View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19598_low_10 (Length: 457)

Name: NF19598_low_10
Description: NF19598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19598_low_10
NF19598_low_10
[»] chr4 (54 HSPs)
chr4 (237-443)||(7142831-7143037)
chr4 (1-146)||(19926822-19926967)
chr4 (1-146)||(26970463-26970608)
chr4 (1-146)||(5707320-5707465)
chr4 (1-146)||(26963640-26963785)
chr4 (1-146)||(55612683-55612828)
chr4 (1-146)||(5713948-5714093)
chr4 (1-144)||(18262214-18262357)
chr4 (1-146)||(868597-868742)
chr4 (1-146)||(10621395-10621540)
chr4 (1-146)||(10628474-10628619)
chr4 (1-144)||(28393196-28393339)
chr4 (1-144)||(18269070-18269218)
chr4 (1-144)||(4426666-4426808)
chr4 (1-134)||(8845215-8845348)
chr4 (1-134)||(8858179-8858312)
chr4 (31-146)||(12357136-12357251)
chr4 (11-138)||(20311299-20311427)
chr4 (237-330)||(4841722-4841815)
chr4 (237-443)||(5182929-5183132)
chr4 (237-387)||(5214548-5214695)
chr4 (53-140)||(35223576-35223663)
chr4 (237-443)||(5160687-5160891)
chr4 (43-140)||(5668230-5668327)
chr4 (1-144)||(5616215-5616358)
chr4 (1-140)||(10677615-10677753)
chr4 (1-140)||(10891255-10891393)
chr4 (241-443)||(4856223-4856422)
chr4 (182-238)||(5713856-5713912)
chr4 (182-238)||(19927003-19927059)
chr4 (182-238)||(26963548-26963604)
chr4 (182-238)||(26970371-26970427)
chr4 (182-240)||(5707226-5707284)
chr4 (237-330)||(5196445-5196538)
chr4 (182-238)||(10621576-10621632)
chr4 (182-238)||(12357044-12357100)
chr4 (182-236)||(868507-868561)
chr4 (182-239)||(55612593-55612650)
chr4 (182-238)||(10628655-10628711)
chr4 (182-238)||(17142372-17142428)
chr4 (184-239)||(28393380-28393435)
chr4 (182-238)||(4426847-4426903)
chr4 (182-238)||(18268976-18269032)
chr4 (30-97)||(39074278-39074346)
chr4 (295-443)||(5173597-5173742)
chr4 (182-223)||(5668371-5668412)
chr4 (182-231)||(55992680-55992729)
chr4 (182-222)||(18262136-18262176)
chr4 (37-120)||(21454235-21454319)
chr4 (37-96)||(11161913-11161972)
chr4 (182-236)||(20311207-20311261)
chr4 (366-443)||(5196335-5196412)
chr4 (182-223)||(8845125-8845166)
chr4 (182-223)||(8858089-8858130)
[»] scaffold0234 (4 HSPs)
scaffold0234 (1-146)||(2383-2528)
scaffold0234 (1-146)||(11274-11419)
scaffold0234 (182-238)||(2564-2620)
scaffold0234 (182-238)||(11455-11511)
[»] chr3 (53 HSPs)
chr3 (1-146)||(6110064-6110209)
chr3 (1-146)||(10572654-10572799)
chr3 (1-143)||(13211305-13211447)
chr3 (1-146)||(13248607-13248752)
chr3 (1-146)||(15600946-15601091)
chr3 (1-146)||(15607491-15607636)
chr3 (1-146)||(18640808-18640953)
chr3 (1-144)||(16482545-16482688)
chr3 (1-140)||(17781180-17781319)
chr3 (1-144)||(18522665-18522808)
chr3 (1-146)||(8490488-8490633)
chr3 (1-140)||(10579417-10579556)
chr3 (1-146)||(15357648-15357793)
chr3 (4-144)||(17200249-17200389)
chr3 (1-140)||(19089807-19089946)
chr3 (19-144)||(18519980-18520105)
chr3 (1-144)||(13516813-13516956)
chr3 (1-127)||(15342281-15342407)
chr3 (1-140)||(32056962-32057101)
chr3 (1-140)||(1647583-1647726)
chr3 (1-144)||(16200128-16200270)
chr3 (1-146)||(29924971-29925116)
chr3 (1-146)||(29974124-29974269)
chr3 (1-144)||(16200434-16200576)
chr3 (11-139)||(24253460-24253589)
chr3 (82-144)||(18534758-18534820)
chr3 (182-239)||(8490395-8490452)
chr3 (182-238)||(6109972-6110028)
chr3 (182-238)||(13248515-13248571)
chr3 (182-240)||(18640989-18641047)
chr3 (182-238)||(13211211-13211267)
chr3 (99-144)||(18510924-18510969)
chr3 (182-238)||(17136137-17136193)
chr3 (188-239)||(10579603-10579654)
chr3 (182-238)||(15607672-15607729)
chr3 (182-239)||(16482727-16482783)
chr3 (182-238)||(15351237-15351293)
chr3 (182-238)||(15357829-15357885)
chr3 (182-238)||(17200427-17200483)
chr3 (182-238)||(18519885-18519941)
chr3 (188-238)||(10572840-10572890)
chr3 (182-238)||(15601127-15601184)
chr3 (182-238)||(1647768-1647824)
chr3 (182-238)||(13516719-13516775)
chr3 (182-238)||(17781358-17781414)
chr3 (182-238)||(19089985-19090041)
chr3 (182-238)||(32057144-32057200)
chr3 (1-40)||(17136465-17136504)
chr3 (182-238)||(18510829-18510885)
chr3 (182-238)||(18522570-18522626)
chr3 (182-230)||(18534671-18534719)
chr3 (182-238)||(29924879-29924935)
chr3 (182-238)||(29974032-29974088)
[»] chr1 (26 HSPs)
chr1 (1-146)||(18252030-18252175)
chr1 (1-146)||(18532576-18532721)
chr1 (1-146)||(27131471-27131616)
chr1 (1-144)||(16359097-16359240)
chr1 (1-144)||(21171295-21171438)
chr1 (1-144)||(27310639-27310782)
chr1 (1-146)||(3855981-3856126)
chr1 (1-140)||(36816695-36816834)
chr1 (13-146)||(22657295-22657429)
chr1 (28-112)||(12006628-12006712)
chr1 (182-238)||(18251936-18251992)
chr1 (182-238)||(18532757-18532813)
chr1 (66-140)||(27277682-27277756)
chr1 (182-240)||(27310821-27310879)
chr1 (31-112)||(12014376-12014457)
chr1 (182-240)||(16359280-16359338)
chr1 (71-140)||(30720625-30720694)
chr1 (182-238)||(21171479-21171535)
chr1 (186-238)||(22657469-22657521)
chr1 (39-116)||(3403248-3403325)
chr1 (39-116)||(3443494-3443571)
chr1 (185-230)||(36816881-36816926)
chr1 (182-238)||(3856164-3856220)
chr1 (182-239)||(27131652-27131705)
chr1 (99-134)||(9918071-9918106)
chr1 (182-238)||(27277800-27277856)
[»] chr7 (27 HSPs)
chr7 (1-146)||(29327784-29327929)
chr7 (1-146)||(11536124-11536269)
chr7 (1-146)||(11543042-11543187)
chr7 (1-144)||(15152445-15152588)
chr7 (1-144)||(12750828-12750971)
chr7 (1-144)||(18561009-18561152)
chr7 (1-144)||(15148144-15148287)
chr7 (1-144)||(18257904-18258047)
chr7 (1-140)||(12738542-12738681)
chr7 (1-140)||(13392157-13392295)
chr7 (53-140)||(39111819-39111905)
chr7 (182-238)||(2653275-2653331)
chr7 (182-238)||(11543223-11543279)
chr7 (182-238)||(12738443-12738499)
chr7 (1-124)||(2364917-2365040)
chr7 (182-238)||(11536305-11536361)
chr7 (182-238)||(12750733-12750789)
chr7 (182-238)||(15152350-15152406)
chr7 (19-113)||(7396221-7396316)
chr7 (183-238)||(29327690-29327745)
chr7 (182-238)||(15148049-15148105)
chr7 (29-72)||(3132748-3132791)
chr7 (31-96)||(10234179-10234244)
chr7 (183-238)||(13392030-13392085)
chr7 (182-239)||(18258087-18258144)
chr7 (114-146)||(2653207-2653239)
chr7 (182-238)||(18560913-18560969)
[»] chr2 (9 HSPs)
chr2 (1-146)||(21330310-21330455)
chr2 (1-146)||(18796506-18796651)
chr2 (1-140)||(19692598-19692737)
chr2 (1-144)||(18619807-18619949)
chr2 (182-238)||(21330493-21330549)
chr2 (1-81)||(20977957-20978037)
chr2 (182-238)||(19692773-19692829)
chr2 (19-112)||(18822115-18822210)
chr2 (84-112)||(36270199-36270227)
[»] chr6 (29 HSPs)
chr6 (1-144)||(17684531-17684674)
chr6 (1-146)||(17691502-17691647)
chr6 (1-146)||(27381314-27381459)
chr6 (1-146)||(27471697-27471842)
chr6 (1-146)||(29308890-29309035)
chr6 (1-146)||(29315850-29315995)
chr6 (1-144)||(16566382-16566525)
chr6 (1-144)||(189039-189182)
chr6 (1-144)||(11651725-11651868)
chr6 (1-144)||(25537221-25537364)
chr6 (1-144)||(13359331-13359474)
chr6 (182-236)||(17691683-17691737)
chr6 (182-238)||(27381495-27381551)
chr6 (182-238)||(27471878-27471934)
chr6 (182-238)||(29308798-29308854)
chr6 (182-238)||(29315758-29315814)
chr6 (184-240)||(11651628-11651684)
chr6 (182-238)||(17684712-17684768)
chr6 (4-107)||(20553652-20553755)
chr6 (182-238)||(25537405-25537461)
chr6 (84-139)||(31258065-31258120)
chr6 (42-127)||(8509941-8510026)
chr6 (1-108)||(17850556-17850663)
chr6 (1-123)||(27925772-27925899)
chr6 (182-223)||(13359512-13359553)
chr6 (182-230)||(16566563-16566611)
chr6 (182-211)||(189221-189250)
chr6 (182-223)||(16394484-16394525)
chr6 (65-130)||(22259925-22259990)
[»] scaffold0390 (4 HSPs)
scaffold0390 (1-146)||(6996-7141)
scaffold0390 (1-146)||(14012-14157)
scaffold0390 (182-239)||(14193-14250)
scaffold0390 (182-238)||(7177-7233)
[»] scaffold0220 (2 HSPs)
scaffold0220 (1-146)||(18288-18433)
scaffold0220 (182-239)||(18195-18252)
[»] chr8 (17 HSPs)
chr8 (1-146)||(21940665-21940810)
chr8 (1-140)||(6094129-6094268)
chr8 (1-144)||(22171491-22171632)
chr8 (1-140)||(24642655-24642794)
chr8 (1-144)||(28554885-28555028)
chr8 (13-140)||(24636860-24636987)
chr8 (182-239)||(21940572-21940629)
chr8 (182-238)||(22070108-22070164)
chr8 (182-240)||(6094029-6094087)
chr8 (182-238)||(22171396-22171452)
chr8 (186-238)||(24642556-24642608)
chr8 (182-238)||(28554791-28554847)
chr8 (75-134)||(38232512-38232570)
chr8 (67-125)||(2375027-2375085)
chr8 (45-108)||(10920234-10920297)
chr8 (46-116)||(32872948-32873019)
chr8 (201-239)||(24636604-24636642)
[»] chr5 (19 HSPs)
chr5 (1-146)||(24695528-24695673)
chr5 (1-146)||(18569925-18570070)
chr5 (1-144)||(19714560-19714703)
chr5 (1-140)||(19707280-19707419)
chr5 (37-146)||(39537962-39538071)
chr5 (1-141)||(27347540-27347679)
chr5 (1-140)||(22547078-22547217)
chr5 (43-142)||(17285836-17285935)
chr5 (37-140)||(31886537-31886640)
chr5 (182-238)||(24695709-24695765)
chr5 (182-239)||(19714742-19714799)
chr5 (182-240)||(27347722-27347780)
chr5 (182-238)||(19707462-19707518)
chr5 (63-142)||(17299009-17299088)
chr5 (30-120)||(33477389-33477479)
chr5 (182-223)||(18570108-18570149)
chr5 (183-238)||(39537870-39537925)
chr5 (28-96)||(11479420-11479489)
chr5 (36-80)||(18807131-18807175)
[»] scaffold0433 (2 HSPs)
scaffold0433 (1-146)||(7107-7252)
scaffold0433 (182-238)||(7015-7071)
[»] scaffold0186 (2 HSPs)
scaffold0186 (1-146)||(26052-26197)
scaffold0186 (183-238)||(26231-26286)
[»] scaffold0657 (2 HSPs)
scaffold0657 (1-146)||(993-1138)
scaffold0657 (182-238)||(901-957)
[»] scaffold0063 (2 HSPs)
scaffold0063 (1-144)||(5531-5674)
scaffold0063 (182-230)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-144)||(230403-230545)
scaffold0008 (182-240)||(230584-230642)
[»] scaffold0176 (2 HSPs)
scaffold0176 (82-146)||(8446-8510)
scaffold0176 (182-238)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (182-238)||(23769-23825)
[»] scaffold0326 (2 HSPs)
scaffold0326 (182-238)||(16523-16579)
scaffold0326 (113-146)||(16615-16648)
[»] scaffold0637 (1 HSPs)
scaffold0637 (182-240)||(8942-9000)
[»] scaffold0705 (1 HSPs)
scaffold0705 (182-238)||(41-97)
[»] scaffold0170 (1 HSPs)
scaffold0170 (186-238)||(5878-5930)
[»] scaffold0565 (2 HSPs)
scaffold0565 (182-236)||(10202-10256)
scaffold0565 (96-127)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (202-239)||(1-38)
[»] scaffold0032 (1 HSPs)
scaffold0032 (45-117)||(92194-92267)


Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 237 - 443
Target Start/End: Complemental strand, 7143037 - 7142831
Alignment:
Q  237 cagagagatcattcttttgcaaatacaagagccttagatttttcaaactacttaaatctgggattgatccaattaacttgttttgagaaagatcaatata 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7143037 cagagagatcattcttttgcaaatacaagagccttagatttttcaaactacttaaatctgggattgatccaattaacttgttttgagaaagatcaatata 7142938  T
Q  337 ttcaagaatagacatgtttgaaaacatcccaattgggatctcaccttctaaaagattttcatccatacgaagggctagcaggtttgaaaacatcccaatt 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7142937 ttcaagaatagacatgtttgaaaacatcccaattgggatctcaccttctaaaagattttcaaccatacgaagggctagcaggtttgaaaacatcccaatt 7142838  T
Q  437 gaactag 443  Q
    |||||||    
T  7142837 gaactag 7142831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19926822 - 19926967
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926822 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 19926921  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19926922 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 19926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 26970608 - 26970463
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970608 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 26970509  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26970508 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 26970463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 5707465 - 5707320
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5707465 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatggactaactattctaggga 5707366  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5707365 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 5707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 26963785 - 26963640
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26963785 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatatttaatgttccattaaacggactaactattctaggga 26963686  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26963685 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 26963640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 55612828 - 55612683
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612828 ttgactacggatactttgagagtagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 55612729  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  55612728 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 55612683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 5714093 - 5713948
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5714093 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatgggctaactattctaggga 5713994  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5713993 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 5713948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18262357 - 18262214
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262357 ttgactacggatactttgagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 18262258  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  18262257 ctttattattttgaaacgaaacaaaatcaataaagaaatgcctt 18262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 868742 - 868597
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  868742 ttgactacggatactttgagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaatggactaactattctaggga 868643  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  868642 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10621395 - 10621540
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10621395 ttgactacagatactttgagaatagtttccttatgtttaatgggctctcacaattaagttatacttaatgttccattaaacggactaactattccaggga 10621494  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10621495 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 10621540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10628474 - 10628619
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10628474 ttgactacagatactttgagaatagtttccttatgtttaatgggctctcacaattaagttatacttaatgttccattaaacggactaactattccaggga 10628573  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10628574 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 10628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 28393196 - 28393339
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28393196 ttgactacagatactttaagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttaggga 28393295  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  28393296 ctttattattttgaaacaaatcaaaatcaataaagaaatgcctt 28393339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18269218 - 18269070
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269218 ttgactacggatactttgagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 18269119  T
Q  101 ctttattattttgaaacaaaac-----aaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||    
T  18269118 ctttattattttgaaacaaaacaaaacaaaatcaataaagaaatgcctt 18269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 4426666 - 4426808
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4426666 ttgactacggatactttaagaatagtt-ccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaagga 4426764  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4426765 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 4426808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 8845348 - 8845215
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8845348 ttgactacggatactttaagaatagtttccttatgtttaacgggatctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 8845249  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaa 134  Q
    ||||||||||||||||||||||||||||||||||    
T  8845248 ctttattattttgaaacaaaacaaaatcaataaa 8845215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 8858312 - 8858179
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858312 ttgactacggatactttaagaatagtttccttatgtttaacgggatctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 8858213  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaa 134  Q
    ||||||||||||||||||||||||||||||||||    
T  8858212 ctttattattttgaaacaaaacaaaatcaataaa 8858179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 12357251 - 12357136
Alignment:
Q  31 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357251 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 12357152  T
Q  131 taaagaaatgccttgt 146  Q
    ||||||||||||||||    
T  12357151 taaagaaatgccttgt 12357136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 20311427 - 20311299
Alignment:
Q  11 atactttgagaatagtttccttatgtttaatggggtctcacaattaagttatac-ttaatgttccattaaacggactaactattctagggactttattat 109  Q
    ||||||| | || ||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| |||  | |||||||| || | ||||||||||    
T  20311427 atactttaaaaacagtgtccttatgtttaatggggtctcacaattaagttataccttaatgctccattgaacatattaactattataagtactttattat 20311328  T
Q  110 tttgaaacaaaacaaaatcaataaagaaa 138  Q
    ||| |||||||||||||||||||||||||    
T  20311327 tttaaaacaaaacaaaatcaataaagaaa 20311299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 330
Target Start/End: Original strand, 4841722 - 4841815
Alignment:
Q  237 cagagagatcattcttttgcaaatacaagagccttagatttttcaaactacttaaatctgggattgatccaattaacttgttttgagaaagatc 330  Q
    ||||||||||||||| |||||||||||||| |||||||| ||| |||||||| || | |||||||| |||||||||||||||||||||||||||    
T  4841722 cagagagatcattctgttgcaaatacaagaaccttagatatttaaaactactcaactttgggattgctccaattaacttgttttgagaaagatc 4841815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 443
Target Start/End: Complemental strand, 5183132 - 5182929
Alignment:
Q  237 cagagagatcattcttttgcaaatacaagagccttagatttttcaaactacttaaatctgggattgatccaattaacttgttttgagaaagat-caatat 335  Q
    ||||||||||||||| |||||||||||||| |||||||  | |||||||||| || | |||||| |||||| ||||||||||||||||||||| ||| ||    
T  5183132 cagagagatcattctattgcaaatacaagaaccttagagatgtcaaactactgaactttgggatcgatccatttaacttgttttgagaaagatccaacat 5183033  T
Q  336 attcaagaatagacatgtttgaaaacatcccaattgggatctcaccttctaaaagattttcatccatacgaagggctagcaggtttgaaaacatcccaat 435  Q
     || |||||| | |||||| |||   ||| |||| ||||||||||||||||| |||||| |   |||| ||||| || |||  |  ||||||||||||||    
T  5183032 -ttgaagaatggccatgttggaa---atctcaatagggatctcaccttctaatagatttccggacataagaaggacttgcatatcagaaaacatcccaat 5182937  T
Q  436 tgaactag 443  Q
    ||||||||    
T  5182936 tgaactag 5182929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 237 - 387
Target Start/End: Complemental strand, 5214695 - 5214548
Alignment:
Q  237 cagagagatcattcttttgcaaatacaagagccttagatttttcaaactacttaaatctgggattgatccaattaacttgttttgagaaagatcaatata 336  Q
    ||||||||| |||||||||||||||||||| ||| |||  | |||||| |||||| | |||||||||||||||||||||||||||||||||||| | |      
T  5214695 cagagagattattcttttgcaaatacaagaacctaagaactgtcaaaccacttaactttgggattgatccaattaacttgttttgagaaagatccagaat 5214596  T
Q  337 ttcaagaatagacatgtttgaaaacatcccaattgggatctcaccttctaa 387  Q
    || |||| | |||||||| |||   ||| |||| |||||||||||||||||    
T  5214595 tttaagacttgacatgttggaa---atctcaatagggatctcaccttctaa 5214548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 35223663 - 35223576
Alignment:
Q  53 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||| | |||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  35223663 attaagtcacacttaatgctccattaaacagactaattattctagggactttattattttaaaacaaaacaaaatcaacaaagaaatg 35223576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 237 - 443
Target Start/End: Complemental strand, 5160891 - 5160687
Alignment:
Q  237 cagagagatcattcttttgcaaatacaagagccttagatttttcaaactacttaaatctgggattgatccaattaacttgttttg-agaaagat-caata 334  Q
    |||||||||||||||||||||||||||||| | |||||    ||||||||||||||  ||||||||||||| ||||||||||||| |||||||| ||| |    
T  5160891 cagagagatcattcttttgcaaatacaagaactttagagaagtcaaactacttaaaggtgggattgatccatttaacttgttttgaagaaagatccaaca 5160792  T
Q  335 tattcaagaatagacatgtttgaaaacatcccaattgggatctcaccttctaaaagattttcatccatacgaagggctagcaggtttgaaaacatcccaa 434  Q
    | ||||||| |  ||||||| |||||   | |||| ||||||||||||||||| |||||||||  |||   |||| ||  || ||| |||||| ||||||    
T  5160791 t-ttcaagactgaacatgttggaaaa---ctcaatagggatctcaccttctaatagattttcagacatgataaggacttccatgttagaaaacgtcccaa 5160696  T
Q  435 ttgaactag 443  Q
    |||||||||    
T  5160695 ttgaactag 5160687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 43 - 140
Target Start/End: Original strand, 5668230 - 5668327
Alignment:
Q  43 gggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||| ||||| | | |||||||| |||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  5668230 gggtctcacgattaaatcacacttaatgctccattaaatagactaattattctagagactttattattttgaaacaaaacaaaatcaacaaagaaatg 5668327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 5616358 - 5616215
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||| ||||||||||| |||||| | ||||   |||||| ||| |||||  ||| ||| | |||||||||||||  |||  |||||| |||| |||| |    
T  5616358 ttgacaacggatactttaagaataatgtcctctagtttaacgggatctcatgatttagtcagacttaatgttccaagaaatagactaattattttaggaa 5616259  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  5616258 ctttattattttgaaacaaaacaaaatgaataaagaaatgcctt 5616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10677615 - 10677753
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| |||||| | || ||  |||||||||| |||| | ||||||| |||||||||| ||||||| || |||||| |||| |||||     
T  10677615 ttgactacggatactttaagaataatatcatttcgtttaatggg-tctcgcgattaagtcatacttaatgctccattatacagactaattattttagggg 10677713  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||| | ||||||||||| |||||||||||| |||||    
T  10677714 ctttattttattgaaacaaaagaaaatcaataaaaaaatg 10677753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10891255 - 10891393
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| |||||| | || ||  |||||||||| |||| | ||||||| |||||||||| ||||||| || |||||| |||| |||||     
T  10891255 ttgactacggatactttaagaataatatcatttcgtttaatggg-tctcgcgattaagtcatacttaatgctccattatacagactaattattttagggg 10891353  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||| | ||||||||||| |||||||||||| |||||    
T  10891354 ctttattttattgaaacaaaagaaaatcaataaaaaaatg 10891393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 241 - 443
Target Start/End: Original strand, 4856223 - 4856422
Alignment:
Q  241 gagatcattcttttgcaaatacaagagccttagatttttcaaactacttaaatctgggattgatccaattaacttgttttgagaaagat-caatatattc 339  Q
    ||||| |||||||||||||||||||| ||| |||  | |||||| |||||| | |||||||| ||||| |||||||||||||||||||| ||| ||| |     
T  4856223 gagattattcttttgcaaatacaagaacctaagaactgtcaaaccacttaactttgggattgctccaactaacttgttttgagaaagatccaaaata-ta 4856321  T
Q  340 aagaatagacatgtttgaaaacatcccaattgggatctcaccttctaaaagattttcatccatacgaagggctagcaggtttgaaaacatcccaattgaa 439  Q
    |||| | |||||||| |||   ||| |||| |||||||||||||||||  ||||||||  ||||  |||||  | || ||| |||||| |||||||||||    
T  4856322 aagactggacatgttggaa---atctcaatagggatctcaccttctaattgattttcagacataacaagggaaaccatgttagaaaacttcccaattgaa 4856418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 5713912 - 5713856
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5713912 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 5713856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 19927003 - 19927059
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19927003 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 19927059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 26963604 - 26963548
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26963604 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 26963548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 26970427 - 26970371
