View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19590_low_4 (Length: 553)

Name: NF19590_low_4
Description: NF19590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19590_low_4
NF19590_low_4
[»] chr3 (44 HSPs)
chr3 (194-421)||(7158400-7158627)
chr3 (18-196)||(7158837-7159015)
chr3 (418-518)||(49607410-49607510)
chr3 (422-518)||(53982011-53982107)
chr3 (422-518)||(33644200-33644296)
chr3 (427-518)||(52629305-52629396)
chr3 (420-518)||(27714895-27714993)
chr3 (420-518)||(54868899-54868997)
chr3 (417-518)||(31456684-31456785)
chr3 (422-518)||(8076393-8076489)
chr3 (420-498)||(11095377-11095455)
chr3 (421-518)||(17470404-17470501)
chr3 (426-518)||(48587095-48587187)
chr3 (420-518)||(33118855-33118953)
chr3 (419-507)||(36707439-36707527)
chr3 (422-518)||(26141536-26141632)
chr3 (421-518)||(9562998-9563095)
chr3 (427-516)||(26754700-26754789)
chr3 (422-518)||(51419364-51419460)
chr3 (421-518)||(24699958-24700055)
chr3 (418-518)||(11347926-11348026)
chr3 (422-518)||(14623843-14623939)
chr3 (426-516)||(30801739-30801829)
chr3 (420-518)||(41189768-41189866)
chr3 (421-518)||(35536625-35536722)
chr3 (422-518)||(20764919-20765015)
chr3 (422-518)||(47531865-47531961)
chr3 (423-518)||(13898059-13898154)
chr3 (416-490)||(8956756-8956830)
chr3 (420-516)||(11907369-11907465)
chr3 (421-484)||(36331416-36331479)
chr3 (422-516)||(41080709-41080801)
chr3 (422-487)||(45058588-45058652)
chr3 (420-490)||(35965806-35965876)
chr3 (421-516)||(48375712-48375807)
chr3 (425-518)||(25407151-25407245)
chr3 (444-518)||(36331333-36331407)
chr3 (421-491)||(21746212-21746284)
chr3 (449-492)||(52629951-52629993)
chr3 (420-487)||(1758491-1758560)
chr3 (427-508)||(42823116-42823197)
chr3 (449-490)||(53581793-53581833)
chr3 (450-490)||(40480874-40480913)
chr3 (417-445)||(48587014-48587042)
[»] chr2 (38 HSPs)
chr2 (422-518)||(17473020-17473116)
chr2 (421-518)||(7465739-7465836)
chr2 (418-518)||(33436104-33436204)
chr2 (420-518)||(9058478-9058576)
chr2 (421-518)||(5574492-5574589)
chr2 (425-518)||(28863458-28863551)
chr2 (420-518)||(10249386-10249484)
chr2 (421-518)||(32505652-32505749)
chr2 (422-518)||(13438343-13438439)
chr2 (420-518)||(30915461-30915559)
chr2 (422-518)||(40701478-40701574)
chr2 (425-518)||(19930824-19930917)
chr2 (422-518)||(4060685-4060781)
chr2 (418-518)||(20700811-20700911)
chr2 (422-518)||(27864704-27864800)
chr2 (422-518)||(28381659-28381755)
chr2 (418-518)||(38273146-38273246)
chr2 (422-518)||(40613906-40614002)
chr2 (419-501)||(38882835-38882916)
chr2 (419-516)||(26891510-26891607)
chr2 (421-490)||(33436210-33436279)
chr2 (418-518)||(42257189-42257289)
chr2 (421-518)||(2533123-2533219)
chr2 (421-514)||(36168835-36168928)
chr2 (423-518)||(41575138-41575234)
chr2 (422-518)||(43490121-43490217)
chr2 (422-516)||(17820010-17820104)
chr2 (416-518)||(45097739-45097841)
chr2 (417-487)||(13365346-13365418)
chr2 (428-516)||(3439985-3440073)
chr2 (422-518)||(38732354-38732450)
chr2 (440-518)||(2997491-2997569)
chr2 (420-491)||(17823782-17823853)
chr2 (465-516)||(3737986-3738037)
chr2 (420-487)||(15428775-15428842)
chr2 (449-490)||(16096873-16096913)
chr2 (449-490)||(42849794-42849834)
chr2 (472-516)||(3154193-3154237)
[»] chr1 (36 HSPs)
chr1 (419-518)||(2581912-2582011)
chr1 (421-518)||(51898687-51898784)
chr1 (422-518)||(9474880-9474976)
chr1 (422-518)||(47452324-47452420)
chr1 (416-518)||(38595148-38595250)
chr1 (422-518)||(3000319-3000415)
chr1 (422-518)||(48716286-48716382)
chr1 (420-518)||(38632325-38632423)
chr1 (417-518)||(8346392-8346493)
chr1 (422-518)||(27564739-27564835)
chr1 (421-518)||(41758804-41758901)
chr1 (421-518)||(50630457-50630554)
chr1 (419-518)||(32813244-32813343)
chr1 (425-518)||(44548380-44548473)
chr1 (422-518)||(37649198-37649294)
chr1 (422-518)||(43132-43228)
chr1 (420-518)||(26274430-26274528)
chr1 (429-518)||(26440741-26440830)
chr1 (423-515)||(11152385-11152476)
chr1 (416-518)||(5959004-5959106)
chr1 (452-516)||(13414791-13414855)
chr1 (422-518)||(50591004-50591100)
chr1 (419-490)||(23597123-23597194)
chr1 (427-518)||(44453984-44454075)
chr1 (420-518)||(49811531-49811629)
chr1 (420-516)||(45044566-45044662)
chr1 (449-516)||(48489328-48489394)
chr1 (421-518)||(37926442-37926539)
chr1 (422-487)||(41608528-41608593)
chr1 (422-512)||(47748443-47748532)
chr1 (422-518)||(3302537-3302633)
chr1 (453-517)||(44334175-44334239)
chr1 (449-511)||(750240-750301)
chr1 (449-490)||(4401453-4401493)
chr1 (449-490)||(7447950-7447990)
chr1 (449-490)||(50448195-50448235)
[»] chr5 (35 HSPs)
chr5 (421-518)||(2740273-2740370)
chr5 (417-518)||(18520888-18520989)
chr5 (417-518)||(14831809-14831910)
chr5 (422-518)||(33149642-33149738)
chr5 (420-518)||(36732946-36733044)
chr5 (418-518)||(13811648-13811748)
chr5 (422-518)||(35785199-35785295)
chr5 (422-518)||(40145407-40145503)
chr5 (422-518)||(42414306-42414402)
chr5 (18-178)||(4866987-4867159)
chr5 (422-518)||(35943896-35943992)
chr5 (197-311)||(4866635-4866751)
chr5 (422-518)||(28177775-28177871)
chr5 (418-518)||(31008984-31009084)
chr5 (420-518)||(15409614-15409712)
chr5 (417-518)||(36875616-36875708)
chr5 (422-518)||(26720516-26720612)
chr5 (422-518)||(26990265-26990361)
chr5 (421-516)||(6679697-6679792)
chr5 (419-518)||(3921269-3921368)
chr5 (421-518)||(2252172-2252269)
chr5 (421-513)||(41470425-41470517)
chr5 (422-518)||(20073520-20073616)
chr5 (420-485)||(39688934-39688999)
chr5 (422-490)||(33825356-33825424)
chr5 (427-485)||(10356639-10356698)
chr5 (419-518)||(38296200-38296299)
chr5 (422-518)||(6260005-6260101)
chr5 (470-514)||(31132392-31132436)
chr5 (423-490)||(16327902-16327969)
chr5 (114-180)||(4813845-4813913)
