e-59; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 211 - 355
Target Start/End: Complemental strand, 12346029 - 12345885
Alignment:
Q  211 aaccatccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgca 310  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  12346029 aaccatctattttattcaatcaaaggtctataatcgttgattcaccgaataaaattaaattgaaaacacagtattattgtactatttcttttcttctgca 12345930  T
Q  311 aaatttgacgttcttcttcacaccaacccaacagtatatttgttt 355  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||    
T  12345929 aaatttgacgttcttcctcacaccaacccaacagtatacttgttt 12345885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 12345890 - 12345781
Alignment:
Q  457 ttgttttttacggtggaatttcatgagtgcaaatggagtttctaaaatgtcggtttgatgcgttattgaaattgcatgatttgaaaatgttgacgaaggg 556  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12345890 ttgttttttacggtggaatttcatgagtgcaaatgaagtttctaaaatgtcggtttgatgcgttattgaaattgcatgatttgaaaattttgacgaaggg 12345791  T
Q  557 tgcaaggtat 566  Q
    ||||||||||    
T  12345790 tgcaaggtat 12345781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 19323817 - 19323743
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||  ||||||||    
T  19323817 caggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccatcgattttatttgattaaagg 19323743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 19653967 - 19654045
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    |||||| ||||||||||||||||||||||| | | |||| ||||||||||||||||| |  |||||||| ||| |||||    
T  19653967 gagtcaagatctgttgacacctggtgtcaatggactcgttgacaccaaatcttaaccgtttattttatttaatcaaagg 19654045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 2512439 - 2512491
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||    
T  2512439 caggatccgttgacacctgatgtcaacgaattcgttgacaccaaatattaacc 2512491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 10171273 - 10171329
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  10171273 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 10171329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 26529567 - 26529511
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  26529567 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 26529511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 33435337 - 33435392
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaac 213  Q
    |||| |||||| ||||||||||||||| |||| |||||| ||||||||||||||||    
T  33435337 gagttaggatccgttgacacctggtgttaacggattcgttgacaccaaatcttaac 33435392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 8489334 - 8489284
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||||||| ||||||||| |||||||||||||||||  ||||||||||    
T  8489334 gagtcaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 8489284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 33436327 - 33436274
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    |||||||||| ||||||||| | |||||||| |||||| |||||||||||||||    
T  33436327 agtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatcttaa 33436274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 10172020 - 10171964
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  10172020 gagttaggatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaacc 10171964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 19311880 - 19311828
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatctta 211  Q
    |||||||||  ||||||||| |||||||||| |||||| ||||||||||||||    
T  19311880 agtcaggattcgttgacaccaggtgtcaacggattcgttgacaccaaatctta 19311828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 19322992 - 19323048
Alignment:
Q  170 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||| |||||||||| |||||| |||||||||||| | ||||| ||||||||    
T  19322992 gttgacaccaggtgtcaacggattcgttgacaccaaatctcatccatcaattttatt 19323048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 21133281 - 21133225
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| |||||||||  |||| ||||||||||| |||||||||||||||||    
T  21133281 gagttaggatccgttgacaccatgtgttaacgaattcgttgacaccaaatcttaacc 21133225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 26528820 - 26528876
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  26528820 gagttaggatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaacc 26528876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 18227729 - 18227791
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatt 221  Q
    ||||||||||| ||||||||| | |||||||| |||||| |||||||||||  |||||||||||    
T  18227729 gagtcaggatccgttgacaccag-tgtcaacggattcgttgacaccaaatcacaaccatccatt 18227791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 505534 - 505592
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    ||||||||||||||||||| | |||||||||  |||||| ||||||||||  |||||||    
T  505534 gagtcaggatctgttgacatcaggtgtcaacagattcgttgacaccaaattctaaccat 505592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 3623172 - 3623228
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||||||| ||||    
T  3623172 gagttaggatccgttgacatcaggtgtcaacgaattctttgacaccaaatctcaacc 3623228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 8488466 - 8488522
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| ||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  8488466 gagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 8488522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 8e-44; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 29559474 - 29559320
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccg 257  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||| |||||||| |||||  |    
T  29559474 gagttaggatctgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaatcatccattttattcaatcaaaggtctgtaatcgtttgttcatgg 29559375  T
Q  258 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaa 312  Q
    |||||| |||||||||||||| |  ||||||| ||| ||||||||||||||||||    
T  29559374 aataaacttaaattgaaaacacattattattgcactctttcttttcttctgcaaa 29559320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 1296377 - 1296442
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||| |||||    