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26970427 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 26970371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 5707284 - 5707226
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  5707284 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaacaga 5707226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 330
Target Start/End: Complemental strand, 5196538 - 5196445
Alignment:
Q  237 cagagagatcattcttttgcaaatacaagagccttagatttttcaaactacttaaatctgggattgatccaattaacttgttttgagaaagatc 330  Q
    |||||||| |||||| |||||||||||||| |||||||    |||||| |||||||  ||||||||||||| ||||||||||||||||||||||    
T  5196538 cagagagaccattctcttgcaaatacaagaaccttagaagagtcaaaccacttaaaggtgggattgatccatttaacttgttttgagaaagatc 5196445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 10621576 - 10621632
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  10621576 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 10621632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 12357100 - 12357044
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  12357100 catgatacaaagccaaatccaatcaatatagattggctattagggcttattccaaca 12357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 868561 - 868507
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaa 236  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  868561 catgatacaaagccaaacccaatcaatatagattggctattagggtttattccaa 868507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 55612650 - 55612593
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||    
T  55612650 catgatacaaagccaaacccaatcaatatagattggttattagggcttattctaacag 55612593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 10628655 - 10628711
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  10628655 catgatacaaagtcaaaaccaatcaatatagattggctattagggcttattccaaca 10628711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 17142372 - 17142428
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  17142372 catgatacaaagtcaaacccaatcaatatagattggctattagggctttttccaaca 17142428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 28393380 - 28393435
Alignment:
Q  184 tgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||    
T  28393380 tgatacaaagtcaaacccaatcaatatagattggctattagggcttactccaacag 28393435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 4426847 - 4426903
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||| |||||||||||||||||||||||||||||||| | |||| |||||||    
T  4426847 catgatacagagccaaacccaatcaatatagattggctattaggacttactccaaca 4426903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18269032 - 18268976
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  18269032 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaaca 18268976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 39074278 - 39074346
Alignment:
Q  30 cttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctag 97  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||||||    
T  39074278 cttatgtttaatggggtctcatgattaagtcatacttaatgttcaatttaaacggactaattattctag 39074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 443
Target Start/End: Complemental strand, 5173742 - 5173597
Alignment:
Q  295 tgggattgatccaattaacttgttttgagaaagat-caatatattcaagaatagacatgtttgaaaacatcccaattgggatctcaccttctaaaagatt 393  Q
    |||||||| |||||||||||||||||||||||||| ||| ||| | |||| | |||||||| |||   ||| |||| ||||||| |||||||||  ||||    
T  5173742 tgggattgctccaattaacttgttttgagaaagatccaaaata-taaagactggacatgttggaa---atctcaatagggatctgaccttctaattgatt 5173647  T
Q  394 ttcatccatacgaagggctagcaggtttgaaaacatcccaattgaactag 443  Q
    || |  |||| ||||| |   || ||| ||||||||||||||||||||||    
T  5173646 tttagacataagaaggacatacatgttagaaaacatcccaattgaactag 5173597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 5668371 - 5668412
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctatta 223  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  5668371 catgatacaaaaccaaacacaatcaatatagattggctatta 5668412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 55992729 - 55992680
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttat 231  Q
    |||||||||||| ||||||||||||||| | ||||||||||| |||||||    
T  55992729 catgatacaaagtcaaacccaatcaatacaaattggctattagggcttat 55992680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 18262176 - 18262136
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctatt 222  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  18262176 catgatacaaagccaaacccattcaacatagattggctatt 18262136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 21454235 - 21454319
Alignment:
Q  37 ttaatggggtctcacaattaagttatactt-aatgttccattaaacggactaactattctagggactttattattttgaaacaaa 120  Q
    ||||||||||||||  ||||||| | | || ||||||||||||| |  ||||||||||||| | ||||||||| |||||||||||    
T  21454235 ttaatggggtctcaatattaagtcacattttaatgttccattaatcaaactaactattctaagaactttattactttgaaacaaa 21454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 11161913 - 11161972
Alignment:
Q  37 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 96  Q
    ||||||| ||||||||||||||| | ||||  ||||||||||||| || |||||||||||    
T  11161913 ttaatggagtctcacaattaagtcacactttgtgttccattaaactgattaactattcta 11161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 20311261 - 20311207
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaa 236  Q
    ||||||||||||||||| ||||| |||| |||||||||||||  ||||| |||||    
T  20311261 catgatacaaagccaaatccaatgaatacagattggctattacagcttactccaa 20311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 5196412 - 5196335
Alignment:
Q  366 caattgggatctcaccttctaaaagattttcatccatacgaagggctagcaggtttgaaaacatcccaattgaactag 443  Q
    |||| |||||||||||||||||  |||||| |  |||| |||||||   || ||| ||||||||||||||||||||||    
T  5196412 caatagggatctcaccttctaattgatttttagacataagaagggcccacatgttagaaaacatcccaattgaactag 5196335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 8845166 - 8845125
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctatta 223  Q
    |||||||||||| ||||| ||||||| |||||||||||||||    
T  8845166 catgatacaaagtcaaactcaatcaacatagattggctatta 8845125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 8858130 - 8858089
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctatta 223  Q
    |||||||||||| ||||| ||||||| |||||||||||||||    
T  8858130 catgatacaaagtcaaactcaatcaacatagattggctatta 8858089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 146; Significance: 1e-76; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2383 - 2528
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2383 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 2482  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2483 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 2528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 11274 - 11419
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11274 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 11373  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11374 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 11419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 2564 - 2620
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2564 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 2620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 11455 - 11511
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11455 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 11511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 1e-76; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 6110209 - 6110064
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110209 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 6110110  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6110109 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 6110064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10572654 - 10572799
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572654 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 10572753  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10572754 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 10572799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 13211447 - 13211305
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211447 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 13211348  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcct 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13211347 ctttattattttgaaacaaaacaaaatcaataaagaaatgcct 13211305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 13248752 - 13248607
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248752 ttgactacgaatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 13248653  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13248652 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 13248607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15600946 - 15601091
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600946 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 15601045  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  15601046 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15601091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15607491 - 15607636
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607491 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 15607590  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  15607591 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 18640808 - 18640953
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18640808 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatggactaactattctaggga 18640907  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18640908 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18640953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16482545 - 16482688
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482545 ttgactacggatactttgagagtagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 16482644  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16482645 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 16482688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17781180 - 17781319
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781180 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 17781279  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17781280 ctttattattttgaaacaaaacaaaatcaataaagaaatg 17781319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18522808 - 18522665
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522808 ttgactacggatactttaagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 18522709  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18522708 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18522665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 8490633 - 8490488
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8490633 ttgactacagatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctaggga 8490534  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8490533 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 8490488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10579417 - 10579556
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10579417 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccatttaacggactaactattctaggga 10579516  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10579517 ctttattattttgaaacaaaacaaaatcaataaagaaatg 10579556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15357648 - 15357793
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15357648 ttgactacggatactttgagaataggttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactaatctaggga 15357747  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  15357748 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 15357793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 17200249 - 17200389
Alignment:
Q  4 actacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactt 103  Q
    |||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17200249 actacggatactttaagaatagtttcattatgtttaaaggggtatcacaattaagttatacttaatgttccattaaacggactaactattctagggactt 17200348  T
Q  104 tattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17200349 tattattttgaaacaaaacaaaatcaataaagaaatgcctt 17200389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19089807 - 19089946
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19089807 ttgactacggatactttaagaatagtttcattatgtttaaaggggtctcacaattaagttatacttaatgttccattaaacggactaactaatctaggga 19089906  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19089907 ctttattattttgaaacaaaacaaaatcaataaagaaatg 19089946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 18520105 - 18519980
Alignment:
Q  19 agaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaaca 118  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520105 agaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaaca 18520006  T
Q  119 aaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||    
T  18520005 aaacaaaatcaataaagaaatgcctt 18519980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 13516956 - 13516813
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  13516956 ttgactacagatactttaagaatcgtttccttatgtttaacggggtctcacaattaagttatacttaatgttccatgaaacagactaactattctaggga 13516857  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13516856 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 13516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15342281 - 15342407