chr5 (420-488)||(9603811-9603879)
chr5 (466-516)||(21370048-21370098)
chr5 (417-445)||(16115245-16115273)
chr5 (417-445)||(33149551-33149579)
[»] chr4 (38 HSPs)
chr4 (417-518)||(50052432-50052533)
chr4 (422-518)||(6034044-6034140)
chr4 (420-518)||(48183053-48183151)
chr4 (417-518)||(480451-480552)
chr4 (422-518)||(11511466-11511562)
chr4 (421-518)||(29234249-29234346)
chr4 (417-518)||(42044371-42044472)
chr4 (422-518)||(41236347-41236443)
chr4 (420-516)||(24995113-24995209)
chr4 (414-518)||(29239878-29239982)
chr4 (422-518)||(54473537-54473633)
chr4 (422-515)||(50526178-50526271)
chr4 (422-518)||(3481654-3481750)
chr4 (420-518)||(23608233-23608331)
chr4 (422-518)||(31910192-31910288)
chr4 (422-518)||(40574779-40574875)
chr4 (408-518)||(19670720-19670830)
chr4 (420-518)||(29977883-29977981)
chr4 (420-487)||(55475189-55475256)
chr4 (427-514)||(53352574-53352660)
chr4 (420-518)||(29547963-29548061)
chr4 (460-518)||(41823920-41823978)
chr4 (421-518)||(47986207-47986304)
chr4 (421-518)||(50813896-50813993)
chr4 (420-487)||(32766956-32767023)
chr4 (440-518)||(17983747-17983825)
chr4 (420-490)||(47104542-47104612)
chr4 (422-487)||(55079749-55079814)
chr4 (422-487)||(8343198-8343263)
chr4 (421-518)||(28480272-28480369)
chr4 (421-518)||(28481147-28481244)
chr4 (421-518)||(28482022-28482119)
chr4 (420-516)||(48647732-48647828)
chr4 (430-485)||(29589777-29589831)
chr4 (448-511)||(33703245-33703307)
chr4 (421-487)||(44536781-44536846)
chr4 (422-487)||(18924530-18924595)
chr4 (454-495)||(18769141-18769182)
[»] chr7 (40 HSPs)
chr7 (420-518)||(7389387-7389485)
chr7 (421-518)||(3434561-3434658)
chr7 (420-518)||(8080387-8080485)
chr7 (425-518)||(3783998-3784091)
chr7 (421-518)||(36361917-36362014)
chr7 (413-518)||(38837208-38837313)
chr7 (422-518)||(4999518-4999614)
chr7 (422-518)||(38267040-38267136)
chr7 (419-518)||(40957704-40957803)
chr7 (420-518)||(19436191-19436289)
chr7 (417-518)||(35137528-35137629)
chr7 (421-518)||(36362025-36362122)
chr7 (422-518)||(19329842-19329938)
chr7 (423-518)||(32951497-32951592)
chr7 (425-518)||(3694370-3694463)
chr7 (413-518)||(8238203-8238309)
chr7 (422-516)||(46374808-46374902)
chr7 (427-518)||(35522881-35522972)
chr7 (422-516)||(21234401-21234495)
chr7 (420-518)||(38044195-38044293)
chr7 (420-516)||(36208171-36208267)
chr7 (421-487)||(22343360-22343426)
chr7 (417-483)||(35468894-35468960)
chr7 (419-488)||(10343597-10343666)
chr7 (421-518)||(41915740-41915837)
chr7 (419-518)||(11044185-11044274)
chr7 (418-518)||(18207176-18207275)
chr7 (421-514)||(46033809-46033902)
chr7 (422-514)||(41423682-41423774)
chr7 (417-518)||(7727901-7728002)
chr7 (452-517)||(16374829-16374894)
chr7 (422-487)||(32564461-32564526)
chr7 (422-511)||(40846124-40846213)
chr7 (422-490)||(39255955-39256023)
chr7 (422-518)||(31735884-31735973)
chr7 (421-513)||(26296643-26296735)
chr7 (456-516)||(27744315-27744375)
chr7 (417-491)||(45223037-45223111)
chr7 (427-501)||(2318264-2318338)
chr7 (449-490)||(32029752-32029792)
[»] chr8 (34 HSPs)
chr8 (416-517)||(504126-504227)
chr8 (421-518)||(37038478-37038575)
chr8 (422-518)||(12831047-12831143)
chr8 (422-518)||(15197333-15197429)
chr8 (422-518)||(34012300-34012396)
chr8 (420-518)||(14547920-14548018)
chr8 (417-518)||(5957825-5957926)
chr8 (422-518)||(1179944-1180040)
chr8 (422-518)||(23122601-23122697)
chr8 (422-518)||(40423947-40424043)
chr8 (416-518)||(43414585-43414687)
chr8 (419-518)||(10284635-10284734)
chr8 (421-514)||(44507095-44507188)
chr8 (427-518)||(10621091-10621182)
chr8 (422-518)||(15048186-15048281)
chr8 (441-518)||(8841436-8841513)
chr8 (417-518)||(16383372-16383473)
chr8 (423-518)||(9122196-9122281)
chr8 (420-487)||(34307214-34307281)
chr8 (420-518)||(4854867-4854965)
chr8 (420-516)||(15258935-15259031)
chr8 (422-490)||(20074966-20075034)
chr8 (417-485)||(24307624-24307692)
chr8 (420-518)||(24307797-24307895)
chr8 (417-487)||(30479509-30479579)
chr8 (422-501)||(14055613-14055692)
chr8 (420-518)||(42221513-42221611)
chr8 (417-518)||(16056405-16056506)
chr8 (421-518)||(32032724-32032820)
chr8 (421-511)||(17443824-17443914)
chr8 (417-516)||(38229424-38229522)
chr8 (449-511)||(2547100-2547161)
chr8 (449-511)||(29705466-29705527)
chr8 (417-445)||(34012209-34012237)
[»] chr6 (24 HSPs)
chr6 (422-518)||(32869678-32869774)
chr6 (425-518)||(22880662-22880755)
chr6 (421-518)||(11427615-11427714)
chr6 (417-518)||(17598549-17598650)
chr6 (422-518)||(29857827-29857923)
chr6 (419-518)||(6209469-6209568)
chr6 (413-518)||(23128131-23128236)
chr6 (422-518)||(31109404-31109500)
chr6 (413-511)||(15832568-15832666)
chr6 (421-518)||(31976247-31976344)
chr6 (419-518)||(30341364-30341463)
chr6 (420-518)||(15990046-15990144)
chr6 (418-518)||(31110765-31110863)
chr6 (422-518)||(15508028-15508124)
chr6 (416-518)||(946370-946472)
chr6 (426-518)||(28536492-28536582)
chr6 (422-487)||(31953065-31953130)
chr6 (417-516)||(12732477-12732576)
chr6 (427-516)||(9379718-9379807)
chr6 (422-518)||(4231548-4231644)
chr6 (421-487)||(22422053-22422119)
chr6 (449-490)||(7367674-7367714)
chr6 (449-490)||(26669944-26669984)
chr6 (417-445)||(32869837-32869865)
[»] scaffold0237 (1 HSPs)
scaffold0237 (422-518)||(4029-4125)
[»] scaffold0321 (1 HSPs)
scaffold0321 (413-518)||(10113-10218)
[»] scaffold1268 (1 HSPs)
scaffold1268 (422-518)||(933-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (422-518)||(933-1029)
[»] scaffold0018 (1 HSPs)
scaffold0018 (438-511)||(152514-152587)
[»] scaffold0110 (1 HSPs)
scaffold0110 (422-512)||(8873-8963)
[»] scaffold0316 (1 HSPs)
scaffold0316 (451-516)||(17083-17148)
[»] scaffold0119 (1 HSPs)
scaffold0119 (449-490)||(810-850)


Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 194 - 421
Target Start/End: Complemental strand, 7158627 - 7158400
Alignment:
Q  194 atgcaaacatagcagaaataatgagcagaatatatcaagctactccattccatgttgtcaatggattcggatttcctacaatcacaattcaacacattca 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7158627 atgcaaacatagcagaaataatgagcagaatatatcaagctactccattccatgttgtcaatggatttggatttcctacaatcacaattcaacacattca 7158528  T
Q  294 cacaattattaaattggttgttcttgtcatggtcggatgatgcatattttacctatgtttgagagttaaatagaaaaattcaaataacttgcgttattga 393  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7158527 cacaattattaaattggttgttcttgtcatggttggatgatgcatattttacctatgtttgagagttaaatagaaaaattcaaataacttgcgttattga 7158428  T
Q  394 atggattccaatacaaaggttttaaaaa 421  Q
    ||||||||||||||||||||||||||||    
T  7158427 atggattccaatacaaaggttttaaaaa 7158400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 7159015 - 7158837
Alignment:
Q  18 attcttatattgtcgttgttgttgtcagaaacttctaaattcccaaacaaggatacaatttcaaattgaccctataacagaaaaaggcatcattgcaaga 117  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7159015 attcttatattgtcgctgttgttgtcataaacttctaaattcccaaataaggatacaatttcaaattgaccctataacagaaaaaggcatcattgcaaga 7158916  T
Q  118 gcattaaaccaaatcatgtttatttatataaatcaactatcaaatttaacatattgacattttagcacattaaattatg 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7158915 gcattaaaccaaatcatgtttatttatataaatcaactatcaaatttaacatattgacattttagcacattaaattatg 7158837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 418 - 518
Target Start/End: Original strand, 49607410 - 49607510
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  518 t 518  Q
    |    
T  49607510 t 49607510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 53982011 - 53982107
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 53982107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 33644200 - 33644296
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 33644296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 52629305 - 52629396
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacact 52629396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 27714993 - 27714895
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 27714895  T

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Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 54868997 - 54868899
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 54868899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 31456684 - 31456785
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||| ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  31456684 aaaaaaagtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T
Q  517 ct 518  Q
    ||    
T  31456784 ct 31456785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 8076393 - 8076489
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 8076489  T

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Target: chr3; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 420 - 498
Target Start/End: Complemental strand, 11095455 - 11095377
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 498  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 17470404 - 17470501
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacact 17470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 48587187 - 48587095
Alignment:
Q  426 aatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacact 48587095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 33118953 - 33118855
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacact 33118855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 419 - 507
Target Start/End: Complemental strand, 36707527 - 36707439
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgc 507  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 26141632 - 26141536
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||| ||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacact 26141536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 9562998 - 9563095
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||| ||||| ||||||| ||||||| ||||||||| ||| | ||||||||||||||||||||||||||||| |||||| ||||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacact 9563095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 427 - 516
Target Start/End: Original strand, 26754700 - 26754789
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| || ||||| |||| ||||||||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 51419460 - 51419364
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||| | ||| | || ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacact 51419364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 24700055 - 24699958
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||| |||||| |||||||||||| ||||||||||||| ||||||||| ||||| | |||||||| || | |||| ||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacact 24699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 518
Target Start/End: Complemental strand, 11348026 - 11347926
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||| |||||||||||||| |||||| || ||||||| ||||||||| ||||||||||||||||||||| | ||| |||| || ||| ||||||||    
T  11348026 aaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacac 11347927  T
Q  518 t 518  Q
    |    
T  11347926 t 11347926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 14623939 - 14623843
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||| ||  ||| ||||| | | ||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacact 14623843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 426 - 516
Target Start/End: Complemental strand, 30801829 - 30801739
Alignment:
Q  426 aatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||||||||||||||||||| ||  |||||||||||||| |||||||||||||| ||||| |||||||  |||| ||| ||||||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 41189866 - 41189768
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| |||||||||| ||| |||||| |||||||||| | ||||||||||||| |||||| |||||||| | ||| |||| ||||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacact 41189768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 35536625 - 35536722
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||| |||||  |||||||||||| ||||||||||||| |||||| |||||||| |||| ||||| |   ||||||||||||    
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacact 35536722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 20765015 - 20764919
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||| ||||||||| |||||| ||| ||||||| |||| ||||||||||||||||||||||||| | ||| |||| |||| |||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacact 20764919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 47531865 - 47531961
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| ||| |||||||| |||||||||||| | ||  || | ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacact 47531961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 518
Target Start/End: Complemental strand, 13898154 - 13898059
Alignment:
Q  423 agtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||| ||| ||| |||||| ||||||||||||| |||||||||||| |||||||||||||||  ||| ||||| | | ||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacact 13898059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 490
Target Start/End: Original strand, 8956756 - 8956830
Alignment:
Q  416 taaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||| |||||||||||||||||||| |||||  |||||||||| ||||||||||||||| |||||| ||||||||    
T  8956756 taaatagagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgt 8956830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 516
Target Start/End: Original strand, 11907369 - 11907465
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||| ||||||||||||||||||||| || |||||||| | |  |||| ||||||||||||||||| || ||||  |||| ||||||||||||||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 421 - 484
Target Start/End: Complemental strand, 36331479 - 36331416
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctg 484  Q
    ||||| |||||||||| |||||||||||||||||| ||||| |||||| |||||||||||||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctg 36331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 422 - 516
Target Start/End: Original strand, 41080709 - 41080801
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||||||||| |||||| | |||| |||||||||||||||||| ||||||||||| | || |||| ||||| ||| ||||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcaca 41080801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 45058652 - 45058588
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||| |||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgaca 45058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 490
Target Start/End: Complemental strand, 35965876 - 35965806
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    ||||||||||||||||| ||| |||||  ||  |||||| ||||||||||||||| |||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 516
Target Start/End: Complemental strand, 48375807 - 48375712
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||| ||||| ||||||||||||||| || |||||||||| |  | | ||| |||||||||||||  || ||||| |||| ||||||||||||||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcaca 48375712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 25407245 - 25407151
Alignment:
Q  425 taatgatacatagacacccttagatggcaatacaccctttgacacccacac-aaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||| ||| || ||| |||||||| |||| ||||||| ||||| |||||||||||||||  |||  |||||||| ||||| ||||||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacact 25407151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 518
Target Start/End: Complemental strand, 36331407 - 36331333
Alignment:
Q  444 ttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 36331333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 491
Target Start/End: Complemental strand, 21746284 - 21746212
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgaca--cccacacaaaaatctgacacgta 491  Q
    |||||||||||||||| ||| |||||| ||||||||||  | | ||||  |||||||||||||||||||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgacacgta 21746212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 492
Target Start/End: Complemental strand, 52629993 - 52629951
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgtag 492  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  52629993 tggcaatacacccttt-acacccacacaaaattctgacacgtag 52629951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 487
Target Start/End: Complemental strand, 1758560 - 1758491
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccct--ttgacacccacacaaaaatctgaca 487  Q
    |||||| ||||||||||| || || ||| | |||||||||||   |||||||||||||||||||||||||    
T  1758560 aagagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgaca 1758491  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 508
Target Start/End: Original strand, 42823116 - 42823197
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgca 508  Q
    |||||||||| ||||| |||  ||| ||||||||| |||||||||||| |||||| ||||| || ||||  |||| ||||||    
T  42823116 atgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgca 42823197  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Original strand, 53581793 - 53581833
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  53581793 tggcaatacacccttt-acacccacacaaaattctgacacgt 53581833  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 490
Target Start/End: Complemental strand, 40480913 - 40480874
Alignment:
Q  450 ggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  40480913 ggcaatacacccttt-acacccacacaaaattctgacacgt 40480874  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 48587014 - 48587042
Alignment:
Q  417 aaaaagagtaatgatacatagacaccctt 445  Q
    |||||||||||||||||||||||||||||    
T  48587014 aaaaagagtaatgatacatagacaccctt 48587042  T