T  1296377 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccatcaatttt 1296442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 9276384 - 9276319
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||| ||||||| |||||    
T  9276384 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccatcaatttt 9276319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 15774205 - 15774273
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaatt 231  Q
    |||||| |||||||||||||||||||||||| || |||||||||||| ||||||| |||||||| ||||    
T  15774205 aggatccgttgacacctggtgtcaacgaatttgttgacaccaaatctcaaccatcaattttatttaatt 15774273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 9540333 - 9540387
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  9540333 caggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaaccat 9540387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 22301919 - 22301866
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  22301919 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaaccat 22301866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 1297177 - 1297109
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  1297177 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 1297109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 9275584 - 9275652
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  9275584 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 9275652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 24933838 - 24933898
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||||| |||||| |||||    
T  24933838 caggatccgttgacacctggtgtcaacgaattcattgacaccaaatctcaaccattcattt 24933898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 26752771 - 26752719
Alignment:
Q  164 ggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    ||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  26752771 ggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatcttaaccat 26752719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 29719448 - 29719508
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| |||| |||||||    
T  29719448 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccctccattt 29719508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 29512369 - 29512420
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    |||||| |||| |||||||||||||||||||||||| || ||||||||||||    
T  29512369 gagtcatgatccgttgacacctggtgtcaacgaatttgttgacaccaaatct 29512420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 33512095 - 33512149
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| |||| ||||    
T  33512095 gagtcaggatccgttgacacctagtgtcaacgaattcgttgacactaaatattaa 33512149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 38361077 - 38361130
Alignment:
Q  170 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    ||||||| | ||||||||||||||||| |||||||||||| ||||||| |||||    
T  38361077 gttgacatcaggtgtcaacgaattcgttgacaccaaatctcaaccatcaatttt 38361130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 18174724 - 18174668
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||| | ||||||||||||||||| |||||||||||| ||||    
T  18174724 gagttaggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 18174668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 22560622 - 22560566
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||| | |||||||||| |||||| |||||||||||| ||||    
T  22560622 gagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatctcaacc 22560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 27177915 - 27177959
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 207  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||    
T  27177915 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 27177959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 36237629 - 36237697
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||||| ||||||||| |||||||||| |||| | |||||||||| | ||||||  ||||||||    
T  36237629 gagtcaggatccgttgacaccaggtgtcaacggattcattgacaccaaatttcaaccatttattttatt 36237697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 8541749 - 8541803
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    ||||||||||| ||||||| | ||| ||||||||||||| ||||| |||||||||    
T  8541749 gagtcaggatccgttgacatcaggtctcaacgaattcgttgacacaaaatcttaa 8541803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 11751123 - 11751073
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||| |||||| ||||||||| |||||||||||||||||  ||||||||||    
T  11751123 gagttaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 11751073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 18174097 - 18174147
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||| |||||| ||||||||| ||||| ||||||||||| |||||||||||    
T  18174097 gagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 18174147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 22301192 - 22301242
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||||||| ||||||||| ||||||||||||| |||  ||||||||||    
T  22301192 gagtcaggatccgttgacaccaggtgtcaacgaatccgttaacaccaaatc 22301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 23343778 - 23343828
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    |||||||||||||||||||| | |||||||| |||||| |||| |||||||    
T  23343778 agtcaggatctgttgacaccagatgtcaacggattcgttgacatcaaatct 23343828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 23857078 - 23857028
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||| |||||| |||||||||||||||||||| ||| || |||||||||||    
T  23857078 gagttaggatccgttgacacctggtgtcaacggattggttgacaccaaatc 23857028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 11007238 - 11007287
Alignment:
Q  167 tctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||||||||||| |||||||||| |||||| ||||| |||||| ||||||    
T  11007238 tctgttgacaccaggtgtcaacggattcgttgacactaaatctcaaccat 11007287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 16693015 - 16692974
Alignment:
Q  171 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    |||||||| |||||||||| |||||| |||||||||||||||    