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  15342281 ttgactacggatactttgagaataggttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgaacaaactattctaggga 15342380  T
Q  101 ctttattattttgaaacaaaacaaaat 127  Q
    |||||||||||||||||||||||||||    
T  15342381 ctttattattttgaaacaaaacaaaat 15342407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32056962 - 32057101
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||| ||||| ||||||||||| |||||||||| ||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  32056962 ttgactacggacactttaagaatagtttctttatgtttaacggggtcttacaataaagttatacttgatgttccattaaacagactaactattctaggga 32057061  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32057062 ctttattattttgaaacaaaacaaaatcaataaagaaatg 32057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 1647583 - 1647726
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtta----tacttaatgttccattaaacggactaactattcta 96  Q
    |||| |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||    
T  1647583 ttgattacggatactttaaaaatagtttccttatgtttaacggggtctcacaattaagttaattatacttaatgttccattaaacagactaactattcta 1647682  T
Q  97 gggactttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1647683 gggactttattattttgaaacaaaacaaaatcaataaagaaatg 1647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 16200270 - 16200128
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||    
T  16200270 ttgactacgaatactttaagaataatgtccttatgtttaatggggtctcacaattaagttatacataatgttccattaaacgaactaactattctaagga 16200171  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200170 ctttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 29925116 - 29924971
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||  ||| ||| |||||| | ||||||| |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||     
T  29925116 ttgactacatatattttaagaataatgtccttatatttaatggggtctcacaattaaattatacttaataatccattaaacggactaactattttagggg 29925017  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  29925016 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 29974269 - 29974124
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||  ||| ||| |||||| | ||||||| |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||     
T  29974269 ttgactacatatattttaagaataatgtccttatatttaatggggtctcacaattaaattatacttaataatccattaaacggactaactattttagggg 29974170  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  29974169 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 16200576 - 16200434
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||| ||||||| |||||| | |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  16200576 ttgactacgaatactttaagaataatgtccttatgtttattggagtctcacaattaagttatacataatgttccattaaacggactaactattctaagga 16200477  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200476 ctttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 24253460 - 24253589
Alignment:
Q  11 atactttgagaatagtttccttatgtttaatgggg-tctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattat 109  Q
    ||||||| |||||||| ||||||||||| |||||| |||||| ||||||| |||||||||||||||| ||||| || | |||||||| ||||||||||||    
T  24253460 atactttaagaatagtgtccttatgtttgatggggatctcacgattaagtcatacttaatgttccatcaaacgaacgagctattctaaggactttattat 24253559  T
Q  110 tttgaaacaaaacaaaatcaataaagaaat 139  Q
    ||||||  ||||||||||||||||||||||    
T  24253560 tttgaagtaaaacaaaatcaataaagaaat 24253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 18534820 - 18534758
Alignment:
Q  82 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18534820 ggactaactattctatggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18534758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 8490452 - 8490395
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8490452 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacag 8490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 6110028 - 6109972
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6110028 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 6109972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 13248571 - 13248515
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13248571 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 13248515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 18640989 - 18641047
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  18640989 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaacaga 18641047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 13211267 - 13211211
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  13211267 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaaca 13211211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 18510969 - 18510924
Alignment:
Q  99 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510969 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18510924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 17136193 - 17136137
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  17136193 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 17136137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 10579603 - 10579654
Alignment:
Q  188 acaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  10579603 acaaagtcaaacccaatcaatatagattggctattagggcttattccaacag 10579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 15607672 - 15607729
Alignment:
Q  182 catgatacaaagccaaacccaatcaa-tatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  15607672 catgatacaaagccaaacccaataaaatatagattggctattagggcttattccaaca 15607729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 16482727 - 16482783
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||    
T  16482727 catgatacaaagccaaacccaatcaatatagattgg-tattagggcttattctaacag 16482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 15351237 - 15351293
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||    
T  15351237 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 15351293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 15357829 - 15357885
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||    
T  15357829 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 15357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 17200427 - 17200483
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  17200427 catgctacaaagccaaacccaatcaacatagattggctattagggcttactccaaca 17200483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18519941 - 18519885
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||    
T  18519941 catgatacaaaaccaaacccaatcaatatagattggctattaggacttactccaaca 18519885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 10572840 - 10572890
Alignment:
Q  188 acaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  10572840 acaaagtcaaacccaatcaatataggttggctattagggcttattccaaca 10572890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 15601127 - 15601184
Alignment:
Q  182 catgatacaaagccaaacccaatcaa-tatagattggctattatggcttattccaaca 238  Q
    ||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||    
T  15601127 catgatacaaatccaaacccaataaaatatagattggctattagggcttattccaaca 15601184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 1647768 - 1647824
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||||||||||||||||||   ||||||| |||||| |||||||    
T  1647768 catgatacaaagccaaacccaatcaatatagaccagctattagggcttactccaaca 1647824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 13516775 - 13516719
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||| |||||||| ||||||| ||||||||||||||| |||||| |||||||    
T  13516775 catgatacacagccaaactcaatcaacatagattggctattagggcttactccaaca 13516719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 17781358 - 17781414
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||| ||| |||||| ||||||||||||||||||||||| |||||| |||||||    
T  17781358 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaaca 17781414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 19089985 - 19090041
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||| ||| |||||| ||||||||||||||||||||||| |||||| |||||||    
T  19089985 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaaca 19090041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 32057144 - 32057200
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||| ||||||||||||| |||||||||||||||  ||||| |||||||    
T  32057144 catgatacaaagtcaaacccaatcaacatagattggctattagagcttactccaaca 32057200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17136504 - 17136465
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaa 40  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  17136504 ttgactacggatactttaagaatagtttccttatgtttaa 17136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18510885 - 18510829
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||  ||||| ||||||||||||||||| ||||| |||||| |||||||    
T  18510885 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaaca 18510829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18522626 - 18522570
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||  ||||| ||||||||||||||||| ||||| |||||| |||||||    
T  18522626 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaaca 18522570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 18534719 - 18534671
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggctta 230  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||||||    
T  18534719 catgatacaaaaccaaactcaatcaatatagattgactattagggctta 18534671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 29924935 - 29924879
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||| | ||||| |||||||||||||| | |||||| |||||| |||||||    
T  29924935 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29924879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 29974088 - 29974032
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||| | ||||| |||||||||||||| | |||||| |||||| |||||||    
T  29974088 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 1e-76; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18252175 - 18252030
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252175 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 18252076  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18252075 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 18532576 - 18532721
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18532576 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgaactaactattctaggga 18532675  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18532676 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18532721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27131471 - 27131616
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131471 ttgactacaaatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 27131570  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27131571 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 27131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16359097 - 16359240
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359097 ttgactagggttactttaagaatagtttccttatgtttaacggggtctcacaattaagttattcttaatgttccattaaacagactaactattctaggga 16359196  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16359197 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 16359240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 21171295 - 21171438
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||    
T  21171295 ttgactacggatactttaagaatagtttccttatgttcaacggggtctcacaattaagttatatttaatgttccatgaaacggactaactattctaagga 21171394  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21171395 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 21171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 27310639 - 27310782
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27310639 ttgactactgatactttaagaatagtttccttatgttcaacgtggtctcacaattaagttatacttaatgttccattaaacggactaactattctaagga 27310738  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27310739 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 27310782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 3855981 - 3856126
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||  ||| ||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3855981 ttgactacaaatattttaagaataatgtccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgggctaactattctaggga 3856080  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||| |||||||||||||||||||||| || |||||||||||||||    
T  3856081 ctttgttattttgaaacaaaacaaaataaacaaagaaatgccttgt 3856126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36816695 - 36816834
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||| ||||||||| |||||| | ||||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  36816695 ttgactatggatactttaagaataatgtccttatgtttaacggagtctcacaattaatttatacttaatgttccattaaacagacgaactattctaggga 36816794  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  36816795 cttcattattttgaaacaaaacaaaatcaataaagaaatg 36816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 22657295 - 22657429
Alignment:
Q  13 actttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 112  Q
    ||||| ||||| || ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  22657295 actttaagaattgtgtccttatgtttaaaggggtctcacaattaagttatatttaatgttccattaaacagactaactattctaggaactttattatttt 22657394  T
Q  113 gaaacaaaac-aaaatcaataaagaaatgccttgt 146  Q
    |||||||||| |||||||||||||||||| |||||    
T  22657395 gaaacaaaacaaaaatcaataaagaaatgtcttgt 22657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 12006628 - 12006712
Alignment:
