View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19590_low_38 (Length: 228)

Name: NF19590_low_38
Description: NF19590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19590_low_38
NF19590_low_38
[»] chr4 (47 HSPs)
chr4 (1-213)||(49387133-49387333)
chr4 (11-72)||(38556116-38556178)
chr4 (9-71)||(41376756-41376819)
chr4 (1-74)||(5747951-5748025)
chr4 (3-74)||(54036940-54037012)
chr4 (3-73)||(41935659-41935730)
chr4 (9-74)||(16020129-16020195)
chr4 (12-74)||(26842975-26843037)
chr4 (1-74)||(52654008-52654082)
chr4 (3-74)||(16530484-16530556)
chr4 (1-68)||(22539769-22539837)
chr4 (3-73)||(26948150-26948221)
chr4 (9-74)||(17362375-17362440)
chr4 (1-74)||(18568101-18568175)
chr4 (3-68)||(26886692-26886758)
chr4 (1-74)||(32922231-32922305)
chr4 (1-74)||(36868108-36868182)
chr4 (9-74)||(39791993-39792059)
chr4 (3-68)||(44551081-44551147)
chr4 (1-74)||(52537955-52538029)
chr4 (3-67)||(10993791-10993856)
chr4 (3-74)||(25331893-25331965)
chr4 (11-74)||(45801294-45801358)
chr4 (1-71)||(45655772-45655843)
chr4 (9-74)||(15516477-15516543)
chr4 (1-62)||(20984002-20984064)
chr4 (3-68)||(46648151-46648217)
chr4 (3-74)||(9902729-9902801)
chr4 (3-74)||(35130962-35131034)
chr4 (36-71)||(39792117-39792152)
chr4 (36-74)||(9902856-9902894)
chr4 (36-74)||(16020033-16020071)
chr4 (36-74)||(17362498-17362536)
chr4 (36-74)||(20984114-20984152)
chr4 (36-74)||(22539887-22539925)
chr4 (36-74)||(23572801-23572839)
chr4 (36-74)||(26842876-26842914)
chr4 (3-68)||(32187996-32188062)
chr4 (36-74)||(43264271-43264309)
chr4 (3-68)||(44835055-44835121)
chr4 (36-68)||(15516388-15516420)
chr4 (3-62)||(23572689-23572749)
chr4 (36-68)||(24270562-24270594)
chr4 (36-68)||(31857781-31857813)
chr4 (36-68)||(32488784-32488816)
chr4 (43-71)||(37068820-37068848)
chr4 (11-74)||(46674765-46674829)
[»] chr1 (53 HSPs)
chr1 (9-74)||(27065317-27065382)
chr1 (3-74)||(17504209-17504281)
chr1 (1-74)||(3459799-3459873)
chr1 (1-74)||(5618235-5618309)
chr1 (1-68)||(16515716-16515784)
chr1 (3-74)||(48524657-48524729)
chr1 (9-74)||(40934494-40934560)
chr1 (9-74)||(50312081-50312147)
chr1 (3-74)||(4695012-4695084)
chr1 (1-68)||(9877485-9877553)
chr1 (3-74)||(12650088-12650160)
chr1 (3-74)||(45286308-45286380)
chr1 (3-68)||(1501685-1501751)
chr1 (9-74)||(8853267-8853333)
chr1 (9-74)||(32694384-32694450)
chr1 (1-74)||(44344188-44344262)
chr1 (1-74)||(50208435-50208509)
chr1 (3-67)||(8828745-8828810)
chr1 (4-68)||(48970782-48970847)
chr1 (9-68)||(10296764-10296824)
chr1 (1-72)||(34480348-34480420)
chr1 (3-74)||(39673002-39673074)
chr1 (1-68)||(40770222-40770290)
chr1 (1-74)||(730963-731037)
chr1 (1-62)||(6489036-6489098)
chr1 (1-62)||(45315420-45315482)
chr1 (1-74)||(26095564-26095639)
chr1 (1-72)||(28554354-28554426)
chr1 (3-74)||(49021743-49021814)
chr1 (9-74)||(25012723-25012790)
chr1 (31-74)||(45315333-45315376)
chr1 (11-69)||(45569085-45569144)
chr1 (1-62)||(5586575-5586637)
chr1 (36-74)||(5586687-5586725)
chr1 (36-74)||(6488948-6488986)
chr1 (17-74)||(17191275-17191333)
chr1 (36-74)||(25012848-25012886)
chr1 (36-74)||(26095689-26095727)
chr1 (36-74)||(26874303-26874341)
chr1 (36-74)||(27065221-27065259)
chr1 (11-68)||(27547024-27547082)
chr1 (36-74)||(28554266-28554304)
chr1 (36-74)||(32694508-32694546)
chr1 (36-74)||(33471611-33471649)
chr1 (36-74)||(40934618-40934656)
chr1 (3-68)||(43726371-43726437)
chr1 (36-74)||(45286432-45286470)
chr1 (3-68)||(46283484-46283550)
chr1 (36-69)||(3459716-3459749)
chr1 (36-68)||(5618153-5618185)
chr1 (9-68)||(8641117-8641177)
chr1 (1-48)||(35521384-35521432)
chr1 (40-68)||(50208560-50208588)
[»] chr8 (31 HSPs)
chr8 (1-74)||(26938350-26938424)
chr8 (9-74)||(40277394-40277460)
chr8 (3-74)||(29596478-29596550)
chr8 (3-74)||(42684954-42685026)
chr8 (1-74)||(8156784-8156858)
chr8 (1-74)||(17494887-17494961)
chr8 (3-74)||(29726693-29726765)
chr8 (3-74)||(36556611-36556683)
chr8 (3-68)||(33279018-33279084)
chr8 (1-74)||(39198781-39198855)
chr8 (3-74)||(18805822-18805893)
chr8 (1-72)||(30463992-30464064)
chr8 (12-74)||(34199010-34199073)
chr8 (1-62)||(1235672-1235734)
chr8 (36-74)||(21660803-21660841)
chr8 (1-62)||(21660891-21660953)
chr8 (36-74)||(26938262-26938300)
chr8 (1-62)||(27712852-27712914)
chr8 (1-74)||(33527104-33527178)
chr8 (36-74)||(40277298-40277336)
chr8 (3-62)||(10925268-10925328)
chr8 (36-74)||(148369-148407)
chr8 (36-74)||(1235784-1235822)
chr8 (1-62)||(4968174-4968236)
chr8 (1-62)||(9887223-9887285)
chr8 (36-74)||(27712964-27713002)
chr8 (36-74)||(30253702-30253740)
chr8 (1-62)||(30253790-30253852)
chr8 (36-74)||(34198911-34198949)
chr8 (1-62)||(34632313-34632375)
chr8 (36-74)||(34632425-34632463)
[»] chr6 (35 HSPs)
chr6 (1-74)||(28852264-28852338)
chr6 (1-74)||(2316565-2316639)
chr6 (11-68)||(13178397-13178455)
chr6 (3-74)||(9546577-9546649)
chr6 (3-74)||(17853809-17853881)
chr6 (1-74)||(2863744-2863818)
chr6 (9-74)||(20027849-20027915)
chr6 (9-74)||(22568839-22568905)
chr6 (13-74)||(24335611-24335673)
chr6 (3-74)||(1925192-1925264)
chr6 (3-74)||(9220179-9220251)
chr6 (3-74)||(13853308-13853380)
chr6 (3-74)||(21926230-21926302)
chr6 (12-75)||(24325167-24325231)
chr6 (1-74)||(2883047-2883121)
chr6 (9-74)||(3105776-3105842)
chr6 (1-74)||(8129609-8129683)
chr6 (3-68)||(11361871-11361937)
chr6 (3-74)||(685119-685191)
chr6 (3-74)||(3012079-3012151)
chr6 (3-74)||(9899271-9899343)
chr6 (1-68)||(12240562-12240630)
chr6 (3-74)||(25121663-25121735)
chr6 (9-74)||(1136917-1136983)
chr6 (36-72)||(2882961-2882997)
chr6 (36-74)||(3105680-3105718)
chr6 (36-74)||(8129733-8129771)
chr6 (36-74)||(8487938-8487976)
chr6 (1-62)||(8488026-8488088)
chr6 (36-74)||(13178299-13178337)
chr6 (36-74)||(14655276-14655314)
chr6 (36-74)||(22568963-22569001)
chr6 (36-74)||(24896248-24896286)
chr6 (43-71)||(12240688-12240716)
chr6 (1-72)||(24896336-24896408)
[»] scaffold0024 (1 HSPs)
scaffold0024 (3-74)||(107933-108004)
[»] chr7 (49 HSPs)
chr7 (1-74)||(19104349-19104423)
chr7 (2-74)||(21627009-21627082)
chr7 (1-68)||(45062144-45062212)
chr7 (1-74)||(11681998-11682072)
chr7 (1-74)||(38494990-38495064)
chr7 (3-74)||(7149457-7149529)
chr7 (11-74)||(23036723-23036787)
chr7 (11-74)||(34287592-34287656)
chr7 (3-74)||(41922448-41922520)
chr7 (9-74)||(11337968-11338034)
chr7 (9-74)||(12423921-12423987)
chr7 (9-74)||(17173261-17173327)
chr7 (1-74)||(19124907-19124981)
chr7 (9-74)||(20121281-20121347)
chr7 (1-74)||(21733232-21733306)
chr7 (9-74)||(41857313-41857379)
chr7 (1-74)||(43575138-43575212)
chr7 (9-74)||(44457956-44458022)
