View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19591_low_2 (Length: 250)
Name: NF19591_low_2
Description: NF19591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19591_low_2 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 2332783 - 2332546
Alignment:
| Q |
13 |
aatatttgcattaaacaatatacaaacataaggtccatgcaaaataaacgttttcaaatttgcatgaactcgatatctatctgatgcaaataaagacatg |
112 |
Q |
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| T |
2332783 |
aatatttgcattaaacaatatacaaacataaggtccatgcaaaataaacgttttcaaatttgcatgaactcgatatctatctgatgcaaataaagacatg |
2332684 |
T |
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| Q |
113 |
gaaatgacaaatagtcagtcagatactatgagtatgtatctttacttctttaggatactttgtaagtattnnnnnnntagaaactatcatatcaaatgtg |
212 |
Q |
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| T |
2332683 |
gaaatgacaaatagtcagtcagatactatgagtatgtatctttacttctttaggatactttgtaagtattaaaaaaatagaaactatcatatcaaatgtg |
2332584 |
T |
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| Q |
213 |
aaattgttcaagttctcaatgtgttgagtgtcatagtt |
250 |
Q |
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| T |
2332583 |
aaattgttcaagttctcaatgtgttgagtgtcatagtt |
2332546 |
T |
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