T  16693015 ttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 16692974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 11750255 - 11750311
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| ||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  11750255 gagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 11750311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 12725669 - 12725605
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    |||| |||||| ||||||||| |||||||||| ||| || |||||||||||  |||||| |||||    
T  12725669 gagttaggatccgttgacaccaggtgtcaacggatttgttgacaccaaatcccaaccattcattt 12725605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 18820430 - 18820494
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||| |||||  |||||| | |||||||||| |||||| ||||||||||| ||||| |||||||    
T  18820430 gagtcgggatccattgacatcaggtgtcaacggattcgttgacaccaaatcctaaccttccattt 18820494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 19918776 - 19918720
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||| ||| |||||||| |||||| |||| ||||||| ||||    
T  19918776 gagtcaggatccgttgacatctgatgtcaacggattcgttgacatcaaatctcaacc 19918720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 18829576 - 18829668
Alignment:
Q  12 aagaatatgaaagaaaaataatcaaatgataacctgtggacatccaaggctgaataatataaaaagacttgctacatacaaaagccattactc 104  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  18829576 aagaaaatgaaagaaaaataatcaaatgataacatgtgaacatccaaggctaaataatataaatagacttgctatatacaaaagccattactc 18829668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 158 - 315
Target Start/End: Complemental strand, 16664180 - 16664023
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccg 257  Q
    |||| |||||| ||||||||| |||||||||| || ||| ||||| |||||| ||||||| ||| || | |||  || | ||||||| ||| |||||||     
T  16664180 gagttaggatccgttgacaccaggtgtcaacggatccgttgacactaaatctcaaccatctattgtaataaatccaatggctataattgtttgttcacca 16664081  T
Q  258 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatt 315  Q
    |||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  16664080 aataaacttaaattgaaaacatagtattattgtactctttcttttcttctgcaaaatt 16664023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 158 - 315
Target Start/End: Complemental strand, 17638540 - 17638383
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccg 257  Q
    |||| |||||| ||||||||| |||||||||| || ||| ||||| |||||| ||||||| ||| || | |||  || | ||||||| ||| |||||||     
T  17638540 gagttaggatccgttgacaccaggtgtcaacggatccgttgacactaaatctcaaccatctattgtaataaatccaatggctataattgtttgttcacca 17638441  T
Q  258 aataaaattaaattgaaaacaaagcattattgtactatttcttttcttctgcaaaatt 315  Q
    |||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  17638440 aataaacttaaattgaaaacatagtattattgtactctttcttttcttctgcaaaatt 17638383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 44472423 - 44472350
Alignment:
Q  12 aagaatatgaaagaaaaataatcaaatgataacctgtggacatccaaggctgaataatataaaaagacttgcta 85  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  44472423 aagaaaatgaaagaaaaataatcaaatgataacctatgaacatccaaggctaaataatataaaaagacttgcta 44472350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 202 - 435
Target Start/End: Original strand, 22319973 - 22320201
Alignment:
Q  202 ccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaattgaaaacaaagcattattgtactatttcttt 301  Q
    ||||||||  |||||||||| ||||| || ||||| ||||||||||| ||||||| |||||| |||||||||||||| || | ||||||||| ||| |||    
T  22319973 ccaaatctcgaccatccattgtattcgatcaaaggcctataatcgtttgttcaccaaataaacttaaattgaaaacacagtaatattgtactcttttttt 22320072  T
Q  302 tctt----ctgcaaaatttgacgttcttcttcacaccaacccaacagtatatttgtttcgatcgcagctcgtcaccaagatatttcttatttatgtcaaa 397  Q
    | ||     |||||| |||| |  ||||| ||| ||||| |||||| ||| |||      |  ||| |||||   ||||||||||| |||||||||||||    
T  22320073 tttttttaatgcaaattttgtcactcttcctcaaaccaatccaacaatattttt------aatgcaactcgt---caagatatttcctatttatgtcaaa 22320163  T
Q  398 tttattaaattgatcgcaataggagtatgatagtgaat 435  Q
    |||||| |||| |||||||| |||||||| ||||||||    
T  22320164 tttattcaatttatcgcaattggagtatggtagtgaat 22320201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 435
Target Start/End: Original strand, 3163686 - 3163845
Alignment:
Q  272 gaaaacaaagcattattgtactatttcttttcttctgcaaaatttgacgttcttcttcacaccaacccaacagtatatttgtttcgatcgcagctcgtca 371  Q
    ||||||| || ||||||||||| |||||||| || ||||||||||| |  ||||| ||| ||||| |||||| |||  |||||| ||| ||| ||| |||    
T  3163686 gaaaacacagtattattgtactctttctttt-ttatgcaaaatttgtcactcttcctcaaaccaatccaacaatattgttgtttggattgcaactcatca 3163784  T
Q  372 ccaagatatttcttatttatgtcaaatttattaaattgatcgcaataggagtatgatagtgaat 435  Q
       | ||||||| ||||||||||||||||||| |||| ||| |||| |||||||||||||||||    
T  3163785 ---atatatttcctatttatgtcaaatttattcaatttatcacaattggagtatgatagtgaat 3163845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 22022522 - 22022449
Alignment:
Q  12 aagaatatgaaagaaaaataatcaaatgataacctgtggacatccaaggctgaataatataaaaagacttgcta 85  Q
    ||||| ||||||| |||||||||||||| ||||||||| | |||||||||| ||||||||||||||||||||||    
T  22022522 aagaaaatgaaaggaaaataatcaaatgctaacctgtgaagatccaaggctaaataatataaaaagacttgcta 22022449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 1417610 - 1417663
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  1417610 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaaccat 1417663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 25343294 - 25343229
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    ||||||||||| ||||||||| |||||||| |||||||| |||||||||||| ||||||| |||||    
T  25343294 gagtcaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaaccatcaatttt 25343229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 38226025 - 38225972
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38226025 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcttaaccat 38225972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 25342494 - 25342562
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  25342494 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 25342562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 25343300 - 25343368