chr7 (9-74)||(47221783-47221849)
chr7 (3-74)||(8805910-8805982)
chr7 (3-74)||(8949458-8949530)
chr7 (9-68)||(21455726-21455786)
chr7 (3-74)||(45055488-45055560)
chr7 (11-74)||(45867521-45867585)
chr7 (3-74)||(46426737-46426809)
chr7 (4-74)||(31813806-31813877)
chr7 (1-74)||(2699693-2699767)
chr7 (9-74)||(24331551-24331617)
chr7 (1-74)||(32165385-32165459)
chr7 (1-74)||(42391460-42391534)
chr7 (3-67)||(46738347-46738412)
chr7 (1-71)||(31283318-31283388)
chr7 (12-74)||(41749656-41749719)
chr7 (36-74)||(2699817-2699855)
chr7 (1-62)||(7173019-7173081)
chr7 (1-74)||(8522401-8522474)
chr7 (33-74)||(21733144-21733185)
chr7 (3-74)||(49023654-49023726)
chr7 (36-71)||(24331458-24331493)
chr7 (36-74)||(7173131-7173169)
chr7 (36-74)||(8949368-8949406)
chr7 (36-74)||(41922358-41922396)
chr7 (17-74)||(49114353-49114411)
chr7 (36-68)||(17173171-17173203)
chr7 (36-68)||(20121405-20121437)
chr7 (36-68)||(38495114-38495146)
chr7 (36-68)||(41857223-41857255)
chr7 (36-68)||(44457866-44457898)
chr7 (36-68)||(45062262-45062294)
[»] chr3 (49 HSPs)
chr3 (9-74)||(26845062-26845128)
chr3 (9-72)||(11221070-11221134)
chr3 (3-74)||(11989681-11989753)
chr3 (3-74)||(28843898-28843970)
chr3 (11-74)||(44976829-44976893)
chr3 (9-74)||(2862777-2862843)
chr3 (1-74)||(18677989-18678063)
chr3 (9-74)||(29434473-29434539)
chr3 (1-74)||(35747856-35747930)
chr3 (1-74)||(38675057-38675131)
chr3 (3-71)||(15543165-15543234)
chr3 (1-68)||(6954161-6954229)
chr3 (3-74)||(20209226-20209298)
chr3 (3-74)||(44664787-44664859)
chr3 (3-74)||(45567484-45567556)
chr3 (3-74)||(46292748-46292820)
chr3 (4-74)||(39778355-39778426)
chr3 (3-68)||(44036852-44036918)
chr3 (9-74)||(45539908-45539974)
chr3 (9-68)||(14201968-14202028)
chr3 (3-74)||(21016997-21017069)
chr3 (11-74)||(27812643-27812707)
chr3 (9-68)||(45171660-45171720)
chr3 (11-74)||(53712327-53712391)
chr3 (4-74)||(11439967-11440038)
chr3 (1-55)||(18461784-18461839)
chr3 (9-74)||(32809230-32809296)
chr3 (1-74)||(15020437-15020511)
chr3 (1-62)||(41944040-41944102)
chr3 (9-74)||(44920070-44920136)
chr3 (9-74)||(45214453-45214519)
chr3 (10-74)||(14463198-14463263)
chr3 (1-47)||(31574356-31574403)
chr3 (36-74)||(14201872-14201910)
chr3 (1-74)||(18168918-18168992)
chr3 (9-74)||(25061377-25061442)
chr3 (36-74)||(36546179-36546217)
chr3 (36-74)||(36562097-36562135)
chr3 (36-74)||(38675181-38675219)
chr3 (36-74)||(39778479-39778517)
chr3 (36-74)||(41943952-41943990)
chr3 (36-74)||(44919974-44920012)
chr3 (36-74)||(45171778-45171816)
chr3 (36-74)||(49002435-49002473)
chr3 (33-74)||(35415439-35415480)
chr3 (3-63)||(43378217-43378278)
chr3 (3-74)||(49002313-49002383)
chr3 (36-68)||(14626218-14626250)
chr3 (36-68)||(25061500-25061532)
[»] chr5 (46 HSPs)
chr5 (3-74)||(14871900-14871972)
chr5 (3-74)||(1098968-1099040)
chr5 (3-74)||(3974289-3974361)
chr5 (3-74)||(40952234-40952306)
chr5 (3-73)||(16736969-16737040)
chr5 (1-74)||(1643615-1643689)
chr5 (1-74)||(12854651-12854725)
chr5 (1-74)||(19130946-19131020)
chr5 (9-74)||(30129645-30129711)
chr5 (1-74)||(31618243-31618317)
chr5 (3-74)||(2426395-2426467)
chr5 (1-68)||(19984424-19984492)
chr5 (1-68)||(24858567-24858635)
chr5 (3-74)||(33429699-33429771)
chr5 (3-74)||(37943691-37943763)
chr5 (4-74)||(2960970-2961041)
chr5 (4-74)||(2969438-2969509)
chr5 (1-74)||(2467135-2467209)
chr5 (3-68)||(3279270-3279336)
chr5 (9-74)||(13455848-13455914)
chr5 (33-74)||(40881538-40881579)
chr5 (3-74)||(13697394-13697466)
chr5 (3-74)||(31486033-31486105)
chr5 (3-74)||(32772067-32772139)
chr5 (9-64)||(42610953-42611009)
chr5 (1-67)||(7601676-7601743)
chr5 (9-63)||(22621134-22621189)
chr5 (9-62)||(6540073-6540127)
chr5 (36-74)||(19984336-19984374)
chr5 (1-62)||(37092267-37092329)
chr5 (3-74)||(13577341-13577411)
chr5 (1-68)||(5239442-5239510)
chr5 (1-68)||(7610345-7610413)
chr5 (1-72)||(8357229-8357301)
chr5 (10-68)||(34159259-34159318)
chr5 (36-74)||(1643739-1643777)
chr5 (36-74)||(7601793-7601831)
chr5 (36-74)||(14729646-14729684)
chr5 (36-74)||(37092379-37092417)
chr5 (36-68)||(5239360-5239392)
chr5 (36-68)||(19131070-19131102)
chr5 (36-68)||(22621247-22621279)
chr5 (36-68)||(30129556-30129588)
chr5 (3-74)||(33381595-33381666)
chr5 (36-68)||(39589776-39589808)
chr5 (36-68)||(42610863-42610895)
[»] chr2 (46 HSPs)
chr2 (11-74)||(341486-341550)
chr2 (1-74)||(42950595-42950669)
chr2 (1-74)||(44490380-44490454)
chr2 (3-74)||(9027191-9027263)
chr2 (3-74)||(11724783-11724855)
chr2 (11-74)||(19079433-19079497)
chr2 (3-74)||(23926467-23926539)
chr2 (3-74)||(31556823-31556895)
chr2 (1-68)||(33274479-33274547)
chr2 (3-68)||(1650585-1650651)
chr2 (3-68)||(10192167-10192233)
chr2 (1-74)||(11122720-11122794)
chr2 (9-74)||(11723878-11723944)
chr2 (11-74)||(3322072-3322136)
chr2 (3-74)||(9911988-9912060)
chr2 (3-74)||(17549145-17549217)
chr2 (11-74)||(22195999-22196063)
chr2 (3-74)||(26499577-26499649)
chr2 (3-74)||(29421769-29421841)
chr2 (3-68)||(1270191-1270257)
chr2 (1-74)||(13421238-13421312)
chr2 (1-74)||(28789031-28789105)
chr2 (9-74)||(35411953-35412019)
chr2 (9-74)||(40657376-40657442)
chr2 (3-74)||(29175000-29175072)
chr2 (3-74)||(30488246-30488318)
chr2 (3-74)||(42030615-42030687)
chr2 (4-74)||(3889038-3889109)
chr2 (3-74)||(16350758-16350832)
chr2 (1-62)||(2450176-2450238)
chr2 (36-74)||(11723782-11723820)
chr2 (9-74)||(15461331-15461397)
chr2 (9-74)||(18449525-18449591)
chr2 (36-74)||(341388-341426)
chr2 (36-74)||(2450288-2450326)
chr2 (36-74)||(3322193-3322231)
chr2 (1-62)||(10714096-10714158)
chr2 (36-74)||(10714208-10714246)
chr2 (36-74)||(16350668-16350706)
chr2 (36-74)||(22196123-22196161)
chr2 (1-74)||(22899183-22899257)
chr2 (36-74)||(35412077-35412115)
chr2 (36-74)||(40657500-40657538)
chr2 (36-74)||(42030739-42030777)
chr2 (1-68)||(1479110-1479177)
chr2 (43-71)||(13421153-13421181)
[»] scaffold0200 (2 HSPs)
scaffold0200 (3-68)||(4528-4594)
scaffold0200 (36-74)||(4438-4476)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-74)||(73449-73523)
scaffold0029 (36-74)||(73573-73611)
[»] scaffold0009 (1 HSPs)
scaffold0009 (9-74)||(258831-258897)
[»] scaffold0003 (2 HSPs)
scaffold0003 (2-74)||(323503-323576)
scaffold0003 (36-68)||(323613-323645)
[»] scaffold0119 (1 HSPs)
scaffold0119 (3-68)||(41445-41511)
[»] scaffold0077 (1 HSPs)
scaffold0077 (3-68)||(10085-10151)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-65)||(257777-257842)
[»] scaffold0592 (1 HSPs)
scaffold0592 (3-74)||(8464-8536)
[»] scaffold0019 (1 HSPs)
scaffold0019 (3-74)||(44946-45018)