Q  28 tccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 112  Q
    ||||||||||| |||||||||||| ||||||  | ||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  12006628 tccttatgtttcatggggtctcacgattaaggcacacttaatattccattaaatagactaactattctagggactttattatttt 12006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18251992 - 18251936
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18251992 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 18532757 - 18532813
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18532757 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18532813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 27277682 - 27277756
Alignment:
Q  66 taatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||| ||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  27277682 taatgctccgttaaatggactaattattctagggacgttattattttgaaacaaaacaaaaacaacaaagaaatg 27277756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 27310821 - 27310879
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  27310821 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaacaga 27310879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 12014376 - 12014457
Alignment:
Q  31 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 112  Q
    |||||||||||||| ||| || ||||| ||| ||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  12014376 ttatgtttaatgggatctaacgattaatttacacttaatattccattaaacggactatgtattctagtgactttattatttt 12014457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 16359280 - 16359338
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||| |||||||||    
T  16359280 catgatacaaatcctaacccaatcaatatagattggctattagggcttactccaacaga 16359338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 30720625 - 30720694
Alignment:
Q  71 ttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    |||||||||||| ||||| ||||| ||| ||||||||||||| |||||||| |||| ||||||| |||||    
T  30720625 ttccattaaacgaactaattattccaggaactttattattttaaaacaaaataaaaccaataaaaaaatg 30720694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 21171479 - 21171535
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||| ||||| |||||||||||||||||  ||||| |||||||    
T  21171479 catgatacaaagccaaactcaatccatatagattggctattagagcttactccaaca 21171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 22657469 - 22657521
Alignment:
Q  186 atacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||| |||||||    
T  22657469 atacaaagccaaactcaatcaatatatattggctattaaggcttactccaaca 22657521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 3403325 - 3403248
Alignment:
Q  39 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 116  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3403325 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3403248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 3443494 - 3443571
Alignment:
Q  39 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 116  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3443494 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3443571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 36816881 - 36816926
Alignment:
Q  185 gatacaaagccaaacccaatcaatatagattggctattatggctta 230  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||    
T  36816881 gatacaaagccaaacccaatcaatatagattgaatattagggctta 36816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 3856164 - 3856220
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||| ||||||||||||| || |||||||||||| ||| || |||||||    
T  3856164 catgatacaaagtcaaacccaatcaagatggattggctattagggcctactccaaca 3856220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 27131652 - 27131705
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    ||||||||||||||||||||||     ||||||||||||||| |||||||||||||||    
T  27131652 catgatacaaagccaaacccaac----atagattggctattagggcttattccaacag 27131705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 9918071 - 9918106
Alignment:
Q  99 gactttattattttgaaacaaaacaaaatcaataaa 134  Q
    ||||||||||||||| ||||||||||||||||||||    
T  9918071 gactttattattttgtaacaaaacaaaatcaataaa 9918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 27277800 - 27277856
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||| |||||  ||| || ||||||||||||||| |||||| |||||||    
T  27277800 catgatacaaagtcaaacataattaacatagattggctattagggcttactccaaca 27277856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 29327929 - 29327784
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29327929 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaactgactaactattctaggga 29327830  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29327829 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 29327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 11536124 - 11536269
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11536124 ttgactacggatactttgagaataggttccttatgtttaatggggtctcacaattaagttgtacttaatgttccattaaacggactaactattctaggga 11536223  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11536224 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 11536269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 11543042 - 11543187
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543042 ttgactacggatactttgagaataggttccttatgtttaatggggtctgacaattaagttatacttaatgttccattaaacggactaactattctaggga 11543141  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  11543142 ctttattattttgaaacaaaacaaaatcaataaagaaatgcattgt 11543187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 15152588 - 15152445
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15152588 ttgactacggatactttaagaatagtttccgtatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaa 15152489  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  15152488 ctttattattttgaaacaaaacaaactcaataaagaaatgcctt 15152445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 12750971 - 12750828
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12750971 ttgactacggatactttaagaatagtttctttatgtttaacgaggtctcacaattaagttatacttaatgtttcattaaacggactaactattctaggga 12750872  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  12750871 ctttattactttgaaacaaaacaaaatcaataaagaaatgcctt 12750828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18561152 - 18561009
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  18561152 ttgactacagatactttaagaatagtttcctaatgtttaacggggtctcacagttaagttatacttaatgttccattaaacagactaactattctaggga 18561053  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18561052 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18561009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 15148287 - 15148144
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |    
T  15148287 ttgactacagatactttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttcaatcaaacggactaactattctaggaa 15148188  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  15148187 ctttattattttgaaacaaaacaaactcaataaagaaatgcctt 15148144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18257904 - 18258047
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| |||||| | ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  18257904 ttgactacggatactttaagaataatgtccttgtgtttaatggggtctcacaattaagtcatacttaatgttccattaaacagactaattattctaggga 18258003  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18258004 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12738681 - 12738542
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||    
T  12738681 ttgactacagatactttaagaatagtttccttatgtttaacaaggtctcacaattaagttataattaatgtttcattaaacaaactaactattctaggga 12738582  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  12738581 ctttattattttgaaacaaaataaaatcaataaagaaatg 12738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 13392295 - 13392157
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||  |||||||| |||||| | |||||   ||||||||| |||||| ||||||| | |||||||| |||||||| | |||||| | ||||||| |    
T  13392295 ttgactattgatactttaagaataatgtcctttcatttaatggg-tctcacgattaagtcacacttaatgctccattaagcagactaattgttctaggaa 13392197  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  13392196 ctttattattttgaaacaaaacaaagtcaacaaagaaatg 13392157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 39111905 - 39111819
Alignment:
Q  53 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    |||||||  ||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  39111905 attaagtcgtacttaatgtttcattaaacggactcgctattctagggactttatt-ttttgaaataaaacaaaattaataaagaaatg 39111819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 2653275 - 2653331
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  2653275 catgatacaaagccaatcccaatcaatatagattggctattagggcttattccaaca 2653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 11543223 - 11543279
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  11543223 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 11543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 12738499 - 12738443
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  12738499 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 12738443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 2365040 - 2364917
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||| ||| ||| |||||| | || ||  |||||||||| |||||| ||||||  | |||||||||||||||| |  |||||| |||||||| ||    
T  2365040 ttgactacgaatattttaagaataatgtcatttagtttaatgggttctcacgattaagccacacttaatgttccattagaaagactaattattctagaga 2364941  T
Q  101 ctttattattttgaaacaaaacaa 124  Q
    |||||||||||||||||| |||||    
T  2364940 ctttattattttgaaacataacaa 2364917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 11536305 - 11536361
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  11536305 catgatacaaagccaaaaccaatcaatatagagtggctattagggcttattccaaca 11536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 12750789 - 12750733
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  12750789 catgatacaaagccaaacccaatcaatatagattagctattagggcttactccaaca 12750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 15152406 - 15152350
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  15152406 catgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaaca 15152350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 7396316 - 7396221
Alignment:
Q  19 agaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttg 113  Q
    |||||| ||| |||||||||||| ||||||||  ||||||| ||||||||||||||| ||||| | |||||||||||||| ||| || ||||||||    
T  7396316 agaataattttcttatgtttaatagggtctcaagattaagtcatacttaatgttccatttaaatgaactaactattctagcgacatttttattttg 7396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 29327745 - 29327690
Alignment:
Q  183 atgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  29327745 atgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaaca 29327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 15148105 - 15148049
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||| |||||||    
T  15148105 catgatacaaaaccaaacccaattaatatagattggctattagggcttactccaaca 15148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 3132791 - 3132748
Alignment:
Q  29 ccttatgtttaatggggtctcacaattaagttatacttaatgtt 72  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  3132791 ccttatgtttaatggggtctcacaattaagttacacttaatgtt 3132748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 10234244 - 10234179
Alignment:
Q  31 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 96  Q
    |||||||||||||  |||||  ||||||||||| |||||| | |||||||||||||||||||||||    
T  10234244 ttatgtttaatggaatctcatgattaagttatatttaatggttcattaaacggactaactattcta 10234179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 13392085 - 13392030
Alignment:
Q  183 atgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| |||||| |||||||    
T  13392085 atgatacaaagtcaaacacaatcaatatagattggatattagggcttactccaaca 13392030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 18258087 - 18258144
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||| |||||| ||||||||| |||||||||||| | |||||| ||||||||    
T  18258087 catgatacaaggccaaaaccaatcaatctagattggctatcagggcttactccaacag 18258144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 2653207 - 2653239
Alignment:
Q  114 aaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||    
T  2653207 aaacaaaacaaaatcaataaagaaatgccttgt 2653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18560969 - 18560913
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||| ||||||||| |||||||| || | | |||||| |||||||    
T  18560969 catgatacaaagccaagcccaatcaacatagattgcctttaagggcttactccaaca 18560913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 2e-74; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 21330310 - 21330455
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330310 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 21330409  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  21330410 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 21330455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18796651 - 18796506
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||| ||| |||||| | |||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18796651 ttgactacagataatttaagaataatatccttatgttaaaagaggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 18796552  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||| |||||||||||||||||||||| || ||| |||| ||||||    
T  18796551 ctttgttattttgaaacaaaacaaaataaacaaataaattccttgt 18796506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19692598 - 19692737
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||| ||||||||| |||||| |||||||  |||||||| | |||||  ||||||| |  |||||||||||||||||| |||||| |||||||||||    