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Target: chr2 (Bit Score: 97; Significance: 2e-47; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 17473020 - 17473116
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 17473116  T

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Target: chr2; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 7465836 - 7465739
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacact 7465739  T

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Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 418 - 518
Target Start/End: Complemental strand, 33436204 - 33436104
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  33436204 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacac 33436105  T
Q  518 t 518  Q
    |    
T  33436104 t 33436104  T

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Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 9058478 - 9058576
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 9058576  T

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Target: chr2; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 5574589 - 5574492
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacact 5574492  T

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Target: chr2; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 28863458 - 28863551
Alignment:
Q  425 taatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 28863551  T

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Target: chr2; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 10249484 - 10249386
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 10249386  T

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Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 32505749 - 32505652
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 32505652  T

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Target: chr2; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 13438343 - 13438439
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 13438439  T

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Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 30915461 - 30915559
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacact 30915559  T

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Target: chr2; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 40701478 - 40701574
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 40701574  T

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Target: chr2; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 19930917 - 19930824
Alignment:
Q  425 taatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacact 19930824  T

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Target: chr2; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 4060685 - 4060781
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacact 4060781  T

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Target: chr2; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 418 - 518
Target Start/End: Original strand, 20700811 - 20700911
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||| ||||||||    
T  20700811 aaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacac 20700910  T
Q  518 t 518  Q
    |    
T  20700911 t 20700911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 27864704 - 27864800
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacact 27864800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 28381755 - 28381659
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacact 28381659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 418 - 518
Target Start/End: Complemental strand, 38273246 - 38273146
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||| |||||||    
T  38273246 aaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacac 38273147  T
Q  518 t 518  Q
    |    
T  38273146 t 38273146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 40614002 - 40613906
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacact 40613906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 419 - 501
Target Start/End: Complemental strand, 38882916 - 38882835
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtgga 501  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtgga 38882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 419 - 516
Target Start/End: Complemental strand, 26891607 - 26891510
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||| || |||||||||| | || |||||||||    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 33436210 - 33436279
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgt 33436279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 418 - 518
Target Start/End: Original strand, 42257189 - 42257289
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||| |||||||||||||| | |||| |||||||||| | ||||||||||||| ||||||||||||||| | ||| |||| |||||||||||||||    
T  42257189 aaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacac 42257288  T
Q  518 t 518  Q
    |    
T  42257289 t 42257289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 2533123 - 2533219
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| |||||||||||||| |||||  |||||||||| ||||||||||| ||||||||||||||||||||| ||| | || ||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacact 2533219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 514
Target Start/End: Original strand, 36168835 - 36168928
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagca 514  Q
    ||||| |||||||||||||| ||||||||| ||||||| ||||| || ||||||||||||| |||||||| | ||| |||| ||||||||||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 423 - 518
Target Start/End: Original strand, 41575138 - 41575234
Alignment:
Q  423 agtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatccc-gcacaagcacact 518  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||  ||||||||||| ||||| || |||| ||||| |||  ||||||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacact 41575234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 43490121 - 43490217
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||| |||||||||| || |||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 43490217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 422 - 516
Target Start/End: Complemental strand, 17820104 - 17820010
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||| |||||||||||||| |  ||| ||||||||||||| ||||||||||||||||||||||||| || || ||||||| ||| ||||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 518
Target Start/End: Complemental strand, 45097841 - 45097739
Alignment:
Q  416 taaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 515  Q
    |||||||||| |||||||||| ||| |||||| |||||||||| || |||||||||| |||||||||||||| || | ||  |||| |||||||||| ||    
T  45097841 taaaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtac 45097742  T
Q  516 act 518  Q
    |||    
T  45097741 act 45097739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 13365346 - 13365418
Alignment:
Q  417 aaaaagagtaatgatacatagacac--ccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    ||||||||| |||||||||| ||||  ||||||||||||||| |||| |||||||||||||||||||||||||    
T  13365346 aaaaagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgaca 13365418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 428 - 516
Target Start/End: Original strand, 3439985 - 3440073
Alignment:
Q  428 tgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||| ||||||||||||| ||||||||||| | | ||||||||||||||||||| ||| ||  | ||||||| ||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 38732354 - 38732450
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||| |||||||||  || ||||||| || ||||||||||||||||||||||||| || ||||  |||| |||||||||| |||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacact 38732450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 440 - 518
Target Start/End: Complemental strand, 2997569 - 2997491
Alignment:
Q  440 acccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 2997491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 491
Target Start/End: Original strand, 17823782 - 17823853
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgta 491  Q
    ||||||||||||||||| ||| |||||| ||||||||||  | |  ||||||||||||||||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgta 17823853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 465 - 516
Target Start/End: Original strand, 3737986 - 3738037
Alignment:
Q  465 gacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||||||||||||| || |||| ||||| ||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 487
Target Start/End: Complemental strand, 15428842 - 15428775
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||||| |||||||||| ||| |||||  |||| |||||||| || |||| |||||||||||||||||    
T  15428842 aagagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgaca 15428775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Complemental strand, 16096913 - 16096873
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  16096913 tggcaatacacccttt-acacccacacaaaattctgacacgt 16096873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Original strand, 42849794 - 42849834
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  42849794 tggcaatacacccttt-acacccacacaaaattctgacacgt 42849834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 516
Target Start/End: Original strand, 3154193 - 3154237
Alignment:
Q  472 acacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||||||||| ||||| |||||||||| ||| ||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacaca 3154237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 419 - 518
Target Start/End: Original strand, 2581912 - 2582011
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 51898784 - 51898687
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 51898687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 9474976 - 9474880
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacact 9474880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 47452420 - 47452324
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacact 47452324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 416 - 518
Target Start/End: Original strand, 38595148 - 38595250
Alignment:
Q  416 taaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 515  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  38595148 taaaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcac 38595247  T
Q  516 act 518  Q
    |||    
T  38595248 act 38595250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 3000319 - 3000415
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacact 3000415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 48716382 - 48716286
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48716286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 38632423 - 38632325
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 38632325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 8346493 - 8346392
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||||||||||| |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  8346493 aaaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T
Q  517 ct 518  Q
    ||    
T  8346393 ct 8346392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 27564835 - 27564739
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 27564739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 41758804 - 41758901
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacact 41758901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 50630457 - 50630554
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||| |||||||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 50630554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 518
Target Start/End: Original strand, 32813244 - 32813343
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 44548473 - 44548380
Alignment:
Q  425 taatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||| | |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 44548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 37649198 - 37649294
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacact 37649294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 43132 - 43228
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||  |||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacact 43228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 26274430 - 26274528
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| ||||||||||||||||||||||  |||||||||| | ||||||| ||||| ||||||||||||| ||||||||||||||| ||||||| |||||    
T  26274430 aagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacact 26274528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 429 - 518
Target Start/End: Original strand, 26440741 - 26440830
Alignment:
Q  429 gatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||| |||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacact 26440830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 515
Target Start/End: Complemental strand, 11152476 - 11152385
Alignment:
Q  423 agtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 515  Q
    |||||||| ||||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||| || || |||||||||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 416 - 518
Target Start/End: Complemental strand, 5959106 - 5959004
Alignment:
Q  416 taaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 515  Q
    |||||||||| |||||||||| |||||||||  ||||||||||||  ||||||||||||||||||||||||| || ||||  |||| |||||||||| ||    
T  5959106 taaaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtac 5959007  T
Q  516 act 518  Q
    |||    
T  5959006 act 5959004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 452 - 516
Target Start/End: Original strand, 13414791 - 13414855
Alignment:
Q  452 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 50591100 - 50591004
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 50591004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 419 - 490
Target Start/End: Complemental strand, 23597194 - 23597123
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||||||||| | |||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgt 23597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 44453984 - 44454075
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||| |||  |||||||||| |  |||| |||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacact 44454075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 49811629 - 49811531
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| |||||| ||||||| |||||| || ||||||||| ||||||| ||||||||||||||||||||||| ||  | ||  |||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacact 49811531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 516
Target Start/End: Complemental strand, 45044662 - 45044566
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||| |||||||||| |   |||||| |||||||||||| ||||||||||| |||||||||||||| |||| ||| |||| ||||||||| ||||    
T  45044662 aagagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 449 - 516
Target Start/End: Original strand, 48489328 - 48489394
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||||  |||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  48489328 tggcaatacaccctg-gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 37926539 - 37926442
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| |||||||||||| | | |||| |||||||||| | ||| ||||||||| ||||||||||||||| | ||| ||||||||| ||||| |||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacact 37926442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 41608593 - 41608528
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||| |||||||||| ||| |||||| ||||||||||||| ||||||| |||||||||||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 422 - 512
Target Start/End: Original strand, 47748443 - 47748532
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaag 512  Q
    |||| |||||||||| | |||||||| ||||||||||||| |||||||||| | |||||||||||| || | ||  |||||||||||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaag 47748532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 3302633 - 3302537
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||| ||| |||||| || ||||| |  | | ||||||||||||||||||||||||||| |||  |||| |||  |||||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacact 3302537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 517
Target Start/End: Complemental strand, 44334239 - 44334175
Alignment:
Q  453 aatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    ||||||| | |||||| ||||||||||| ||||||||||||||| |||| || |||||| |||||    
T  44334239 aatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 750240 - 750301
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    |||||||||||||||| |||||||||||||| |||||||||| || || |||| ||| |||||    
T  750240 tggcaatacacccttt-acacccacacaaaattctgacacgtggtaacatggaccccacacaa 750301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Complemental strand, 4401493 - 4401453
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  4401493 tggcaatacacccttt-acacccacacaaaattctgacacgt 4401453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Complemental strand, 7447990 - 7447950
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  7447990 tggcaatacacccttt-acacccacacaaaattctgacacgt 7447950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Original strand, 50448195 - 50448235
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  50448195 tggcaatacacccttt-acacccacacaaaattctgacacgt 50448235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 2740273 - 2740370
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 2740370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 18520989 - 18520888
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18520989 aaaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T
Q  517 ct 518  Q
    ||    
T  18520889 ct 18520888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 14831809 - 14831910
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14831809 aaaatgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T
Q  517 ct 518  Q
    ||    
T  14831909 ct 14831910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 33149738 - 33149642
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 33149642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 36733044 - 36732946
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacact 36732946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 418 - 518
Target Start/End: Original strand, 13811648 - 13811748
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  518 t 518  Q
    |    
T  13811748 t 13811748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 35785199 - 35785295
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacact 35785295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 40145407 - 40145503
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 40145503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 42414402 - 42414306
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 42414306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 18 - 178
Target Start/End: Complemental strand, 4867159 - 4866987
Alignment:
Q  18 attcttatattgtcgttgttgttgtcagaaa--cttctaaattcccaaacaaggatacaatttcaaattgaccctataacagaaaaa----------ggc 105  Q
    |||||| ||||| | | |||||||||||| |  |||||||||| ||  ||||||||||||||||||||||||||||||||| |||||          | |    
T  4867159 attcttttattgccatagttgttgtcagatatacttctaaattgcctgacaaggatacaatttcaaattgaccctataacaaaaaaaaaaaaaaaaagac 4867060  T
Q  106 atcattgcaagagcattaaaccaaatcatgtttatttatataaatcaactatcaaatttaacatattgacatt 178  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  4867059 atcattgaaagagcattaaaccaaattatgtttatttatataaatcaactatcagatttaacatattgacatt 4866987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 35943992 - 35943896
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| ||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacact 35943896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 197 - 311
Target Start/End: Complemental strand, 4866751 - 4866635
Alignment:
Q  197 caaacatagcagaaataatgag--cagaatatatcaagctactccattccatgttgtcaatggattcggatttcctacaatcacaattcaacacattcac 294  Q
    ||||||||| |||||||| |||  || |||||||| | ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  4866751 caaacatagtagaaataacgagaacataatatatccaactactccattccatgttgtcattggatttggatttcctacaatcacaattcaacacattcac 4866652  T
Q  295 acaattattaaattggt 311  Q
    ||| ||| |||||||||    
T  4866651 acagttactaaattggt 4866635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 28177775 - 28177871
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacact 28177871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 418 - 518
Target Start/End: Original strand, 31008984 - 31009084
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||| |||||||||| ||| |||||| || |||||||  |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  518 t 518  Q
    |    
T  31009084 t 31009084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 15409712 - 15409614
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| |||||||||||||| |||||| || |||||||  |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacact 15409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 36875708 - 36875616
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||    
T  36875708 aaaaaaagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcaca 36875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 26720516 - 26720612
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| |||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||||||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacact 26720612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 26990265 - 26990361
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| |||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||||||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacact 26990361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 421 - 516
Target Start/End: Original strand, 6679697 - 6679792
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||| |||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 419 - 518
Target Start/End: Complemental strand, 3921368 - 3921269
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 2252269 - 2252172
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 2252172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 421 - 513
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagc 513  Q
    |||||||| ||||||||||||| |||| |||||||||| ||||| | |  || | |||||||||||||||||||||||||| |||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 20073616 - 20073520
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||| ||||||| | ||||||| |||||||||||||||||| |||| ||||||||  |||||   |||||||| || |||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacact 20073520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 39688999 - 39688934
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctga 485  Q
    |||||| |||||||||| |||||||||  |||||||||| || |||||||||||||||||||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 490
Target Start/End: Complemental strand, 33825424 - 33825356
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||| ||||||||  ||||| ||||||||||| | |||||||||||| |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgt 33825356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 427 - 485
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  427 atgatacatagacacccttagatggcaataca-ccctttgacacccacacaaaaatctga 485  Q
    |||||||||||||| |||||| |||||||||| ||| |||||||||||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 419 - 518
Target Start/End: Original strand, 38296200 - 38296299
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||| |||||||||||||   ||||| || |||||||||  || | ||||||||||||||| |||||||||  ||||||||||  ||||||||||||    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacact 38296299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 6260101 - 6260005
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||| ||| || ||| || ||||||||||||| |||||||| ||||||||| |||| | ||||| |||| | | || |||||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacact 6260005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 514
Target Start/End: Original strand, 31132392 - 31132436
Alignment:
Q  470 ccacacaaaaatctgacacgtagtcacgtggatcccgcacaagca 514  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 16327902 - 16327969
Alignment:
Q  423 agtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||| ||| | | |||||| |||||||||| || |||||||||||| |||||||||||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgt 16327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 4813913 - 4813845
Alignment:
Q  114 aagagcattaaaccaaatcatgtttat--ttatataaatcaactatcaaatttaacatattgacatttt 180  Q
    ||||||||||||| ||| ||| |||||  | ||||||||||||||||| ||| ||||||||||||||||    
T  4813913 aagagcattaaacaaaaacatatttatagtcatataaatcaactatcatattaaacatattgacatttt 4813845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 488
Target Start/End: Original strand, 9603811 - 9603879
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacac 488  Q
    ||||||||||||||||| ||| |||||| ||  ||||||| | || ||||| |||||||||||||||||    
T  9603811 aagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacac 9603879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 516
Target Start/End: Original strand, 21370048 - 21370098
Alignment:
Q  466 acacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||||| ||||||||||||| || |||||||||| ||||||||| ||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacaca 21370098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 16115245 - 16115273
Alignment:
Q  417 aaaaagagtaatgatacatagacaccctt 445  Q
    |||||||||||||||||||||||||||||    
T  16115245 aaaaagagtaatgatacatagacaccctt 16115273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 33149551 - 33149579
Alignment:
Q  417 aaaaagagtaatgatacatagacaccctt 445  Q
    |||||||||||||||||||||||||||||    
T  33149551 aaaaagagtaatgatacatagacaccctt 33149579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 50052533 - 50052432
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50052533 aaaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T
Q  517 ct 518  Q
    ||    
T  50052433 ct 50052432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 6034044 - 6034140
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacact 6034140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 48183151 - 48183053
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48183053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 480552 - 480451