Alignment Details
Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 49387333 - 49387133
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaatttaagcttaaaaatgtatatgaaaatggacaaaaatgaccattattaagcttaaatatatttgtgat 100  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||            ||||||||||| ||||||||||||||||||||||||||||    
T  49387333 actgaaataccataagaaaataaaatcacgaatttaaacttaaaaatg------------gacaaaaatgatcattattaagcttaaatatatttgtgat 49387246  T
Q  101 ttccgattcttaaggttatgaggtgaatcgagtgaggctgattttaagttctttaatgattctattatattagactaaaaactaccaacaattttctaca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49387245 ttccgattcttaaggttatgaggtgaatcgagtgaggctgattttaagttctttaatgattctattatattagactaaaaactaccaacaattttctaca 49387146  T
Q  201 tcttatttatagg 213  Q
    |||||||||||||    
T  49387145 tcttatttatagg 49387133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 38556116 - 38556178
Alignment:
Q  11 cataagaaaataaagtcatgaat-ttaagcttaaaaatgtatatgaaaatggacaaaaatgac 72  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  38556116 cataagaaaataaaatcatgaatcttaagcttaaaaatgtatatgaaaatggacaaaaatgac 38556178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 41376756 - 41376819
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatga 71  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  41376756 accataagaaaataaaatcatgaattttaagcttaaaaatatatatgaaaatggacaaaaatga 41376819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5748025 - 5747951
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  5748025 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 5747951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 54037012 - 54036940
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  54037012 tgaaagaccataagaaaataaaatcatgaatttgaagcttaaaaattcatatgaaaatggacaaaaaggacca 54036940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 41935659 - 41935730
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacc 73  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  41935659 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacc 41935730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 16020129 - 16020195
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||| ||||| ||||||||||||  |||||||||||||||||||||||||    
T  16020129 accataagaaaataaaatcataaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 16020195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 26842975 - 26843037
Alignment:
Q  12 ataagaaaataaagtcatgaatttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||||||| |||||||||| |||||||||||  ||||||||||||||||||| |||||    
T  26842975 ataagaaaataaaatcatgaattttagcttaaaaattcatatgaaaatggacaaaaaggacca 26843037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52654082 - 52654008
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  |||| |||||||||||||| |||||    
T  52654082 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatataaaaatggacaaaaaggacca 52654008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 16530484 - 16530556
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||| ||||| ||||||||||||  ||||||||||||||||||| |||||    
T  16530484 tgaaagaccataagaaaataaaatcataaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 16530556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22539837 - 22539769
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| |||||||||||||||| ||||||| ||||| |||||||||  |||||||||||||||||||    
T  22539837 actgaaagaccataagaaaataaaatcatgaattttaaccttaaaaattcatatgaaaatggacaaaaa 22539769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 26948150 - 26948221
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacc 73  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||||||  ||||||||||||||||||| ||||    
T  26948150 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacc 26948221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 17362440 - 17362375
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| |||||||||| |  |||||||||||||||||||||||||    
T  17362440 accataagaaaataaaatcatgaattttaagcttaaaattc-atatgaaaatggacaaaaatgacca 17362375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18568175 - 18568101
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| | |||||||||||||| |||||||||| ||||||||||||  ||||||||||| ||||||| |||||    
T  18568175 actgaaagagcataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatgaacaaaaaagacca 18568101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 26886758 - 26886692
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||  ||||||||||||| |||||    
T  26886758 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggagaaaaa 26886692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32922231 - 32922305
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| |||||| |||||| |  ||||||||||||||||||| |||||    
T  32922231 actgaaagaccataagaaaataaaatcatgaattttaagtttaaaatttcatatgaaaatggacaaaaaggacca 32922305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36868182 - 36868108
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  |||||||||| |||||||| |||||    
T  36868182 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatagacaaaaaggacca 36868108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 39792059 - 39791993
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  39792059 accatcagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 39791993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 44551081 - 44551147
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||||||  |||||||||||||||||||    
T  44551081 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaa 44551147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52538029 - 52537955
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| |||||| |||||| |  ||||||||||||||||||| |||||    
T  52538029 actgaaaaaccataagaaaataaaatcatgaattttaagtttaaaatttcatatgaaaatggacaaaaaggacca 52537955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 10993791 - 10993856
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaa 67  Q
    ||||| || ||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||    
T  10993791 tgaaagactataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaa 10993856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 25331965 - 25331893
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||| ||||| || |||||||||  ||||||||||||||||||| |||||    
T  25331965 tgaaagaccataagaaaataaaatcataaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 25331893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 45801358 - 45801294
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  45801358 cataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaagacca 45801294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45655843 - 45655772
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatga 71  Q
    ||||||| |||||||||||||||| |||| ||||| ||||||||||||  |||| |||||||| ||||||||    
T  45655843 actgaaagaccataagaaaataaaatcataaattttaagcttaaaaattcatataaaaatggataaaaatga 45655772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15516477 - 15516543
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||  |||||||||| ||||||||||||  |||||||||| |||||||| |||||    
T  15516477 accataagaaaataagatcatgaattttaagcttaaaaattcatatgaaaatcgacaaaaaggacca 15516543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20984064 - 20984002
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  20984064 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 20984002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 46648217 - 46648151
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||||||  |||||||||| ||||||||    
T  46648217 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatagacaaaaa 46648151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 9902801 - 9902729
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||| || ||||| |||||||||  |||||||||| |||||||| |||||    
T  9902801 tgaaagaccataagaaaataaaatcataaattttaaacttaaaaattcatatgaaaattgacaaaaaggacca 9902729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 35130962 - 35131034
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| | |||||||| || ||||||| |  ||||||||||||||||||| |||||    
T  35130962 tgaaagaccataagaaaataaaattatgaattttaaacttaaaagttcatatgaaaatggacaaaaaggacca 35131034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 39792117 - 39792152
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatga 71  Q
    ||||||||||||||| ||||||||||||||||||||    
T  39792117 aagcttaaaaatgtacatgaaaatggacaaaaatga 39792152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 9902856 - 9902894
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  9902856 aagcttgaaaatgtatataaaaatggacaaaaatgacca 9902894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 16020071 - 16020033
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  16020071 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 16020033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 17362498 - 17362536
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  17362498 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 17362536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 20984114 - 20984152
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  20984114 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 20984152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 22539887 - 22539925
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  22539887 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 22539925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 23572801 - 23572839
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  23572801 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 23572839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 26842914 - 26842876
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  26842914 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 26842876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 32188062 - 32187996
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| ||||| ||||||| |   ||||||||||||||||||    
T  32188062 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaatttcgtatgaaaatggacaaaaa 32187996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 43264271 - 43264309
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  43264271 aagcttgaaaatgtatatgaaaatggacaaaaaagacca 43264309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 44835121 - 44835055
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| ||||||||||| |||| |||| ||||| |||||||||| |  |||||||||||||||||||    
T  44835121 tgaaaaaccataagaaagtaaaatcattaattttaagcttaaaagttcatatgaaaatggacaaaaa 44835055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 15516420 - 15516388
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  15516420 aagcttgaaaatgtatatgaaaatggacaaaaa 15516388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 23572749 - 23572689
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||| |||||||||||||||| ||||||| ||| |||||||||||  ||||| |||||||    
T  23572749 tgaaagaccataagaaaataaaatcatgaattttcagcttaaaaattcatatgtaaatgga 23572689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 24270562 - 24270594
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  24270562 aagcttgaaaatgtatatgaaaatggacaaaaa 24270594  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 31857781 - 31857813
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  31857781 aagcttgaaaatgtatatgaaaatggacaaaaa 31857813  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 32488784 - 32488816
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  32488784 aagcttgaaaatgtatatgaaaatggacaaaaa 32488816  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 37068820 - 37068848
Alignment:
Q  43 aaaatgtatatgaaaatggacaaaaatga 71  Q
    |||||||||||||||||||||||||||||    
T  37068820 aaaatgtatatgaaaatggacaaaaatga 37068848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 46674765 - 46674829
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||| |||| ||||| |||||||||||| |||||||||||| || |||| |||||    
T  46674765 cataaaaaaataaaatcataaattttaagcttaaaaatatatatgaaaatgaaccaaaaggacca 46674829  T