T  19692598 ttgactaaggatactttaagaataatttcctttagtttaatgagatctcatgattaagtcaggcttaatgttccattaaacagactaattattctaggga 19692697  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  19692698 cttcattattttgaaacaaaacaaaatcaataaagaaatg 19692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18619949 - 18619807
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||| || |||||||| |||||| | ||||| ||||||||||| ||||| |||||||| | |||||||| |||||||||| |||||| |||| ||||||    
T  18619949 ttgaccacagatactttaagaataatatccttttgtttaatggg-tctcataattaagtcacacttaatgctccattaaacagactaattattataggga 18619851  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  18619850 ctttattattttgaaacaaaacaaaatcaacaaagaaattcctt 18619807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 21330493 - 21330549
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21330493 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 21330549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20978037 - 20977957
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaac 81  Q
    ||||||||||||  ||| |||||| ||||||||| ||||||||| |||||  ||||| |||| ||||||||||||||||||    
T  20978037 ttgactacggatgttttaagaataatttccttatttttaatgggatctcatgattaaattattcttaatgttccattaaac 20977957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 19692773 - 19692829
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||| |||||| |||||||    
T  19692773 catgatacaaaaccaaacctaataaatacagattggctattaaggcttactccaaca 19692829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 18822210 - 18822115
Alignment:
Q  19 agaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgtt-ccatt-aaacggactaactattctagggactttattatttt 112  Q
    |||||||| ||||| |||||||||| ||||||| ||||||  | ||||||| || ||||| ||||| |||||| ||||||  ||||||||||||||    
T  18822210 agaatagtgtccttgtgtttaatggtgtctcacgattaagccacacttaatttttccatttaaacgaactaacaattctatagactttattatttt 18822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 112
Target Start/End: Complemental strand, 36270227 - 36270199
Alignment:
Q  84 actaactattctagggactttattatttt 112  Q
    |||||||||||||||||||||||||||||    
T  36270227 actaactattctagggactttattatttt 36270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 4e-73; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17684531 - 17684674
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684531 ttgactacggatactttgagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 17684630  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17684631 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 17684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 17691502 - 17691647
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691502 ttgactacggatactttaagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 17691601  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  17691602 ctttattattttgaaagaaaacaaaatcaataaagaaatgccttgt 17691647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27381314 - 27381459
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381314 ttgactatggatactttgagaatagtttccatatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 27381413  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27381414 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 27381459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27471697 - 27471842
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471697 ttgactatggatactttgagaatagtttccatatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 27471796  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27471797 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 27471842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 29309035 - 29308890
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29309035 ttgactacggatactttgagaatagtttccttatgtttaatgggctctcacaattaagttatacttaatgttccattaaatggactaactattctaggga 29308936  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29308935 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 29308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 29315995 - 29315850
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29315995 ttgactacggatactttgagaatagtttccttatgtttaatgggctctcacaattaagttatacttaatgttccattaaatggactaactattctaggga 29315896  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29315895 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 29315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16566382 - 16566525
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566382 ttgactacggatactttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 16566481  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16566482 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 16566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 189039 - 189182
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  189039 ttgactacaaatactttaagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaagga 189138  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  189139 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 189182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 11651868 - 11651725
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11651868 ttgactactgatacttttagaatagtttccttatttttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttaggga 11651769  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  11651768 ctttattattttgaaacaaatcaaaatcaataaagaaatgcctt 11651725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 25537221 - 25537364
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  25537221 ttgactacgaatactttaagaatagtttccttatgtttaacggggtctcacaataaagttatacttaatgttccattaaacggactaattattctaggga 25537320  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25537321 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 25537364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13359331 - 13359474
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| | |||| | |  ||||||||||||| || |||| |||||||||||||||||| |||||||| || |||||||||||||||||    
T  13359331 ttgactacggatactttaaaaataatgtttttatgtttaatggagtttcacgattaagttatacttaatgctccattaagcgaactaactattctaggga 13359430  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||| |||||| |||||||||    
T  13359431 ctttattattttgaaacaaaacaaaataaataaataaatgcctt 13359474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 17691683 - 17691737
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaa 236  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17691683 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 17691737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 27381495 - 27381551
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27381495 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 27381551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 27471878 - 27471934
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27471878 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 27471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 29308854 - 29308798
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  29308854 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 29308798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 29315814 - 29315758
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  29315814 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 29315758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 11651684 - 11651628
Alignment:
Q  184 tgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  11651684 tgatacaaagccaaactcaatcaatatagattggctattagggcttactccaacaga 11651628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 17684712 - 17684768
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  17684712 catgatacaaagccaaacccattcaacatagattggctattagggcttattccaaca 17684768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 20553652 - 20553755
Alignment:
Q  4 actacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactt 103  Q
    ||||||||| |||| |||||| | | ||||| ||||||||| |||||| |||||||  |||||||| || |||||||||||||| |||| |||| |||||    
T  20553652 actacggatgctttaagaataatattcttatatttaatgggatctcacgattaagtcgtacttaatatttcattaaacggactagctatcctagagactt 20553751  T
Q  104 tatt 107  Q
    ||||    
T  20553752 tatt 20553755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 25537405 - 25537461
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||| |||||||    
T  25537405 catgatacaaagccaaactcagtcaatatagattggctattagggcttaatccaaca 25537461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 31258065 - 31258120
Alignment:
Q  84 actaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 139  Q
    ||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  31258065 actaattattttagagactttattattttgaaacaaaacaaaagcaataaagaaat 31258120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 8510026 - 8509941
Alignment:
Q  42 ggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 127  Q
    ||||||||| ||||||||  ||| ||||||||||| |||  |||||| |||||||  |||||||||||||| |||||||| |||||    
T  8510026 ggggtctcataattaagtcgtacataatgttccatcaaatagactaattattctatagactttattattttaaaacaaaataaaat 8509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17850556 - 17850663
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||| ||||| ||| |||||||| ||||| | |||||| || | ||||||||||||  ||| ||||||||||  ||||  |||| ||||| ||||||    
T  17850556 ttgactatggataatttaagaatagtgtccttgtttttaattggatatcacaattaagtcttacataatgttccaacaaacaaactagctattataggga 17850655  T
Q  101 ctttatta 108  Q
    ||||||||    
T  17850656 ctttatta 17850663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 27925899 - 27925772
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatac--ttaat---gttccattaaacggactaactattct 95  Q
    |||||||  |||||||| |||||| ||| |||  ||||||||| ||||||| ||||||| | ||  |||||   ||||| ||||||  ||||  ||||||    
T  27925899 ttgactagagatactttaagaataattttctttagtttaatggagtctcacgattaagtcacacacttaattatgttccgttaaacatactagttattct 27925800  T
Q  96 agggactttattattttgaaacaaaaca 123  Q
    | ||||||||||||||||||||||||||    
T  27925799 aaggactttattattttgaaacaaaaca 27925772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 13359512 - 13359553
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctatta 223  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  13359512 catgatacaaagtcaaacccaatgaatatagattggctatta 13359553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 16566563 - 16566611
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggctta 230  Q
    |||||||||||| ||||| ||||||| ||||||||||||||| ||||||    
T  16566563 catgatacaaagtcaaactcaatcaacatagattggctattagggctta 16566611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 211
Target Start/End: Original strand, 189221 - 189250
Alignment:
Q  182 catgatacaaagccaaacccaatcaatata 211  Q
    ||||||||||||||||||||||||||||||    
T  189221 catgatacaaagccaaacccaatcaatata 189250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 16394484 - 16394525
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctatta 223  Q
    |||||||||||| ||||| |||||||||||||||| ||||||    
T  16394484 catgatacaaagtcaaactcaatcaatatagattgtctatta 16394525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 22259925 - 22259990
Alignment:
Q  65 ttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 130  Q
    ||||||||  |||||| ||||||  |||| |||||| |||||||||||| |||| |||||||||||    
T  22259925 ttaatgttatattaaatggactagttattttagggagtttattattttgcaacataacaaaatcaa 22259990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 138; Significance: 6e-72; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 6996 - 7141
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6996 ttgactacggatactttgagaatagtttccttatgtttaatagggtctcacagttaagttatacttaatgttccattaaacggactaactattctaggga 7095  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7096 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 14012 - 14157
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14012 ttgactacagatactttgagaatagtttccttatgtttaatggggtctcacagttaagttatacttaatgttccattaaacggactaactattgtaggga 14111  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14112 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 14193 - 14250
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    ||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||    
T  14193 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaacag 14250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 7177 - 7233
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  7177 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaaca 7233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 138; Significance: 6e-72; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18433 - 18288
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  18433 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttcaattaaatggactaactattctaggga 18334  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18333 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 18252 - 18195
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18252 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacag 18195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 6e-72; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21940810 - 21940665
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21940810 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaa 21940711  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21940710 ctttattattttgaaacaaaacaaaatcaataaagaaatgcattgt 21940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6094268 - 6094129