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  480552 aaaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T
Q  517 ct 518  Q
    ||    
T  480452 ct 480451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 11511562 - 11511466
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 11511466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 29234346 - 29234249
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 29234249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 42044472 - 42044371
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42044472 aaaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T
Q  517 ct 518  Q
    ||    
T  42044372 ct 42044371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 41236347 - 41236443
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 41236443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 420 - 516
Target Start/End: Complemental strand, 24995209 - 24995113
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 414 - 518
Target Start/End: Original strand, 29239878 - 29239982
Alignment:
Q  414 tttaaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagc 513  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||    
T  29239878 tttataaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagc 29239977  T
Q  514 acact 518  Q
    |||||    
T  29239978 acact 29239982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 54473633 - 54473537
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 54473537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 422 - 515
Target Start/End: Complemental strand, 50526271 - 50526178
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 515  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 3481654 - 3481750
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacact 3481750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 23608233 - 23608331
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |  || ||||||||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacact 23608331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 31910192 - 31910288
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| || |||||||| |||||||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacact 31910288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 40574779 - 40574875
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||  |  || ||||||||| |||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacact 40574875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 518
Target Start/End: Complemental strand, 19670830 - 19670720
Alignment:
Q  408 aaaggttttaaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgc 507  Q
    |||| |||| |||||||| |||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||| || | ||  |||| |||||    
T  19670830 aaagtttttgaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgc 19670731  T
Q  508 acaagcacact 518  Q
    ||||| |||||    
T  19670730 acaagtacact 19670720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 29977883 - 29977981
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||| | | || ||| ||||||||||||| || ||||||||||||||||||||||||||||||  |||| ||| ||||||||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacact 29977981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 55475189 - 55475256
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 427 - 514
Target Start/End: Complemental strand, 53352660 - 53352574
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagca 514  Q
    ||||||||||||||||||||| || |||||||  |||| ||||| |||||||||||||||||||||| | ||||| ||||||||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 29548061 - 29547963
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| |||||||||| ||| |||||| |||||||||| || ||||||||||||||||||||||||| || | ||  ||||||||||| ||| |||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacact 29547963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 460 - 518
Target Start/End: Original strand, 41823920 - 41823978
Alignment:
Q  460 cctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacact 41823978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 47986207 - 47986304
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| |||||||||| |||||||||| |||||||||| || |||||| |||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 47986304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 50813993 - 50813896
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| |||||||||| |||| ||||| ||| ||||||||| ||||||||||||||||||||||||| || ||||  || | |||||||||| |||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacact 50813896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 32766956 - 32767023
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||||| |||||||||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgaca 32767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 440 - 518
Target Start/End: Complemental strand, 17983825 - 17983747
Alignment:
Q  440 acccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 17983747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 490
Target Start/End: Original strand, 47104542 - 47104612
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    ||||||||||||| |||||||  |||||||| |||||||| || |||||||||||||||||| ||||||||    
T  47104542 aagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgt 47104612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||| |||||||||| |||||||||| ||||||||||||  |||||||||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||| |||||||||| ||| |||||| |||||||||| ||||||||||| ||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 28480369 - 28480272
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| || ||||||||||| |||||| || ||||||||   || |||| ||||||||||||||||| ||||||| ||||| ||| ||||| ||||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacact 28480272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 28481244 - 28481147
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| || ||||||||||| |||||| || ||||||||   || |||| ||||||||||||||||| ||||||| ||||| ||| ||||| ||||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacact 28481147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 28482119 - 28482022
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| || ||||||||||| |||||| || ||||||||   || |||| ||||||||||||||||| ||||||| ||||| ||| ||||| ||||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacact 28482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 516
Target Start/End: Complemental strand, 48647828 - 48647732
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||| |||| ||||| ||| |||||| |  |||||||||  || ||||||||| |||||||| |||||| ||||||||||  |||||||||||||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 485
Target Start/End: Complemental strand, 29589831 - 29589777
Alignment:
Q  430 atacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctga 485  Q
    ||||||| |||||||||| || |||||||||| |||||||||||||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctga 29589777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 511
Target Start/End: Complemental strand, 33703307 - 33703245
Alignment:
Q  448 atggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || ||||||||||||||    
T  33703307 atggcaatacacccttt-acacccacacaaaattctgacacgtggcaacttggatcccgcacaa 33703245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 44536846 - 44536781
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    ||||| |||||||||| ||||  |||| ||||||||||||| |||||| ||||||||||||||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgaca 44536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 18924595 - 18924530
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||| ||||| |||| | |||||||| ||||||||||||| |||| | ||||||||||||||||||    
T  18924595 gagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgaca 18924530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 495
Target Start/End: Original strand, 18769141 - 18769182
Alignment:
Q  454 atacaccctttgacacccacacaaaaatctgacacgtagtca 495  Q
    ||||||||| | ||||||||||||||||||||||||| ||||    
T  18769141 atacaccctctaacacccacacaaaaatctgacacgtggtca 18769182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 7389387 - 7389485
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 7389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 3434561 - 3434658
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacact 3434658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 8080485 - 8080387
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 8080387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 3783998 - 3784091
Alignment:
Q  425 taatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 3784091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 36362014 - 36361917
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacact 36361917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 413 - 518
Target Start/End: Original strand, 38837208 - 38837313
Alignment:
Q  413 ttttaaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaag 512  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  38837208 ttttcaaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaag 38837307  T
Q  513 cacact 518  Q
    ||||||    
T  38837308 cacact 38837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 4999614 - 4999518
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacact 4999518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 38267040 - 38267136
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 38267136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 419 - 518
Target Start/End: Original strand, 40957704 - 40957803
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 19436289 - 19436191
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||| |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacact 19436191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 35137528 - 35137629
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  35137528 aaaatgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T
Q  517 ct 518  Q
    ||    
T  35137628 ct 35137629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 36362025 - 36362122
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacact 36362122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 19329842 - 19329938
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 19329938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 423 - 518
Target Start/End: Complemental strand, 32951592 - 32951497
Alignment:
Q  423 agtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||| |||||||| ||||||| ||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 32951497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 3694370 - 3694463
Alignment:
Q  425 taatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||| ||| |||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacact 3694463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 413 - 518
Target Start/End: Original strand, 8238203 - 8238309
Alignment:
Q  413 ttttaaaaagagtaatgatacatagacaccct-tagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    |||||||| |||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||    
T  8238203 ttttaaaatgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaa 8238302  T
Q  512 gcacact 518  Q
    | |||||    
T  8238303 gtacact 8238309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 422 - 516
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||| |||||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||||||||| | ||| |||| ||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 35522881 - 35522972
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||| |||||  |||||||||||| ||| ||||||||||||||||||||||||| | ||  |||||||||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacact 35522972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 422 - 516
Target Start/End: Original strand, 21234401 - 21234495
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||| |||||||||||||| |||||| || |||||||||||||||||| ||||||||||| |||||||||| ||| || | ||||||||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 38044195 - 38044293
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| |||||||||| |||||||||| ||||||||||||| |||||| |||||||||||||||||| |||| ||  |||| |||||||||| |||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacact 38044293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 420 - 516
Target Start/End: Original strand, 36208171 - 36208267
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||| ||||||||||||||||||||| ||| ||||||  | |||||||||||||||||| |||||| || |||||||||| || |||||||||||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 421 - 487
Target Start/End: Original strand, 22343360 - 22343426
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    ||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 22343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 35468960 - 35468894
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatct 483  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||||||    
T  35468960 aaaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 419 - 488
Target Start/End: Complemental strand, 10343666 - 10343597
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacac 488  Q
    ||||||||||||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||||||    
T  10343666 aaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 41915740 - 41915837