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Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 27065317 - 27065382
Alignment:
Q  9 accataagaaaataaagtcatgaatttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27065317 accataagaaaataaaatcatgaatttaagcttaaaaatgtatatgaaaatgaacaaaaatgacca 27065382  T

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Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 17504209 - 17504281
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  17504209 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 17504281  T

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Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3459799 - 3459873
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||| |  |||||||||||||||||||||||||    
T  3459799 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaatgacca 3459873  T

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Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5618235 - 5618309
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  5618235 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 5618309  T

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Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 16515784 - 16515716
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  16515784 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 16515716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 48524657 - 48524729
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  48524657 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaagacca 48524729  T

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Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 40934560 - 40934494
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  40934560 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 40934494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 50312147 - 50312081
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  50312147 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 50312081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 4695084 - 4695012
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||| ||||||||  ||||||||||||||||||| |||||    
T  4695084 tgaaagaccataagaaaataaaatcatgaattttaagtttaaaaattcatatgaaaatggacaaaaaagacca 4695012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9877553 - 9877485
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  |||||||||||||||||||    
T  9877553 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaa 9877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 12650088 - 12650160
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  |||| ||||||||||||||||||||    
T  12650088 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatataaaaatggacaaaaatgacca 12650160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 45286380 - 45286308
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| || ||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  45286380 tgaaagacgataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 45286308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 1501685 - 1501751
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||||||  |||||||||||||||||||    
T  1501685 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaa 1501751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 8853267 - 8853333
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| |||||||||| |  ||||||||||||||||||| |||||    
T  8853267 accataagaaaataaaatcatgaattttaagcttaaaagttcatatgaaaatggacaaaaaggacca 8853333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 32694450 - 32694384
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||| ||||||||||||||| |||||    
T  32694450 accataagaaaataaaatcatgaattttaagcttaaaaattcatacgaaaatggacaaaaaggacca 32694384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44344188 - 44344262
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||  |||| ||||| || ||||| |||||    
T  44344188 actgaaataccataagaaaataaaatcatgaattttaagcttaaaaattaatataaaaatagataaaaaggacca 44344262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50208509 - 50208435
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| |||||| || ||| | |||||||||||||||||||| |||||    
T  50208509 actgaaagaccataagaaaataaaatcatgaattttaagttttaaattttatatgaaaatggacaaaaaggacca 50208435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 8828745 - 8828810
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaa 67  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||  |||| |||||||||||||    
T  8828745 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatataaaaatggacaaaa 8828810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 48970847 - 48970782
Alignment:
Q  4 gaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||| |||||||| ||||||| |||||||||| || |||||||||||||||||||||||| |||||    
T  48970847 gaaagaccataagtaaataaaatcatgaattttaaacttaaaaatgtatatgaaaatggataaaaa 48970782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 10296764 - 10296824
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  10296764 accataataaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 10296824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34480348 - 34480420
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgac 72  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||  ||||||||    
T  34480348 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatggatcaaaatgac 34480420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 39673002 - 39673074
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||||||  |||||||||| |||||||| |||||    
T  39673002 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatagacaaaaaggacca 39673074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40770290 - 40770222
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| | |||||||||||||| |||||||||| || |||||||||  |||||||||||||||||||    
T  40770290 actgaaagagcataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaa 40770222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 730963 - 731037
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| | |||||||||||||| ||||||| ||||| ||||||| |  ||||||||||||||||||| |||||    
T  730963 actgaaagagcataagaaaataaaatcatgaattttaaacttaaaatttcatatgaaaatggacaaaaaggacca 731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6489036 - 6489098
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  6489036 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 6489098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45315420 - 45315482
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  45315420 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 45315482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26095639 - 26095564
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa--tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||  |||  |||||||| |  ||||||||||||||||||| |||||    
T  26095639 actgaaagaccataagaaaataaaatcatgaattttttcgcttaaaatttcatatgaaaatggacaaaaaggacca 26095564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28554354 - 28554426
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgac 72  Q
    ||||||| |||||||||||||||| ||||||| ||||| |||||||||  ||||| |||||||  ||||||||    
T  28554354 actgaaagaccataagaaaataaaatcatgaattttaatcttaaaaattcatatgtaaatggatcaaaatgac 28554426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 49021814 - 49021743
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||||||| |||| |||||||||| |||| ||||| |  |||||||||||||||||||||||||    
T  49021814 tgaaagaccataagaaattaaaatcatgaattttaagcataaaattc-atatgaaaatggacaaaaatgacca 49021743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25012790 - 25012723
Alignment:
Q  9 accataagaaaataaagtcatgaa-tttaagcttaaaaatgtatat-gaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||  |||||| ||||||| |||||    
T  25012790 accataagaaaataaaatcatgaattttatgcttaaaaatgtatatcaaaaatgaacaaaaaggacca 25012723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 45315376 - 45315333
Alignment:
Q  31 aatttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||    
T  45315376 aatttgagcttgaaaatgtatatgaaaatggataaaaatgacca 45315333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 45569144 - 45569085
Alignment:
Q  11 cataagaaaataaagtcatgaatt-taagcttaaaaatgtatatgaaaatggacaaaaat 69  Q
    |||||||||||||| ||||||||| |||||||||||||  ||||||||| |||| |||||    
T  45569144 cataagaaaataaaatcatgaattataagcttaaaaattcatatgaaaaaggaccaaaat 45569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5586637 - 5586575
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||| |||  ||||| |||||||    
T  5586637 actgaaagaccataagaaaataaaatcatgaattttaagcttaataattcatatgtaaatgga 5586575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 5586687 - 5586725
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  5586687 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 5586725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 6488986 - 6488948
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  6488986 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 6488948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 17191333 - 17191275
Alignment:
Q  17 aaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||| |||||||||| ||||||||||||  |||| |||||||||||||| |||||    
T  17191333 aaaataaaatcatgaattttaagcttaaaaattcatataaaaatggacaaaaaggacca 17191275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 25012848 - 25012886
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  25012848 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 25012886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 26095689 - 26095727
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  26095689 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 26095727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 26874341 - 26874303
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  26874341 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 26874303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 27065259 - 27065221
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  27065259 aagcttgaaaatgtatatgaaaatggacaaaaaagacca 27065221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 27547082 - 27547024
Alignment:
Q  11 cataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||| ||||||| ||||| |||||||||  |||||||| ||||||||||    
T  27547082 cataagaaaataaaatcatgaattttaatcttaaaaattcatatgaaagtggacaaaaa 27547024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 28554304 - 28554266
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  28554304 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 28554266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 32694508 - 32694546
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  32694508 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 32694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 33471611 - 33471649
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  33471611 aagcttgaaaatgtatataaaaatggacaaaaatgacca 33471649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 40934618 - 40934656
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  40934618 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 40934656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 43726371 - 43726437
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| || ||||||||||||| | |||||||| |||||||||| |  |||||||||||||||||||    
T  43726371 tgaaagactataagaaaataaaattatgaattttaagcttaaaagttcatatgaaaatggacaaaaa 43726437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 45286432 - 45286470
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  45286432 aagcttaaaaatgtatataaaaatggacaaaaaagacca 45286470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 46283550 - 46283484
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| || ||||||||||||| ||||||| ||||| |||||||||  ||||||||||| |||||||    
T  46283550 tgaaagacaataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatgaacaaaaa 46283484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 3459749 - 3459716
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaat 69  Q
    |||||| |||||||||||||||||||||||||||    
T  3459749 aagcttgaaaatgtatatgaaaatggacaaaaat 3459716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 5618185 - 5618153
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  5618185 aagcttgaaaatgtatatgaaaatggacaaaaa 5618153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 8641117 - 8641177
Alignment:
Q  9 accataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||||| ||||||| |||||||||||||||  |||| | |||||| |||||    
T  8641117 accataagaaaataaaatcatgaattttaagcttaaaaattcatataataatggataaaaa 8641177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35521384 - 35521432
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaat-ttaagcttaaaaatg 48  Q
    ||||||| |||||||||||||||| |||||||| |||||||| ||||||    
T  35521384 actgaaaaaccataagaaaataaaatcatgaatgttaagcttgaaaatg 35521432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 50208560 - 50208588
Alignment:
Q  40 ttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||||||||||||||||||    
T  50208560 ttaaaaatgtatatgaaaatggacaaaaa 50208588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 9e-23; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26938350 - 26938424
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  26938350 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaactgtatatgaaaatggacaaaaatgacca 26938424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 40277394 - 40277460
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  40277394 accataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatgaacgaaaatgacca 40277460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 29596550 - 29596478
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  29596550 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 29596478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 42684954 - 42685026
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  42684954 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaagacca 42685026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8156858 - 8156784
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  ||||||||||||||||||| |||||    