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094268 ttgactacagatactttaaaaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 6094169  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6094168 ctttattattttgaaacaaaacaaaatcaataaagaaatg 6094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22171632 - 22171491
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22171632 ttgactacggatactttgagaatagtttc--tatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctaggga 22171535  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  22171534 ctttattattttgaaataaaacaaaatcaataaggaaatgcctt 22171491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24642794 - 24642655
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24642794 ttgactacgaatactttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaacaattctaggga 24642695  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  24642694 ctttatgattttgaaacaaaacaaaatcaataaagaaatg 24642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 28555028 - 28554885
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  28555028 ttgactacggatacttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttaggta 28554929  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
     |||||||||||||||| ||||||||||||||||||||||||||    
T  28554928 ttttattattttgaaactaaacaaaatcaataaagaaatgcctt 28554885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 24636987 - 24636860
Alignment:
Q  13 actttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 112  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24636987 actttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaaaggactaactattctagggactttattatttt 24636888  T
Q  113 gaaacaaaacaaaatcaataaagaaatg 140  Q
    |||||||||||||||||| |||||||||    
T  24636887 gaaacaaaacaaaatcaagaaagaaatg 24636860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 21940629 - 21940572
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  21940629 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaacag 21940572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 22070164 - 22070108
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  22070164 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaaca 22070108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 6094087 - 6094029
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  6094087 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaacaga 6094029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 22171452 - 22171396
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  22171452 catgatacaaaatcaaacccaatcaatatagattggctattagggcttattccaaca 22171396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 24642608 - 24642556
Alignment:
Q  186 atacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  24642608 atacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 24642556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 28554847 - 28554791
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||||| |||||||    
T  28554847 catgatacaaagccaaacccaatcaacaaagattggctattagggcttactccaaca 28554791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 38232512 - 38232570
Alignment:
Q  75 attaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 134  Q
    ||||||| ||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  38232512 attaaacagactaactattctagaga-tttattattttgaaataaaacaaaatcaataaa 38232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 2375085 - 2375027
Alignment:
Q  67 aatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaa 125  Q
    ||||||||||||||  |||||| |||| |||||| ||||||||||||||||||||||||    
T  2375085 aatgttccattaaattgactaattattatagggagtttattattttgaaacaaaacaaa 2375027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 10920297 - 10920234
Alignment:
Q  45 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 108  Q
    ||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||| | |||||||    
T  10920297 gtctcacgattaactcatacttaatgttccattaaacagactaattattctaggaattttatta 10920234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 32872948 - 32873019
Alignment:
Q  46 tctcacaattaagttatacttaatgttccat-taaacggactaactattctagggactttattattttgaaa 116  Q
    |||||||||||||| ||||||||||||| || |||| |||  ||||||| || |||||||||||||||||||    
T  32872948 tctcacaattaagtcatacttaatgttctatataaatggatgaactattataaggactttattattttgaaa 32873019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 24636642 - 24636604
Alignment:
Q  201 caatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  24636642 caatcaatatagattggctattatggcttactccaacag 24636604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 6e-72; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24695528 - 24695673
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695528 ttgactacggatacttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 24695627  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24695628 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 24695673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 18569925 - 18570070
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18569925 ttgactacggatactttaagagtagtttccttatgtttaacggggtctcacaattaagttatacttaatgttcaattaaacggactaactattctaggga 18570024  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  18570025 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 18570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 19714560 - 19714703
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||| |||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714560 ttgacttcggatattttaagaatagattccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 19714659  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    |||||||| ||||||| |||||||||||||||||||||||||||    
T  19714660 ctttattactttgaaataaaacaaaatcaataaagaaatgcctt 19714703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19707280 - 19707419
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||| |||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19707280 ttgacttcggatattttaagaatagattccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaactgactaactattctaggga 19707379  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  19707380 ctttattactttgaaataaaacaaaatcaataaagaaatg 19707419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 39538071 - 39537962
Alignment:
Q  37 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 136  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| |  |||||||||||||||||||||| ||||||    
T  39538071 ttaatgaggtctcacaattaagttatacttaatgttccattaaacgaaccaactattctaaggacttaaccattttgaaacaaaacaaaatcattaaaga 39537972  T
Q  137 aatgccttgt 146  Q
    |||| |||||    
T  39537971 aatggcttgt 39537962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 27347540 - 27347679
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||  ||||||| |||||| | |||||  |||||||||| |||||| ||||||| | |||||||| |||||||||| || ||| ||||||| |||    
T  27347540 ttgactacatatactttaagaataatgtcctttcgtttaatggg-tctcacgattaagtcacacttaatgctccattaaacagattaattattctaagga 27347638  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgc 141  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  27347639 ctttattattttgaatcaaaacaaaatcaacaaagaaatgc 27347679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22547078 - 22547217
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||| || ||||||| | |||| | ||| ||| ||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |     
T  22547078 ttgactgcgaatactttaaaaataatgtccatatatttaatgagatctcacgattaagttatacttaatgttccattaaaccgactaactattatagcgg 22547177  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatg 140  Q
     ||||||||||| ||| |||||||||| |||||| |||||    
T  22547178 ttttattattttaaaataaaacaaaatgaataaataaatg 22547217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 17285836 - 17285935
Alignment:
Q  43 gggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 142  Q
    |||| |||| ||||||| | ||||||||||||||||||| |||||||||||||  |||  |||||||||||||||| ||||||||||||||| |||||||    
T  17285836 gggtttcacgattaagtcacacttaatgttccattaaacagactaactattctctggagattattattttgaaacataacaaaatcaataaataaatgcc 17285935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 31886640 - 31886537
Alignment:
Q  37 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 136  Q
    ||||||| ||||||| |||||||  ||||| |||||| |||||| | ||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  31886640 ttaatggagtctcacgattaagtcgtacttgatgttcaattaaatgaactaattattctaaggactttattaatttgaaacaaaacaaaatcactaaaga 31886541  T
Q  137 aatg 140  Q
    ||||    
T  31886540 aatg 31886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 24695709 - 24695765
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24695709 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 24695765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 19714742 - 19714799
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  19714742 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaacag 19714799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 27347722 - 27347780
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  27347722 catgatacaaagccaaacgcaatcaatatagattggctattagggcttactccaacaga 27347780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 19707462 - 19707518
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  19707462 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 19707518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 17299009 - 17299088
Alignment:
Q  63 acttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 142  Q
    ||||||||||||||||| |||||||||||||||  |||  |||||||||  ||||| ||||||||||||||| |||||||    
T  17299009 acttaatgttccattaatcggactaactattctctggatattattatttataaacataacaaaatcaataaataaatgcc 17299088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 33477389 - 33477479
Alignment:
Q  30 cttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaa 120  Q
    |||||| |||||| |||||||| ||||  | | |||||||| |||||||| | | ||||||||| || |||||||||||||||||||||||    
T  33477389 cttatgattaatgaggtctcacgattagatcacacttaatgatccattaatcagcctaactattgtaaggactttattattttgaaacaaa 33477479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 18570108 - 18570149
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctatta 223  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  18570108 catgatacaaagccaaacccaattaatatagattagctatta 18570149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 39537925 - 39537870
Alignment:
Q  183 atgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||| |||| || |||| ||||||||||||||| |||||| |||||||    
T  39537925 atgatacaaagctaaactcagtcaacatagattggctattagggcttaatccaaca 39537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 11479489 - 11479420
Alignment:
Q  28 tccttatgtttaatg-gggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 96  Q
    ||||||||||||||| |||||||||||| |||| | ||||||| || ||||||||  ||||| |||||||    
T  11479489 tccttatgtttaatgagggtctcacaatcaagtcacacttaatatttcattaaacacactaattattcta 11479420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 18807131 - 18807175
Alignment:
Q  36 tttaatggggtctcacaattaagttatacttaatgttccattaaa 80  Q
    |||||||| ||||||| ||||||| | ||||||||||||||||||    
T  18807131 tttaatggtgtctcacgattaagtcacacttaatgttccattaaa 18807175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 7252 - 7107
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7252 ttgactacggatacttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttctattaaacggactaactattctaggga 7153  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  7152 ctttattattttgaaacaaaacaaaatcaataaagaaataccttgt 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 7071 - 7015
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7071 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 7015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26052 - 26197
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||    
T  26052 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatatttaatgttccattaaatggactaactattctaagga 26151  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  26152 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 26231 - 26286
Alignment:
Q  183 atgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  26231 atgatacaaagccaaacccaatcaatatagattgactattagggcttattccaaca 26286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 126; Significance: 8e-65; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 1138 - 993
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  1138 ttgactacagatactttgagaatagtttctttatgtttaatggggtctcacaattaagttatacttaatgtttcattaaacggactaactattttaggga 1039  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  1038 ctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 957 - 901
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  957 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 116; Significance: 8e-59; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 5674 - 5531
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||  ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5674 ttgactacatatactttaagaataatttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 5575  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  5574 ctttattattttgaaacaaaaataaatcaataaagaaatgcctt 5531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 5492 - 5444
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggctta 230  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  5492 catgatacaaagccaaacccaaacaatatagattggctattagggctta 5444  T