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  25343300 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatcaattttatt 25343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 7668480 - 7668543
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    |||||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||| |||||    
T  7668480 agtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccattcattt 7668543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 46428184 - 46428243
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatc 217  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||||    
T  46428184 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatc 46428243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 26636100 - 26636178
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||| |||| | |||| |||| ||| |||||    
T  26636100 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgtacattatatttaatcaaagg 26636178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 36378809 - 36378858
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 207  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  36378809 gagtcaggatctgttgacacctggtgtcgacggattcgttgacaccaaat 36378858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 27948443 - 27948499
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  27948443 gagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 27948499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 30660590 - 30660658
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| | ||||| ||||||||    
T  30660590 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcatccatcaattttatt 30660658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 37950522 - 37950454
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| | ||||| ||||||||    
T  37950522 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcatccatcaattttatt 37950454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 45099948 - 45099892
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||| ||||||    
T  45099948 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaattttaacc 45099892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 3163585 - 3163660
Alignment:
Q  203 caaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccgaataaaattaaattgaaaaca 278  Q
    ||||| || |||||||||| ||||  || ||||| ||||||||| | |||||||||||||| ||||||||||||||    
T  3163585 caaattttgaccatccattgtatttgatcaaaggcctataatcgattgttcaccgaataaatttaaattgaaaaca 3163660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 25599019 - 25599070
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    ||||||||||| ||||||||| |||||||||| |||||| ||||||||||||    
T  25599019 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 25599070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 46428872 - 46428821
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||| |||||||    
T  46428872 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatct 46428821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 13785644 - 13785594
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||||||    
T  13785644 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 13785594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 30661506 - 30661432
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| |||| |  |||||||| ||| |||||    
T  30661506 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttatttaatcaaagg 30661432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 37949606 - 37949680
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| |||| |  |||||||| ||| |||||    
T  37949606 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttgattttatttaatcaaagg 37949680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 3029248 - 3029203
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||    
T  3029248 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 3029203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 3772581 - 3772516
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| |||| || |||||    
T  3772581 gagttaggatccgttgacaccaggtgtcaacgtattcgttgacaccaaatctcaaccgtctatttt 3772516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 21497035 - 21496982
Alignment:
Q  161 tcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||| ||||||| | ||||||||||||||||| |||||||||||| ||||    
T  21497035 tcaggatccgttgacaacaggtgtcaacgaattcgttgacaccaaatctcaacc 21496982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 23889861 - 23889812
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 207  Q
    |||||| |||| |||| |||||||||||||||||||||| ||||||||||    
T  23889861 gagtcaagatccgttggcacctggtgtcaacgaattcgttgacaccaaat 23889812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 18977823 - 18977759
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    ||||||||||  |||||||| |||||||||| ||||||  ||||||||||| ||||||| |||||    
T  18977823 agtcaggatccattgacaccaggtgtcaacggattcgttaacaccaaatctcaaccatcaatttt 18977759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 24389666 - 24389594
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaag 235  Q
    |||||| ||||||||| |||||||||| |||| | |||||||||||| ||||||  |||||||| ||| ||||    
T  24389666 aggatccgttgacaccaggtgtcaacggattcattgacaccaaatctcaaccatttattttatttaatcaaag 24389594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 40273557 - 40273613
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||| |||||||| |||||||| |||||||||||| ||||    
T  40273557 gagttaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacc 40273613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 26636914 - 26636859
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||| ||||||||  |||||||||| |||||| |||||||||||| ||||    
T  26636914 agtcaggatccgttgacacaaggtgtcaacggattcgttgacaccaaatctcaacc 26636859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 47719746 - 47719671
Alignment:
Q  171 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat-taaaggtctataatc 245  Q