T  8156858 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaaggacca 8156784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17494887 - 17494961
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  |||| |||||||| |||||||||||    
T  17494887 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatataaaaatggataaaaatgacca 17494961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29726693 - 29726765
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||| ||||| ||||||||||||  ||||||||||||||||||| |||||    
T  29726693 tgaaagaccataagaaaataaaatcataaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 29726765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 36556683 - 36556611
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || ||||||| |  |||||||||||||||||||||||||    
T  36556683 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaagttcatatgaaaatggacaaaaatgacca 36556611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 33279084 - 33279018
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||  ||||||||||||| |||||    
T  33279084 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggaaaaaaa 33279018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39198781 - 39198855
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  |||||||||||||||| || |||||    
T  39198781 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaataaggacca 39198855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 18805893 - 18805822
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||||||  ||||||||||||| |||||||||||    
T  18805893 tgaaagaccataagaaaaaaaa-tcatgaattttaagcttaaaaattcatatgaaaatggataaaaatgacca 18805822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30464064 - 30463992
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgac 72  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||  ||||||||    
T  30464064 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatggatcaaaatgac 30463992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 34199010 - 34199073
Alignment:
Q  12 ataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||||||| |||||||||| ||||||||| ||  ||||||||||||||||||| |||||    
T  34199010 ataagaaaataaaatcatgaattttaagcttaaagattcatatgaaaatggacaaaaaggacca 34199073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1235734 - 1235672
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  1235734 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 1235672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 21660841 - 21660803
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  21660841 aagcttaaaaatgtatatgaaaatggacaaaaaagacca 21660803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21660891 - 21660953
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  21660891 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 21660953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 26938300 - 26938262
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  26938300 aagcttgaaaatgtatatgaaaatggacaaaaatgacca 26938262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27712914 - 27712852
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  27712914 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 27712852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33527104 - 33527178
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  ||||||||||  ||||||| |||||    
T  33527104 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaataaacaaaaacgacca 33527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 40277336 - 40277298
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  40277336 aagcttgaaaatgtatatgaaaatggacaaaaatgacca 40277298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 10925268 - 10925328
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  10925268 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 10925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 148407 - 148369
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  148407 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 148369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 1235784 - 1235822
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  1235784 aagcttgaaaatgtatatgaagatggacaaaaatgacca 1235822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4968174 - 4968236
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  ||||| |||||||    
T  4968174 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaagttcatatgtaaatgga 4968236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9887285 - 9887223
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  ||||| |||||||    
T  9887285 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaagttcatatgtaaatgga 9887223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 27712964 - 27713002
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  27712964 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 27713002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 30253740 - 30253702
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  30253740 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 30253702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30253790 - 30253852
Alignment:
Q  1 actgaaataccataagaaaataaagtcatga-atttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||  |||||||||||||||  ||||| |||||||    
T  30253790 actgaaagaccataagaaaataaaatcatgacttttaagcttaaaaattcatatgtaaatgga 30253852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 34198949 - 34198911
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  34198949 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 34198911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34632375 - 34632313
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| | ||||| |||||||||||||||  ||||| |||||||    
T  34632375 actgaaagaccataagaaaataaaattatgaattttaagcttaaaaattcatatgtaaatgga 34632313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 34632425 - 34632463
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  34632425 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 34632463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28852338 - 28852264
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  28852338 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatggacaaaaaggacca 28852264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2316639 - 2316565
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  2316639 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 2316565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 13178397 - 13178455
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  13178397 cataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatggacaaaaa 13178455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 9546577 - 9546649
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  9546577 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 9546649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 17853809 - 17853881
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  17853809 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 17853881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2863744 - 2863818
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| ||||||||||||| || |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  2863744 actgaaagaccataagaaaattaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 2863818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 20027915 - 20027849
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  20027915 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 20027849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 22568905 - 22568839
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  22568905 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 22568839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 24335673 - 24335611
Alignment:
Q  13 taagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  24335673 taagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 24335611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 1925264 - 1925192
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  1925264 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 1925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 9220251 - 9220179
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  9220251 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 9220179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 13853308 - 13853380
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||| |||||||| |||||    
T  13853308 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatagacaaaaaagacca 13853380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 21926230 - 21926302
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||| ||||||||  ||||||||||||||||||| |||||    
T  21926230 tgaaagaccataagaaaataaaatcatgaattttaagtttaaaaattcatatgaaaatggacaaaaaggacca 21926302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 24325167 - 24325231
Alignment:
Q  12 ataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgaccat 75  Q
    ||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  24325167 ataagaaaataaaatcatgaactttaagcttaaaaattcatatgaaaatggacaaaaaggaccat 24325231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2883047 - 2883121
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||| ||||| ||||||||||||  ||||||||||||| ||||| |||||    
T  2883047 actgaaagaccataagaaaataaaatcattaattttaagcttaaaaattcatatgaaaatggataaaaaggacca 2883121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 3105776 - 3105842
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  3105776 accataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 3105842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8129683 - 8129609
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  ||||||| ||||||||||| |||||    
T  8129683 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaacatggacaaaaaggacca 8129609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 11361937 - 11361871
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||  |||||||||| ||||||||    
T  11361937 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaattgacaaaaa 11361871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 685119 - 685191
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| || |||||||||| || |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  685119 tgaaagactataagaaaatgaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 685191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 3012079 - 3012151
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||||||  |||| ||||||||||||||| ||||    
T  3012079 tgaaaaaccataagaaaataaaatcatgaattttaaacttaaaaattcatataaaaatggacaaaaataacca 3012151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 9899343 - 9899271
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| || ||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  9899343 tgaaagactataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 9899271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12240630 - 12240562
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| || ||||||||| ||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  12240630 actgaaagacaataagaaaacaaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 12240562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 25121663 - 25121735
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| ||||||| ||||| ||||||||   ||||||||||||||||||| |||||    
T  25121663 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaaatcatatgaaaatggacaaaaaggacca 25121735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 1136917 - 1136983
Alignment:
Q  9 accataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| ||||||| ||||| ||||||| |  ||||||||||||||||||| |||||    
T  1136917 accataagaaaataaaatcatgaattttaaacttaaaatttcatatgaaaatggacaaaaaggacca 1136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 2882997 - 2882961
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgac 72  Q
    |||||| ||||||||||||||||||||||||||||||    
T  2882997 aagcttgaaaatgtatatgaaaatggacaaaaatgac 2882961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 3105718 - 3105680
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  3105718 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 3105680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 8129733 - 8129771
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  8129733 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 8129771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 8487976 - 8487938
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  8487976 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 8487938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8488026 - 8488088
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| || ||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  8488026 actgaaagacaataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 8488088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 13178337 - 13178299
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  13178337 aagcttgaaaatgtatatgaaaatggacaaaaaagacca 13178299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 14655276 - 14655314
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  14655276 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 14655314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 22568963 - 22569001
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  22568963 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 22569001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 24896286 - 24896248
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  24896286 aagcttgaaaatgtatatgaaaatgaacaaaaatgacca 24896248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 12240688 - 12240716
Alignment:
Q  43 aaaatgtatatgaaaatggacaaaaatga 71  Q
    |||||||||||||||||||||||||||||    
T  12240688 aaaatgtatatgaaaatggacaaaaatga 12240716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24896336 - 24896408
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgac 72  Q
    ||||||| |||||||||||||||| ||||||| |||||| ||||| ||  ||||| |||||||  ||||||||    
T  24896336 actgaaagaccataagaaaataaaatcatgaattttaagattaaacattcatatgtaaatggatcaaaatgac 24896408  T

