View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19595_high_5 (Length: 348)
Name: NF19595_high_5
Description: NF19595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19595_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 13 - 331
Target Start/End: Original strand, 38091465 - 38091783
Alignment:
| Q |
13 |
aatatttggatcggattcgaaagctttatgattacatgacaccttatgtgtcaaattcaccaagaagttcatatgtgaactatagagatgttgatatagg |
112 |
Q |
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| T |
38091465 |
aatatttggatcggattcgaaagctttatgattacatgacaccttatgtgtcagattcaccaagaagttcatatgtgaactatagagatgttgatatagg |
38091564 |
T |
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| Q |
113 |
tgtcaatggagatggggatgttagttatgaaaaagctagtatttggggtaaaaagtatttcaaaggaaactttgataggcttgtagaggttaaaactgca |
212 |
Q |
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| T |
38091565 |
tgtcaatggagatggggatgttagttatgaaaaagctagtatttggggtaaaaagtatttcaaaggaaactttgataggcttgtagaggttaaaactgca |
38091664 |
T |
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| Q |
213 |
attgatccaagtaattttttcaaatatgaacaaagtattccatcacttgcatctgagactagtataatggcagaatacaggcagccatcaaagggtgtat |
312 |
Q |
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| T |
38091665 |
attgatccaagtaattttttcaaatatgaacaaagtattccatcacttgcatctgagactagtataatggcagaatacaggcagccatcaaagggtgtat |
38091764 |
T |
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| Q |
313 |
cattataggaggtatctag |
331 |
Q |
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| T |
38091765 |
cattataggaggtatctag |
38091783 |
T |
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