    |||||||| |||||||||| |||||| ||||||||||||||| | | ||||| ||| ||| |||||||| ||||||    
T  47719746 ttgacaccaggtgtcaacggattcgttgacaccaaatcttaaacgttcatttaatttaatctaaaggtcaataatc 47719671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 19067638 - 19067712
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||||| |||||||||  ||||||||| |||||| |||||||||||| |||| |  |||||||| ||| |||||    
T  19067638 caggatccgttgacaccacgtgtcaacggattcgttgacaccaaatctcaaccgttgattttatttaatcaaagg 19067712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 3027987 - 3028032
Alignment:
Q  174 acacctggtgtcaacgaattcgtcgacaccaaatcttaaccatcca 219  Q
    ||||| ||||||||||||||||| |||||||||||| |||| ||||    
T  3027987 acaccaggtgtcaacgaattcgttgacaccaaatctcaaccgtcca 3028032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 5930525 - 5930558
Alignment:
Q  184 tcaacgaattcgtcgacaccaaatcttaaccatc 217  Q
    ||||||||||||| ||||||||||||||||||||    
T  5930525 tcaacgaattcgttgacaccaaatcttaaccatc 5930558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 23901136 - 23901095
Alignment:
Q  171 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    |||||||| ||||||||||||||||| ||||| |||||||||    
T  23901136 ttgacaccaggtgtcaacgaattcgttgacactaaatcttaa 23901095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 43065164 - 43065119
Alignment:
Q  165 gatctgttgacacctggtgtcaacgaattcgtcgacaccaaatctt 210  Q
    |||| ||||||||| |||||||||| |||||| |||||||||||||    
T  43065164 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatctt 43065119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 45099136 - 45099185
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||||||| ||||||| | |||||||||||||||||  ||||||||||    
T  45099136 agtcaggatccgttgacatcaggtgtcaacgaattcgttaacaccaaatc 45099185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 3688385 - 3688449
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||| ||||||||| | | |||||| |||||| |||||||||||||| ||||  ||||||||    
T  3688385 caggatccgttgacaccagatatcaacggattcgttgacaccaaatcttatccatttattttatt 3688449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 6507976 - 6508049
Alignment:
Q  12 aagaatatgaaagaaaaataatcaaatgataacctgtggacatccaaggctgaataatataaaaagacttgcta 85  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  6507976 aagaaaatgaaagaaaaataatcaaatgataacctgtgaacatccaaggctaaataatataaaaagacttgcta 6508049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 302
Target Start/End: Complemental strand, 7842581 - 7842440
Alignment:
Q  161 tcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaaggtctataatcgttggttcaccgaat 260  Q
    ||||||||  |||||| | ||||||||||||||||| |||||||||||| ||||||| |||| ||| |||  || | |||||||  || || ||||||||    
T  7842581 tcaggatccattgacatcaggtgtcaacgaattcgttgacaccaaatctcaaccatctatttcattaaatccaatggctataattatttgtacaccgaat 7842482  T
Q  261 aaaattaaattgaaaacaaagcattattgtactatttctttt 302  Q
    ||| ||||||||||| || |  ||||||||||| ||||||||    
T  7842481 aaacttaaattgaaagcacaatattattgtactctttctttt 7842440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 8247694 - 8247772
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||| || |||||||| ||| |||||    
T  8247694 gagtcaggatccgttgacacctggtgtcaacggattcgttgacacaaaatcttaaccgtctattttatttaatcaaagg 8247772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 47785854 - 47785795
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatc 217  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||    
T  47785854 gagtcaggatctgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccatc 47785795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 142574 - 142517
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccat 220  Q
    |||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||||    
T  142574 aggatccgttgacaccgggtgtcaacgaattcattgacaccaaatcttaaccatccat 142517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 8248575 - 8248507
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||||| ||||||||| | |||||||| |||||| ||||||||||||||||| || ||||||||    
T  8248575 gagtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatcttaaccgtctattttatt 8248507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 8265365 - 8265437
Alignment:
Q  164 ggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaattaaagg 236  Q
    ||||| |||||||||||||||||||| |||||| ||||| ||||||||||| || |||||||| ||| |||||    
T  8265365 ggatccgttgacacctggtgtcaacggattcgttgacacaaaatcttaaccgtctattttatttaatcaaagg 8265437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 8266240 - 8266172
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||||| ||||||||| | |||||||| |||||| ||||||||||||||||| || ||||||||    
T  8266240 gagtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatcttaaccgtctattttatt 8266172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 24374787 - 24374851
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||||||||| ||||||||| | ||||||||||||||| |||||||||||| |||| |||||||    
T  24374787 gagtcaggatccgttgacaccagctgtcaacgaattcgttgacaccaaatctcaaccttccattt 24374851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 19080387 - 19080447
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||| | |||||| |||||    
T  19080387 caggatctgttgacaccaggtgtcaacggattcgttgacaccaaatttcaaccattcattt 19080447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 26147087 - 26147031
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  26147087 gagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 26147031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 11938714 - 11938765
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||| ||||    
T  11938714 aggatctgttcacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 11938765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 598523 - 598573
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||||||||||||||||| | |||||||||||||||  ||||||||||    
T  598523 gagtcaggatctgttgacaccagatgtcaacgaattcgttaacaccaaatc 598573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 599351 - 599305
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||||    