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Target: scaffold0024 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 108004 - 107933
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaatttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  108004 tgaaaaaccataagaaaataaaatcatgaatttaagcttaaaaattcatatgaaaatggacaaaaaggacca 107933  T

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Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19104423 - 19104349
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  19104423 actgaaaaaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 19104349  T

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Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 21627082 - 21627009
Alignment:
Q  2 ctgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| || ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  21627082 ctgaaagacaataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatggacaaaaaggacca 21627009  T

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Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45062212 - 45062144
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  45062212 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaatttatatgaaaatggacaaaaa 45062144  T

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Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11682072 - 11681998
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  11682072 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 11681998  T

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Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38495064 - 38494990
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  38495064 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 38494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 7149457 - 7149529
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  7149457 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaagacca 7149529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 23036787 - 23036723
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  23036787 cataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatagacaaaaaggacca 23036723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 34287656 - 34287592
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  34287656 cataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 34287592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 41922448 - 41922520
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  |||||||||||||||||||||||||    
T  41922448 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaatgacca 41922520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 11338034 - 11337968
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  11338034 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 11337968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 12423987 - 12423921
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  12423987 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 12423921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17173261 - 17173327
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  17173261 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 17173327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19124981 - 19124907
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| || ||||| ||||||| |||||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  19124981 actgaaaaactataagtaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatggataaaaaggacca 19124907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 20121347 - 20121281
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  20121347 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 20121281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21733232 - 21733306
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||| ||||||| |  |||||||||||||||||||||||||    
T  21733232 actgaaagaccataagaaaataaaatcatgaattttaaacttaaaatttcatatgaaaatggacaaaaatgacca 21733306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 41857313 - 41857379
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  41857313 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 41857379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43575212 - 43575138
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  ||||||||||||||||||| |||||    
T  43575212 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaaggacca 43575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 44457956 - 44458022
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  44457956 accataagaaaataaaatcatgaattttaagcttaaaaattaatatgaaaatggacaaaaaggacca 44458022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 47221849 - 47221783
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  47221849 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 47221783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 8805910 - 8805982
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  8805910 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 8805982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 8949458 - 8949530
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| |||||||||| |  ||||||||||||||||||| |||||    
T  8949458 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaacttcatatgaaaatggacaaaaaggacca 8949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 21455726 - 21455786
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||    
T  21455726 accataagaaaataaaatcatgatttttaagcttaaaaatgtatatgaaaatgaacaaaaa 21455786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 45055488 - 45055560
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  45055488 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 45055560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 45867585 - 45867521
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  45867585 cataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 45867521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 46426809 - 46426737
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaat-ttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  46426809 tgaaagaccataagaaaataaaaccatgaatattaagcttaaaaattcatatgaaaatggacaaaaaggacca 46426737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 31813877 - 31813806
Alignment:
Q  4 gaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||| |||||||||||||||| |||| ||||| ||||||||||||  ||||||||||||||||||| |||||    
T  31813877 gaaagaccataagaaaataaaatcataaattttaagcttaaaaattcatatgaaaatggacaaaaaagacca 31813806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2699767 - 2699693
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||| ||||| || |||||||||  ||||||||||||||||||| |||||    
T  2699767 actgaaagaccataagaaaataaaatcataaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 2699693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 24331551 - 24331617
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  24331551 accataaaaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 24331617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 32165385 - 32165459
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| | |||||||||||||| |||||||||| ||||||||||||  ||||||||||||| ||||| |||||    
T  32165385 actgaaagagcataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggataaaaaagacca 32165459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42391460 - 42391534
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| |||||| |||||| |  ||||||||||||||||||| |||||    
T  42391460 actgaaagaccataagaaaataaaatcatgaattttaagtttaaaatttcatatgaaaatggacaaaaaggacca 42391534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 46738412 - 46738347
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaa 67  Q
    ||||| |||||||||||||||| ||||||| ||||||||| |||||  ||||||||||||||||||    
T  46738412 tgaaagaccataagaaaataaaatcatgaattttaagctttaaaattcatatgaaaatggacaaaa 46738347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31283318 - 31283388
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatga 71  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| |||||  |||||||||| |||||||||||    
T  31283318 actgaaagaccataagaaaataaaatcatgaattttaagctt-aaaattcatatgaaaatagacaaaaatga 31283388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 41749719 - 41749656
Alignment:
Q  12 ataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||||||| |||||||||| ||| |||||||||||||| |||||| ||||||| |||||    
T  41749719 ataagaaaataaaatcatgaattttaagattaaaaatgtatataaaaatgaacaaaaaggacca 41749656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 2699817 - 2699855
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  2699817 aagcttgaaaatgtatatgaaaatggacaaaaatgacca 2699855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7173081 - 7173019
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  7173081 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 7173019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8522474 - 8522401
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  | ||| ||||||||||||| |||||    
T  8522474 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcaaatg-aaatggacaaaaaggacca 8522401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 21733185 - 21733144
Alignment:
Q  33 tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  21733185 tttaagcttgaaaatgtatatgaaaatggacaaaaaggacca 21733144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 49023726 - 49023654
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||| ||| |||| ||||| || |||||||||  ||||||||||||||||||| |||||    
T  49023726 tgaaagaccataagaaaagaaaatcataaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 49023654  T

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Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 24331493 - 24331458
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatga 71  Q
    |||||| |||||||||||||||||||||||||||||    
T  24331493 aagcttgaaaatgtatatgaaaatggacaaaaatga 24331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 7173131 - 7173169
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  7173131 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 7173169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 8949406 - 8949368
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  8949406 aagcttgaaaatgtatataaaaatggacaaaaatgacca 8949368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 41922396 - 41922358
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  41922396 aagcttaaaaatgtatataaaaatggacaaaaaggacca 41922358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 49114411 - 49114353
Alignment:
Q  17 aaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||| |||||||||| ||||||||||||  |||| |||||||||||||| |||||    
T  49114411 aaaataaaatcatgaattttaagcttaaaaattcatataaaaatggacaaaaaagacca 49114353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 17173203 - 17173171
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  17173203 aagcttgaaaatgtatatgaaaatggacaaaaa 17173171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 20121405 - 20121437
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  20121405 aagcttgaaaatgtatatgaaaatggacaaaaa 20121437  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 38495114 - 38495146
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  38495114 aagcttgaaaatgtatatgaaaatggacaaaaa 38495146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 41857255 - 41857223
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  41857255 aagcttgaaaatgtatatgaaaatggacaaaaa 41857223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 44457898 - 44457866
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  44457898 aagcttgaaaatgtatatgaaaatggacaaaaa 44457866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 45062262 - 45062294
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  45062262 aagcttgaaaatgtatatgaaaatggacaaaaa 45062294  T

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Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 26845062 - 26845128
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  26845062 accataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatggacaaaaaagacca 26845128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 11221134 - 11221070
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgac 72  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  11221134 accataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatgaacaaaaatgac 11221070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 11989681 - 11989753
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  11989681 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaatttatatgaaaatggacaaaaatgacca 11989753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 28843898 - 28843970
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  28843898 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 28843970  T