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||| || | ||  |||| |||||||||| |||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 41915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 419 - 518
Target Start/End: Original strand, 11044185 - 11044274
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||          |||||||||||||||||||| |||||||||| |||||    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacact 11044274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 418 - 518
Target Start/End: Original strand, 18207176 - 18207275
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||| |||||||||||||| |||||| ||||||||||||  |||||||||| |||||||||| |||||| | |||||| | ||| |||||||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacac 18207274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 514
Target Start/End: Complemental strand, 46033902 - 46033809
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagca 514  Q
    ||||| |||||||||||| |  ||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| || |  |||||||||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 514
Target Start/End: Original strand, 41423682 - 41423774
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagca 514  Q
    |||| |||||||||||||| | |||||||| ||||||||  |||||||  |||||||||||||||| || ||||||| ||||||| |||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagca 41423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 7727901 - 7728002
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||| |||||||||| |||||||||| ||| ||||||||  ||||||  |||| |||||||||||| || ||||  |||| |||||||||| |||    
T  7727901 aaaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtaca 7728000  T
Q  517 ct 518  Q
    ||    
T  7728001 ct 7728002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 452 - 517
Target Start/End: Complemental strand, 16374894 - 16374829
Alignment:
Q  452 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    ||||||| || |||||| ||||||||||||||||||||| |||||||||||| | |||||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacac 16374829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||| |||||||||| |||  ||||| ||||||||||||| |||||||||||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 40846213 - 40846124
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    |||| |||||||||| ||| |||||| ||||||||||||| |||||| |||||||||||||| ||| ||||| |  |||| |||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaa 40846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 490
Target Start/End: Complemental strand, 39256023 - 39255955
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||| |||||||||||||| |||||| ||||||||||||  |||| ||||| |||||||||||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt 39255955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 31735884 - 31735973
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||       |||||| | ||| |||||||||||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaa-------acacgtggccacatggatcccgcacaagcacact 31735973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 513
Target Start/End: Original strand, 26296643 - 26296735
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagc 513  Q
    ||||| |||||||||||||| |||||| || ||||| ||||||| ||| ||||| |||||||||| |||| | ||  |||| |||||||||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagc 26296735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 456 - 516
Target Start/End: Complemental strand, 27744375 - 27744315
Alignment:
Q  456 acaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||| |||||||||||||||||||| || | |||||||||||| || |||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcaca 27744315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 491
Target Start/End: Original strand, 45223037 - 45223111
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgta 491  Q
    |||||||||||||||| ||| ||| |||||| ||||||||||  |||  ||| | ||||||||||||||||||||    
T  45223037 aaaaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgta 45223111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 501
Target Start/End: Complemental strand, 2318338 - 2318264
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtgga 501  Q
    |||||||||  ||| || ||| |||||| |||||  ||||||||||||||||||||||||  || ||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtgga 2318264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Original strand, 32029752 - 32029792
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  32029752 tggcaatacacccttt-acacccacacaaaattctgacacgt 32029792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 7e-41; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 416 - 517
Target Start/End: Complemental strand, 504227 - 504126
Alignment:
Q  416 taaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 515  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  504227 taaaatgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 504128  T
Q  516 ac 517  Q
    ||    
T  504127 ac 504126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 37038478 - 37038575
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 37038575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 12831047 - 12831143
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 12831143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 15197333 - 15197429
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 15197429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 34012396 - 34012300
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 34012300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 14547920 - 14548018
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 14548018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 5957825 - 5957926
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5957825 aaaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T
Q  517 ct 518  Q
    ||    
T  5957925 ct 5957926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 1180040 - 1179944
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacact 1179944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 23122697 - 23122601
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 23122601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 40424043 - 40423947
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 40423947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 416 - 518
Target Start/End: Complemental strand, 43414687 - 43414585
Alignment:
Q  416 taaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 515  Q
    ||||| |||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||    
T  43414687 taaaatgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcac 43414588  T
Q  516 act 518  Q
    |||    
T  43414587 act 43414585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 518
Target Start/End: Complemental strand, 10284734 - 10284635
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||| ||||||||||||||||||||  || |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 421 - 514
Target Start/End: Complemental strand, 44507188 - 44507095
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagca 514  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 427 - 518
Target Start/End: Complemental strand, 10621182 - 10621091
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacact 10621091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 15048281 - 15048186
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacact 15048186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 441 - 518
Target Start/End: Complemental strand, 8841513 - 8841436
Alignment:
Q  441 cccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 8841436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 16383372 - 16383473
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||    
T  16383372 aaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 16383471  T
Q  517 ct 518  Q
    ||    
T  16383472 ct 16383473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 423 - 518
Target Start/End: Original strand, 9122196 - 9122281
Alignment:
Q  423 agtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||| |||||||||||          |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacac----------ccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacact 9122281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 34307214 - 34307281
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 4854965 - 4854867
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| ||||| ||| |||||||||| | || | ||| |||| || |||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacact 4854867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 420 - 516
Target Start/End: Complemental strand, 15259031 - 15258935
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||| |||||||||||| || |||||||||||||||| || | |||| ||||| |||||||||||| || |||||||||| || |||||||||||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 422 - 490
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 417 - 485
Target Start/End: Original strand, 24307624 - 24307692
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctga 485  Q
    ||||||||| |||||||||| |||||||||| |||||||||| || |||||||||||||||||||||||    
T  24307624 aaaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 24307895 - 24307797
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| |||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| | || | ||  |||| |||||||||| |||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacact 24307797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 30479579 - 30479509
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||| |||| |||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  30479579 aaaaggagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 422 - 501
Target Start/End: Complemental strand, 14055692 - 14055613
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtgga 501  Q
    |||| ||||||||| ||||||||||| || |||||||| | |||||| |||||||||||||| ||| |||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtgga 14055613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 518
Target Start/End: Original strand, 42221513 - 42221611
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||| ||| |||||| || |||||||  | | ||||||||||||||||||||||||||| |||  |||| |||  |||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacact 42221611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 518
Target Start/End: Complemental strand, 16056506 - 16056405
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||| |||||||||| ||| |||||  || ||||||| || ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||    
T  16056506 aaaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 16056407  T
Q  517 ct 518  Q
    ||    
T  16056406 ct 16056405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 32032724 - 32032820
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| |||||||||| |||||||||| |||||||||| |||| |||| |||||||||||||||||| || | ||  ||||||| ||||||| |||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacact 32032820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 511
Target Start/End: Original strand, 17443824 - 17443914
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    ||||| |||||||||||||| |||||| || ||||||||   || |||| ||||||||||||||||| ||||||| ||||| ||| |||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 516
Target Start/End: Original strand, 38229424 - 38229522
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||| |||| |||||||||  |||| ||||| ||||||||| | | | ||||||||||||||||||||||| || ||||||||||| | | |||||||||    
T  38229424 aaaatgagttatgatacatgaacactcttaggtggcaatacgctcct-gacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcaca 38229522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 2547161 - 2547100
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  2547161 tggcaatacacccttt-acacccacacaaaattctgacacgtggcaacttggatcccacacaa 2547100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 29705527 - 29705466
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || |||| |||||||||    
T  29705527 tggcaatacacccttt-acacccacacaaaattctgacacgtggcaacttggaccccgcacaa 29705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 34012209 - 34012237
Alignment:
Q  417 aaaaagagtaatgatacatagacaccctt 445  Q
    |||||||||||||||||||||||||||||    
T  34012209 aaaaagagtaatgatacatagacaccctt 34012237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 32869678 - 32869774
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 32869774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 22880755 - 22880662
Alignment:
Q  425 taatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacact 22880662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 11427615 - 11427714
Alignment:
Q  421 agagtaatgatacatagacaccct--tagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 417 - 518
Target Start/End: Original strand, 17598549 - 17598650
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  17598549 aaaatgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T
Q  517 ct 518  Q
    ||    
T  17598649 ct 17598650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 29857827 - 29857923
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacact 29857923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 518
Target Start/End: Complemental strand, 6209568 - 6209469
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T