T  599351 aggatccgttgacacctggtgtcaacggattcgttgacaccaaatct 599305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 31329772 - 31329714
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    ||||||||||| ||||||||| |||||||||| ||||||  |||||||||| |||||||    
T  31329772 gagtcaggatccgttgacaccaggtgtcaacggattcgttaacaccaaatcctaaccat 31329714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 7841791 - 7841857
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    |||| |||||| |||||||  |||||||||||||||||| |||||||||||| ||| ||| ||||||||    
T  7841791 gagttaggatccgttgaca--tggtgtcaacgaattcgttgacaccaaatctcaactatctattttatt 7841857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 9365167 - 9365224
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 215  Q
    ||||||||||| ||| ||||| |||||||||||||| || |||||||||||| |||||    
T  9365167 gagtcaggatccgttaacaccaggtgtcaacgaatttgttgacaccaaatctcaacca 9365224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 20774235 - 20774179
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  20774235 gagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 20774179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 24158875 - 24158819
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||||  |||||||| |||||||||  |||||| |||||||||||||||||    
T  24158875 gagtcaggatccattgacaccaggtgtcaacagattcgttgacaccaaatcttaacc 24158819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 30573764 - 30573708
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||||  |||||||| |||||||||| |||||| |||||||||||| ||||    
T  30573764 gagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 30573708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 40495093 - 40495141
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaa 206  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  40495093 gagtcaggatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 40495141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 47688534 - 47688478
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||| ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  47688534 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 47688478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 56262480 - 56262532
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||| ||||||||| |||||||| |||||||| |||||||||||| ||||    
T  56262480 caggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacc 56262532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 1866346 - 1866400
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatc 217  Q
    |||||| ||||||||  |||||||| |||||||| |||||||||||| |||||||    
T  1866346 aggatccgttgacactaggtgtcaatgaattcgttgacaccaaatctcaaccatc 1866400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 44792691 - 44792641
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||||||||  |||||||| |||||||||||||||||  ||||||||||    
T  44792691 gagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 44792641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 47687907 - 47687957
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||| |||||| ||||||||| ||||| ||||||||||| |||||||||||    
T  47687907 gagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 47687957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 55976176 - 55976218
Alignment:
Q  170 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    ||||||||| |||||||||| |||||| |||||||||||||||    
T  55976176 gttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 55976218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 44469491 - 44469540
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||| |||| | ||||||| ||||||||||||||||| |||||||||||    
T  44469491 agtcatgatccgatgacaccaggtgtcaacgaattcgttgacaccaaatc 44469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 55001488 - 55001439
Alignment:
Q  165 gatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| ||||||||| |||||||||| |||||| ||||| |||||||||||    
T  55001488 gatccgttgacaccaggtgtcaacggattcgttgacactaaatcttaacc 55001439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 55976995 - 55976922
Alignment:
Q  173 gacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat-taaaggtctataatc 245  Q
    |||||| |||||||||| |||||| ||||||||||||||| | | ||||| ||| ||| |||||||| ||||||    
T  55976995 gacaccaggtgtcaacggattcgttgacaccaaatcttaaacgttcatttaatttaatctaaaggtcaataatc 55976922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 1465318 - 1465382
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattt 222  Q
    ||||||||||| ||||||||| |||||||||  |||| | |||| ||||||  ||||||||||||    
T  1465318 gagtcaggatccgttgacaccaggtgtcaacagattcattgacatcaaatcacaaccatccattt 1465382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 16902903 - 16902943
Alignment:
Q  183 gtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    |||||||||||||| |||||||||||| ||||||| |||||    
T  16902903 gtcaacgaattcgttgacaccaaatctcaaccatcaatttt 16902943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 16903686 - 16903642
Alignment:
Q  170 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||| |||||||||| |||||| |||||||||||| ||||    
T  16903686 gttgacaccaggtgtcaacggattcgttgacaccaaatctcaacc 16903642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 45081458 - 45081390
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||||| |||||||||| ||||||||| |||||| |||||||||||| ||||||  ||||||||    
T  45081458 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcaaccatttattttatt 45081390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 48648201 - 48648257
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||    
T  48648201 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaacc 48648257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 14871151 - 14871202
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  14871151 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatct 14871202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 13477055 - 13477113
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccat 216  Q
    ||||||||||| ||||||||| ||||||||||||||| | ||||||||||| |||||||    