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Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 44976893 - 44976829
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  44976893 cataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatggataaaaatgacca 44976829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 2862843 - 2862777
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  2862843 accataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatgaacaaaaaggacca 2862777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18678063 - 18677989
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  18678063 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 18677989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 29434473 - 29434539
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  29434473 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 29434539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35747856 - 35747930
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| | |||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  35747856 actgaaagagcataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 35747930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38675131 - 38675057
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||||| |||||    
T  38675131 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaattttatatgaaaatggacaaaaaggacca 38675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 15543165 - 15543234
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatga 71  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  15543165 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatga 15543234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6954161 - 6954229
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| |||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||    
T  6954161 actgaaagaccataagaaaataaaatcatgaattttaagctttaaaatgtatataaaaatggacaaaaa 6954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 20209298 - 20209226
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  20209298 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 20209226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 44664787 - 44664859
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  44664787 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 44664859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 45567556 - 45567484
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||||||||| || |||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  45567556 tgaaagaccataagaaaatgaaatcatgaattttaagcttaaaaatttatatgaaaatggacaaaaaggacca 45567484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 46292748 - 46292820
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  46292748 tgaaagaccataagaaaataaaatcatgaatttcaagcttaaaaattcatatgaaaatggacaaaaaagacca 46292820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 39778426 - 39778355
Alignment:
Q  4 gaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  39778426 gaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaagacca 39778355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 44036852 - 44036918
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||||  |||||||||||||||||||    
T  44036852 tgaaataccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaa 44036918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 45539974 - 45539908
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  |||| ||||||||||||||||||||    
T  45539974 accataagaaaataaaatcatgaattttaagcttaaaaattcatataaaaatggacaaaaatgacca 45539908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 14201968 - 14202028
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  14201968 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 14202028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 21017069 - 21016997
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  21017069 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaagacca 21016997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 27812707 - 27812643
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  27812707 cataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 27812643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 45171720 - 45171660
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  45171720 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 45171660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 53712391 - 53712327
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| | |||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  53712391 cataagaaaataaaataatgaattttaagcttaaaaatgtacatgcaaatggacaaaaatgacca 53712327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 11439967 - 11440038
Alignment:
Q  4 gaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  11439967 gaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 11440038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18461784 - 18461839
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatga 55  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18461784 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaatgtatatga 18461839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 32809296 - 32809230
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||||||| || |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  32809296 accataagaaaatcaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 32809230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15020437 - 15020511
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| | |||||||| ||||| |||||||||| ||||||||||||  | ||||||||||||||||| |||||    
T  15020437 actgaaagatcataagaatataaaatcatgaattttaagcttaaaaattgaaatgaaaatggacaaaaaagacca 15020511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41944040 - 41944102
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| |||| || |||||||||||||||  |||||||||||||    
T  41944040 actgaaagaccataagaaaataaaatcattaattttaagcttaaaaattcatatgaaaatgga 41944102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 44920070 - 44920136
Alignment:
Q  9 accataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| ||||||| ||||| ||| |||||  ||||||||||||||||||| |||||    
T  44920070 accataagaaaataaaatcatgaattttaaacttcaaaattcatatgaaaatggacaaaaaggacca 44920136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 45214519 - 45214453
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| | |||||||| |||||||||| |  ||||||||||||||||||| |||||    
T  45214519 accataagaaaataaaattatgaattttaagcttaaaatttcatatgaaaatggacaaaaaggacca 45214453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 14463263 - 14463198
Alignment:
Q  10 ccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||||||||| | |||||||| || |||||||||  ||||||||||||||||||| |||||    
T  14463263 ccataagaaaataaaataatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 14463198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31574403 - 31574356
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaat 47  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  31574403 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaat 31574356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 14201910 - 14201872
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  14201910 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 14201872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18168918 - 18168992
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| || ||||||||||||| ||||||| |||||||||||||||  |||| ||||| || ||||| |||||    
T  18168918 actgaaagactataagaaaataaaatcatgaattttaagcttaaaaattcatataaaaatagataaaaaggacca 18168992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25061442 - 25061377
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||| ||| | |||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  25061442 accataagaaaaaaaatt-atgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 25061377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 36546217 - 36546179
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  36546217 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 36546179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 36562097 - 36562135
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  36562097 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 36562135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 38675181 - 38675219
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  38675181 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 38675219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 39778479 - 39778517
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  39778479 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 39778517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 41943990 - 41943952
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  41943990 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 41943952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 44920012 - 44919974
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  44920012 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 44919974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 45171778 - 45171816
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  45171778 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 45171816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 49002435 - 49002473
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  49002435 aagcttgaaaatgtatataaaaatggacaaaaatgacca 49002473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 35415439 - 35415480
Alignment:
Q  33 tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||| |||||||||||||||||||||| ||| |||||    
T  35415439 tttaagcttgaaaatgtatatgaaaatggacagaaaggacca 35415480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 43378278 - 43378217
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggac 63  Q
    ||||| ||||||| |||||||| |||||||||| || |||||||||  ||||||||||||||    
T  43378278 tgaaagaccataaaaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggac 43378217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 49002383 - 49002313
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||    ||||||||||||||||||| |||||    
T  49002383 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaatc--atatgaaaatggacaaaaaggacca 49002313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 14626250 - 14626218
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  14626250 aagcttgaaaatgtatatgaaaatggacaaaaa 14626218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 25061500 - 25061532
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  25061500 aagcttgaaaatgtatatgaaaatggacaaaaa 25061532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 14871900 - 14871972
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  14871900 tgaaaaaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 14871972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 1099040 - 1098968
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||   |||||||||||||||||||||||||    
T  1099040 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaaatcatatgaaaatggacaaaaatgacca 1098968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 3974361 - 3974289
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||| ||||||||| ||||||||||||||||||| |||||    
T  3974361 tgaaagaccataagaaaataaaatcatgaattttaagtttaaaaatgcatatgaaaatggacaaaaaggacca 3974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 40952234 - 40952306
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  40952234 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 40952306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 16736969 - 16737040
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacc 73  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  16736969 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaagacc 16737040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1643689 - 1643615
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||| ||||| ||||||||||||  ||||||||||||||||||| |||||    
T  1643689 actgaaagaccataagaaaataaaatcataaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 1643615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12854725 - 12854651
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  ||||||||||||||||||| |||||    
T  12854725 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaaggacca 12854651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19131020 - 19130946
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaatttaa-gcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||| ||| ||||||||||  ||||||||||||||||||| |||||    
T  19131020 actgaaagaccataagaaaataaaatcatgaatataaagcttaaaaattcatatgaaaatggacaaaaaggacca 19130946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 30129645 - 30129711
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||||    
T  30129645 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatagacaaaaatgacca 30129711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31618317 - 31618243
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||| ||||| ||| ||||||||||||||||||||| ||||| |||||||    
T  31618317 actgaaagaccataagaaaataaaatcataaattttaagtttaaaaatgtatatgaaaatgaacaaagatgacca 31618243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 2426395 - 2426467
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  2426395 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 2426467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19984424 - 19984492
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| ||| |||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  19984424 actgaaagaccgtaagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 19984492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24858567 - 24858635
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||||||||||| |||||    
T  24858567 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggaaaaaaa 24858635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 33429699 - 33429771
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||| ||  ||||||||||||||||||| |||||    
T  33429699 tgaaagaccataagaaaataaaatcatgaattttaagcttaaacattcatatgaaaatggacaaaaaggacca 33429771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 37943691 - 37943763
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| || ||||||||||||| |||||||||| || |||||||||  |||||||||||||||||||||||||    
T  37943691 tgaaagactataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaatgacca 37943763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 2961041 - 2960970
Alignment:
Q  4 gaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||  |||| |||||||||||||| |||||    
T  2961041 gaaagaccataagaaaataaaatcatgaattttaagcttaaaaattaatataaaaatggacaaaaaggacca 2960970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 2969509 - 2969438
Alignment:
Q  4 gaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||  |||| |||||||||||||| |||||    
T  2969509 gaaagaccataagaaaataaaatcatgaattttaagcttaaaaattaatataaaaatggacaaaaaggacca 2969438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2467209 - 2467135
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  |||||||||| |||||||| |||||    
T  2467209 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatcgacaaaaaggacca 2467135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 3279336 - 3279270
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||||||  |||||||||||||||||||    
T  3279336 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaa 3279270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 13455848 - 13455914
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||| ||||| |||||    
T  13455848 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggataaaaaggacca 13455914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 40881579 - 40881538
Alignment:
Q  33 tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  40881579 tttaagcttgaaaatgtatatgaaaatggacaaaaatgacca 40881538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 13697466 - 13697394
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||| |||||||| |||||||||| ||||||||||||  |||||||||| |||||||| |||||    
T  13697466 tgaaagaccataaaaaaataaaatcatgaattttaagcttaaaaattcatatgaaaattgacaaaaaggacca 13697394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 31486105 - 31486033
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| || ||||||||||||| |||||||||| ||||||||||||  |||||||| |||||||||| |||||    
T  31486105 tgaaagacgataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaattggacaaaaaagacca 31486033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 32772139 - 32772067
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| ||||||| |||||  ||||||||  ||||||||||||||||||| |||||    
T  32772139 tgaaagaccataagaaaataaaatcatgaattttaaagttaaaaattcatatgaaaatggacaaaaaggacca 32772067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 42610953 - 42611009
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggaca 64  Q
    |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||    
T  42610953 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggaca 42611009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7601743 - 7601676
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaa 67  Q
    ||||||| || ||||||||||||| |||||||||| |||||||||| |  ||||||||||||||||||    
T  7601743 actgaaagacgataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaa 7601676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 22621189 - 22621134
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggac 63  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  22621189 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggac 22621134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 6540127 - 6540073
Alignment:
Q  9 accataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    |||||||||||||||| ||||||| |||||||||||||||  |||||||||||||    
T  6540127 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatgga 6540073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 19984374 - 19984336
