View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19598_high_38 (Length: 274)
Name: NF19598_high_38
Description: NF19598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19598_high_38 |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 259
Target Start/End: Complemental strand, 26836160 - 26835918
Alignment:
| Q |
17 |
aatggaaaggaataagaaacatgtgacataaatgtcactagaaagtgaatctcatctcaaggtctatcatcaaaatcactttgggctagccagcttatga |
116 |
Q |
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| T |
26836160 |
aatggaaaggaataagaaacatgtgacataaatgtcactagaaagtgaatctcatttcaaggtctatcatcaaaatcactttgggctagccagcttatga |
26836061 |
T |
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| Q |
117 |
aatttatatccctgtgaaatatgatgaccatactacttatcaaaatgtgacctgactttcgtcctttatttttatggttagagattctatttattactca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26836060 |
aatttatatccctgtgaaatatgatgaccatactacttatcaaaatgtgacctgactttcgtcctttatttttatggttagagattctatttattactca |
26835961 |
T |
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| Q |
217 |
tgcattaaaattcacttactttcacaaaaacatatatagactt |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26835960 |
tgcattaaaattcacttactttcacaaaaacatatatagactt |
26835918 |
T |
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