T  13477055 gagtcaggatccgttgacaccaggtgtcaacgaattcattgacaccaaatcctaaccat 13477113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 37520614 - 37520548
Alignment:
Q  160 gtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||| ||||| ||| ||||||||||||||||| |||||||||||| ||||||| || |||||    
T  37520614 gtcaggatccgttgataccaggtgtcaacgaattcgttgacaccaaatctcaaccatcaatcttatt 37520548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 20213586 - 20213530
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| |||||| |||||||||| ||||||||||| |||||    
T  20213586 gagtcaggatccgttgacaccaggtgtcgacgaattcgttgacaccaaatcctaacc 20213530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 46150784 - 46150716
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttatt 226  Q
    ||||||||||| ||||||||  |||||||||| |||||| |||||||||||| ||||||  ||||||||    
T  46150784 gagtcaggatccgttgacactaggtgtcaacggattcgttgacaccaaatctcaaccatttattttatt 46150716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 37988273 - 37988222
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    |||||||||||  |||||||| ||||||||||||||||| ||||||||||||    
T  37988273 gagtcaggatccattgacaccaggtgtcaacgaattcgttgacaccaaatct 37988222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 51827548 - 51827493
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||| |||| |||||||||||||||||||| |||||| | |||||||||||||||    
T  51827548 agtcaagatccgttgacacctggtgtcaacggattcgttgtcaccaaatcttaacc 51827493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 10847289 - 10847327
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgt 196  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  10847289 gagtcaggatccgttgacacctggtgtcaacgaattcgt 10847327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 20212978 - 20213028
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||| ||| ||||||||| ||||||||||||||||| |||||||||||    
T  20212978 gagtcagaatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 20213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 21727580 - 21727530
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||||||    
T  21727580 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 21727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 8949938 - 8949995
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccat 220  Q
    |||||| |||||||||  |||||||||||| ||| ||||| |||||||||||||||||    
T  8949938 aggatccgttgacaccatgtgtcaacgaatccgttgacacaaaatcttaaccatccat 8949995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 17603171 - 17603220
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaa 212  Q
    |||||| ||||||||| |||||||||| |||||| |||||||||||||||    
T  17603171 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaa 17603220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 52266508 - 52266443
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    ||||||||||| ||| ||||| ||||| ||||||||||| |||||||||||| |||| || |||||    
T  52266508 gagtcaggatccgttaacaccaggtgttaacgaattcgttgacaccaaatctcaaccgtctatttt 52266443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 981677 - 981721
Alignment:
Q  170 gttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||    
T  981677 gttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 981721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 27082774 - 27082830
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||||  |||||||  ||||||||||||||||| ||||||||||| |||||    
T  27082774 gagtcaggatccattgacactaggtgtcaacgaattcgttgacaccaaatcctaacc 27082830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 31974654 - 31974714
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    |||||| |||||||||  ||||||||| |||||| |||||||||||| ||||||| |||||    
T  31974654 aggatccgttgacaccaagtgtcaacggattcgttgacaccaaatctcaaccatctatttt 31974714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 48507083 - 48507031
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||| ||||||||| |||||||| |||||||| |||||||||||| ||||    
T  48507083 caggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaacc 48507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 48764475 - 48764531
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||||  |||||| | ||||||||||||||||| |||||||||||| ||||    
T  48764475 gagtcaggatccattgacatcaggtgtcaacgaattcgttgacaccaaatctcaacc 48764531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 13349418 - 13349469
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||| ||||| ||| ||||||||| ||||||| |||||||||||||||||    
T  13349418 aggatcggttgataccaggtgtcaacaaattcgttgacaccaaatcttaacc 13349469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 13477820 - 13477777
Alignment:
Q  171 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  13477820 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaacc 13477777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 48765124 - 48765069
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||  |||||||| |||||||| | |||||| |||||||||||||||||    
T  48765124 agtcaggatccattgacaccaggtgtcaatggattcgttgacaccaaatcttaacc 48765069  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 265152 - 265102
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatct 209  Q
    ||||| |||| ||||||||| |||||||||| |||||| ||||||||||||    
T  265152 agtcatgatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 265102  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 17604002 - 17603928
Alignment:
Q  172 tgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat-taaaggtctataatc 245  Q
    ||||||| |||||||||| |||||| ||||||||||||||| | | ||||| ||| ||| |||||||| ||||||    
T  17604002 tgacaccaggtgtcaacggattcgttgacaccaaatcttaaacgttcatttaatttaatctaaaggtcaataatc 17603928  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 23706836 - 23706786
Alignment:
Q  180 ggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat 230  Q
    |||||||||  |||||| |||||||||||| ||||||| ||||||||||||    
T  23706836 ggtgtcaacatattcgttgacaccaaatctcaaccatcaattttattcaat 23706786  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 23725292 - 23725242