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Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 413 - 518
Target Start/End: Complemental strand, 23128236 - 23128131
Alignment:
Q  413 ttttaaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaag 512  Q
    |||| |||||| |||||||| ||||||||| |||  ||  |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23128236 tttttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaag 23128137  T
Q  513 cacact 518  Q
    ||||||    
T  23128136 cacact 23128131  T

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Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 31109500 - 31109404
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| ||| |||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacact 31109404  T

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Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 413 - 511
Target Start/End: Original strand, 15832568 - 15832666
Alignment:
Q  413 ttttaaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    |||| ||||||||||||||||||||||||| |||| || ||||| | | |||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  15832568 ttttcaaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 421 - 518
Target Start/End: Original strand, 31976247 - 31976344
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||| |||||||||||||| |||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacact 31976344  T

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Target: chr6; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 419 - 518
Target Start/End: Complemental strand, 30341463 - 30341364
Alignment:
Q  419 aaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T

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Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 15990144 - 15990046
Alignment:
Q  420 aagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 15990046  T

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Target: chr6; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 418 - 518
Target Start/End: Complemental strand, 31110863 - 31110765
Alignment:
Q  418 aaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 517  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||||  | |||||||||||||||||||  ||| |||| || ||||||||||||    
T  31110863 aaaagagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcacac 31110766  T

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Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 15508124 - 15508028
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 15508028  T

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Target: chr6; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 518
Target Start/End: Original strand, 946370 - 946472
Alignment:
Q  416 taaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 515  Q
    |||||| ||||| |||||||||||| |||||| ||  |||||||||||||||||| || |||||||||||||| |||||||||  ||||||| | |||||    
T  946370 taaaaaaagtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcac 946469  T
Q  516 act 518  Q
    |||    
T  946470 act 946472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 28536582 - 28536492
Alignment:
Q  426 aatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||| ||| |||||| |||||||||| || |||||||||||||||||||||||||||  |||| ||||| ||| ||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacact 28536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 31953130 - 31953065
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    ||||||||||| ||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 31953065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 417 - 516
Target Start/End: Original strand, 12732477 - 12732576
Alignment:
Q  417 aaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    ||||||||||||||||||||||||  ||||  |||||||| |  | |||||||||||||||||||||||||||| |  | ||||||||| || |||||||    
T  12732477 aaaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcaca 12732576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 427 - 516
Target Start/End: Complemental strand, 9379807 - 9379718
Alignment:
Q  427 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||||||||||| ||||||||| ||||||| || |||||||||| |||||||| |||||||| | || ||||||| | ||||| ||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacaca 9379718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 4231548 - 4231644
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    |||| ||||| |||| ||| | |||| ||||||||||||| ||| |||||||||||||||||||||||| | ||  |||| |||||||||| |||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacact 4231644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  421 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 487  Q
    |||||||||||||||||||| |||||| |||||||| | |  ||||||| || |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Complemental strand, 7367714 - 7367674
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  7367714 tggcaatacacccttt-acacccacacaaaattctgacacgt 7367674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Original strand, 26669944 - 26669984
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  26669944 tggcaatacacccttt-acacccacacaaaattctgacacgt 26669984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 32869865 - 32869837
Alignment:
Q  417 aaaaagagtaatgatacatagacaccctt 445  Q
    |||||||||||||||||||||||||||||    
T  32869865 aaaaagagtaatgatacatagacaccctt 32869837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 518
Target Start/End: Original strand, 4029 - 4125
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacact 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 413 - 518
Target Start/End: Complemental strand, 10218 - 10113
Alignment:
Q  413 ttttaaaaagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaag 512  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||||| | || |||||    
T  10218 ttttaaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaag 10119  T
Q  513 cacact 518  Q
    ||||||    
T  10118 cacact 10113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 1029 - 933
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||| | |||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacact 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 1029 - 933
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 518  Q
    ||||||||||||||||||| | |||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacact 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 511
Target Start/End: Original strand, 152514 - 152587
Alignment:
Q  438 acacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaa 511  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||| || ||||  ||||||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaa 152587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 512
Target Start/End: Complemental strand, 8963 - 8873
Alignment:
Q  422 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaag 512  Q
    |||| |||||| ||||||| |||||  || ||||||||  ||||||| | |||||||||| |||||| |||||||||||| ||| ||||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaag 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 516
Target Start/End: Original strand, 17083 - 17148
Alignment:
Q  451 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 516  Q
    |||||||| || | |||| |||||||||||||||||| || ||||| |||| ||||||||||||||    
T  17083 gcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 490
Target Start/End: Complemental strand, 850 - 810
Alignment:
Q  449 tggcaatacaccctttgacacccacacaaaaatctgacacgt 490  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  850 tggcaatacacccttt-acacccacacaaaattctgacacgt 810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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