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Target: scaffold0008 (Bit Score: 108; Significance: 5e-54; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 230403 - 230545
Alignment:
Q  1 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 100  Q
    ||||||||  ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || | |    
T  230403 ttgactacaaatactttaagaatggtttccttatgtttaa-ggggtctcacaattaagttatacttaatgttccattaaacggactaactattataagaa 230501  T
Q  101 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  230502 ctttattattttgaaacaaaacaaaatcaataaagaaatgcctt 230545  T

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Target: scaffold0008; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 230584 - 230642
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  230584 catgatacaaagccaaacccaatcaatatagattggctattattgcttactccaacaga 230642  T

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Target: scaffold0176 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 8446 - 8510
Alignment:
Q  82 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8446 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 8510  T

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Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 8546 - 8602
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8546 catgatacaaagccgaacccaatcaatatagattggctattagggcttattccaaca 8602  T

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Target: scaffold0203 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 23769 - 23825
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23769 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 23825  T

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Target: scaffold0326 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 16579 - 16523
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16579 catgatataaagccaaacccaatcaatatagattggctattagggcttattccaaca 16523  T

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Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 146
Target Start/End: Complemental strand, 16648 - 16615
Alignment:
Q  113 gaaacaaaacaaaatcaataaagaaatgccttgt 146  Q
    ||| ||||||||||||||||||||||||||||||    
T  16648 gaancaaaacaaaatcaataaagaaatgccttgt 16615  T

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Target: scaffold0637 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 9000 - 8942
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaacaga 240  Q
    ||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||||    
T  9000 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaacaga 8942  T

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Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 41 - 97
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||    
T  41 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 97  T

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Target: scaffold0170 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 5930 - 5878
Alignment:
Q  186 atacaaagccaaacccaatcaatatagattggctattatggcttattccaaca 238  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||| |||||||    
T  5930 atacaaagtcaaactcaatcaatatagattggctattatgacttactccaaca 5878  T

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Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 10202 - 10256
Alignment:
Q  182 catgatacaaagccaaacccaatcaatatagattggctattatggcttattccaa 236  Q
    |||||||||||| ||||| |||||||||||||||||||||||  ||||| |||||    
T  10202 catgatacaaagtcaaactcaatcaatatagattggctattagagcttactccaa 10256  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 10127 - 10158
Alignment:
Q  96 agggactttattattttgaaacaaaacaaaat 127  Q
    ||||||||||||||||||||||||||||||||    
T  10127 agggactttattattttgaaacaaaacaaaat 10158  T

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Target: scaffold0767 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 1 - 38
Alignment:
Q  202 aatcaatatagattggctattatggcttattccaacag 239  Q
    |||||||||||||||||||||| |||||||||||||||    
T  1 aatcaatatagattggctattagggcttattccaacag 38  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 92267 - 92194
Alignment:
Q  45 gtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttgaaac 117  Q
    ||||||| ||||||||||||||||||||||| |||||   ||||  |||||||| |||||||||| ||| ||||    
T  92267 gtctcacgattaagttatacttaatgttccatttaaaataactagatattctagagactttattactttaaaac 92194  T

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