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  19984374 aagcttgaaaatgtatatgaaaatggacaaaaatgacca 19984336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37092329 - 37092267
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  37092329 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 37092267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 13577411 - 13577341
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||| ||  |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  13577411 tgaaagaccataagaaaaaaa--tcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 13577341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5239442 - 5239510
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||  ||||| | |||||| ||||    
T  5239442 actgaaataccataagaaaataaaatcatgaattttaagtttaaaaattcatatgtagatggaccaaaa 5239510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7610413 - 7610345
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||  ||||||||||||| ||||||| ||||||||| |||||  |||| ||||||||||||||    
T  7610413 actgaaatagtataagaaaataaaatcatgaattttaagcttgaaaattcatataaaaatggacaaaaa 7610345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8357229 - 8357301
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgac 72  Q
    ||||||| || ||||||||||||| ||||||| |||||||||||||||  ||||| |||||||  ||||||||    
T  8357229 actgaaagacaataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatggatcaaaatgac 8357301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 34159318 - 34159259
Alignment:
Q  10 ccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||| |||| || |||||    
T  34159318 ccataagaaaataaagtcatgaatttgaagcttaaaaattcatatgcaaatagataaaaa 34159259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 1643739 - 1643777
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  1643739 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 1643777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 7601793 - 7601831
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  7601793 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 7601831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 14729646 - 14729684
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  14729646 aagcttgaaaatgtatatgaaaatggacaaaaaagacca 14729684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 37092379 - 37092417
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  37092379 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 37092417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 5239392 - 5239360
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  5239392 aagcttgaaaatgtatatgaaaatggacaaaaa 5239360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 19131070 - 19131102
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  19131070 aagcttgaaaatgtatatgaaaatggacaaaaa 19131102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 22621247 - 22621279
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  22621247 aagcttgaaaatgtatatgaaaatggacaaaaa 22621279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 30129588 - 30129556
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  30129588 aagcttgaaaatgtatatgaaaatggacaaaaa 30129556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 33381595 - 33381666
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| || ||||||||||||| ||||||| ||||||| | |||||  ||||||||||||||||||| |||||    
T  33381595 tgaaagactataagaaaataaaatcatgaattttaagcat-aaaattcatatgaaaatggacaaaaaggacca 33381666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 39589776 - 39589808
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  39589776 aagcttgaaaatgtatatgaaaatggacaaaaa 39589808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 42610895 - 42610863
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  42610895 aagcttgaaaatgtatatgaaaatggacaaaaa 42610863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 341486 - 341550
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  341486 cataagaaaataaaatcatgaattttaagcttaaaaatgtatatgaaaatggacaaaaaggacca 341550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42950669 - 42950595
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  42950669 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 42950595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44490454 - 44490380
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||||| |||||    
T  44490454 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaattttatatgaaaatggacaaaaaggacca 44490380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 9027191 - 9027263
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaatt-taagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||||||| |||||    
T  9027191 tgaaagaccataagaaaataaaatcatgaattctaagcttaaaaattcatatgaaaatggacaaaaaggacca 9027263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 11724783 - 11724855
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  11724783 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 11724855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 19079433 - 19079497
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| |||||    
T  19079433 cataagaaaataaaatcatgaatttcaagcataaaaatgtatatgaaaatggacaaaaaagacca 19079497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 23926539 - 23926467
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||| |||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  23926539 tgaaagaccataaaaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaatgacca 23926467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 31556895 - 31556823
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||| ||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  31556895 tgaaagaccataagtaaataaaatcatgaattttaagcttaaaaatttatatgaaaatggacaaaaaggacca 31556823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33274547 - 33274479
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  33274547 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 33274479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 1650651 - 1650585
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  1650651 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 1650585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 10192233 - 10192167
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  10192233 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 10192167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11122794 - 11122720
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||| |||||||||||  ||| |||||||||||||||||||||    
T  11122794 actgaaagaccataagaaaataaaatcatgaattttgagcttaaaaattcatacgaaaatggacaaaaatgacca 11122720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 11723878 - 11723944
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  |||| ||||||||||||||||||||    
T  11723878 accataagaaaataaaatcatgaattttaagcttaaaaattcatataaaaatggacaaaaatgacca 11723944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 3322136 - 3322072
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||||||| |||||    
T  3322136 cataagaaaataaaatcatgaattttaagctcaaaaatgtatatgaaaatgaacaaaaaggacca 3322072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 9912060 - 9911988
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  9912060 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 9911988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 17549217 - 17549145
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  17549217 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaaggacca 17549145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 22196063 - 22195999
Alignment:
Q  11 cataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  22196063 cataagaaagtaaaatcatgaattttaagtttaaaaatgtatataaaaatggacaaaaatgacca 22195999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 26499577 - 26499649
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| |||||||||| || ||||||| |  |||||||||||||||||||||||||    
T  26499577 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaagttcatatgaaaatggacaaaaatgacca 26499649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 29421841 - 29421769
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||||| |||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  29421841 tgaaagaccataagagaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 29421769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 1270257 - 1270191
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||  ||||||||||| |||||||    
T  1270257 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatgaacaaaaa 1270191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13421238 - 13421312
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| | |||||||||||||| |||||||||| ||||||||||||  |||| |||||||||||||| |||||    
T  13421238 actgaaagatcataagaaaataaaatcatgaattttaagcttaaaaattcatataaaaatggacaaaaaggacca 13421312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28789031 - 28789105
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||| |  || |||||||||||||||| |||||    
T  28789031 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatttgaaaatggacaaaaaggacca 28789105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 35412019 - 35411953
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| |||||||||| |  ||||||||||||||||||| |||||    
T  35412019 accataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaaggacca 35411953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 40657442 - 40657376
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| |||||||||| |  ||||||||||||||||||| |||||    
T  40657442 accataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaaggacca 40657376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 29175072 - 29175000
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||| |||||||  |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  29175072 tgaaagaccataaaaaaataatatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 29175000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 30488246 - 30488318
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||| |||||||||| |||||||||| ||| ||||||||  ||||||||||||||||||| |||||    
T  30488246 tgaaagaccatgagaaaataaaatcatgaattttaagattaaaaattcatatgaaaatggacaaaaaagacca 30488318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 42030687 - 42030615
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||| |||||||| |||||||||| |||||||||| |  ||||||||||||||||||| |||||    
T  42030687 tgaaagaccataaaaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaaggacca 42030615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 3889038 - 3889109
Alignment:
Q  4 gaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||| ||||| |||||||||| |||||||||| ||| |||||||| ||||||||||| |||||||| |||||    
T  3889038 gaaagaccatgagaaaataaaatcatgaattttaagattaaaaatttatatgaaaatagacaaaaaggacca 3889109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 16350758 - 16350832
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagctt--aaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||||||||| |||| || |||||||||  ||||||  ||||||||||||||||||| |||||    
T  16350758 tgaaataccataagaaaataaaatcataaattttaagcttaaaaaaattcatatgaaaatggacaaaaaggacca 16350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2450238 - 2450176
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||  ||||| |||||||    
T  2450238 actgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgtaaatgga 2450176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 11723820 - 11723782
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  11723820 aagcttgaaaatgtatatgaaaatggacaaaaatgacca 11723782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 15461397 - 15461331
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||||||||| || | |||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  15461397 accataagaaaattaaattatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 15461331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18449525 - 18449591
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||| ||||| |||||||||| |  ||||||||||||||||||| |||||    
T  18449525 accataagaaaataaaatcataaattttaagcttaaaatttcatatgaaaatggacaaaaaggacca 18449591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 341426 - 341388
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  341426 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 341388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 2450288 - 2450326
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  2450288 aagcttgaaaatgtatatgaaaatggacaaaaaagacca 2450326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 3322193 - 3322231
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  3322193 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 3322231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10714158 - 10714096
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatgga 62  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||| |||  ||||| |||||||    
T  10714158 actgaaagaccataagaaaataaaatcatgaattttaagcttaataattcatatgtaaatgga 10714096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 10714208 - 10714246
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  10714208 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 10714246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 16350706 - 16350668
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  16350706 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 16350668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 22196123 - 22196161
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  22196123 aagcttgaaaatgtatatgaaaatggacaaaaaagacca 22196161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22899183 - 22899257
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| |||||||||||||||| |||| || ||||| ||||||| |  ||||||||||  |||||||||||||    
T  22899183 actgaaagaccataagaaaataaaatcataaattttaaacttaaaatttcatatgaaaataaacaaaaatgacca 22899257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 35412077 - 35412115
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  35412077 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 35412115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 40657500 - 40657538
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  40657500 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 40657538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 42030739 - 42030777
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  42030739 aagctaaaaaatgtatatgaaaatggacaaaaaggacca 42030777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1479177 - 1479110
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||||| ||||||| |||| ||| |||||||||| ||||||||||||  |||||||||| ||||||||    
T  1479177 actgaaagaccataaaaaaaaaaa-tcatgaattttaagcttaaaaattcatatgaaaatagacaaaaa 1479110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 13421181 - 13421153
Alignment:
Q  43 aaaatgtatatgaaaatggacaaaaatga 71  Q
    |||||||||||||||||||||||||||||    
T  13421181 aaaatgtatatgaaaatggacaaaaatga 13421153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 4528 - 4594
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||    
T  4528 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaa 4594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 4476 - 4438
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  4476 aagcttaaaaatgtatataaaaatggacaaaaaggacca 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 73523 - 73449
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||||| || ||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  73523 actgaaagactataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaagacca 73449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 73573 - 73611
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  73573 aagcttgaaaatgtatatgaaaatggacaaaaaggacca 73611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 258897 - 258831
Alignment:
Q  9 accataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  258897 accataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatggacaaaaaggacca 258831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 323576 - 323503
Alignment:
Q  2 ctgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    |||||| |||||||||||||||| |||||||||| |||||||||| |  ||||||||||||||||||| |||||    
T  323576 ctgaaagaccataagaaaataaaatcatgaattttaagcttaaaatttcatatgaaaatggacaaaaaagacca 323503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 323613 - 323645
Alignment:
Q  36 aagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    |||||| ||||||||||||||||||||||||||    
T  323613 aagcttgaaaatgtatatgaaaatggacaaaaa 323645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 41445 - 41511
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||  ||||||||||| |||||||    
T  41445 tgaaagaccataagaaaataaaatcatgaattttaagcttaaaaattcatatgaaaatgaacaaaaa 41511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 10085 - 10151
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaa 68  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||||||  |||||||||||||||||||    
T  10085 tgaaagaccataagaaaataaaatcatgaattttaaacttaaaaattcatatgaaaatggacaaaaa 10151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 257842 - 257777
Alignment:
Q  1 actgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaa 65  Q
    ||||||| |||||||||||||||| | |||||||| ||||||||||||  ||||||||||||||||    
T  257842 actgaaagaccataagaaaataaaattatgaattttaagcttaaaaattcatatgaaaatggacaa 257777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 8536 - 8464
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaa-tttaagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
    ||||| |||||||||||||||| ||||||| |||||  |||||| | |||||||||||||||||||| |||||    
T  8536 tgaaagaccataagaaaataaaatcatgaattttaattttaaaattttatatgaaaatggacaaaaaggacca 8464  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 45018 - 44946
Alignment:
Q  3 tgaaataccataagaaaataaagtcatgaattt-aagcttaaaaatgtatatgaaaatggacaaaaatgacca 74  Q
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T  45018 tgaaagaccataagaaaaaaaaattatgaattttaaatttaaaaattcatatgaaaatggacaaaaaggacca 44946  T

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