Alignment:
Q  180 ggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat 230  Q
    |||||||||  |||||| |||||||||||| ||||||| ||||||||||||    
T  23725292 ggtgtcaacatattcgttgacaccaaatctcaaccatcaattttattcaat 23725242  T

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Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 23743748 - 23743698
Alignment:
Q  180 ggtgtcaacgaattcgtcgacaccaaatcttaaccatccattttattcaat 230  Q
    |||||||||  |||||| |||||||||||| ||||||| ||||||||||||    
T  23743748 ggtgtcaacatattcgttgacaccaaatctcaaccatcaattttattcaat 23743698  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 33276890 - 33276940
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||||||||||| ||| |||||||||| | |||||| |||||||||||    
T  33276890 gagtcaggatctgttaacatctggtgtcaatggattcgttgacaccaaatc 33276940  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 33277559 - 33277509
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||| ||| ||||||||| |||||||||||||||||  ||||||||||    
T  33277559 gagtcagaatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 33277509  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 44029824 - 44029786
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgt 196  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  44029824 gagtcaggatccgttgacatctggtgtcaacgaattcgt 44029786  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 48413317 - 48413367
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||| ||||| |||||||||| |||||||||| |||||| |||||||||||    
T  48413317 gagtaaggatttgttgacaccaggtgtcaacggattcgttgacaccaaatc 48413367  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 48649226 - 48649172
Alignment:
Q  160 gtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||  |||||||| |||||||||  |||||| |||||||||||||||||    
T  48649226 gtcaggatccattgacaccaggtgtcaacagattcgttgacaccaaatcttaacc 48649172  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 48506443 - 48506491
Alignment:
Q  165 gatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||| |||||||| |||||||||||||||||| |||||||||||| ||||    
T  48506443 gatccgttgacac-tggtgtcaacgaattcgttgacaccaaatctcaacc 48506491  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 52281764 - 52281821
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacca 215  Q
    ||||||| ||| ||||| |||||||||||||| |||||| ||||||| |||| |||||    
T  52281764 gagtcagaatccgttgatacctggtgtcaacggattcgttgacaccagatctcaacca 52281821  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 52605538 - 52605501
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcg 195  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  52605538 gagtcaggatccgttgacaccaggtgtcaacgaattcg 52605501  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 54458715 - 54458670
Alignment:
Q  163 aggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    |||||| |||||||||||||||||||| ||| || |||||||||||    
T  54458715 aggatccgttgacacctggtgtcaacggattggttgacaccaaatc 54458670  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 41458031 - 41458087
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||  ||||| ||| |||||||||| |||||| |||||||||||| ||||    
T  41458031 gagtcaggattcgttgataccaggtgtcaacggattcgttgacaccaaatctcaacc 41458087  T

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Target: scaffold0176 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 26589 - 26652
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatt 221  Q
    ||||||||||| ||||||||| |||||||||| |||||| |||||||||||  |||||||||||    
T  26589 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcacaaccatccatt 26652  T

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Target: scaffold0085 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 15900 - 15848
Alignment:
Q  171 ttgacacctggtgtcaacgaattcgtcgacaccaaatcttaaccatccatttt 223  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||| |||||    
T  15900 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccatcaatttt 15848  T

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Target: scaffold0085; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 15020 - 15076
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| |||||||||| ||||||||| |||| | |||||||||||| ||||    
T  15020 gagtcaggatccgttgacacctagtgtcaacggattcattgacaccaaatctcaacc 15076  T

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Target: scaffold0085; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 15080 - 15135
Alignment:
Q  159 agtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    |||||||||| |||||||||| ||||||||| |||| | |||||||||||| ||||    
T  15080 agtcaggatccgttgacacctagtgtcaacggattcattgacaccaaatctcaacc 15135  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 428956 - 428900
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatcttaacc 214  Q
    ||||||||||| ||||||||| ||| ||||||||||||| |||||||||||| ||||    
T  428956 gagtcaggatccgttgacacccggtatcaacgaattcgttgacaccaaatctcaacc 428900  T

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Target: scaffold1207 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 1588 - 1634
Alignment:
Q  162 caggatctgttgacacctggtgtcaacgaattcgtcgacaccaaatc 208  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  1588 caggatcggttgacaccaggtgtcaacgaattcgttgacaccaaatc 1634  T

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Target: scaffold0418 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 6939 - 6891
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaa 206  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  6939 gagtcaggatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 6891  T

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Target: scaffold0504 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 5434 - 5385
Alignment:
Q  158 gagtcaggatctgttgacacctggtgtcaacgaattcgtcgacaccaaat 207  Q
    ||||||||||| ||||||||| |||||||||| ||| || ||||||||||    
T  5434 gagtcaggatccgttgacaccaggtgtcaacggatttgttgacaccaaat 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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